FvH4_3g02410

Chaperone protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0008846
Physical Location & Seq
Reverse (-)
1209686 .. 1214038
4353 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g02410.t4

Sequence Viewer

Length: 2001 bp
ATGACAGAGATTGATGTAGAGCTGTGCATGGAGGAGTTTGTGGCGAAAGTCGAGGTGGAGGATCAGGAGAAGCTGGAGCTGGAGTATGGTGTTGAAATCGCACCAGAGGCCGTGGTGTATGCGTGTCGAATCATTAGGCAGTACCCTGATGCTTTTCAGTTTAATTTTAGAGGAACACTGGATGATAGCCAGAGGGCGATTTTGCAAATAAAGGTAGTGGAGCTTTTGGATGAGGCTTGTTTAAGATTGAGGCAGAGGTTTGACTACTCGAGAGAAGGAGAGGATGAACTAGAGGTTGGGGAGTACAGGCTGCATCGTGCACTTGTTGAGTTGGGTGAGATTGAAAAAGAAAGAGAGCCATCCACCCAAAAGTGGAGGGATCGTGTGGCCAAGGAACGTGAAGAACTAAACGATGTTTGGAACACGTTGGAGATTAAGTGGTTGGAATTACAAGCTTCGCGGCAGAGATATGACATCAGAGCTCGCGAGGCACTTTTGCTGGAAAGGATGCGCGAAGGGCTGGTTTACTATTTAAATGAGGAAAGAACAAAGGAAAATTTCTCCTGGATATTGCAATGGCTTGATGAACATGTGACTGAGCTTTTATATACAACTCGCAAAGATTTTAAGCATGAGCTGACAGTTAGCTCACATGTTATCGCAGTGGCAGCAAGCTTGTTCATTGATGCTCCACCACCACAGTTGCTTTCCGATTCACTACTTCAGAACCCTGAATCAATTAGGAGGGTAATTGGACAAGATCATGTTCTACTTGCAGTCAGTGCTGCTTTATCGAGGCAGAGGCCTCCACGACGCCCTATTGGATCCTTCATCTTCATGTGTGGATCTGGTTGTGGAAGGACAGAATTTGCCAAACTTCTGGCCACTCTTGTCTTTGGTAAGAAAGACATGCTAACTGAGTTTGATCTAGAAAAGTACACAGGACCGAATTCTGTATCACGCCTACGTGGTGTTCTCTGTAGTAGCCAGATTGAGCCAGGCAAGAAGGGAGAGCTAGGTGTTAAGAAGAGGCATATAGGTGTAGTTTTGTTTGACAATGTTGACAAGGCTCCTGGGACTATTATTGACCTTTTGACCCAGATTATAGGCTTTGGTCATCTAGTAGATGGTAATGGGAATACCGTTGACTTCACTAATACGATGATCATCATGACAACAAATATTGGATGTGATCAATTGTGGCCTTGGAATTGCAAATGTGCTGATGAAGTTCAAAAGTTTCCTGTCAAAGAAGGATTATTTGATGATGCATGGGAAAGAAATCATAATTCCTGCTACCTATCACTTCTGAGGGAGACAAAAAATCATTTTGGACCTCAATTTCTTGAATACGTAGATGATGTGATTGGATTTAGGTCTCTTTCCTCTCAACAGTTGAAGGCTGTTGCTAGGCTCCAGCTGCGGGACCTTGCCTTGTGCATAATCCAGAAAGGCATCATCATTTACTCCTCTGAAGCTGCATTGGATGTTATTGTGCGGAGATCAACTTGGCCCGGAGATCGAATAAAAGGTGGAGAGAAAATAAGGATGTGGCTGGAACAGAACTTGGTCCCTGTGCTCTTTGAGATGATTTCAAAGAATGAGATATCTGATTTATCGATCATGTATATCGAAGCGTCAGTGCAGACGGATCAACTATCTTTCAGAATGGAAAAGACTGGACGTCTATTGGAAGAACGAGACGTTAATCAGTTAGCCTCTTTAAAGGAATTGAGGTTAATGTATCAGAAAGAGAAAGAAAGAGCAAAGAGAATCTACATGCTGAGAAAATTTCAGAACAAATTGTTGGCTAGTGCAAATGCTGGGTTTGATCATGTTACGCATGTTATTCAAGATCTGGTCAATTTAATTCAGGATCTCATTACAATTCCTGGTAGCATCATCAGGTCCTTCCTGGATAATCCTAAAAAGGTGGCAATGGCAGCCTTGAACGAGGATGAGGTTAGGCAGAACAAGAGGGCGAAAAGAGGGACCAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04213 map04213
Pfam Domains
Protein Families
AAA_2

Protein Analysis

667

Amino Acids

76.77

Weight (kDa)

5.79

Isoelectric Point (pI)

41.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_2 PF07724 272 - 450 5.3e-23 AAA domain (Cdc48 subfamily)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1687
AccII CGCG 3 cut(s) 460, 486, 513
AciI CCGC 3 cut(s) 460, 1423, 1498
AclWI GGATC 7 cut(s) 69, 387, 819, 832, 853, 1659, 1884
AcoI YGGCCR 2 cut(s) 387, 882
AcsI RAATTY 4 cut(s) 556, 866, 949, 1790
AcuI CTGAAG 2 cut(s) 707, 1494
AcyI GRCGYC 2 cut(s) 814, 1684
AfaI GTAC 3 cut(s) 143, 305, 938
AfiI CCNNNNNNNGG 2 cut(s) 372, 1423
AflIII ACRYGT 3 cut(s) 423, 589, 652
AgsI TTSAA 8 cut(s) 95, 344, 1235, 1349, 1399, 1596, 1853, 1951
AhdI GACNNNNNGTC 1 cut(s) 1683
AjnI CCWGG 5 cut(s) 563, 997, 1072, 1891, 1914
AjuI GAANNNNNNNTTGG 4 cut(s) 279, 311, 1790, 1822
Alw21I GWGCWC 3 cut(s) 322, 484, 1581
Alw26I GTCTC 3 cut(s) 1310, 1383, 1695
Alw44I GTGCAC 1 cut(s) 318
AlwI GGATC 7 cut(s) 69, 387, 819, 832, 853, 1659, 1884
Ama87I CYCGRG 1 cut(s) 268
AoxI GGCC 6 cut(s) 108, 387, 803, 882, 1202, 1511
ApaLI GTGCAC 1 cut(s) 318
ApeKI GCWGC 6 cut(s) 310, 668, 785, 1420, 1478, 1943
ApoI RAATTY 4 cut(s) 556, 866, 949, 1790
AspLEI GCGC 1 cut(s) 513
AspS9I GGNCC 7 cut(s) 944, 1334, 1426, 1512, 1570, 1908, 1992
AsuC2I CCSGG 1 cut(s) 1515
AsuHPI GGTGA 1 cut(s) 347
AvaI CYCGRG 1 cut(s) 268
AvaII GGWCC 6 cut(s) 944, 1334, 1426, 1570, 1908, 1992
BaeGI GKGCMC 1 cut(s) 322
BalI TGGCCA 2 cut(s) 389, 884
BamHI GGATCC 1 cut(s) 824
BanII GRGCYC 1 cut(s) 484
Bbv12I GWGCWC 3 cut(s) 322, 484, 1581
BbvI GCAGC 6 cut(s) 297, 680, 772, 1407, 1465, 1955
BccI CCATC 2 cut(s) 367, 1121
BceAI ACGGC 1 cut(s) 95
BciT130I CCWGG 5 cut(s) 565, 999, 1074, 1893, 1916
BclI TGATCA 3 cut(s) 1164, 1192, 1831
BcnI CCSGG 1 cut(s) 1515
BcoDI GTCTC 3 cut(s) 1310, 1383, 1695
BfaI CTAG 6 cut(s) 290, 929, 1016, 1121, 1410, 1812
BfmI CTRYAG 1 cut(s) 979
BglII AGATCT 1 cut(s) 1855
BisI GCNGC 7 cut(s) 311, 461, 669, 786, 1421, 1479, 1944
BlsI GCNGC 7 cut(s) 312, 462, 670, 787, 1422, 1480, 1945
Bme1390I CCNGG 6 cut(s) 565, 999, 1074, 1515, 1893, 1916
Bme18I GGWCC 6 cut(s) 944, 1334, 1426, 1570, 1908, 1992
BmeRI GACNNNNNGTC 1 cut(s) 1683
BmeT110I CYCGRG 1 cut(s) 268
BmgT120I GGNCC 7 cut(s) 944, 1334, 1426, 1512, 1570, 1908, 1992
BmiI GGNNCC 6 cut(s) 826, 1071, 1415, 1427, 1572, 1993
BmrFI CCNGG 6 cut(s) 565, 999, 1074, 1515, 1893, 1916
BmsI GCATC 7 cut(s) 139, 322, 498, 676, 1258, 1464, 1908
BpmI CTGGAG 3 cut(s) 95, 101, 1400
BpuMI CCSGG 1 cut(s) 1515
Bsa29I ATCGAT 1 cut(s) 1619
BsaAI YACGTR 2 cut(s) 968, 1354
BsaBI GATNNNNATC 1 cut(s) 1166
BsaHI GRCGYC 2 cut(s) 814, 1684
BsaI GGTCTC 1 cut(s) 1383
BsaJI CCNNGG 4 cut(s) 111, 390, 1073, 1205
BsaXI ACNNNNNCTCC 6 cut(s) 68, 98, 367, 397, 422, 452
Bsc4I CCNNNNNNNGG 2 cut(s) 372, 1423
Bse1I ACTGG 2 cut(s) 183, 1684
Bse3DI GCAATG 2 cut(s) 581, 1944
Bse8I GATNNNNATC 1 cut(s) 1166
BseBI CCWGG 5 cut(s) 565, 999, 1074, 1893, 1916
BseCI ATCGAT 1 cut(s) 1619
BseDI CCNNGG 4 cut(s) 111, 390, 1073, 1205
BseGI GGATG 9 cut(s) 187, 235, 289, 359, 513, 1193, 1492, 1554, 1963
BseJI GATNNNNATC 1 cut(s) 1166
BseLI CCNNNNNNNGG 2 cut(s) 372, 1423
BseMI GCAATG 2 cut(s) 581, 1944
BseMII CTCAG 4 cut(s) 588, 909, 1301, 1775
BseNI ACTGG 2 cut(s) 183, 1684
BseRI GAGGAG 2 cut(s) 47, 1459
BseSI GKGCMC 1 cut(s) 322
BseXI GCAGC 6 cut(s) 297, 680, 772, 1407, 1465, 1955
BseYI CCCAGC 1 cut(s) 1823
BsgI GTGCAG 1 cut(s) 1664
Bsh1236I CGCG 3 cut(s) 460, 486, 513
BshFI GGCC 6 cut(s) 110, 389, 805, 884, 1204, 1513
BshVI ATCGAT 1 cut(s) 1619
BsiHKAI GWGCWC 3 cut(s) 322, 484, 1581
BsiHKCI CYCGRG 1 cut(s) 268
BsiSI CCGG 1 cut(s) 1515
BslFI GGGAC 3 cut(s) 1090, 1439, 1556
BslI CCNNNNNNNGG 2 cut(s) 372, 1423
BsmAI GTCTC 3 cut(s) 1310, 1383, 1695
BsmBI CGTCTC 1 cut(s) 1695
BsmFI GGGAC 3 cut(s) 1090, 1439, 1556
BsnI GGCC 6 cut(s) 110, 389, 805, 884, 1204, 1513
Bso31I GGTCTC 1 cut(s) 1383
BsoBI CYCGRG 1 cut(s) 268
Bsp1286I GDGCHC 3 cut(s) 322, 484, 1581
Bsp68I TCGCGA 1 cut(s) 486
BspACI CCGC 3 cut(s) 460, 1423, 1498
BspANI GGCC 6 cut(s) 110, 389, 805, 884, 1204, 1513
BspCNI CTCAG 4 cut(s) 589, 910, 1302, 1776
BspDI ATCGAT 1 cut(s) 1619
BspFNI CGCG 3 cut(s) 460, 486, 513
BspHI TCATGA 1 cut(s) 1170
BspLI GGNNCC 6 cut(s) 826, 1071, 1415, 1427, 1572, 1993
BspPI GGATC 7 cut(s) 69, 387, 819, 832, 853, 1659, 1884
BspTNI GGTCTC 1 cut(s) 1383
BsrDI GCAATG 2 cut(s) 581, 1944
BsrI ACTGG 2 cut(s) 183, 1684
BssECI CCNNGG 4 cut(s) 111, 390, 1073, 1205
BssNI GRCGYC 2 cut(s) 814, 1684
BssT1I CCWWGG 2 cut(s) 390, 1205
Bst2UI CCWGG 5 cut(s) 565, 999, 1074, 1893, 1916
Bst4CI ACNGT 4 cut(s) 643, 702, 1144, 1395
Bst6I CTCTTC 1 cut(s) 1022
BstACI GRCGYC 2 cut(s) 814, 1684
BstAPI GCANNNNNTGC 1 cut(s) 782
BstBAI YACGTR 2 cut(s) 968, 1354
BstC8I GCNNGC 2 cut(s) 484, 673
BstDEI CTNAG 4 cut(s) 597, 918, 1310, 1784
BstDSI CCRYGG 1 cut(s) 111
BstF5I GGATG 9 cut(s) 187, 235, 289, 359, 513, 1193, 1492, 1554, 1963
BstFNI CGCG 3 cut(s) 460, 486, 513
BstHHI GCGC 1 cut(s) 513
BstMAI GTCTC 3 cut(s) 1310, 1383, 1695
BstMWI GCNNNNNNNGC 7 cut(s) 107, 488, 517, 668, 782, 1420, 1943
BstNI CCWGG 5 cut(s) 565, 999, 1074, 1893, 1916
BstNSI RCATGY 5 cut(s) 593, 656, 913, 1783, 1847
BstSCI CCNGG 6 cut(s) 563, 997, 1072, 1513, 1891, 1914
BstSFI CTRYAG 1 cut(s) 979
BstSLI GKGCMC 1 cut(s) 322
BstSNI TACGTA 1 cut(s) 1354
BstUI CGCG 3 cut(s) 460, 486, 513
BstV1I GCAGC 6 cut(s) 297, 680, 772, 1407, 1465, 1955
BstX2I RGATCY 4 cut(s) 824, 845, 1855, 1876
BstXI CCANNNNNNTGG 1 cut(s) 880
BstYI RGATCY 4 cut(s) 824, 845, 1855, 1876
Bsu15I ATCGAT 1 cut(s) 1619
BsuRI GGCC 6 cut(s) 110, 389, 805, 884, 1204, 1513
BsuTUI ATCGAT 1 cut(s) 1619
BtgI CCRYGG 1 cut(s) 111
BtsCI GGATG 9 cut(s) 187, 235, 289, 359, 513, 1193, 1492, 1554, 1963
BtsI GCAGTG 1 cut(s) 669
BtsIMutI CAGTG 4 cut(s) 176, 669, 787, 1647
BtuMI TCGCGA 1 cut(s) 486
Cac8I GCNNGC 2 cut(s) 484, 673
CciI TCATGA 1 cut(s) 1170
CfoI GCGC 1 cut(s) 513
Cfr13I GGNCC 7 cut(s) 944, 1334, 1426, 1512, 1570, 1908, 1992
ClaI ATCGAT 1 cut(s) 1619
CseI GACGC 2 cut(s) 822, 1626
Csp6I GTAC 3 cut(s) 142, 304, 937
CspCI CAANNNNNGTGG 2 cut(s) 684, 719
CviQI GTAC 3 cut(s) 142, 304, 937
DdeI CTNAG 4 cut(s) 597, 918, 1310, 1784
DraI TTTAAA 2 cut(s) 534, 1725
DriI GACNNNNNGTC 1 cut(s) 1683
EaeI YGGCCR 2 cut(s) 387, 882
Eam1104I CTCTTC 1 cut(s) 1022
Eam1105I GACNNNNNGTC 1 cut(s) 1683
EarI CTCTTC 1 cut(s) 1022
Ecl136II GAGCTC 1 cut(s) 482
Eco105I TACGTA 1 cut(s) 1354
Eco130I CCWWGG 2 cut(s) 390, 1205
Eco147I AGGCCT 1 cut(s) 805
Eco24I GRGCYC 1 cut(s) 484
Eco31I GGTCTC 1 cut(s) 1383
Eco32I GATATC 1 cut(s) 1608
Eco47I GGWCC 6 cut(s) 944, 1334, 1426, 1570, 1908, 1992
Eco53kI GAGCTC 1 cut(s) 482
Eco57I CTGAAG 2 cut(s) 707, 1494
Eco88I CYCGRG 1 cut(s) 268
EcoICRI GAGCTC 1 cut(s) 482
EcoO109I RGGNCCY 2 cut(s) 1426, 1908
EcoRI GAATTC 1 cut(s) 949
EcoRII CCWGG 5 cut(s) 563, 997, 1072, 1891, 1914
EcoRV GATATC 1 cut(s) 1608
EcoT14I CCWWGG 2 cut(s) 390, 1205
EcoT22I ATGCAT 1 cut(s) 1273
EcoT38I GRGCYC 1 cut(s) 484
ErhI CCWWGG 2 cut(s) 390, 1205
Esp3I CGTCTC 1 cut(s) 1695
FaqI GGGAC 3 cut(s) 1090, 1439, 1556
FauI CCCGC 1 cut(s) 1416
FbaI TGATCA 3 cut(s) 1164, 1192, 1831
Fnu4HI GCNGC 7 cut(s) 311, 461, 669, 786, 1421, 1479, 1944
FokI GGATG 9 cut(s) 194, 242, 296, 346, 520, 1200, 1499, 1561, 1970
FriOI GRGCYC 1 cut(s) 484
Fsp4HI GCNGC 7 cut(s) 311, 461, 669, 786, 1421, 1479, 1944
FspBI CTAG 6 cut(s) 290, 929, 1016, 1121, 1410, 1812
GlaI GCGC 1 cut(s) 512
GluI GCNGC 7 cut(s) 311, 461, 669, 786, 1421, 1479, 1944
GsaI CCCAGC 1 cut(s) 1827
GsuI CTGGAG 3 cut(s) 95, 101, 1400
HaeIII GGCC 6 cut(s) 110, 389, 805, 884, 1204, 1513
HapII CCGG 1 cut(s) 1515
HgaI GACGC 2 cut(s) 822, 1626
HhaI GCGC 1 cut(s) 513
Hin1I GRCGYC 2 cut(s) 814, 1684
Hin6I GCGC 1 cut(s) 511
HinP1I GCGC 1 cut(s) 511
HincII GTYRAC 2 cut(s) 1063, 1147
HindII GTYRAC 2 cut(s) 1063, 1147
HindIII AAGCTT 2 cut(s) 453, 673
HinfI GANTC 4 cut(s) 129, 713, 734, 1773
HpaII CCGG 1 cut(s) 1515
HphI GGTGA 1 cut(s) 347
Hpy166II GTNNAC 5 cut(s) 320, 526, 939, 1063, 1147
Hpy188I TCNGA 9 cut(s) 479, 712, 726, 1311, 1474, 1612, 1667, 1749, 1797
Hpy188III TCNNGA 9 cut(s) 65, 270, 485, 929, 1171, 1346, 1447, 1853, 1874
Hpy8I GTNNAC 5 cut(s) 320, 526, 939, 1063, 1147
Hpy99I CGWCG 1 cut(s) 816
HpyAV CCTTC 8 cut(s) 269, 509, 838, 852, 1000, 1247, 1393, 1921
HpyCH4III ACNGT 4 cut(s) 643, 702, 1144, 1395
HpyCH4IV ACGT 6 cut(s) 397, 425, 967, 1353, 1684, 1704
HpyF10VI GCNNNNNNNGC 7 cut(s) 107, 488, 517, 668, 782, 1420, 1943
HpyF3I CTNAG 4 cut(s) 597, 918, 1310, 1784
HpySE526I ACGT 6 cut(s) 397, 425, 967, 1353, 1684, 1704
Hsp92I GRCGYC 2 cut(s) 814, 1684
HspAI GCGC 1 cut(s) 511
Ksp22I TGATCA 3 cut(s) 1164, 1192, 1831
LmnI GCTCC 5 cut(s) 76, 220, 694, 1075, 1419
Lsp1109I GCAGC 6 cut(s) 297, 680, 772, 1407, 1465, 1955
LweI GCATC 7 cut(s) 139, 322, 498, 676, 1258, 1464, 1908
MaeI CTAG 6 cut(s) 290, 929, 1016, 1121, 1410, 1812
MaeII ACGT 6 cut(s) 397, 425, 967, 1353, 1684, 1704
MaeIII GTNAC 2 cut(s) 592, 1837
MboII GAAGA 4 cut(s) 413, 826, 1039, 1706
MfeI CAATTG 1 cut(s) 1196
MflI RGATCY 4 cut(s) 824, 845, 1855, 1876
MhlI GDGCHC 3 cut(s) 322, 484, 1581
MlsI TGGCCA 2 cut(s) 389, 884
MluNI TGGCCA 2 cut(s) 389, 884
MmeI TCCRAC 2 cut(s) 408, 423
Mox20I TGGCCA 2 cut(s) 389, 884
Mph1103I ATGCAT 1 cut(s) 1273
MscI TGGCCA 2 cut(s) 389, 884
MslI CAYNNNNRTG 2 cut(s) 836, 1038
Msp20I TGGCCA 2 cut(s) 389, 884
MspA1I CMGCKG 1 cut(s) 1420
MspI CCGG 1 cut(s) 1515
MspR9I CCNGG 6 cut(s) 565, 999, 1074, 1515, 1893, 1916
MunI CAATTG 1 cut(s) 1196
MvaI CCWGG 5 cut(s) 565, 999, 1074, 1893, 1916
MvnI CGCG 3 cut(s) 460, 486, 513
MwoI GCNNNNNNNGC 7 cut(s) 107, 488, 517, 668, 782, 1420, 1943
NciI CCSGG 1 cut(s) 1515
NlaIV GGNNCC 6 cut(s) 826, 1071, 1415, 1427, 1572, 1993
NmuCI GTSAC 1 cut(s) 592
NruI TCGCGA 1 cut(s) 486
NsiI ATGCAT 1 cut(s) 1273
NspI RCATGY 5 cut(s) 593, 656, 913, 1783, 1847
PaeR7I CTCGAG 1 cut(s) 268
PagI TCATGA 1 cut(s) 1170
PceI AGGCCT 1 cut(s) 805
PciI ACATGT 2 cut(s) 589, 652
PfeI GAWTC 4 cut(s) 129, 713, 734, 1773
PfoI TCCNGGA 2 cut(s) 563, 1914
PkrI GCNGC 7 cut(s) 312, 462, 670, 787, 1422, 1480, 1945
Ppu21I YACGTR 2 cut(s) 968, 1354
PpuMI RGGWCCY 2 cut(s) 1426, 1908
PscI ACATGT 2 cut(s) 589, 652
Psp124BI GAGCTC 1 cut(s) 484
Psp5II RGGWCCY 2 cut(s) 1426, 1908
Psp6I CCWGG 5 cut(s) 563, 997, 1072, 1891, 1914
PspFI CCCAGC 1 cut(s) 1823
PspGI CCWGG 5 cut(s) 563, 997, 1072, 1891, 1914
PspN4I GGNNCC 6 cut(s) 826, 1071, 1415, 1427, 1572, 1993
PspPI GGNCC 7 cut(s) 944, 1334, 1426, 1512, 1570, 1908, 1992
PspPPI RGGWCCY 2 cut(s) 1426, 1908
PsuI RGATCY 4 cut(s) 824, 845, 1855, 1876
PvuII CAGCTG 1 cut(s) 1420
RruI TCGCGA 1 cut(s) 486
RsaI GTAC 3 cut(s) 143, 305, 938
RsaNI GTAC 3 cut(s) 142, 304, 937
RseI CAYNNNNRTG 2 cut(s) 836, 1038
SacI GAGCTC 1 cut(s) 484
SatI GCNGC 7 cut(s) 311, 461, 669, 786, 1421, 1479, 1944
Sau96I GGNCC 7 cut(s) 944, 1334, 1426, 1512, 1570, 1908, 1992
ScrFI CCNGG 6 cut(s) 565, 999, 1074, 1515, 1893, 1916
SduI GDGCHC 3 cut(s) 322, 484, 1581
SfaNI GCATC 7 cut(s) 139, 322, 498, 676, 1258, 1464, 1908
SfcI CTRYAG 1 cut(s) 979
Sfr274I CTCGAG 1 cut(s) 268
SinI GGWCC 6 cut(s) 944, 1334, 1426, 1570, 1908, 1992
SlaI CTCGAG 1 cut(s) 268
SmiI ATTTAAAT 1 cut(s) 534
SmiMI CAYNNNNRTG 2 cut(s) 836, 1038
SmlI CTYRAG 1 cut(s) 268
SmoI CTYRAG 1 cut(s) 268
SnaBI TACGTA 1 cut(s) 1354
SseBI AGGCCT 1 cut(s) 805
SsiI CCGC 3 cut(s) 460, 1423, 1498
SspI AATATT 1 cut(s) 1183
SspMI CTAG 6 cut(s) 290, 929, 1016, 1121, 1410, 1812
SstI GAGCTC 1 cut(s) 484
StuI AGGCCT 1 cut(s) 805
StyD4I CCNGG 6 cut(s) 563, 997, 1072, 1513, 1891, 1914
StyI CCWWGG 2 cut(s) 390, 1205
SwaI ATTTAAAT 1 cut(s) 534
TaaI ACNGT 4 cut(s) 643, 702, 1144, 1395
TaiI ACGT 6 cut(s) 400, 428, 970, 1356, 1687, 1707
TaqI TCGA 7 cut(s) 51, 127, 269, 794, 1522, 1619, 1632
TaqII GACCGA 1 cut(s) 961
TatI WGTACW 2 cut(s) 303, 936
TauI GCSGC 1 cut(s) 463
TfiI GAWTC 4 cut(s) 129, 713, 734, 1773
TscAI CASTG 4 cut(s) 183, 669, 787, 1647
TseFI GTSAC 1 cut(s) 592
TseI GCWGC 6 cut(s) 310, 668, 785, 1420, 1478, 1943
Tsp45I GTSAC 1 cut(s) 592
TspDTI ATGAA 6 cut(s) 300, 600, 670, 820, 826, 1242
TspGWI ACGGA 1 cut(s) 1664
TspRI CASTG 4 cut(s) 183, 669, 787, 1647
VneI GTGCAC 1 cut(s) 318
VpaK11BI GGWCC 6 cut(s) 944, 1334, 1426, 1570, 1908, 1992
XapI RAATTY 4 cut(s) 556, 866, 949, 1790
XbaI TCTAGA 1 cut(s) 928
XceI RCATGY 5 cut(s) 593, 656, 913, 1783, 1847
XhoI CTCGAG 1 cut(s) 268
XspI CTAG 6 cut(s) 290, 929, 1016, 1121, 1410, 1812
ZraI GACGTC 1 cut(s) 1685
Zsp2I ATGCAT 1 cut(s) 1273
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.