Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0014352

Physical Location & Seq

Genomic Coordinates Reverse (-)

27538671 .. 27540260

Gene Structure 1590 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g37970.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1590 bp

ATGGCCGCCTTAACCAAATCAAACCTCCCTCTCCGCCGCTTTCTCTCTCCTCTCTCCCAACGACTTCTCAATCCCTCTTCTTTCTCTTCAGCTCCAGAGCCTCATCTCCAAGACGAAAACGACACTTCCCAAACTGCCCCCACCGAAGAAACCCTAATCGCCGACACATTCCACTCCCTAATCAAAGACCACCACCGCAACAACCCTAACCCTAATCCCAACCCCGCTCCTCCAAACCCTACCTACACCATCCCTTCTCTCTCCTCCGACTTCTCCCAGCTCTCCGCCGCCGGCTCCGTTTCTCCGGCCGTCGTCCGCCGCGTCCTCGAGAAATGCGGCGCCGTCCGCCACGGCATCCCCGTCCTCCAGGCCGTCGCGTTCTTCAACTGGGCCACGTCACGTGAGGGTTTCGAGCACAATCCGGAGCCTTACAACGAAATGGTCGACCTCGCCGGAAAGGTGAGGCAATTCGATTTGGCTTGGCACGTGATCGACTTGATGAAAGCTCGGAATGTTGAGATTACTGTGGAGACATTCTCGATTCTTGTGCGGCGGTATGTCAGGGCCGGACTGGCTGCGGAGGCAGTGCACGCGTTTAACCGTATGGAGGAGTATGGTGTCAGTCCGGATAGGATTGCATTCTCGGTTGTGATTGGGATTCTCTGTAAGAAGAGAAGGGCAAGTGAAGCGCAGGCGTTTTTCGATAGCTTGAAGCATAAGTTTGAGGCTGATGTGATTCTGTACACTAGCTTGGTTAATGGTTGGTGTAGGGCTGGGAATATTGCGGAGGCAGAGAGGGTGTTTAATGAGATGAAGGCTGCGGGGATTGAGCCAAATGTGTATAGTTACAGCATTGTGATCGATGCATTGTGTAGGTGCGGACAGATTACTCGCGCTCATGATGTGTTTGCGGAGATGATTGATGCGGGTTGCAATCCGAATTCAATCACTTTTAACAATCTAATGAGAGTTCATGTGAAGGCTGGAAGAACAGAAAAGGTGTTGCAGGTTTATAATCAGATGAAGAGGCTGGGATGCAATGCGGATGTCATTACTTATAATTTTCTCATAGAGTGTCATTGTAAGGATGAGAATGTTGAAGAGGCTGCTAAGGTGCTGAATTTGATGGTGAAGAAAGGCTGCAGCCCTAATGCATCGACTTTCAATCCTATATTTCGGTGCATTGCAAAGCTGAAGGATGTGAATGGTGCTCACAGGATGTATACCAAGATGAAAGATTTGGATTGCAAGGCGAACACAGTGACCTACAATGTGTTAATGCAGATGTTTGCCGAGTCAAAGTCTACTGACATGGTGCTCAAGCTGAAGAAGGAGATGGATGAGAATGAAGTGGAGCCTAACGTGAACACGTATAAGGTCTTGATCTCTATGTATTGTGCAATGGGGCACTGGAACAATGCTTACAAGTTTTTTAGGGAGATGATTGAGGAGAAATGCTTAAAACCGAGTATGCCTGTTTATGAGATGGTTCTGAAGCAGTTGAGGAATGCAGGACAGTTGAAGAAACATGAGGAATTGGTGGAAAAAATGGTTGACAGGGGATTTGTTACCCGGCCATTGGCAGTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

530

Amino Acids

59.7

Weight (kDa)

8.28

Isoelectric Point (pI)

39.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	144 - 186	9.5e-06	PPR repeat family
TPR_24	PF23276	149 - 238	3.9e-07	Fungal tetratrico peptide repeats
PPR_3	PF13812	163 - 221	3.7e-06	Pentatricopeptide repeat domain
PPR_long	PF17177	231 - 336	3.8e-10	Pentacotripeptide-repeat region of PRORP
TPR_24	PF23276	237 - 341	6.5e-07	Fungal tetratrico peptide repeats
PPR_3	PF13812	240 - 289	7.1e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	242 - 272	8.1e-11	PPR repeat
PPR_2	PF13041	244 - 292	1.4e-17	PPR repeat family
PPR	PF01535	247 - 276	4.8e-07	PPR repeat
PPR_1	PF12854	275 - 306	2.7e-09	PPR repeat
PPR_3	PF13812	275 - 326	1.2e-08	Pentatricopeptide repeat domain
PPR	PF01535	281 - 311	2.7e-06	PPR repeat
PPR_2	PF13041	283 - 323	4e-10	PPR repeat family
PPR_2	PF13041	313 - 357	1.2e-12	PPR repeat family
PPR	PF01535	316 - 346	2.2e-06	PPR repeat
TPR_24	PF23276	328 - 442	3.6e-12	Fungal tetratrico peptide repeats
PPR_long	PF17177	332 - 411	3.5e-06	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	337 - 395	4.5e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	345 - 377	1.1e-09	PPR repeat
PPR_2	PF13041	349 - 397	3.7e-14	PPR repeat family
PPR	PF01535	351 - 381	1.1e-06	PPR repeat
PPR_2	PF13041	383 - 431	2.9e-09	PPR repeat family
PPR_long	PF17177	396 - 520	4.9e-09	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	419 - 466	1.2e-11	PPR repeat family
PPR_3	PF13812	441 - 499	6.6e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	450 - 481	1.5e-08	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014352)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20300
fragaria_vesca	FvH4_2g37970
prunus_persica	Prupe.1G359600_v2.0.a1
pyrus_communis	pycom08g00640 pycom15g00550
rosa_chinensis	RchiOBHm_Chr6g0303651
rosa_laevigata	RLG00000011063
rosa_multiflora	Rmu_co8419065.1_g000001 Rmu_sc0013443.1_g000006 Rmu_ssc0000114.1_g000016
rosa_roxburghii	Rroxscaffold_7G00164520
rosa_rugosa	Rorug06G0323400
rosa_samantha	Rh6AG437700 Rh6BG465400 Rh6CG449800 Rh6DG436600
rosa_wichuraiana	Rw6G037890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1014, 1059
Acc36I	ACCTGC	1 cut(s)	997
AccB1I	GGYRCC	1 cut(s)	338
AccBSI	CCGCTC	1 cut(s)	227
AccI	GTMKAC	3 cut(s)	444, 1223, 1304
AccII	CGCG	4 cut(s)	321, 377, 593, 894
AccIII	TCCGGA	2 cut(s)	421, 625
AcoI	YGGCCR	3 cut(s)	3, 306, 1574
AcsI	RAATTY	2 cut(s)	940, 1120
AcuI	CTGAAG	4 cut(s)	72, 1214, 1346, 1514
AcvI	CACGTG	2 cut(s)	401, 487
AcyI	GRCGYC	1 cut(s)	339
AfaI	GTAC	1 cut(s)	743
AfiI	CCNNNNNNNGG	2 cut(s)	607, 1579
AflIII	ACRYGT	2 cut(s)	591, 1368
AgsI	TTSAA	6 cut(s)	385, 712, 945, 1100, 1165, 1522
AjiI	CACGTC	1 cut(s)	396
AjnI	CCWGG	1 cut(s)	366
AluBI	AGCT	7 cut(s)	92, 280, 506, 708, 750, 1192, 1324
AluI	AGCT	7 cut(s)	92, 280, 506, 708, 750, 1192, 1324
Alw21I	GWGCWC	4 cut(s)	417, 591, 1213, 1320
Alw26I	GTCTC	1 cut(s)	524
Alw44I	GTGCAC	1 cut(s)	587
Ama87I	CYCGRG	1 cut(s)	326
Aor13HI	TCCGGA	2 cut(s)	421, 625
AoxI	GGCC	6 cut(s)	3, 306, 369, 390, 564, 1574
ApaLI	GTGCAC	1 cut(s)	587
ApeKI	GCWGC	5 cut(s)	575, 818, 1106, 1140, 1143
ApoI	RAATTY	2 cut(s)	940, 1120
ArsI	GACNNNNNNTTYG	2 cut(s)	1547, 1579
AspLEI	GCGC	3 cut(s)	341, 691, 896
AspS9I	GGNCC	2 cut(s)	390, 564
AsuC2I	CCSGG	1 cut(s)	1573
AsuHPI	GGTGA	2 cut(s)	472, 1141
AvaI	CYCGRG	1 cut(s)	326
BaeGI	GKGCMC	2 cut(s)	591, 1410
BanI	GGYRCC	1 cut(s)	338
BbrPI	CACGTG	2 cut(s)	401, 487
Bbv12I	GWGCWC	4 cut(s)	417, 591, 1213, 1320
BbvI	GCAGC	5 cut(s)	562, 805, 1093, 1127, 1155
BccI	CCATC	4 cut(s)	257, 1120, 1330, 1480
BceAI	ACGGC	4 cut(s)	293, 326, 356, 367
BcgI	CGANNNNNNTGC	4 cut(s)	529, 563, 841, 875
BciT130I	CCWGG	1 cut(s)	368
BcnI	CCSGG	1 cut(s)	1573
BcoDI	GTCTC	1 cut(s)	524
BfaI	CTAG	2 cut(s)	747, 1588
BfmI	CTRYAG	1 cut(s)	1141
BfoI	RGCGCY	1 cut(s)	342
BfuAI	ACCTGC	1 cut(s)	997
BglI	GCCNNNNNGGC	1 cut(s)	572
Bme1390I	CCNGG	2 cut(s)	368, 1573
BmeT110I	CYCGRG	1 cut(s)	326
BmgBI	CACGTC	1 cut(s)	396
BmgT120I	GGNCC	2 cut(s)	390, 564
BmiI	GGNNCC	4 cut(s)	295, 340, 426, 1356
BmrFI	CCNGG	2 cut(s)	368, 1573
BmrI	ACTGGG	1 cut(s)	397
BmsI	GCATC	5 cut(s)	363, 853, 913, 1025, 1163
BmuI	ACTGGG	1 cut(s)	397
BplI	GAGNNNNNCTC	2 cut(s)	521, 553
BpmI	CTGGAG	2 cut(s)	78, 350
Bpu10I	CCTNAGC	1 cut(s)	1110
BpuEI	CTTGAG	1 cut(s)	1304
BpuMI	CCSGG	1 cut(s)	1573
Bsa29I	ATCGAT	1 cut(s)	861
BsaAI	YACGTR	3 cut(s)	401, 487, 1371
BsaHI	GRCGYC	1 cut(s)	339
BsaJI	CCNNGG	1 cut(s)	349
BsaWI	WCCGGW	2 cut(s)	421, 625
Bsc4I	CCNNNNNNNGG	2 cut(s)	607, 1579
Bse118I	RCCGGY	1 cut(s)	290
Bse1I	ACTGG	3 cut(s)	392, 576, 1415
Bse3DI	GCAATG	3 cut(s)	1045, 1182, 1407
BseAI	TCCGGA	2 cut(s)	421, 625
BseBI	CCWGG	1 cut(s)	368
BseCI	ATCGAT	1 cut(s)	861
BseDI	CCNNGG	1 cut(s)	349
BseGI	GGATG	8 cut(s)	249, 354, 1040, 1051, 1093, 1204, 1224, 1345
BseLI	CCNNNNNNNGG	2 cut(s)	607, 1579
BseMI	GCAATG	3 cut(s)	1045, 1182, 1407
BseNI	ACTGG	3 cut(s)	392, 576, 1415
BseRI	GAGGAG	5 cut(s)	39, 219, 253, 623, 1463
BseSI	GKGCMC	2 cut(s)	591, 1410
BseX3I	CGGCCG	1 cut(s)	306
BseXI	GCAGC	5 cut(s)	562, 805, 1093, 1127, 1155
BseYI	CCCAGC	3 cut(s)	276, 773, 1030
Bsh1236I	CGCG	4 cut(s)	321, 377, 593, 894
Bsh1285I	CGRYCG	1 cut(s)	309
BshFI	GGCC	6 cut(s)	5, 308, 371, 392, 566, 1576
BshNI	GGYRCC	1 cut(s)	338
BshVI	ATCGAT	1 cut(s)	861
BsiEI	CGRYCG	1 cut(s)	309
BsiHKAI	GWGCWC	4 cut(s)	417, 591, 1213, 1320
BsiHKCI	CYCGRG	1 cut(s)	326
BsiSI	CCGG	7 cut(s)	291, 305, 422, 453, 567, 626, 1573
BslI	CCNNNNNNNGG	2 cut(s)	607, 1579
BsmAI	GTCTC	1 cut(s)	524
BsmI	GAATGC	2 cut(s)	638, 1513
BsnI	GGCC	6 cut(s)	5, 308, 371, 392, 566, 1576
BsoBI	CYCGRG	1 cut(s)	326
Bsp1286I	GDGCHC	5 cut(s)	417, 591, 1213, 1320, 1410
Bsp13I	TCCGGA	2 cut(s)	421, 625
Bsp1407I	TGTACA	1 cut(s)	741
Bsp143I	GATC	3 cut(s)	489, 858, 1383
BspANI	GGCC	6 cut(s)	5, 308, 371, 392, 566, 1576
BspDI	ATCGAT	1 cut(s)	861
BspEI	TCCGGA	2 cut(s)	421, 625
BspFNI	CGCG	4 cut(s)	321, 377, 593, 894
BspHI	TCATGA	1 cut(s)	898
BspLI	GGNNCC	4 cut(s)	295, 340, 426, 1356
BspMAI	CTGCAG	1 cut(s)	1145
BspMI	ACCTGC	1 cut(s)	997
BspT107I	GGYRCC	1 cut(s)	338
BsrBI	CCGCTC	1 cut(s)	227
BsrDI	GCAATG	3 cut(s)	1045, 1182, 1407
BsrFI	RCCGGY	1 cut(s)	290
BsrGI	TGTACA	1 cut(s)	741
BsrI	ACTGG	3 cut(s)	392, 576, 1415
BssAI	RCCGGY	1 cut(s)	290
BssECI	CCNNGG	1 cut(s)	349
BssMI	GATC	3 cut(s)	489, 858, 1383
BssNAI	GTATAC	1 cut(s)	1224
BssNI	GRCGYC	1 cut(s)	339
Bst1107I	GTATAC	1 cut(s)	1224
Bst2UI	CCWGG	1 cut(s)	368
Bst4CI	ACNGT	4 cut(s)	526, 602, 1261, 1518
Bst6I	CTCTTC	5 cut(s)	82, 91, 665, 1019, 1095
BstACI	GRCGYC	1 cut(s)	339
BstAUI	TGTACA	1 cut(s)	741
BstBAI	YACGTR	3 cut(s)	401, 487, 1371
BstC8I	GCNNGC	3 cut(s)	292, 591, 693
BstDEI	CTNAG	1 cut(s)	1110
BstDSI	CCRYGG	1 cut(s)	349
BstF5I	GGATG	8 cut(s)	249, 354, 1040, 1051, 1093, 1204, 1224, 1345
BstFNI	CGCG	4 cut(s)	321, 377, 593, 894
BstH2I	RGCGCY	1 cut(s)	342
BstHHI	GCGC	3 cut(s)	341, 691, 896
BstKTI	GATC	3 cut(s)	492, 861, 1386
BstMAI	GTCTC	1 cut(s)	524
BstMBI	GATC	3 cut(s)	489, 858, 1383
BstMCI	CGRYCG	1 cut(s)	309
BstMWI	GCNNNNNNNGC	5 cut(s)	345, 572, 581, 590, 686
BstNI	CCWGG	1 cut(s)	368
BstSCI	CCNGG	2 cut(s)	366, 1571
BstSFI	CTRYAG	1 cut(s)	1141
BstSLI	GKGCMC	2 cut(s)	591, 1410
BstUI	CGCG	4 cut(s)	321, 377, 593, 894
BstV1I	GCAGC	5 cut(s)	562, 805, 1093, 1127, 1155
BstZ17I	GTATAC	1 cut(s)	1224
BstZI	CGGCCG	1 cut(s)	306
Bsu15I	ATCGAT	1 cut(s)	861
BsuRI	GGCC	6 cut(s)	5, 308, 371, 392, 566, 1576
BsuTUI	ATCGAT	1 cut(s)	861
BtgI	CCRYGG	1 cut(s)	349
BtrI	CACGTC	1 cut(s)	396
BtsCI	GGATG	8 cut(s)	249, 354, 1040, 1051, 1093, 1204, 1224, 1345
BtsI	GCAGTG	1 cut(s)	591
BtsIMutI	CAGTG	3 cut(s)	591, 1266, 1408
BveI	ACCTGC	1 cut(s)	997
Cac8I	GCNNGC	3 cut(s)	292, 591, 693
CciI	TCATGA	1 cut(s)	898
CfoI	GCGC	3 cut(s)	341, 691, 896
Cfr10I	RCCGGY	1 cut(s)	290
Cfr13I	GGNCC	2 cut(s)	390, 564
ClaI	ATCGAT	1 cut(s)	861
CseI	GACGC	1 cut(s)	310
Csp6I	GTAC	1 cut(s)	742
CviAII	CATG	4 cut(s)	899, 974, 1312, 1529
CviQI	GTAC	1 cut(s)	742
DdeI	CTNAG	1 cut(s)	1110
DinI	GGCGCC	1 cut(s)	340
DpnI	GATC	3 cut(s)	491, 860, 1385
DpnII	GATC	3 cut(s)	489, 858, 1383
EaeI	YGGCCR	3 cut(s)	3, 306, 1574
EagI	CGGCCG	1 cut(s)	306
Eam1104I	CTCTTC	5 cut(s)	82, 91, 665, 1019, 1095
EarI	CTCTTC	5 cut(s)	82, 91, 665, 1019, 1095
EciI	GGCGGA	4 cut(s)	23, 274, 305, 335
EclXI	CGGCCG	1 cut(s)	306
Eco52I	CGGCCG	1 cut(s)	306
Eco57I	CTGAAG	4 cut(s)	72, 1214, 1346, 1514
Eco72I	CACGTG	2 cut(s)	401, 487
Eco88I	CYCGRG	1 cut(s)	326
EcoRI	GAATTC	1 cut(s)	940
EcoRII	CCWGG	1 cut(s)	366
EcoT22I	ATGCAT	2 cut(s)	868, 1156
EgeI	GGCGCC	1 cut(s)	340
EheI	GGCGCC	1 cut(s)	340
FaeI	CATG	4 cut(s)	902, 977, 1315, 1532
FatI	CATG	4 cut(s)	898, 973, 1311, 1528
FauI	CCCGC	3 cut(s)	232, 814, 919
FblI	GTMKAC	3 cut(s)	444, 1223, 1304
FokI	GGATG	8 cut(s)	236, 341, 1047, 1058, 1100, 1211, 1231, 1352
FspBI	CTAG	2 cut(s)	747, 1588
GlaI	GCGC	3 cut(s)	340, 690, 895
GsaI	CCCAGC	3 cut(s)	280, 777, 1034
GsuI	CTGGAG	2 cut(s)	78, 350
HaeII	RGCGCY	1 cut(s)	342
HaeIII	GGCC	6 cut(s)	5, 308, 371, 392, 566, 1576
HapII	CCGG	7 cut(s)	291, 305, 422, 453, 567, 626, 1573
HgaI	GACGC	1 cut(s)	310
HhaI	GCGC	3 cut(s)	341, 691, 896
Hin1I	GRCGYC	1 cut(s)	339
Hin1II	CATG	4 cut(s)	902, 977, 1315, 1532
Hin6I	GCGC	3 cut(s)	339, 689, 894
HinP1I	GCGC	3 cut(s)	339, 689, 894
HincII	GTYRAC	2 cut(s)	445, 1555
HindII	GTYRAC	2 cut(s)	445, 1555
HinfI	GANTC	4 cut(s)	541, 658, 736, 1295
HpaII	CCGG	7 cut(s)	291, 305, 422, 453, 567, 626, 1573
HphI	GGTGA	2 cut(s)	472, 1141
Hpy166II	GTNNAC	7 cut(s)	445, 589, 744, 1224, 1305, 1366, 1555
Hpy188I	TCNGA	5 cut(s)	268, 510, 939, 1020, 1494
Hpy188III	TCNNGA	7 cut(s)	95, 328, 422, 538, 626, 899, 1381
Hpy8I	GTNNAC	7 cut(s)	445, 589, 744, 1224, 1305, 1366, 1555
Hpy99I	CGWCG	2 cut(s)	314, 377
HpyAV	CCTTC	6 cut(s)	264, 669, 808, 973, 1189, 1324
HpyCH4III	ACNGT	4 cut(s)	526, 602, 1261, 1518
HpyCH4IV	ACGT	5 cut(s)	395, 400, 486, 1362, 1370
HpyF10VI	GCNNNNNNNGC	5 cut(s)	345, 572, 581, 590, 686
HpyF3I	CTNAG	1 cut(s)	1110
HpySE526I	ACGT	5 cut(s)	395, 400, 486, 1362, 1370
Hsp92I	GRCGYC	1 cut(s)	339
Hsp92II	CATG	4 cut(s)	902, 977, 1315, 1532
HspAI	GCGC	3 cut(s)	339, 689, 894
KasI	GGCGCC	1 cut(s)	338
Kpn2I	TCCGGA	2 cut(s)	421, 625
KroI	GCCGGC	1 cut(s)	290
KroNI	GCCGGC	1 cut(s)	292
Kzo9I	GATC	3 cut(s)	489, 858, 1383
LmnI	GCTCC	5 cut(s)	97, 232, 299, 424, 1354
Lsp1109I	GCAGC	5 cut(s)	562, 805, 1093, 1127, 1155
LweI	GCATC	5 cut(s)	363, 853, 913, 1025, 1163
MaeI	CTAG	2 cut(s)	747, 1588
MaeII	ACGT	5 cut(s)	395, 400, 486, 1362, 1370
MaeIII	GTNAC	4 cut(s)	396, 845, 1261, 1567
MalI	GATC	3 cut(s)	491, 860, 1385
MbiI	CCGCTC	1 cut(s)	227
MboI	GATC	3 cut(s)	489, 858, 1383
MhlI	GDGCHC	5 cut(s)	417, 591, 1213, 1320, 1410
MluCI	AATT	5 cut(s)	467, 940, 1060, 1120, 1535
MluI	ACGCGT	1 cut(s)	591
Mly113I	GGCGCC	1 cut(s)	339
MlyI	GAGTC	1 cut(s)	1304
MmeI	TCCRAC	1 cut(s)	291
Mph1103I	ATGCAT	2 cut(s)	868, 1156
MroI	TCCGGA	2 cut(s)	421, 625
MroNI	GCCGGC	1 cut(s)	290
MseI	TTAA	7 cut(s)	11, 597, 756, 804, 954, 1277, 1460
MspI	CCGG	7 cut(s)	291, 305, 422, 453, 567, 626, 1573
MspR9I	CCNGG	2 cut(s)	368, 1573
Mva1269I	GAATGC	2 cut(s)	638, 1513
MvaI	CCWGG	1 cut(s)	368
MvnI	CGCG	4 cut(s)	321, 377, 593, 894
MwoI	GCNNNNNNNGC	5 cut(s)	345, 572, 581, 590, 686
NaeI	GCCGGC	1 cut(s)	292
NarI	GGCGCC	1 cut(s)	339
NciI	CCSGG	1 cut(s)	1573
NdeII	GATC	3 cut(s)	489, 858, 1383
NgoMIV	GCCGGC	1 cut(s)	290
NlaIII	CATG	4 cut(s)	902, 977, 1315, 1532
NlaIV	GGNNCC	4 cut(s)	295, 340, 426, 1356
NmeAIII	GCCGAG	1 cut(s)	1318
NmuCI	GTSAC	2 cut(s)	396, 1261
NsiI	ATGCAT	2 cut(s)	868, 1156
PaeR7I	CTCGAG	1 cut(s)	326
PagI	TCATGA	1 cut(s)	898
PcsI	WCGNNNNNNNCGW	3 cut(s)	318, 357, 441
PctI	GAATGC	2 cut(s)	638, 1513
PdiI	GCCGGC	1 cut(s)	292
PfeI	GAWTC	3 cut(s)	541, 658, 736
PleI	GAGTC	1 cut(s)	1303
PluTI	GGCGCC	1 cut(s)	342
PmaCI	CACGTG	2 cut(s)	401, 487
PmlI	CACGTG	2 cut(s)	401, 487
PpsI	GAGTC	1 cut(s)	1303
Ppu21I	YACGTR	3 cut(s)	401, 487, 1371
PsiI	TTATAA	2 cut(s)	1014, 1059
Psp6I	CCWGG	1 cut(s)	366
PspCI	CACGTG	2 cut(s)	401, 487
PspFI	CCCAGC	3 cut(s)	276, 773, 1030
PspGI	CCWGG	1 cut(s)	366
PspN4I	GGNNCC	4 cut(s)	295, 340, 426, 1356
PspPI	GGNCC	2 cut(s)	390, 564
PsrI	GAACNNNNNNTAC	2 cut(s)	1406, 1438
PstI	CTGCAG	1 cut(s)	1145
RsaI	GTAC	1 cut(s)	743
RsaNI	GTAC	1 cut(s)	742
SalI	GTCGAC	1 cut(s)	443
SaqAI	TTAA	7 cut(s)	11, 597, 756, 804, 954, 1277, 1460
Sau3AI	GATC	3 cut(s)	489, 858, 1383
Sau96I	GGNCC	2 cut(s)	390, 564
SchI	GAGTC	1 cut(s)	1304
ScrFI	CCNGG	2 cut(s)	368, 1573
SduI	GDGCHC	5 cut(s)	417, 591, 1213, 1320, 1410
SfaNI	GCATC	5 cut(s)	363, 853, 913, 1025, 1163
SfcI	CTRYAG	1 cut(s)	1141
SfoI	GGCGCC	1 cut(s)	340
Sfr274I	CTCGAG	1 cut(s)	326
SlaI	CTCGAG	1 cut(s)	326
SmlI	CTYRAG	2 cut(s)	326, 1319
SmoI	CTYRAG	2 cut(s)	326, 1319
Sse9I	AATT	5 cut(s)	467, 940, 1060, 1120, 1535
SspDI	GGCGCC	1 cut(s)	338
SspI	AATATT	1 cut(s)	781
SspMI	CTAG	2 cut(s)	747, 1588
StyD4I	CCNGG	2 cut(s)	366, 1571
TaaI	ACNGT	4 cut(s)	526, 602, 1261, 1518
TaiI	ACGT	5 cut(s)	398, 403, 489, 1365, 1373
TaqI	TCGA	9 cut(s)	327, 411, 444, 471, 492, 539, 702, 861, 1157
TasI	AATT	5 cut(s)	467, 940, 1060, 1120, 1535
TatI	WGTACW	1 cut(s)	741
TauI	GCSGC	6 cut(s)	8, 39, 290, 321, 339, 553
TfiI	GAWTC	3 cut(s)	541, 658, 736
Tru1I	TTAA	7 cut(s)	11, 597, 756, 804, 954, 1277, 1460
Tru9I	TTAA	7 cut(s)	11, 597, 756, 804, 954, 1277, 1460
TscAI	CASTG	3 cut(s)	591, 1266, 1415
TseFI	GTSAC	2 cut(s)	396, 1261
TseI	GCWGC	5 cut(s)	575, 818, 1106, 1140, 1143
Tsp45I	GTSAC	2 cut(s)	396, 1261
TspDTI	ATGAA	6 cut(s)	515, 827, 962, 1037, 1247, 1362
TspGWI	ACGGA	1 cut(s)	286
TspRI	CASTG	3 cut(s)	591, 1266, 1415
VneI	GTGCAC	1 cut(s)	587
XapI	RAATTY	2 cut(s)	940, 1120
XhoI	CTCGAG	1 cut(s)	326
XmiI	GTMKAC	3 cut(s)	444, 1223, 1304
XspI	CTAG	2 cut(s)	747, 1588
Zsp2I	ATGCAT	2 cut(s)	868, 1156

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.