Rroxscaffold_7G00162310
MYB Family

Myb-related protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0006637
Physical Location & Seq
Reverse (-)
4879821 .. 4886282
6462 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00162310.1

Sequence Viewer

Length: 3147 bp
ATGGACGGTGACAGAACTAATTCTACTCCAGAAGGGTCGGGTGGTGACAGTATTCAGAGAGCTCGAGCTCTCCATGGGAGGTCTAGTGGGCCTACGAGGCGTTCTACAAAAGGACAATGGACGCCTGAAGAGGATGAAATCTTGCGTAGGGCAGTTCAGAGTTTTAAAGGAAAGAATTGGAAGAAAATAGCGGAGTGTTTCAAGGATCGGACTGATGTGCAATGCCTGCATAGGTGGCAGAAAGTTTTGAATCCTGAATTGGTCAAGGGTCCATGGTCTAAAGAGGAGGACGAAATTATTGTTGAATTGGTCAAAAAGTATGGCCCAAAAAAGTGGTCCACTATTGCACAGCATTTACCTGGACGTATTGGTAAGCAATGCAGGGAAAGGTGGCATAATCATCTTAATCCTGGCATAAACAAAGAAGCATGGACGCAGGATGAGGAGTTGGCTCTGATTCGTGCTCATCAAATTTATGGGAACAAATGGGCAGAGCTAACAAAATTCTTGCCAGGAAGGACAGACAACGCTATAAAAAATCACTGGAACAGTTCTGTGAAAAAGAAGTTGGATTCTTACTTGAAGTCGGGATTACTACCAGACTTAGAAGGAACGCCTCATGTTGGACACCAAAACCAACCCATAATCTCTTGTTCAAGAGTTCAGAATAGCGGAGATGATAGTGCTCCCAGAGGTGCTGAAGGAGAAGAAATATCAGAATGCAGTCAAGATTCAAATGTTGCTGGTTGCTTTCAGTCTGGAACTGAAATGGTCAATGTGGTATTACATACTAGAGATCGATCGCATATACGTGAAGTATCCCGGTTAGGAAATGACCCAAGCTCCAGTCCAGCATCCTGTTCAGAACCATATTACCCGTCTATGGGGGATGCCACTTTTTCCATCCCAGAAATACCTCCTGAAATTGTTAGCTCTTCCAAATTTATAGAGCAGAGTTTCTCACATGATGCTGGAGAGTCAATGAGTGGGGATTTCCAGTTTAATATGCAGGAGTTAACTAATATTGCTTCACTAGAATCAGAGCAGGAGGCATCCGGGATGCATACCCATTGTATGAGTTCTAATGAGATCCATGATGTGGTCAACTTTCCATTTCAGACTGCTGGTGCATTTCCTGCTTCTACTTCCATGGGGAATATGGCGGATGGTTCAGTTAAATCAGAGCGGATGTTGATATCTGACGATGAATGTTGCAGGGCTTTGTTTTCTGAGGCAATAAATCAGGGATATTTCTCTAGAGATTTTACAAATGGGTTAAACATGGTTGATTTGATTGCATGCACAGATTCATTACTTTTACAATCGTCGTCAAACCTCCAGATGTCTGAAACCGGTAGATCTTCTCAACTTTATTGTCCTTTGAACTCAGATGTAGTTGGAACTTCATGCTCTCAACCAGTTTCTGCTCATAATGGTCCACTGATATTTGCTGGAGAGGCTAATAATTTATTCAGAGTTCAAGAACCGGAGTATGTCACAAATTCAGAGGATGGATTTGTCTACACTAATGACACTGCCAGATCTCCCAGCAATGTTGTTGGAAATGAGACTAGAATGCAAGAGCAATCTGATCTGGTTGAGGATCCTTCAAATTTAGTCCCTGTAAATACATTTGATTCGGGATTGGACACGCAAACTTCTCCTTCTCTGGATGTGAGATCAGATGTGCACACAGAACAGCAGGATGACGGAGCTCTATGTTATGAGCCTCCTCGTTTTCCGAGTTTGGATATTCCATTTTTAAGTTGTGATCTTGTACAATCAGGAAATGACATGCAACAAGAATATAGTCCCCTTGGAATTCGTCAGCTGATGATGTCCTCTATGAATTGCCTTACTCCATTTAGGTTATGGGATTCACCATCTCGCGATGGTAGCCCTGATGCTGTGCTGAAAAGTGCTGCTAAAACATTTACAGGCACACCATCCATTTTGAAGAAACGGCACCGTGACCTGTTGTCTCCATTGTCGCCATTGTCGGATAGAAGGATTGATAAAAAGCTTGGGACTGACGTGACCTCCAGTTTGGCCAGAGATTTTTCACGTTTAGAGGTAATGTTTGAAGACAGTGAGACACAGGAGGCACCATTGCATTATCCATCTTCAAATCAGCAGAGGACCTCTGATGCGCATGAAGAAGACAAAGAGAATATGGACACCTGTGAAACCAGAATAGAAGAAGGGATTGCAATATCAGCTGATGAAATAGCACAGAAACACTTTGATGACAGTGAATCCCAGGAAAAGATGAAGCAAGGAAATACTGCTGTTGATGCTAAGACTAAGGCTGATGCTGTCCCCTCTTCTCACGATGCACAACAGTCTTCTGGAGTTCTTGCTGAACATAACACAAATGATCTGCTATTGTATTCTCCTGATCAAGCTGGTTGTAAAGCTGAAAAAGCCTTGAGTTTGAGTGCTGGAACTCCAAAAGTACAGCATAGTAAATCTTTTTCTGCCAAACAATGTTCCTCTGTTATTACTCCAACTATAACAGTGAAGAAGCGAGAAAGTTATTTGGTTGCACAGACATGTATACAATCTGATTTGTTGTCAGCTCCCCTGGAGACAACTAGTGATAATGCTGGGAATGGTGCTAGTACTGAGACCATATTCGGTGTTACACCACTTAAAAGAAGTATTGATTCCCCTTCAGCATGGAAATCCCCTTCAGCGTGGAAATCTCCTTCAGCATGGAAATCCCCCTGGTTTATCAACTCCTTTCTTCCTGGTCCAAGGGTTGATACAGAAATAACAATTGAGGATATAGGATTTTTCATGAGCCCAGGAGATAGAAGTTATGATGCCATAGGGTTGATGAAACAGATAAGCGAGCATACTGCTTCTGCATATGCCAATGCCCAGGAAGTTTTGGGAAATGAAACTCCTGAGTCATTGTTGAAGGAAAGACGGAAAGACCATGGCATTGTGGACTTGGATAAGAATCTTGCACCACCAAATCAGCCGGGGAGTAGTTCCCTTTCCGCACCAAATGTTGTGGTGGAGCGCCGCACCCTTGACTTTAGCGAGTGTGAAACACCTGGGAAGGGAAAAGAAAGCGGAAAATTCTCAAATACTAAAAGCTTCTCAAGTCCATCTAGCTATTTGTTGAAGGGATGCAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001101 GO:0001134 GO:0001135 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0003712 GO:0003713 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006275 GO:0006355 GO:0006357 GO:0008150 GO:0008285 GO:0009605 GO:0009607 GO:0009608 GO:0009610 GO:0009620 GO:0009623 GO:0009719 GO:0009725 GO:0009751 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010564 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0014070 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0032465 GO:0032502 GO:0032875 GO:0042127 GO:0042221 GO:0042493 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0046677 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048585 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051302 GO:0051704 GO:0051707 GO:0051726 GO:0060255 GO:0065007 GO:0080090 GO:0090329 GO:0097159 GO:0140110 GO:1901181 GO:1901363 GO:1901700 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:2000112 GO:2000113 GO:2001023 GO:2001024 GO:2001038 GO:2001039 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04151 ko04218 ko05166 map04151 map04218 map05166
Pfam Domains
Protein Families
Myb_DNA-binding

Protein Analysis

1048

Amino Acids

115.27

Weight (kDa)

5.16

Isoelectric Point (pI)

59.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-binding PF00249 37 - 83 6.2e-16 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 40 - 98 3.7e-17 Myb-like DNA-binding domain
Myb_DNA-binding PF00249 89 - 135 1.4e-20 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 92 - 149 5.8e-19 Myb-like DNA-binding domain
Myb_DNA-binding PF00249 141 - 184 5.8e-15 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 144 - 189 3.8e-07 Myb-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 2151
AccB1I GGYRCC 2 cut(s) 1965, 2104
AccB7I CCANNNNNTGG 1 cut(s) 1099
AccBSI CCGCTC 1 cut(s) 1186
AccI GTMKAC 2 cut(s) 1521, 2557
AccII CGCG 1 cut(s) 1890
AciI CCGC 7 cut(s) 191, 672, 1163, 1186, 3006, 3031, 3081
AclWI GGATC 4 cut(s) 213, 1084, 1598, 1611
AcoI YGGCCR 1 cut(s) 2049
AcsI RAATTY 7 cut(s) 471, 503, 941, 1501, 1612, 1821, 3086
AcuI CTGAAG 5 cut(s) 147, 720, 2658, 2676, 2694
AcyI GRCGYC 1 cut(s) 122
AfaI GTAC 3 cut(s) 1779, 2457, 2623
AfiI CCNNNNNNNGG 5 cut(s) 623, 883, 884, 1099, 3068
AflIII ACRYGT 1 cut(s) 2552
AgeI ACCGGT 1 cut(s) 1352
AhdI GACNNNNNGTC 1 cut(s) 1978
AhlI ACTAGT 1 cut(s) 2594
AjiI CACGTC 1 cut(s) 2035
AjuI GAANNNNNNNTTGG 4 cut(s) 242, 274, 551, 583
Alw21I GWGCWC 6 cut(s) 64, 70, 466, 688, 1692, 1717
Alw26I GTCTC 5 cut(s) 1562, 1986, 2087, 2582, 2621
Alw44I GTGCAC 1 cut(s) 1688
AlwI GGATC 4 cut(s) 213, 1084, 1598, 1611
AlwNI CAGNNNCTG 1 cut(s) 1424
Ama87I CYCGRG 1 cut(s) 63
AoxI GGCC 3 cut(s) 89, 322, 2049
ApaLI GTGCAC 1 cut(s) 1688
ApeKI GCWGC 1 cut(s) 1922
ApoI RAATTY 7 cut(s) 471, 503, 941, 1501, 1612, 1821, 3086
ArsI GACNNNNNNTTYG 4 cut(s) 320, 352, 2029, 2061
AsiGI ACCGGT 1 cut(s) 1352
Asp700I GAANNNNTTC 1 cut(s) 19
AspLEI GCGC 2 cut(s) 2152, 3030
AspS9I GGNCC 7 cut(s) 89, 269, 323, 336, 1436, 2139, 2753
AsuC2I CCSGG 3 cut(s) 823, 1057, 2988
AsuHPI GGTGA 3 cut(s) 20, 56, 1872
AvaI CYCGRG 1 cut(s) 63
AvaII GGWCC 5 cut(s) 269, 336, 1436, 2139, 2753
BaeGI GKGCMC 1 cut(s) 1692
BalI TGGCCA 1 cut(s) 2051
BamHI GGATCC 1 cut(s) 1603
BanI GGYRCC 2 cut(s) 1965, 2104
BanII GRGCYC 4 cut(s) 64, 70, 1717, 2807
BbsI GAAGAC 3 cut(s) 2091, 2166, 2337
Bbv12I GWGCWC 6 cut(s) 64, 70, 466, 688, 1692, 1717
BbvI GCAGC 1 cut(s) 1909
BccI CCATC 8 cut(s) 911, 1160, 1505, 1886, 1891, 1954, 2128, 3124
BceAI ACGGC 1 cut(s) 1979
BcgI CGANNNNNNTGC 2 cut(s) 2843, 2877
BciVI GTATCC 1 cut(s) 829
BclI TGATCA 1 cut(s) 2398
BcnI CCSGG 3 cut(s) 823, 1057, 2988
BcoDI GTCTC 5 cut(s) 1562, 1986, 2087, 2582, 2621
BcuI ACTAGT 1 cut(s) 2594
BfaI CTAG 8 cut(s) 84, 792, 1034, 1257, 1572, 2595, 2619, 3120
BfoI RGCGCY 1 cut(s) 3031
BfuI GTATCC 1 cut(s) 829
BglI GCCNNNNNGGC 1 cut(s) 97
BglII AGATCT 2 cut(s) 1358, 1541
BisI GCNGC 2 cut(s) 1923, 3031
BlsI GCNGC 2 cut(s) 1924, 3032
BmcAI AGTACT 1 cut(s) 2623
Bme18I GGWCC 5 cut(s) 269, 336, 1436, 2139, 2753
BmeRI GACNNNNNGTC 1 cut(s) 1978
BmeT110I CYCGRG 1 cut(s) 63
BmgBI CACGTC 1 cut(s) 2035
BmgT120I GGNCC 7 cut(s) 89, 269, 323, 336, 1436, 2139, 2753
BmiI GGNNCC 4 cut(s) 270, 1605, 1967, 2106
BpiI GAAGAC 3 cut(s) 2091, 2166, 2337
BpmI CTGGAG 8 cut(s) 12, 829, 993, 1322, 1473, 2026, 2370, 2606
BpuEI CTTGAG 2 cut(s) 2449, 3094
BpuMI CCSGG 3 cut(s) 823, 1057, 2988
Bsa29I ATCGAT 1 cut(s) 799
BsaAI YACGTR 1 cut(s) 812
BsaBI GATNNNNATC 1 cut(s) 2964
BsaHI GRCGYC 1 cut(s) 122
BsaI GGTCTC 1 cut(s) 2621
BsaWI WCCGGW 2 cut(s) 1352, 1486
BsaXI ACNNNNNCTCC 6 cut(s) 70, 100, 827, 857, 2024, 2054
Bsc4I CCNNNNNNNGG 5 cut(s) 623, 883, 884, 1099, 3068
Bse118I RCCGGY 1 cut(s) 1352
Bse1I ACTGG 5 cut(s) 548, 846, 997, 1418, 2043
Bse3DI GCAATG 4 cut(s) 227, 383, 1558, 2108
Bse8I GATNNNNATC 1 cut(s) 2964
BseCI ATCGAT 1 cut(s) 799
BseJI GATNNNNATC 1 cut(s) 2964
BseLI CCNNNNNNNGG 5 cut(s) 623, 883, 884, 1099, 3068
BseMI GCAATG 4 cut(s) 227, 383, 1558, 2108
BseMII CTCAG 4 cut(s) 1221, 1401, 2616, 2901
BseNI ACTGG 5 cut(s) 548, 846, 997, 1418, 2043
BseRI GAGGAG 3 cut(s) 299, 458, 1722
BseSI GKGCMC 1 cut(s) 1692
BseXI GCAGC 1 cut(s) 1909
BseYI CCCAGC 2 cut(s) 1547, 2606
Bsh1236I CGCG 1 cut(s) 1890
Bsh1285I CGRYCG 1 cut(s) 803
BshFI GGCC 3 cut(s) 91, 324, 2051
BshNI GGYRCC 2 cut(s) 1965, 2104
BshTI ACCGGT 1 cut(s) 1352
BshVI ATCGAT 1 cut(s) 799
BsiEI CGRYCG 1 cut(s) 803
BsiHKAI GWGCWC 6 cut(s) 64, 70, 466, 688, 1692, 1717
BsiHKCI CYCGRG 1 cut(s) 63
BsiSI CCGG 5 cut(s) 823, 1056, 1353, 1487, 2987
BslFI GGGAC 4 cut(s) 1604, 1797, 2041, 2303
BslI CCNNNNNNNGG 5 cut(s) 623, 883, 884, 1099, 3068
BsmAI GTCTC 5 cut(s) 1562, 1986, 2087, 2582, 2621
BsmFI GGGAC 4 cut(s) 1604, 1797, 2041, 2303
BsmI GAATGC 2 cut(s) 725, 1581
BsnI GGCC 3 cut(s) 91, 324, 2051
Bso31I GGTCTC 1 cut(s) 2621
BsoBI CYCGRG 1 cut(s) 63
Bsp1286I GDGCHC 7 cut(s) 64, 70, 466, 688, 1692, 1717, 2807
Bsp1407I TGTACA 1 cut(s) 1777
Bsp19I CCATGG 4 cut(s) 73, 272, 1149, 2941
Bsp68I TCGCGA 1 cut(s) 1890
BspACI CCGC 7 cut(s) 191, 672, 1163, 1186, 3006, 3031, 3081
BspANI GGCC 3 cut(s) 91, 324, 2051
BspCNI CTCAG 4 cut(s) 1222, 1400, 2617, 2902
BspDI ATCGAT 1 cut(s) 799
BspFNI CGCG 1 cut(s) 1890
BspHI TCATGA 1 cut(s) 2799
BspLI GGNNCC 4 cut(s) 270, 1605, 1967, 2106
BspPI GGATC 4 cut(s) 213, 1084, 1598, 1611
BspQI GCTCTTC 1 cut(s) 940
BspT107I GGYRCC 2 cut(s) 1965, 2104
BspTNI GGTCTC 1 cut(s) 2621
BsrBI CCGCTC 1 cut(s) 1186
BsrDI GCAATG 4 cut(s) 227, 383, 1558, 2108
BsrFI RCCGGY 1 cut(s) 1352
BsrGI TGTACA 1 cut(s) 1777
BsrI ACTGG 5 cut(s) 548, 846, 997, 1418, 2043
BssAI RCCGGY 1 cut(s) 1352
BssNAI GTATAC 1 cut(s) 2558
BssNI GRCGYC 1 cut(s) 122
BssT1I CCWWGG 6 cut(s) 73, 272, 1149, 1816, 2756, 2941
Bst1107I GTATAC 1 cut(s) 2558
Bst4CI ACNGT 8 cut(s) 8, 50, 551, 1970, 2090, 2252, 2343, 2518
Bst6I CTCTTC 3 cut(s) 123, 940, 2329
BstACI GRCGYC 1 cut(s) 122
BstAPI GCANNNNNTGC 2 cut(s) 226, 1136
BstAUI TGTACA 1 cut(s) 1777
BstBAI YACGTR 1 cut(s) 812
BstC8I GCNNGC 3 cut(s) 227, 1300, 2855
BstDEI CTNAG 7 cut(s) 604, 1230, 1387, 2298, 2304, 2625, 2910
BstDSI CCRYGG 4 cut(s) 73, 272, 1149, 2941
BstFNI CGCG 1 cut(s) 1890
BstH2I RGCGCY 1 cut(s) 3031
BstHHI GCGC 2 cut(s) 2152, 3030
BstMAI GTCTC 5 cut(s) 1562, 1986, 2087, 2582, 2621
BstMCI CGRYCG 1 cut(s) 803
BstMWI GCNNNNNNNGC 9 cut(s) 97, 226, 235, 1136, 1457, 1896, 2216, 2294, 2423
BstNSI RCATGY 3 cut(s) 1302, 1798, 2556
BstSLI GKGCMC 1 cut(s) 1692
BstUI CGCG 1 cut(s) 1890
BstV1I GCAGC 1 cut(s) 1909
BstV2I GAAGAC 3 cut(s) 2091, 2166, 2337
BstX2I RGATCY 4 cut(s) 1089, 1358, 1541, 1603
BstXI CCANNNNNNTGG 1 cut(s) 333
BstYI RGATCY 4 cut(s) 1089, 1358, 1541, 1603
BstZ17I GTATAC 1 cut(s) 2558
Bsu15I ATCGAT 1 cut(s) 799
BsuI GTATCC 1 cut(s) 829
BsuRI GGCC 3 cut(s) 91, 324, 2051
BsuTUI ATCGAT 1 cut(s) 799
BtgI CCRYGG 4 cut(s) 73, 272, 1149, 2941
BtgZI GCGATG 1 cut(s) 1905
BtrI CACGTC 1 cut(s) 2035
BtsI GCAGTG 1 cut(s) 1533
BtsIMutI CAGTG 6 cut(s) 541, 1439, 1533, 2095, 2257, 2523
BtuMI TCGCGA 1 cut(s) 1890
Cac8I GCNNGC 3 cut(s) 227, 1300, 2855
CaiI CAGNNNCTG 1 cut(s) 1424
CciI TCATGA 1 cut(s) 2799
CfoI GCGC 2 cut(s) 2152, 3030
Cfr10I RCCGGY 1 cut(s) 1352
Cfr13I GGNCC 7 cut(s) 89, 269, 323, 336, 1436, 2139, 2753
ClaI ATCGAT 1 cut(s) 799
CseI GACGC 2 cut(s) 130, 442
Csp6I GTAC 3 cut(s) 1778, 2456, 2622
CspAI ACCGGT 1 cut(s) 1352
CspCI CAANNNNNGTGG 2 cut(s) 3000, 3035
CviQI GTAC 3 cut(s) 1778, 2456, 2622
DdeI CTNAG 7 cut(s) 604, 1230, 1387, 2298, 2304, 2625, 2910
DraI TTTAAA 1 cut(s) 166
DriI GACNNNNNGTC 1 cut(s) 1978
EaeI YGGCCR 1 cut(s) 2049
Eam1104I CTCTTC 3 cut(s) 123, 940, 2329
Eam1105I GACNNNNNGTC 1 cut(s) 1978
EarI CTCTTC 3 cut(s) 123, 940, 2329
EciI GGCGGA 1 cut(s) 1178
Ecl136II GAGCTC 3 cut(s) 62, 68, 1715
Eco130I CCWWGG 6 cut(s) 73, 272, 1149, 1816, 2756, 2941
Eco24I GRGCYC 4 cut(s) 64, 70, 1717, 2807
Eco31I GGTCTC 1 cut(s) 2621
Eco32I GATATC 1 cut(s) 1197
Eco47I GGWCC 5 cut(s) 269, 336, 1436, 2139, 2753
Eco53kI GAGCTC 3 cut(s) 62, 68, 1715
Eco57I CTGAAG 5 cut(s) 147, 720, 2658, 2676, 2694
Eco88I CYCGRG 1 cut(s) 63
EcoICRI GAGCTC 3 cut(s) 62, 68, 1715
EcoO109I RGGNCCY 1 cut(s) 2139
EcoRI GAATTC 1 cut(s) 1821
EcoRV GATATC 1 cut(s) 1197
EcoT14I CCWWGG 6 cut(s) 73, 272, 1149, 1816, 2756, 2941
EcoT22I ATGCAT 1 cut(s) 1065
EcoT38I GRGCYC 4 cut(s) 64, 70, 1717, 2807
ErhI CCWWGG 6 cut(s) 73, 272, 1149, 1816, 2756, 2941
FaqI GGGAC 4 cut(s) 1604, 1797, 2041, 2303
FauNDI CATATG 1 cut(s) 2872
FbaI TGATCA 1 cut(s) 2398
FblI GTMKAC 2 cut(s) 1521, 2557
Fnu4HI GCNGC 2 cut(s) 1923, 3031
FriOI GRGCYC 4 cut(s) 64, 70, 1717, 2807
Fsp4HI GCNGC 2 cut(s) 1923, 3031
FspAI RTGCGCAY 1 cut(s) 2151
FspBI CTAG 8 cut(s) 84, 792, 1034, 1257, 1572, 2595, 2619, 3120
FspI TGCGCA 1 cut(s) 2151
GlaI GCGC 2 cut(s) 2151, 3029
GluI GCNGC 2 cut(s) 1923, 3031
GsaI CCCAGC 2 cut(s) 1551, 2610
GsuI CTGGAG 8 cut(s) 12, 829, 993, 1322, 1473, 2026, 2370, 2606
HaeII RGCGCY 1 cut(s) 3031
HaeIII GGCC 3 cut(s) 91, 324, 2051
HapII CCGG 5 cut(s) 823, 1056, 1353, 1487, 2987
HgaI GACGC 2 cut(s) 130, 442
HhaI GCGC 2 cut(s) 2152, 3030
Hin1I GRCGYC 1 cut(s) 122
Hin6I GCGC 2 cut(s) 2150, 3028
HinP1I GCGC 2 cut(s) 2150, 3028
HincII GTYRAC 2 cut(s) 1017, 1105
HindII GTYRAC 2 cut(s) 1017, 1105
HindIII AAGCTT 2 cut(s) 2021, 3103
HpaI GTTAAC 1 cut(s) 1017
HpaII CCGG 5 cut(s) 823, 1056, 1353, 1487, 2987
HphI GGTGA 3 cut(s) 20, 56, 1872
Hpy166II GTNNAC 8 cut(s) 339, 1017, 1105, 1439, 1522, 1690, 2558, 2953
Hpy8I GTNNAC 8 cut(s) 339, 1017, 1105, 1439, 1522, 1690, 2558, 2953
Hpy99I CGWCG 1 cut(s) 1330
HpyCH4III ACNGT 8 cut(s) 8, 50, 551, 1970, 2090, 2252, 2343, 2518
HpyCH4IV ACGT 4 cut(s) 364, 811, 2034, 2065
HpyF10VI GCNNNNNNNGC 9 cut(s) 97, 226, 235, 1136, 1457, 1896, 2216, 2294, 2423
HpyF3I CTNAG 7 cut(s) 604, 1230, 1387, 2298, 2304, 2625, 2910
HpySE526I ACGT 4 cut(s) 364, 811, 2034, 2065
Hsp92I GRCGYC 1 cut(s) 122
HspAI GCGC 2 cut(s) 2150, 3028
Ksp22I TGATCA 1 cut(s) 2398
KspAI GTTAAC 1 cut(s) 1017
LguI GCTCTTC 1 cut(s) 940
LmnI GCTCC 5 cut(s) 691, 848, 1712, 2584, 3025
Lsp1109I GCAGC 1 cut(s) 1909
MaeI CTAG 8 cut(s) 84, 792, 1034, 1257, 1572, 2595, 2619, 3120
MaeII ACGT 4 cut(s) 364, 811, 2034, 2065
MaeIII GTNAC 6 cut(s) 8, 44, 1495, 1970, 2035, 2641
MbiI CCGCTC 1 cut(s) 1186
MfeI CAATTG 1 cut(s) 2778
MflI RGATCY 4 cut(s) 1089, 1358, 1541, 1603
MhlI GDGCHC 7 cut(s) 64, 70, 466, 688, 1692, 1717, 2807
MlsI TGGCCA 1 cut(s) 2051
MluNI TGGCCA 1 cut(s) 2051
MlyI GAGTC 2 cut(s) 986, 2921
MmeI TCCRAC 6 cut(s) 549, 604, 1378, 1540, 1980, 2531
Mox20I TGGCCA 1 cut(s) 2051
Mph1103I ATGCAT 1 cut(s) 1065
MroXI GAANNNNTTC 1 cut(s) 19
MscI TGGCCA 1 cut(s) 2051
MseI TTAA 8 cut(s) 165, 405, 1002, 1016, 1176, 1277, 1763, 2652
MslI CAYNNNNRTG 3 cut(s) 810, 2244, 2551
Msp20I TGGCCA 1 cut(s) 2051
MspA1I CMGCKG 2 cut(s) 1831, 2219
MspI CCGG 5 cut(s) 823, 1056, 1353, 1487, 2987
MunI CAATTG 1 cut(s) 2778
Mva1269I GAATGC 2 cut(s) 725, 1581
MvnI CGCG 1 cut(s) 1890
MwoI GCNNNNNNNGC 9 cut(s) 97, 226, 235, 1136, 1457, 1896, 2216, 2294, 2423
NciI CCSGG 3 cut(s) 823, 1057, 2988
NcoI CCATGG 4 cut(s) 73, 272, 1149, 2941
NdeI CATATG 1 cut(s) 2872
NlaIV GGNNCC 4 cut(s) 270, 1605, 1967, 2106
NmuCI GTSAC 5 cut(s) 8, 44, 1495, 1970, 2035
NruI TCGCGA 1 cut(s) 1890
NsbI TGCGCA 1 cut(s) 2151
NsiI ATGCAT 1 cut(s) 1065
NspI RCATGY 3 cut(s) 1302, 1798, 2556
PaeI GCATGC 1 cut(s) 1302
PaeR7I CTCGAG 1 cut(s) 63
PagI TCATGA 1 cut(s) 2799
PciI ACATGT 1 cut(s) 2552
PciSI GCTCTTC 1 cut(s) 940
PctI GAATGC 2 cut(s) 725, 1581
PdmI GAANNNNTTC 1 cut(s) 19
PflMI CCANNNNNTGG 1 cut(s) 1099
PfoI TCCNGGA 1 cut(s) 1055
PinAI ACCGGT 1 cut(s) 1352
PkrI GCNGC 2 cut(s) 1924, 3032
Ple19I CGATCG 1 cut(s) 803
PleI GAGTC 2 cut(s) 985, 2920
PpsI GAGTC 2 cut(s) 985, 2920
Ppu21I YACGTR 1 cut(s) 812
PpuMI RGGWCCY 1 cut(s) 2139
PscI ACATGT 1 cut(s) 2552
Psp124BI GAGCTC 3 cut(s) 64, 70, 1717
Psp5II RGGWCCY 1 cut(s) 2139
PspFI CCCAGC 2 cut(s) 1547, 2606
PspN4I GGNNCC 4 cut(s) 270, 1605, 1967, 2106
PspPI GGNCC 7 cut(s) 89, 269, 323, 336, 1436, 2139, 2753
PspPPI RGGWCCY 1 cut(s) 2139
PspXI VCTCGAGB 1 cut(s) 63
PsrI GAACNNNNNNTAC 2 cut(s) 7, 39
PstNI CAGNNNCTG 1 cut(s) 1424
PsuI RGATCY 4 cut(s) 1089, 1358, 1541, 1603
PvuI CGATCG 1 cut(s) 803
PvuII CAGCTG 2 cut(s) 1831, 2219
RruI TCGCGA 1 cut(s) 1890
RsaI GTAC 3 cut(s) 1779, 2457, 2623
RsaNI GTAC 3 cut(s) 1778, 2456, 2622
RseI CAYNNNNRTG 3 cut(s) 810, 2244, 2551
SacI GAGCTC 3 cut(s) 64, 70, 1717
SapI GCTCTTC 1 cut(s) 940
SaqAI TTAA 8 cut(s) 165, 405, 1002, 1016, 1176, 1277, 1763, 2652
SatI GCNGC 2 cut(s) 1923, 3031
Sau96I GGNCC 7 cut(s) 89, 269, 323, 336, 1436, 2139, 2753
ScaI AGTACT 1 cut(s) 2623
SchI GAGTC 2 cut(s) 986, 2921
SduI GDGCHC 7 cut(s) 64, 70, 466, 688, 1692, 1717, 2807
Sfr274I CTCGAG 1 cut(s) 63
SinI GGWCC 5 cut(s) 269, 336, 1436, 2139, 2753
SlaI CTCGAG 1 cut(s) 63
SmiMI CAYNNNNRTG 3 cut(s) 810, 2244, 2551
SmlI CTYRAG 3 cut(s) 63, 2428, 3109
SmoI CTYRAG 3 cut(s) 63, 2428, 3109
SpeI ACTAGT 1 cut(s) 2594
SphI GCATGC 1 cut(s) 1302
SsiI CCGC 7 cut(s) 191, 672, 1163, 1186, 3006, 3031, 3081
SspI AATATT 1 cut(s) 1024
SspMI CTAG 8 cut(s) 84, 792, 1034, 1257, 1572, 2595, 2619, 3120
SstI GAGCTC 3 cut(s) 64, 70, 1717
StyI CCWWGG 6 cut(s) 73, 272, 1149, 1816, 2756, 2941
TaaI ACNGT 8 cut(s) 8, 50, 551, 1970, 2090, 2252, 2343, 2518
TaiI ACGT 4 cut(s) 367, 814, 2037, 2068
TaqI TCGA 2 cut(s) 64, 799
TatI WGTACW 3 cut(s) 1777, 2455, 2621
TauI GCSGC 1 cut(s) 3033
Tru1I TTAA 8 cut(s) 165, 405, 1002, 1016, 1176, 1277, 1763, 2652
Tru9I TTAA 8 cut(s) 165, 405, 1002, 1016, 1176, 1277, 1763, 2652
TscAI CASTG 6 cut(s) 548, 1446, 1540, 2095, 2257, 2523
TseFI GTSAC 5 cut(s) 8, 44, 1495, 1970, 2035
TseI GCWGC 1 cut(s) 1922
Tsp45I GTSAC 5 cut(s) 8, 44, 1495, 1970, 2035
TspGWI ACGGA 2 cut(s) 1725, 2947
TspRI CASTG 6 cut(s) 548, 1446, 1540, 2095, 2257, 2523
Van91I CCANNNNNTGG 1 cut(s) 1099
VneI GTGCAC 1 cut(s) 1688
VpaK11BI GGWCC 5 cut(s) 269, 336, 1436, 2139, 2753
XapI RAATTY 7 cut(s) 471, 503, 941, 1501, 1612, 1821, 3086
XbaI TCTAGA 1 cut(s) 1256
XceI RCATGY 3 cut(s) 1302, 1798, 2556
XcmI CCANNNNNNNNNTGG 2 cut(s) 1156, 1869
XhoI CTCGAG 1 cut(s) 63
XmiI GTMKAC 2 cut(s) 1521, 2557
XmnI GAANNNNTTC 1 cut(s) 19
XspI CTAG 8 cut(s) 84, 792, 1034, 1257, 1572, 2595, 2619, 3120
ZrmI AGTACT 1 cut(s) 2623
Zsp2I ATGCAT 1 cut(s) 1065
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.