Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0014352

Physical Location & Seq

Genomic Coordinates Reverse (-)

6508819 .. 6521193

Gene Structure 12375 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00164520.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1608 bp

ATGGCCGCCTTAACCAAGCCTCTCCGCCGCTTTCTCTCTCCTCTCTCTCAACGAATTCTCAATCCCTCTTCTCTCTCTTCAGCTCCAGAGCCTCATCTCCAAGACGACGACGATACTTCCCAAACTGCCCCCAACTTAGCCACCGACGAAACCCTAATCGCCGACACATTCCACTCCCTAATCAAAGACCACCACCGCAACAACCCTAACCCTAACCCCAGCCCTACTCCTCCAAACCCTACCTACACAATCCCTTCTCTCTCCTCCGACTTCTCCCAACTCTCCGCCGCCGCCTCCATTTCTCCGGCCGTCGTCCGCCGCGTCATCGAGAAATGCGGCGGCGTCCGCCATGGCATCCCCGTCCTCCAGGCCCTCGCCTTCTTCAACTGGGCCACGTCACGCGACGGCTTCGAGCACAGTCCGGAGCCGTACAACGAAATGGTCGACCTCGCCGGAAAGGTAAGGCAGTTCGATTTGGCTTGGCACGTGATCGACTTGATGAAAGCTGGGAATGTTGAAATTACGGTTGAGACATTCTCGATTCTTGTGCGCCGGTACGTAAGGGCCGGATTGGCTGCGGAGGCGGTGCACGCGTTTAACCGTATGGAGGAGTATGGTGTCAATCCTGATAGGATTGCTTTCTCGGTTGTGATTGGGATTCTCTGTAAGAAGAGAAGGGCAAGTGAAGCGCAGGCGTTTTTCGATAGCTTGAAGCATAAATTCGAGGCTGATGTGATTCTGTACACTAGCTTGGTTAATGGATGGTGTAGAGCTGGGAATATATCAGAGGCAGAGAGGGTGTTTAGGGAGATGAAGGCGGCGGGGATTGAGCCGAATGTATATAGTTACAGCATTGTGATAGATGCATTGTGTAGGTGTGGACAGATTACTCGCGCTCATGATGTTTTCGCGGAGATGATTGATGCAGGTTGCAATCCAAACTCGATCACTTTTAACAATCTAATGAGAGTTCATGTGAAGGCTGGACGAACTGAAAAGGTGTTGCAGGTTTATAATCAGATGAAGAGGTTGGGATGCAATGCGGATTTGATTACTTACAATTTTCTTATAGAGTGTCATTGTAAGGATGAGAATGTTGAAGAGGCTGTTAAGGTACTGAATTTGATGGTGAAGAAAGGCTGCAGCCCTAACGCATCGACTTTCAATCCCATATTTCGGTGGTGCATTGCGAAGCTGAAGGATGTGAATGGTGCTCACAGGATGTACACTAAGATGAAGGATTTGGATTGCAAGGCGAACACAGTGACCTACAATGTGTTAATGCAGATGTTTTATTGTTACAAAACACTCACTCTACACCTACGGCAAAAAGACGAGGGAAAGGGGAAGGCAGTAGAACCAAACTTTTGGACACTGAAAGTTATAAAATCTTTAAAGAATAAATCCGGAAACCTAAAGCCAGCTGAAACTTTCTTCATGGAAGTTGTAGAGGACGAAGAATTGAAGGTTATCGGTCCTTTATATTCAGGGTGGCTCCGAAGATTAAGGAATGCTGCTATAAAGAAAAGAAATTCGGAAATCAAGGGCCTACGAGTGATGCGAGGCTATCGGTTTCACCCAACCAAGGAGCATGGAGGCCCAACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

535

Amino Acids

60.27

Weight (kDa)

9.05

Isoelectric Point (pI)

39.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_24	PF23276	149 - 238	2.4e-06	Fungal tetratrico peptide repeats
PPR_long	PF17177	231 - 342	3.9e-11	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	240 - 289	7.4e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	242 - 272	9.3e-11	PPR repeat
PPR_2	PF13041	244 - 292	5.5e-17	PPR repeat family
PPR	PF01535	247 - 276	1.5e-07	PPR repeat
PPR_3	PF13812	275 - 326	1.2e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	275 - 306	2.7e-09	PPR repeat
PPR	PF01535	281 - 311	2.7e-06	PPR repeat
PPR_2	PF13041	285 - 323	2.5e-09	PPR repeat family
PPR_2	PF13041	313 - 362	5.9e-14	PPR repeat family
PPR	PF01535	316 - 346	2.2e-06	PPR repeat
TPR_24	PF23276	328 - 436	1.9e-11	Fungal tetratrico peptide repeats
PPR_3	PF13812	337 - 395	1.3e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	345 - 377	1.4e-09	PPR repeat
PPR_2	PF13041	349 - 395	9.1e-14	PPR repeat family
PPR	PF01535	351 - 381	2.4e-07	PPR repeat
PPR_2	PF13041	387 - 431	1.4e-06	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0014352)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20300
fragaria_vesca	FvH4_2g37970
prunus_persica	Prupe.1G359600_v2.0.a1
pyrus_communis	pycom08g00640 pycom15g00550
rosa_chinensis	RchiOBHm_Chr6g0303651
rosa_laevigata	RLG00000011063
rosa_multiflora	Rmu_co8419065.1_g000001 Rmu_sc0013443.1_g000006 Rmu_ssc0000114.1_g000016
rosa_roxburghii	Rroxscaffold_7G00164520
rosa_rugosa	Rorug06G0323400
rosa_samantha	Rh6AG437700 Rh6BG465400 Rh6CG449800 Rh6DG436600
rosa_wichuraiana	Rw6G037890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1014, 1385
Acc36I	ACCTGC	2 cut(s)	917, 997
AccI	GTMKAC	1 cut(s)	444
AccII	CGCG	5 cut(s)	321, 402, 593, 894, 911
AccIII	TCCGGA	2 cut(s)	421, 1406
AcoI	YGGCCR	2 cut(s)	3, 306
AcsI	RAATTY	4 cut(s)	54, 719, 1120, 1531
AcuI	CTGAAG	2 cut(s)	63, 1217
AcvI	CACGTG	1 cut(s)	487
AcyI	GRCGYC	1 cut(s)	342
AfaI	GTAC	5 cut(s)	431, 557, 743, 1116, 1226
AfiI	CCNNNNNNNGG	3 cut(s)	607, 1176, 1585
AflIII	ACRYGT	1 cut(s)	591
AgsI	TTSAA	6 cut(s)	385, 518, 712, 1100, 1165, 1465
AjiI	CACGTC	1 cut(s)	396
AjnI	CCWGG	1 cut(s)	366
AluBI	AGCT	7 cut(s)	83, 506, 708, 750, 773, 1195, 1424
AluI	AGCT	7 cut(s)	83, 506, 708, 750, 773, 1195, 1424
Alw21I	GWGCWC	3 cut(s)	417, 591, 1216
Alw26I	GTCTC	1 cut(s)	524
Alw44I	GTGCAC	1 cut(s)	587
Aor13HI	TCCGGA	2 cut(s)	421, 1406
AoxI	GGCC	7 cut(s)	3, 306, 369, 390, 564, 1546, 1597
ApaLI	GTGCAC	1 cut(s)	587
ApeKI	GCWGC	4 cut(s)	575, 1140, 1143, 1514
ApoI	RAATTY	4 cut(s)	54, 719, 1120, 1531
AspLEI	GCGC	3 cut(s)	552, 691, 896
AspS9I	GGNCC	6 cut(s)	370, 390, 564, 1475, 1546, 1598
AsuHPI	GGTGA	2 cut(s)	1141, 1568
AvaII	GGWCC	1 cut(s)	1475
BaeGI	GKGCMC	1 cut(s)	591
BbrPI	CACGTG	1 cut(s)	487
Bbv12I	GWGCWC	3 cut(s)	417, 591, 1216
BbvI	GCAGC	4 cut(s)	562, 1127, 1155, 1501
BccI	CCATC	2 cut(s)	756, 1120
BceAI	ACGGC	4 cut(s)	293, 412, 421, 1340
BcgI	CGANNNNNNTGC	2 cut(s)	529, 563
BciT130I	CCWGG	1 cut(s)	368
BcoDI	GTCTC	1 cut(s)	524
BfaI	CTAG	1 cut(s)	747
BfmI	CTRYAG	1 cut(s)	1141
BfuAI	ACCTGC	2 cut(s)	917, 997
BglI	GCCNNNNNGGC	1 cut(s)	572
Bme1390I	CCNGG	1 cut(s)	368
Bme18I	GGWCC	1 cut(s)	1475
BmgBI	CACGTC	1 cut(s)	396
BmgT120I	GGNCC	6 cut(s)	370, 390, 564, 1475, 1546, 1598
BmiI	GGNNCC	2 cut(s)	426, 1496
BmrFI	CCNGG	1 cut(s)	368
BmrI	ACTGGG	1 cut(s)	397
BmsI	GCATC	6 cut(s)	363, 853, 913, 1025, 1163, 1548
BmuI	ACTGGG	1 cut(s)	397
BplI	GAGNNNNNCTC	2 cut(s)	521, 553
BpmI	CTGGAG	2 cut(s)	69, 350
BsaAI	YACGTR	2 cut(s)	487, 559
BsaHI	GRCGYC	1 cut(s)	342
BsaJI	CCNNGG	2 cut(s)	349, 1584
BsaWI	WCCGGW	2 cut(s)	421, 1406
Bsc4I	CCNNNNNNNGG	3 cut(s)	607, 1176, 1585
Bse118I	RCCGGY	1 cut(s)	552
Bse1I	ACTGG	1 cut(s)	392
Bse3DI	GCAATG	2 cut(s)	1045, 1185
BseAI	TCCGGA	2 cut(s)	421, 1406
BseBI	CCWGG	1 cut(s)	368
BseDI	CCNNGG	2 cut(s)	349, 1584
BseGI	GGATG	6 cut(s)	354, 767, 1040, 1093, 1207, 1227
BseLI	CCNNNNNNNGG	3 cut(s)	607, 1176, 1585
BseMI	GCAATG	2 cut(s)	1045, 1185
BseNI	ACTGG	1 cut(s)	392
BseRI	GAGGAG	4 cut(s)	30, 219, 253, 623
BseSI	GKGCMC	1 cut(s)	591
BseX3I	CGGCCG	1 cut(s)	306
BseXI	GCAGC	4 cut(s)	562, 1127, 1155, 1501
BseYI	CCCAGC	3 cut(s)	218, 506, 773
Bsh1236I	CGCG	5 cut(s)	321, 402, 593, 894, 911
Bsh1285I	CGRYCG	1 cut(s)	309
BshFI	GGCC	7 cut(s)	5, 308, 371, 392, 566, 1548, 1599
BsiEI	CGRYCG	1 cut(s)	309
BsiHKAI	GWGCWC	3 cut(s)	417, 591, 1216
BsiSI	CCGG	6 cut(s)	305, 422, 453, 553, 567, 1407
BslI	CCNNNNNNNGG	3 cut(s)	607, 1176, 1585
BsmAI	GTCTC	1 cut(s)	524
BsmI	GAATGC	1 cut(s)	1516
BsnI	GGCC	7 cut(s)	5, 308, 371, 392, 566, 1548, 1599
Bsp1286I	GDGCHC	3 cut(s)	417, 591, 1216
Bsp13I	TCCGGA	2 cut(s)	421, 1406
Bsp1407I	TGTACA	2 cut(s)	741, 1224
Bsp143I	GATC	2 cut(s)	489, 945
Bsp19I	CCATGG	1 cut(s)	349
BspANI	GGCC	7 cut(s)	5, 308, 371, 392, 566, 1548, 1599
BspEI	TCCGGA	2 cut(s)	421, 1406
BspFNI	CGCG	5 cut(s)	321, 402, 593, 894, 911
BspHI	TCATGA	1 cut(s)	898
BspLI	GGNNCC	2 cut(s)	426, 1496
BspMAI	CTGCAG	1 cut(s)	1145
BspMI	ACCTGC	2 cut(s)	917, 997
BsrDI	GCAATG	2 cut(s)	1045, 1185
BsrFI	RCCGGY	1 cut(s)	552
BsrGI	TGTACA	2 cut(s)	741, 1224
BsrI	ACTGG	1 cut(s)	392
BssAI	RCCGGY	1 cut(s)	552
BssECI	CCNNGG	2 cut(s)	349, 1584
BssMI	GATC	2 cut(s)	489, 945
BssNI	GRCGYC	1 cut(s)	342
BssT1I	CCWWGG	2 cut(s)	349, 1584
Bst2UI	CCWGG	1 cut(s)	368
Bst4CI	ACNGT	4 cut(s)	419, 526, 602, 1264
Bst6I	CTCTTC	5 cut(s)	73, 82, 665, 1019, 1095
BstACI	GRCGYC	1 cut(s)	342
BstAUI	TGTACA	2 cut(s)	741, 1224
BstBAI	YACGTR	2 cut(s)	487, 559
BstC8I	GCNNGC	3 cut(s)	591, 693, 1422
BstDEI	CTNAG	2 cut(s)	136, 1230
BstDSI	CCRYGG	1 cut(s)	349
BstF5I	GGATG	6 cut(s)	354, 767, 1040, 1093, 1207, 1227
BstFNI	CGCG	5 cut(s)	321, 402, 593, 894, 911
BstHHI	GCGC	3 cut(s)	552, 691, 896
BstKTI	GATC	2 cut(s)	492, 948
BstMAI	GTCTC	1 cut(s)	524
BstMBI	GATC	2 cut(s)	489, 945
BstMCI	CGRYCG	1 cut(s)	309
BstMWI	GCNNNNNNNGC	5 cut(s)	345, 572, 581, 590, 686
BstNI	CCWGG	1 cut(s)	368
BstSCI	CCNGG	1 cut(s)	366
BstSFI	CTRYAG	1 cut(s)	1141
BstSLI	GKGCMC	1 cut(s)	591
BstSNI	TACGTA	1 cut(s)	559
BstUI	CGCG	5 cut(s)	321, 402, 593, 894, 911
BstV1I	GCAGC	4 cut(s)	562, 1127, 1155, 1501
BstXI	CCANNNNNNTGG	1 cut(s)	1368
BstZI	CGGCCG	1 cut(s)	306
BsuRI	GGCC	7 cut(s)	5, 308, 371, 392, 566, 1548, 1599
BtgI	CCRYGG	1 cut(s)	349
BtrI	CACGTC	1 cut(s)	396
BtsCI	GGATG	6 cut(s)	354, 767, 1040, 1093, 1207, 1227
BtsIMutI	CAGTG	2 cut(s)	1269, 1373
BveI	ACCTGC	2 cut(s)	917, 997
Cac8I	GCNNGC	3 cut(s)	591, 693, 1422
CciI	TCATGA	1 cut(s)	898
CfoI	GCGC	3 cut(s)	552, 691, 896
Cfr10I	RCCGGY	1 cut(s)	552
Cfr13I	GGNCC	6 cut(s)	370, 390, 564, 1475, 1546, 1598
CseI	GACGC	2 cut(s)	310, 331
Csp6I	GTAC	5 cut(s)	430, 556, 742, 1115, 1225
CviAII	CATG	5 cut(s)	350, 899, 974, 1438, 1592
CviQI	GTAC	5 cut(s)	430, 556, 742, 1115, 1225
DdeI	CTNAG	2 cut(s)	136, 1230
DpnI	GATC	2 cut(s)	491, 947
DpnII	GATC	2 cut(s)	489, 945
DraI	TTTAAA	1 cut(s)	1395
EaeI	YGGCCR	2 cut(s)	3, 306
EagI	CGGCCG	1 cut(s)	306
Eam1104I	CTCTTC	5 cut(s)	73, 82, 665, 1019, 1095
EarI	CTCTTC	5 cut(s)	73, 82, 665, 1019, 1095
EciI	GGCGGA	4 cut(s)	14, 274, 305, 335
EclXI	CGGCCG	1 cut(s)	306
Eco105I	TACGTA	1 cut(s)	559
Eco130I	CCWWGG	2 cut(s)	349, 1584
Eco47I	GGWCC	1 cut(s)	1475
Eco52I	CGGCCG	1 cut(s)	306
Eco57I	CTGAAG	2 cut(s)	63, 1217
Eco72I	CACGTG	1 cut(s)	487
EcoO109I	RGGNCCY	2 cut(s)	370, 1546
EcoRI	GAATTC	1 cut(s)	54
EcoRII	CCWGG	1 cut(s)	366
EcoT14I	CCWWGG	2 cut(s)	349, 1584
EcoT22I	ATGCAT	1 cut(s)	868
ErhI	CCWWGG	2 cut(s)	349, 1584
FaeI	CATG	5 cut(s)	353, 902, 977, 1441, 1595
FatI	CATG	5 cut(s)	349, 898, 973, 1437, 1591
FauI	CCCGC	1 cut(s)	814
FblI	GTMKAC	1 cut(s)	444
FokI	GGATG	6 cut(s)	341, 774, 1047, 1100, 1214, 1234
FspBI	CTAG	1 cut(s)	747
GlaI	GCGC	3 cut(s)	551, 690, 895
GsaI	CCCAGC	3 cut(s)	222, 510, 777
GsuI	CTGGAG	2 cut(s)	69, 350
HaeIII	GGCC	7 cut(s)	5, 308, 371, 392, 566, 1548, 1599
HapII	CCGG	6 cut(s)	305, 422, 453, 553, 567, 1407
HgaI	GACGC	2 cut(s)	310, 331
HhaI	GCGC	3 cut(s)	552, 691, 896
Hin1I	GRCGYC	1 cut(s)	342
Hin1II	CATG	5 cut(s)	353, 902, 977, 1441, 1595
Hin6I	GCGC	3 cut(s)	550, 689, 894
HinP1I	GCGC	3 cut(s)	550, 689, 894
HincII	GTYRAC	1 cut(s)	445
HindII	GTYRAC	1 cut(s)	445
HinfI	GANTC	3 cut(s)	541, 658, 736
HpaII	CCGG	6 cut(s)	305, 422, 453, 553, 567, 1407
HphI	GGTGA	2 cut(s)	1141, 1568
Hpy166II	GTNNAC	5 cut(s)	445, 589, 744, 881, 1227
Hpy188I	TCNGA	5 cut(s)	268, 787, 1020, 1499, 1537
Hpy188III	TCNNGA	7 cut(s)	86, 328, 422, 538, 626, 899, 1407
Hpy8I	GTNNAC	5 cut(s)	445, 589, 744, 881, 1227
Hpy99I	CGWCG	5 cut(s)	110, 113, 149, 314, 407
HpyAV	CCTTC	9 cut(s)	264, 388, 669, 808, 973, 1192, 1231, 1342, 1459
HpyCH4III	ACNGT	4 cut(s)	419, 526, 602, 1264
HpyCH4IV	ACGT	3 cut(s)	395, 486, 558
HpyF10VI	GCNNNNNNNGC	5 cut(s)	345, 572, 581, 590, 686
HpyF3I	CTNAG	2 cut(s)	136, 1230
HpySE526I	ACGT	3 cut(s)	395, 486, 558
Hsp92I	GRCGYC	1 cut(s)	342
Hsp92II	CATG	5 cut(s)	353, 902, 977, 1441, 1595
HspAI	GCGC	3 cut(s)	550, 689, 894
Kpn2I	TCCGGA	2 cut(s)	421, 1406
Kzo9I	GATC	2 cut(s)	489, 945
LmnI	GCTCC	4 cut(s)	88, 424, 1500, 1588
Lsp1109I	GCAGC	4 cut(s)	562, 1127, 1155, 1501
LweI	GCATC	6 cut(s)	363, 853, 913, 1025, 1163, 1548
MaeI	CTAG	1 cut(s)	747
MaeII	ACGT	3 cut(s)	395, 486, 558
MaeIII	GTNAC	4 cut(s)	396, 845, 1264, 1298
MalI	GATC	2 cut(s)	491, 947
MboI	GATC	2 cut(s)	489, 945
MhlI	GDGCHC	3 cut(s)	417, 591, 1216
MluCI	AATT	7 cut(s)	54, 519, 719, 1060, 1120, 1460, 1531
MluI	ACGCGT	1 cut(s)	591
MmeI	TCCRAC	1 cut(s)	291
Mph1103I	ATGCAT	1 cut(s)	868
MroI	TCCGGA	2 cut(s)	421, 1406
MseI	TTAA	8 cut(s)	11, 597, 756, 954, 1110, 1280, 1394, 1505
MslI	CAYNNNNRTG	1 cut(s)	1232
MspA1I	CMGCKG	1 cut(s)	1424
MspI	CCGG	6 cut(s)	305, 422, 453, 553, 567, 1407
MspR9I	CCNGG	1 cut(s)	368
Mva1269I	GAATGC	1 cut(s)	1516
MvaI	CCWGG	1 cut(s)	368
MvnI	CGCG	5 cut(s)	321, 402, 593, 894, 911
MwoI	GCNNNNNNNGC	5 cut(s)	345, 572, 581, 590, 686
NcoI	CCATGG	1 cut(s)	349
NdeII	GATC	2 cut(s)	489, 945
NlaIII	CATG	5 cut(s)	353, 902, 977, 1441, 1595
NlaIV	GGNNCC	2 cut(s)	426, 1496
NmuCI	GTSAC	2 cut(s)	396, 1264
NsiI	ATGCAT	1 cut(s)	868
PagI	TCATGA	1 cut(s)	898
PcsI	WCGNNNNNNNCGW	3 cut(s)	318, 441, 1558
PctI	GAATGC	1 cut(s)	1516
PfeI	GAWTC	3 cut(s)	541, 658, 736
PmaCI	CACGTG	1 cut(s)	487
PmlI	CACGTG	1 cut(s)	487
Ppu21I	YACGTR	2 cut(s)	487, 559
PsiI	TTATAA	2 cut(s)	1014, 1385
Psp6I	CCWGG	1 cut(s)	366
PspCI	CACGTG	1 cut(s)	487
PspFI	CCCAGC	3 cut(s)	218, 506, 773
PspGI	CCWGG	1 cut(s)	366
PspN4I	GGNNCC	2 cut(s)	426, 1496
PspPI	GGNCC	6 cut(s)	370, 390, 564, 1475, 1546, 1598
PstI	CTGCAG	1 cut(s)	1145
PvuII	CAGCTG	1 cut(s)	1424
RsaI	GTAC	5 cut(s)	431, 557, 743, 1116, 1226
RsaNI	GTAC	5 cut(s)	430, 556, 742, 1115, 1225
RseI	CAYNNNNRTG	1 cut(s)	1232
SalI	GTCGAC	1 cut(s)	443
SaqAI	TTAA	8 cut(s)	11, 597, 756, 954, 1110, 1280, 1394, 1505
Sau3AI	GATC	2 cut(s)	489, 945
Sau96I	GGNCC	6 cut(s)	370, 390, 564, 1475, 1546, 1598
ScrFI	CCNGG	1 cut(s)	368
SduI	GDGCHC	3 cut(s)	417, 591, 1216
SfaNI	GCATC	6 cut(s)	363, 853, 913, 1025, 1163, 1548
SfcI	CTRYAG	1 cut(s)	1141
SinI	GGWCC	1 cut(s)	1475
SmiMI	CAYNNNNRTG	1 cut(s)	1232
SnaBI	TACGTA	1 cut(s)	559
Sse9I	AATT	7 cut(s)	54, 519, 719, 1060, 1120, 1460, 1531
SspMI	CTAG	1 cut(s)	747
StyD4I	CCNGG	1 cut(s)	366
StyI	CCWWGG	2 cut(s)	349, 1584
TaaI	ACNGT	4 cut(s)	419, 526, 602, 1264
TaiI	ACGT	3 cut(s)	398, 489, 561
TaqII	GACCGA	1 cut(s)	1463
TasI	AATT	7 cut(s)	54, 519, 719, 1060, 1120, 1460, 1531
TatI	WGTACW	2 cut(s)	741, 1224
TauI	GCSGC	8 cut(s)	8, 30, 290, 293, 321, 339, 342, 821
TfiI	GAWTC	3 cut(s)	541, 658, 736
Tru1I	TTAA	8 cut(s)	11, 597, 756, 954, 1110, 1280, 1394, 1505
Tru9I	TTAA	8 cut(s)	11, 597, 756, 954, 1110, 1280, 1394, 1505
TscAI	CASTG	2 cut(s)	1269, 1380
TseFI	GTSAC	2 cut(s)	396, 1264
TseI	GCWGC	4 cut(s)	575, 1140, 1143, 1514
Tsp45I	GTSAC	2 cut(s)	396, 1264
TspDTI	ATGAA	6 cut(s)	515, 827, 962, 1037, 1250, 1426
TspRI	CASTG	2 cut(s)	1269, 1380
VneI	GTGCAC	1 cut(s)	587
VpaK11BI	GGWCC	1 cut(s)	1475
XapI	RAATTY	4 cut(s)	54, 719, 1120, 1531
XmiI	GTMKAC	1 cut(s)	444
XspI	CTAG	1 cut(s)	747
Zsp2I	ATGCAT	1 cut(s)	868

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.