Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0014352

Physical Location & Seq

Genomic Coordinates Forward (+)

61438450 .. 61440493

Gene Structure 2044 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG436600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1596 bp

ATGGCCGCCTTAACCAAATCAAACCTCCCTCTCCGCCGCTTTCTCTCTCCTCTCTCTCAACGAATTCTCAATCCCTCTTCTCTCTCTTCAGCTCAGCCTCATCTCCAAGACGACGACGACACTTCCCAAACTGCCCCCAACTTAGCCACCGACGAAACCCTAATCGCCGACACATTCCACTCCCTAATCAAAGACCACCACCGCAACAACCCCAACCCTGACCCCAACCCTACTCCTCCAAACCCTACCTACACAATCCCTTGTCTCTCCTCCGACTTCTCCCAACTCTCCGCCGCCGCCTCCATTTCTCCGGCCGTCGTCCGCCGCGTCATCGAGAAATGCGGCGGCGTCCGCCACGGCATCCCCGTCCTCCAGGCCCTCGCCTTCTTCAACTGGGCCACGTCACGTGACGGCTTCGAGCACAGTCCGGGGCCGTACAACGAGATGGTCGACCTCGCCGGAAAGGTGAGGCAGTTCGATTTGGCTTGGCACGTGATCGACTTGATGAAAGCTCGGAATGTTGAAATTACGGTGGAGACATTCTCGATTCTTGTGCGCCGGTACGTGAGGGCCGGATTGGCTGCGGAGGCGGTGCACGCGTTTAACCGTATGGAGGAGTATGGCGTCAATCCTGATAGGATTGCTTTCTCGGTTGTGATTGGGATTCTCTGTAAGAAGAGAAGGGCAAGTGAAGCGCAGGCGTTTTTCGATAGCTTGAAGCATAAATTCGAGGCTGATGTGATTCTGTACACTAGCTTGGTTAATGGATGGTGTAGAGCTGGGAATATATCAGAGGCAGAGAGGGTGTTTAGGGAGATGAAGGCGGCAGGGATTGAGCCGAATGTATATACTTACAGCATTGTGATAGATGCATTGTGTAGGTGTGGACAGATTACTCGCGCTCATGATGTTTTCGCGGAGATGATTGATGCAGGTTGCAATCCCAACTCGATCACTTTTAACAATCTAATGAGAGTTCATGTGAAGGCTGGACGAACCGAAAAGGTGTTGCAGGTTTATAATCAGATGAAGAGGTTGGGATGCAATGCAGATTTGATTACTTACAATTTTCTTATAGAGTGTCATTGTAAGGATGAGAATGTTGAAGAGGCTGTTAAGGTGCTGAATTTGATGGTGAAGAAAGGCTGCAGCCCTAATGCATCGACTTTCAATCCCATATTTCGGTGCATTGCGAAGCTGAAGGATGTGAATGGTGCTCACAGGATGTACACTAAGATGAAGGATTTGGATTGCAAGGCGAACACAGTGACCTACAATGTGTTAATGCAGATGTTTGCGGAGTCAAAGTCGACTGATATGGTGCTCAAGCTGAAGAAGGAGATGGATGAGAATGAAGTGGAGCCTAATGTGAATACATATAAGGTCTTAATCTCTATGTATTGTGCAATGGGGCATTGGAACAACGCTTACAGGTTCTGTAGGGAGATGATTGAGGAGAAATGCTTAAAACCAAGTATGCCGGTTTATGAGATGGTTCTGAAGCAGTTGAGGAATGCAGGACAGTTGAAGAAGCATGAGGAATTGGTGGAAAAAATGGTTGACAGGGGCTTCGTTACTCGCCCATTAGCAGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

531

Amino Acids

59.92

Weight (kDa)

8.37

Isoelectric Point (pI)

36.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	146 - 188	9.6e-06	PPR repeat family
TPR_24	PF23276	150 - 240	3e-07	Fungal tetratrico peptide repeats
PPR_3	PF13812	165 - 223	5.7e-06	Pentatricopeptide repeat domain
PPR_long	PF17177	234 - 338	3.5e-10	Pentacotripeptide-repeat region of PRORP
TPR_24	PF23276	238 - 343	5.4e-07	Fungal tetratrico peptide repeats
PPR_3	PF13812	242 - 291	2e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	244 - 274	9.2e-11	PPR repeat
PPR_2	PF13041	246 - 294	5.7e-18	PPR repeat family
PPR	PF01535	249 - 278	1.5e-07	PPR repeat
PPR_1	PF12854	277 - 308	2.2e-10	PPR repeat
PPR_3	PF13812	277 - 328	2.5e-09	Pentatricopeptide repeat domain
PPR	PF01535	283 - 313	1.3e-06	PPR repeat
PPR_2	PF13041	287 - 325	2.5e-09	PPR repeat family
PPR_2	PF13041	315 - 360	1.7e-12	PPR repeat family
PPR	PF01535	318 - 348	2.2e-06	PPR repeat
TPR_24	PF23276	332 - 444	1.6e-12	Fungal tetratrico peptide repeats
PPR_long	PF17177	335 - 413	5.9e-06	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	339 - 397	1.4e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	347 - 379	1.4e-09	PPR repeat
PPR_2	PF13041	351 - 399	6.3e-14	PPR repeat family
PPR	PF01535	353 - 383	2.4e-07	PPR repeat
PPR_2	PF13041	385 - 433	2.8e-09	PPR repeat family
PPR_long	PF17177	398 - 522	6.9e-09	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	411 - 467	3.8e-09	Pentatricopeptide repeat domain
PPR_2	PF13041	421 - 468	1.2e-11	PPR repeat family
PPR_3	PF13812	443 - 501	7.2e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	452 - 483	3.3e-07	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0014352)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20300
fragaria_vesca	FvH4_2g37970
prunus_persica	Prupe.1G359600_v2.0.a1
pyrus_communis	pycom08g00640 pycom15g00550
rosa_chinensis	RchiOBHm_Chr6g0303651
rosa_laevigata	RLG00000011063
rosa_multiflora	Rmu_co8419065.1_g000001 Rmu_sc0013443.1_g000006 Rmu_ssc0000114.1_g000016
rosa_roxburghii	Rroxscaffold_7G00164520
rosa_rugosa	Rorug06G0323400
rosa_samantha	Rh6AG437700 Rh6BG465400 Rh6CG449800 Rh6DG436600
rosa_wichuraiana	Rw6G037890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1020
Acc36I	ACCTGC	2 cut(s)	923, 1003
AccI	GTMKAC	2 cut(s)	450, 1310
AccII	CGCG	4 cut(s)	327, 599, 900, 917
AcoI	YGGCCR	2 cut(s)	3, 312
AcsI	RAATTY	3 cut(s)	63, 725, 1126
AcuI	CTGAAG	4 cut(s)	72, 1220, 1352, 1520
AcvI	CACGTG	2 cut(s)	407, 493
AcyI	GRCGYC	2 cut(s)	348, 624
AfaI	GTAC	4 cut(s)	437, 563, 749, 1229
AfiI	CCNNNNNNNGG	2 cut(s)	613, 1182
AflIII	ACRYGT	1 cut(s)	597
AgsI	TTSAA	6 cut(s)	391, 524, 718, 1106, 1171, 1528
AjiI	CACGTC	1 cut(s)	402
AjnI	CCWGG	1 cut(s)	372
AluBI	AGCT	7 cut(s)	92, 512, 714, 756, 779, 1198, 1330
AluI	AGCT	7 cut(s)	92, 512, 714, 756, 779, 1198, 1330
Alw21I	GWGCWC	4 cut(s)	423, 597, 1219, 1326
Alw26I	GTCTC	2 cut(s)	269, 530
Alw44I	GTGCAC	1 cut(s)	593
AlwNI	CAGNNNCTG	1 cut(s)	1437
AoxI	GGCC	6 cut(s)	3, 312, 375, 396, 431, 570
ApaLI	GTGCAC	1 cut(s)	593
ApeKI	GCWGC	3 cut(s)	581, 1146, 1149
ApoI	RAATTY	3 cut(s)	63, 725, 1126
ArsI	GACNNNNNNTTYG	2 cut(s)	1553, 1585
AspLEI	GCGC	3 cut(s)	558, 697, 902
AspS9I	GGNCC	4 cut(s)	376, 396, 431, 570
AsuC2I	CCSGG	1 cut(s)	429
AsuHPI	GGTGA	2 cut(s)	478, 1147
BaeGI	GKGCMC	1 cut(s)	597
BbrPI	CACGTG	2 cut(s)	407, 493
Bbv12I	GWGCWC	4 cut(s)	423, 597, 1219, 1326
BbvI	GCAGC	3 cut(s)	568, 1133, 1161
BccI	CCATC	5 cut(s)	439, 762, 1126, 1336, 1486
BceAI	ACGGC	4 cut(s)	299, 373, 418, 427
BcgI	CGANNNNNNTGC	2 cut(s)	535, 569
BciT130I	CCWGG	1 cut(s)	374
BcnI	CCSGG	1 cut(s)	429
BcoDI	GTCTC	2 cut(s)	269, 530
BfaI	CTAG	1 cut(s)	753
BfmI	CTRYAG	2 cut(s)	1147, 1438
BfuAI	ACCTGC	2 cut(s)	923, 1003
BglI	GCCNNNNNGGC	1 cut(s)	578
BlpI	GCTNAGC	1 cut(s)	93
Bme1390I	CCNGG	2 cut(s)	374, 429
BmgBI	CACGTC	1 cut(s)	402
BmgT120I	GGNCC	4 cut(s)	376, 396, 431, 570
BmiI	GGNNCC	2 cut(s)	432, 1362
BmrFI	CCNGG	2 cut(s)	374, 429
BmrI	ACTGGG	1 cut(s)	403
BmsI	GCATC	5 cut(s)	369, 859, 919, 1031, 1169
BmuI	ACTGGG	1 cut(s)	403
BplI	GAGNNNNNCTC	2 cut(s)	527, 559
BpmI	CTGGAG	1 cut(s)	356
Bpu1102I	GCTNAGC	1 cut(s)	93
BpuEI	CTTGAG	1 cut(s)	1310
BpuMI	CCSGG	1 cut(s)	429
BsaAI	YACGTR	3 cut(s)	407, 493, 565
BsaHI	GRCGYC	2 cut(s)	348, 624
BsaJI	CCNNGG	2 cut(s)	355, 428
BsaXI	ACNNNNNCTCC	2 cut(s)	1292, 1322
Bsc4I	CCNNNNNNNGG	2 cut(s)	613, 1182
Bse118I	RCCGGY	2 cut(s)	558, 1480
Bse1I	ACTGG	1 cut(s)	398
Bse3DI	GCAATG	3 cut(s)	1051, 1188, 1413
BseBI	CCWGG	1 cut(s)	374
BseDI	CCNNGG	2 cut(s)	355, 428
BseGI	GGATG	7 cut(s)	360, 773, 1046, 1099, 1210, 1230, 1351
BseLI	CCNNNNNNNGG	2 cut(s)	613, 1182
BseMI	GCAATG	3 cut(s)	1051, 1188, 1413
BseMII	CTCAG	1 cut(s)	107
BseNI	ACTGG	1 cut(s)	398
BseRI	GAGGAG	5 cut(s)	39, 225, 259, 629, 1469
BseSI	GKGCMC	1 cut(s)	597
BseX3I	CGGCCG	1 cut(s)	312
BseXI	GCAGC	3 cut(s)	568, 1133, 1161
BseYI	CCCAGC	1 cut(s)	779
Bsh1236I	CGCG	4 cut(s)	327, 599, 900, 917
Bsh1285I	CGRYCG	1 cut(s)	315
BshFI	GGCC	6 cut(s)	5, 314, 377, 398, 433, 572
BsiEI	CGRYCG	1 cut(s)	315
BsiHKAI	GWGCWC	4 cut(s)	423, 597, 1219, 1326
BsiSI	CCGG	6 cut(s)	311, 428, 459, 559, 573, 1481
BslI	CCNNNNNNNGG	2 cut(s)	613, 1182
BsmAI	GTCTC	2 cut(s)	269, 530
BsmI	GAATGC	1 cut(s)	1519
BsnI	GGCC	6 cut(s)	5, 314, 377, 398, 433, 572
Bsp1286I	GDGCHC	4 cut(s)	423, 597, 1219, 1326
Bsp1407I	TGTACA	2 cut(s)	747, 1227
Bsp143I	GATC	2 cut(s)	495, 951
Bsp1720I	GCTNAGC	1 cut(s)	93
BspANI	GGCC	6 cut(s)	5, 314, 377, 398, 433, 572
BspCNI	CTCAG	1 cut(s)	106
BspFNI	CGCG	4 cut(s)	327, 599, 900, 917
BspHI	TCATGA	1 cut(s)	904
BspLI	GGNNCC	2 cut(s)	432, 1362
BspMAI	CTGCAG	1 cut(s)	1151
BspMI	ACCTGC	2 cut(s)	923, 1003
BsrDI	GCAATG	3 cut(s)	1051, 1188, 1413
BsrFI	RCCGGY	2 cut(s)	558, 1480
BsrGI	TGTACA	2 cut(s)	747, 1227
BsrI	ACTGG	1 cut(s)	398
BssAI	RCCGGY	2 cut(s)	558, 1480
BssECI	CCNNGG	2 cut(s)	355, 428
BssMI	GATC	2 cut(s)	495, 951
BssNI	GRCGYC	2 cut(s)	348, 624
Bst2UI	CCWGG	1 cut(s)	374
Bst4CI	ACNGT	5 cut(s)	425, 532, 608, 1267, 1524
Bst6I	CTCTTC	5 cut(s)	82, 91, 671, 1025, 1101
BstACI	GRCGYC	2 cut(s)	348, 624
BstAUI	TGTACA	2 cut(s)	747, 1227
BstBAI	YACGTR	3 cut(s)	407, 493, 565
BstC8I	GCNNGC	2 cut(s)	597, 699
BstDEI	CTNAG	3 cut(s)	93, 142, 1233
BstDSI	CCRYGG	1 cut(s)	355
BstF5I	GGATG	7 cut(s)	360, 773, 1046, 1099, 1210, 1230, 1351
BstFNI	CGCG	4 cut(s)	327, 599, 900, 917
BstHHI	GCGC	3 cut(s)	558, 697, 902
BstKTI	GATC	2 cut(s)	498, 954
BstMAI	GTCTC	2 cut(s)	269, 530
BstMBI	GATC	2 cut(s)	495, 951
BstMCI	CGRYCG	1 cut(s)	315
BstMWI	GCNNNNNNNGC	5 cut(s)	351, 578, 587, 596, 692
BstNI	CCWGG	1 cut(s)	374
BstSCI	CCNGG	2 cut(s)	372, 427
BstSFI	CTRYAG	2 cut(s)	1147, 1438
BstSLI	GKGCMC	1 cut(s)	597
BstUI	CGCG	4 cut(s)	327, 599, 900, 917
BstV1I	GCAGC	3 cut(s)	568, 1133, 1161
BstZI	CGGCCG	1 cut(s)	312
BsuRI	GGCC	6 cut(s)	5, 314, 377, 398, 433, 572
BtgI	CCRYGG	1 cut(s)	355
BtrI	CACGTC	1 cut(s)	402
BtsCI	GGATG	7 cut(s)	360, 773, 1046, 1099, 1210, 1230, 1351
BtsIMutI	CAGTG	1 cut(s)	1272
BveI	ACCTGC	2 cut(s)	923, 1003
Cac8I	GCNNGC	2 cut(s)	597, 699
CaiI	CAGNNNCTG	1 cut(s)	1437
CciI	TCATGA	1 cut(s)	904
CfoI	GCGC	3 cut(s)	558, 697, 902
Cfr10I	RCCGGY	2 cut(s)	558, 1480
Cfr13I	GGNCC	4 cut(s)	376, 396, 431, 570
CseI	GACGC	3 cut(s)	316, 337, 613
Csp6I	GTAC	4 cut(s)	436, 562, 748, 1228
CviAII	CATG	3 cut(s)	905, 980, 1535
CviQI	GTAC	4 cut(s)	436, 562, 748, 1228
DdeI	CTNAG	3 cut(s)	93, 142, 1233
DpnI	GATC	2 cut(s)	497, 953
DpnII	GATC	2 cut(s)	495, 951
EaeI	YGGCCR	2 cut(s)	3, 312
EagI	CGGCCG	1 cut(s)	312
Eam1104I	CTCTTC	5 cut(s)	82, 91, 671, 1025, 1101
EarI	CTCTTC	5 cut(s)	82, 91, 671, 1025, 1101
EciI	GGCGGA	4 cut(s)	23, 280, 311, 341
EclXI	CGGCCG	1 cut(s)	312
Eco52I	CGGCCG	1 cut(s)	312
Eco57I	CTGAAG	4 cut(s)	72, 1220, 1352, 1520
Eco72I	CACGTG	2 cut(s)	407, 493
EcoO109I	RGGNCCY	1 cut(s)	376
EcoRI	GAATTC	1 cut(s)	63
EcoRII	CCWGG	1 cut(s)	372
EcoT22I	ATGCAT	2 cut(s)	874, 1162
FaeI	CATG	3 cut(s)	908, 983, 1538
FatI	CATG	3 cut(s)	904, 979, 1534
FblI	GTMKAC	2 cut(s)	450, 1310
FokI	GGATG	7 cut(s)	347, 780, 1053, 1106, 1217, 1237, 1358
FspBI	CTAG	1 cut(s)	753
GlaI	GCGC	3 cut(s)	557, 696, 901
GsaI	CCCAGC	1 cut(s)	783
GsuI	CTGGAG	1 cut(s)	356
HaeIII	GGCC	6 cut(s)	5, 314, 377, 398, 433, 572
HapII	CCGG	6 cut(s)	311, 428, 459, 559, 573, 1481
HgaI	GACGC	3 cut(s)	316, 337, 613
HhaI	GCGC	3 cut(s)	558, 697, 902
Hin1I	GRCGYC	2 cut(s)	348, 624
Hin1II	CATG	3 cut(s)	908, 983, 1538
Hin6I	GCGC	3 cut(s)	556, 695, 900
HinP1I	GCGC	3 cut(s)	556, 695, 900
HincII	GTYRAC	3 cut(s)	451, 1311, 1561
HindII	GTYRAC	3 cut(s)	451, 1311, 1561
HinfI	GANTC	4 cut(s)	547, 664, 742, 1301
HpaII	CCGG	6 cut(s)	311, 428, 459, 559, 573, 1481
HphI	GGTGA	2 cut(s)	478, 1147
Hpy166II	GTNNAC	7 cut(s)	451, 595, 750, 887, 1230, 1311, 1561
Hpy188I	TCNGA	5 cut(s)	274, 516, 793, 1026, 1500
Hpy188III	TCNNGA	4 cut(s)	334, 544, 632, 905
Hpy8I	GTNNAC	7 cut(s)	451, 595, 750, 887, 1230, 1311, 1561
Hpy99I	CGWCG	4 cut(s)	116, 119, 155, 320
HpyAV	CCTTC	7 cut(s)	394, 675, 814, 979, 1195, 1234, 1330
HpyCH4III	ACNGT	5 cut(s)	425, 532, 608, 1267, 1524
HpyCH4IV	ACGT	4 cut(s)	401, 406, 492, 564
HpyF10VI	GCNNNNNNNGC	5 cut(s)	351, 578, 587, 596, 692
HpyF3I	CTNAG	3 cut(s)	93, 142, 1233
HpySE526I	ACGT	4 cut(s)	401, 406, 492, 564
Hsp92I	GRCGYC	2 cut(s)	348, 624
Hsp92II	CATG	3 cut(s)	908, 983, 1538
HspAI	GCGC	3 cut(s)	556, 695, 900
Kzo9I	GATC	2 cut(s)	495, 951
LmnI	GCTCC	1 cut(s)	1360
Lsp1109I	GCAGC	3 cut(s)	568, 1133, 1161
LweI	GCATC	5 cut(s)	369, 859, 919, 1031, 1169
MaeI	CTAG	1 cut(s)	753
MaeII	ACGT	4 cut(s)	401, 406, 492, 564
MaeIII	GTNAC	4 cut(s)	402, 407, 1267, 1573
MalI	GATC	2 cut(s)	497, 953
MboI	GATC	2 cut(s)	495, 951
MboII	GAAGA	9 cut(s)	69, 78, 379, 688, 1042, 1118, 1150, 1345, 1540
MhlI	GDGCHC	4 cut(s)	423, 597, 1219, 1326
MluCI	AATT	6 cut(s)	63, 525, 725, 1066, 1126, 1541
MluI	ACGCGT	1 cut(s)	597
MlyI	GAGTC	1 cut(s)	1310
MmeI	TCCRAC	1 cut(s)	297
Mph1103I	ATGCAT	2 cut(s)	874, 1162
MseI	TTAA	8 cut(s)	11, 603, 762, 960, 1116, 1283, 1388, 1466
MslI	CAYNNNNRTG	1 cut(s)	1235
MspI	CCGG	6 cut(s)	311, 428, 459, 559, 573, 1481
MspR9I	CCNGG	2 cut(s)	374, 429
Mva1269I	GAATGC	1 cut(s)	1519
MvaI	CCWGG	1 cut(s)	374
MvnI	CGCG	4 cut(s)	327, 599, 900, 917
MwoI	GCNNNNNNNGC	5 cut(s)	351, 578, 587, 596, 692
NciI	CCSGG	1 cut(s)	429
NdeII	GATC	2 cut(s)	495, 951
NlaIII	CATG	3 cut(s)	908, 983, 1538
NlaIV	GGNNCC	2 cut(s)	432, 1362
NmuCI	GTSAC	3 cut(s)	402, 407, 1267
NsiI	ATGCAT	2 cut(s)	874, 1162
PagI	TCATGA	1 cut(s)	904
PcsI	WCGNNNNNNNCGW	3 cut(s)	324, 363, 447
PctI	GAATGC	1 cut(s)	1519
PfeI	GAWTC	3 cut(s)	547, 664, 742
PleI	GAGTC	1 cut(s)	1309
PmaCI	CACGTG	2 cut(s)	407, 493
PmlI	CACGTG	2 cut(s)	407, 493
PpsI	GAGTC	1 cut(s)	1309
Ppu21I	YACGTR	3 cut(s)	407, 493, 565
PsiI	TTATAA	1 cut(s)	1020
Psp6I	CCWGG	1 cut(s)	372
PspCI	CACGTG	2 cut(s)	407, 493
PspFI	CCCAGC	1 cut(s)	779
PspGI	CCWGG	1 cut(s)	372
PspN4I	GGNNCC	2 cut(s)	432, 1362
PspPI	GGNCC	4 cut(s)	376, 396, 431, 570
PsrI	GAACNNNNNNTAC	2 cut(s)	1412, 1444
PstI	CTGCAG	1 cut(s)	1151
PstNI	CAGNNNCTG	1 cut(s)	1437
RsaI	GTAC	4 cut(s)	437, 563, 749, 1229
RsaNI	GTAC	4 cut(s)	436, 562, 748, 1228
RseI	CAYNNNNRTG	1 cut(s)	1235
SalI	GTCGAC	2 cut(s)	449, 1309
SaqAI	TTAA	8 cut(s)	11, 603, 762, 960, 1116, 1283, 1388, 1466
Sau3AI	GATC	2 cut(s)	495, 951
Sau96I	GGNCC	4 cut(s)	376, 396, 431, 570
SchI	GAGTC	1 cut(s)	1310
ScrFI	CCNGG	2 cut(s)	374, 429
SduI	GDGCHC	4 cut(s)	423, 597, 1219, 1326
SfaNI	GCATC	5 cut(s)	369, 859, 919, 1031, 1169
SfcI	CTRYAG	2 cut(s)	1147, 1438
SmiMI	CAYNNNNRTG	1 cut(s)	1235
SmlI	CTYRAG	1 cut(s)	1325
SmoI	CTYRAG	1 cut(s)	1325
Sse9I	AATT	6 cut(s)	63, 525, 725, 1066, 1126, 1541
SspMI	CTAG	1 cut(s)	753
StyD4I	CCNGG	2 cut(s)	372, 427
TaaI	ACNGT	5 cut(s)	425, 532, 608, 1267, 1524
TaiI	ACGT	4 cut(s)	404, 409, 495, 567
TasI	AATT	6 cut(s)	63, 525, 725, 1066, 1126, 1541
TatI	WGTACW	2 cut(s)	747, 1227
TauI	GCSGC	8 cut(s)	8, 39, 296, 299, 327, 345, 348, 827
TfiI	GAWTC	3 cut(s)	547, 664, 742
Tru1I	TTAA	8 cut(s)	11, 603, 762, 960, 1116, 1283, 1388, 1466
Tru9I	TTAA	8 cut(s)	11, 603, 762, 960, 1116, 1283, 1388, 1466
TscAI	CASTG	1 cut(s)	1272
TseFI	GTSAC	3 cut(s)	402, 407, 1267
TseI	GCWGC	3 cut(s)	581, 1146, 1149
Tsp45I	GTSAC	3 cut(s)	402, 407, 1267
TspDTI	ATGAA	6 cut(s)	521, 833, 968, 1043, 1253, 1368
TspRI	CASTG	1 cut(s)	1272
VneI	GTGCAC	1 cut(s)	593
XapI	RAATTY	3 cut(s)	63, 725, 1126
XmiI	GTMKAC	2 cut(s)	450, 1310
XspI	CTAG	1 cut(s)	753
Zsp2I	ATGCAT	2 cut(s)	874, 1162

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.