Rw5G002990

Chaperone protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0008846
Physical Location & Seq
Reverse (-)
2804375 .. 2808962
4588 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G002990.1

Sequence Viewer

Length: 2007 bp
ATGACAGGGATTGATGCAGAGCTATGCATGGAGGAGTTTGTGGCAAAAATCGAAGTGGAGGATCAGGAGAAGTTGGAGCTGGAGTATGGTGTTGAAATCGAAGCAGAGTCCGTGGTGGATGCGTGCCGAATCATTAAGCAGTACCCTGATGTTTTTCAGTTTAATTGTAGAGGAACACTGGATGATACCGAGAGGGCTATTTTGCAAATGAAGGTAGTAGAGCTTCTGGAGGAGGCTTGTTTAAGATTGAGGCATAAGTTTGACTACTCGAGAGAAGGAGAGGATGAACTAGAGGTGGGGGAGTACAGGTTGCATCGTGCACTTGTTGAGTTGAATGAAATTGAAAAAGAAAGAGAGCCATCCACCCAAAAATGGAGGGATCGTGTGGCCAAGGAACGTGAAGAACTAAACGATATGTGGAACAAGTTGGAGATAAAGTGGTTGGAATTACAAGCTTCACGGCAGAGATATGACATCAGAGCTCGGGAGGCACTTTTGTTGGAAAGGATGCGGGAAGGGCTGGTTTACTATTTAAATGAGGAAAGATCAAAGGAAAATTTCTCTGGGTTGTTGCAATGGCTTGATGAACATGTGACTGAGCTTTTATATACAACTCGCAAAGATTTTAAGCATGAGCTGACCGTTAGCTCGCATGCTATTGCACTGGCAGCAAGCTTGTTGATTGATGCTCCACCATCGCAGTTGCTTTCCGAATCACCAGTACTTCAGAACCATGAATCAATTAGGAGGGTAATTGGACAAGAACATGTTCTACTTGCAGTCAGTGCTGCTTTATCGAGGCAGAGGCCTCCACGACGCCCTATTGGATCCTTCATCTTCATGTGTGGATCCGGTTGTGGGAGGACAGAAATTGCCAAACTTTTGGCCACTCTAGTCTTTGGTAAAAAAGACATGCTAACCGAGTTTGATCTTGAAAAGTACACAGGACCAAATTCTTTATCACGCCTTCTTGGTGTTCTCTGTAGTAGCCACATTGAACCAGGCAAGAAGGGAGAGCTATGTGTTAAGAAGAGGCATCTAGGTGTCATTTTGTTTGACAATGTTGACAAGGCTCCTGCGCCTATTATTGAGCTTTTGACCCAGATTATAGGCTTTGGTTATCTAGTAGATGGTAATGGGAATAGTGTTGACTTCACTAATACGTTGATCATCGTGACGACAAATATTGGATGTGATCAATTGTGGCCGTGGAATTGCAAATGTGCTGATGAAGTTCACAAGTTTCCTGTCAAAGAAGGATTATTTGATGATGCATGGGAAAGAAATCATAATTCCTGTTACCTATCACTTCTGAGGGAGACAAAAAATCATTTTGGACCTCAATTTCTTGAATATGTAGATGATGTGATTGGATTTAGGTCTCTTTCCTCTCAACAATTGAAGGCTGTTGCTAGGCTCCAGCTAAGGGACCTTGCCGTGTACATGACCCAGAAGGGCCTCATCATTTACTCCTCTGAAGCTGCATTGGATATTATTGTGCGGAGATCAGCTTGGCCTGGAGATCGAATTAAAGGTGGAGAGAAAATAAGGATGTGGCTGGAACAGAACTTGGTCCCTGTGCTCTTCGAGATGATTTCAAAGAATGAGATATCTGATTTATCTATCATGTATATTGAAGCGTCAGTGGAGTCAGATCAATTGTCTTTCAGAATGGAAAAGACGGGACGTCTATTAGAAGAACGAGACGTTAATCAGTTAGCCTCTTTAAAGGAATTGAGATTAATGTACCAGAAAGAGAAAGAAAGAGCAAAGCGAATCTACATGCTGAGAAAATTTCAGAACAAATTGATGGCTAGTGCAAATGCTGGATTTGATCATGTGACGAATGTTGTTCAAGATCTGGTCAATATAATTCAGGATCTCATTACAATTCCCGGTAGCATCGTCAGGTCCTTCCTGGATAATCCTAAAAAGGTGGCAATGGCGGCCTTGAATGAGGATGAGGTTAGGCAGAACAAGAGGGCAAAAAAAGGGGCCAAGGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04213 map04213
Pfam Domains
Protein Families
AAA_2

Protein Analysis

668

Amino Acids

76.73

Weight (kDa)

5.69

Isoelectric Point (pI)

46.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_2 PF07724 273 - 451 1.4e-21 AAA domain (Cdc48 subfamily)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1690
AciI CCGC 3 cut(s) 511, 1501, 1946
AclWI GGATC 7 cut(s) 69, 387, 822, 835, 843, 856, 1887
AcoI YGGCCR 3 cut(s) 387, 885, 1205
AcsI RAATTY 3 cut(s) 556, 952, 1793
AcuI CTGAAG 2 cut(s) 710, 1497
AcyI GRCGYC 2 cut(s) 817, 1687
AfaI GTAC 6 cut(s) 143, 305, 723, 941, 1442, 1748
AfiI CCNNNNNNNGG 3 cut(s) 372, 858, 1426
AflIII ACRYGT 2 cut(s) 589, 766
AhdI GACNNNNNGTC 1 cut(s) 1686
AjnI CCWGG 3 cut(s) 1000, 1516, 1917
Alw21I GWGCWC 3 cut(s) 322, 484, 1584
Alw26I GTCTC 3 cut(s) 1313, 1386, 1698
Alw44I GTGCAC 1 cut(s) 318
AlwI GGATC 7 cut(s) 69, 387, 822, 835, 843, 856, 1887
Ama87I CYCGRG 2 cut(s) 268, 483
AoxI GGCC 8 cut(s) 387, 806, 885, 1205, 1456, 1514, 1947, 1995
ApaLI GTGCAC 1 cut(s) 318
ApeKI GCWGC 3 cut(s) 668, 788, 1481
ApoI RAATTY 3 cut(s) 556, 952, 1793
AseI ATTAAT 1 cut(s) 1742
Asp700I GAANNNNTTC 1 cut(s) 768
AspLEI GCGC 1 cut(s) 1081
AspS9I GGNCC 7 cut(s) 947, 1337, 1429, 1456, 1573, 1911, 1995
AsuC2I CCSGG 1 cut(s) 1896
AsuHPI GGTGA 1 cut(s) 708
AvaI CYCGRG 2 cut(s) 268, 483
AvaII GGWCC 5 cut(s) 947, 1337, 1429, 1573, 1911
BaeGI GKGCMC 1 cut(s) 322
BalI TGGCCA 2 cut(s) 389, 887
BamHI GGATCC 2 cut(s) 827, 848
BanII GRGCYC 1 cut(s) 484
BarI GAAGNNNNNNTAC 2 cut(s) 207, 239
Bbv12I GWGCWC 3 cut(s) 322, 484, 1584
BbvI GCAGC 3 cut(s) 680, 775, 1468
BccI CCATC 4 cut(s) 367, 703, 1124, 1804
BceAI ACGGC 3 cut(s) 476, 1192, 1421
BciT130I CCWGG 3 cut(s) 1002, 1518, 1919
BclI TGATCA 3 cut(s) 1167, 1195, 1834
BcnI CCSGG 1 cut(s) 1896
BcoDI GTCTC 3 cut(s) 1313, 1386, 1698
BfaI CTAG 6 cut(s) 290, 893, 1040, 1124, 1413, 1815
BfmI CTRYAG 1 cut(s) 982
BglII AGATCT 1 cut(s) 1858
BisI GCNGC 4 cut(s) 669, 789, 1482, 1947
BlsI GCNGC 4 cut(s) 670, 790, 1483, 1948
BmcAI AGTACT 1 cut(s) 723
Bme1390I CCNGG 4 cut(s) 1002, 1518, 1896, 1919
Bme18I GGWCC 5 cut(s) 947, 1337, 1429, 1573, 1911
BmeRI GACNNNNNGTC 1 cut(s) 1686
BmeT110I CYCGRG 2 cut(s) 268, 483
BmgT120I GGNCC 7 cut(s) 947, 1337, 1429, 1456, 1573, 1911, 1995
BmiI GGNNCC 7 cut(s) 829, 850, 1074, 1418, 1430, 1575, 1996
BmrFI CCNGG 4 cut(s) 1002, 1518, 1896, 1919
BmsI GCATC 8 cut(s) 4, 109, 322, 498, 676, 1045, 1261, 1911
BpmI CTGGAG 4 cut(s) 101, 248, 1403, 1539
Bpu10I CCTNAGC 1 cut(s) 1424
BpuMI CCSGG 1 cut(s) 1896
BsaHI GRCGYC 2 cut(s) 817, 1687
BsaI GGTCTC 1 cut(s) 1386
BsaJI CCNNGG 4 cut(s) 111, 390, 1208, 1998
BsaWI WCCGGW 1 cut(s) 851
BsaXI ACNNNNNCTCC 8 cut(s) 68, 98, 293, 323, 367, 397, 422, 452
Bsc4I CCNNNNNNNGG 3 cut(s) 372, 858, 1426
Bse1I ACTGG 3 cut(s) 183, 669, 719
Bse3DI GCAATG 2 cut(s) 581, 1947
BseBI CCWGG 3 cut(s) 1002, 1518, 1919
BseDI CCNNGG 4 cut(s) 111, 390, 1208, 1998
BseGI GGATG 8 cut(s) 124, 187, 289, 359, 513, 1196, 1557, 1966
BseLI CCNNNNNNNGG 3 cut(s) 372, 858, 1426
BseMI GCAATG 2 cut(s) 581, 1947
BseMII CTCAG 3 cut(s) 588, 1304, 1778
BseNI ACTGG 3 cut(s) 183, 669, 719
BseRI GAGGAG 3 cut(s) 47, 245, 1462
BseSI GKGCMC 1 cut(s) 322
BseXI GCAGC 3 cut(s) 680, 775, 1468
BshFI GGCC 8 cut(s) 389, 808, 887, 1207, 1458, 1516, 1949, 1997
BsiHKAI GWGCWC 3 cut(s) 322, 484, 1584
BsiHKCI CYCGRG 2 cut(s) 268, 483
BsiSI CCGG 2 cut(s) 852, 1896
BslFI GGGAC 3 cut(s) 1442, 1559, 1698
BslI CCNNNNNNNGG 3 cut(s) 372, 858, 1426
BsmAI GTCTC 3 cut(s) 1313, 1386, 1698
BsmBI CGTCTC 1 cut(s) 1698
BsmFI GGGAC 3 cut(s) 1442, 1559, 1698
BsnI GGCC 8 cut(s) 389, 808, 887, 1207, 1458, 1516, 1949, 1997
Bso31I GGTCTC 1 cut(s) 1386
BsoBI CYCGRG 2 cut(s) 268, 483
Bsp1286I GDGCHC 3 cut(s) 322, 484, 1584
Bsp1407I TGTACA 1 cut(s) 1440
BspACI CCGC 3 cut(s) 511, 1501, 1946
BspANI GGCC 8 cut(s) 389, 808, 887, 1207, 1458, 1516, 1949, 1997
BspCNI CTCAG 3 cut(s) 589, 1305, 1779
BspLI GGNNCC 7 cut(s) 829, 850, 1074, 1418, 1430, 1575, 1996
BspPI GGATC 7 cut(s) 69, 387, 822, 835, 843, 856, 1887
BspQI GCTCTTC 1 cut(s) 1589
BspTNI GGTCTC 1 cut(s) 1386
BsrDI GCAATG 2 cut(s) 581, 1947
BsrGI TGTACA 1 cut(s) 1440
BsrI ACTGG 3 cut(s) 183, 669, 719
BssECI CCNNGG 4 cut(s) 111, 390, 1208, 1998
BssNI GRCGYC 2 cut(s) 817, 1687
BssT1I CCWWGG 2 cut(s) 390, 1998
Bst2UI CCWGG 3 cut(s) 1002, 1518, 1919
Bst4CI ACNGT 1 cut(s) 643
Bst6I CTCTTC 2 cut(s) 1025, 1589
BstACI GRCGYC 2 cut(s) 817, 1687
BstAPI GCANNNNNTGC 1 cut(s) 785
BstAUI TGTACA 1 cut(s) 1440
BstC8I GCNNGC 4 cut(s) 124, 650, 654, 673
BstDEI CTNAG 4 cut(s) 597, 1313, 1424, 1787
BstDSI CCRYGG 2 cut(s) 111, 1208
BstF5I GGATG 8 cut(s) 124, 187, 289, 359, 513, 1196, 1557, 1966
BstHHI GCGC 1 cut(s) 1081
BstMAI GTCTC 3 cut(s) 1313, 1386, 1698
BstMWI GCNNNNNNNGC 5 cut(s) 488, 517, 668, 785, 1946
BstNI CCWGG 3 cut(s) 1002, 1518, 1919
BstNSI RCATGY 5 cut(s) 593, 656, 770, 916, 1786
BstSCI CCNGG 4 cut(s) 1000, 1516, 1894, 1917
BstSFI CTRYAG 1 cut(s) 982
BstSLI GKGCMC 1 cut(s) 322
BstV1I GCAGC 3 cut(s) 680, 775, 1468
BstX2I RGATCY 4 cut(s) 827, 848, 1858, 1879
BstXI CCANNNNNNTGG 1 cut(s) 883
BstYI RGATCY 4 cut(s) 827, 848, 1858, 1879
BsuRI GGCC 8 cut(s) 389, 808, 887, 1207, 1458, 1516, 1949, 1997
BtgI CCRYGG 2 cut(s) 111, 1208
BtgZI GCGATG 1 cut(s) 681
BtsCI GGATG 8 cut(s) 124, 187, 289, 359, 513, 1196, 1557, 1966
BtsIMutI CAGTG 4 cut(s) 176, 662, 790, 1650
Cac8I GCNNGC 4 cut(s) 124, 650, 654, 673
CfoI GCGC 1 cut(s) 1081
Cfr13I GGNCC 7 cut(s) 947, 1337, 1429, 1456, 1573, 1911, 1995
CseI GACGC 2 cut(s) 825, 1629
Csp6I GTAC 6 cut(s) 142, 304, 722, 940, 1441, 1747
CviQI GTAC 6 cut(s) 142, 304, 722, 940, 1441, 1747
DdeI CTNAG 4 cut(s) 597, 1313, 1424, 1787
DraI TTTAAA 2 cut(s) 534, 1728
DriI GACNNNNNGTC 1 cut(s) 1686
EaeI YGGCCR 3 cut(s) 387, 885, 1205
Eam1104I CTCTTC 2 cut(s) 1025, 1589
Eam1105I GACNNNNNGTC 1 cut(s) 1686
EarI CTCTTC 2 cut(s) 1025, 1589
Ecl136II GAGCTC 1 cut(s) 482
Eco130I CCWWGG 2 cut(s) 390, 1998
Eco147I AGGCCT 1 cut(s) 808
Eco24I GRGCYC 1 cut(s) 484
Eco31I GGTCTC 1 cut(s) 1386
Eco32I GATATC 1 cut(s) 1611
Eco47I GGWCC 5 cut(s) 947, 1337, 1429, 1573, 1911
Eco53kI GAGCTC 1 cut(s) 482
Eco57I CTGAAG 2 cut(s) 710, 1497
Eco88I CYCGRG 2 cut(s) 268, 483
EcoICRI GAGCTC 1 cut(s) 482
EcoO109I RGGNCCY 3 cut(s) 1429, 1456, 1911
EcoRII CCWGG 3 cut(s) 1000, 1516, 1917
EcoRV GATATC 1 cut(s) 1611
EcoT14I CCWWGG 2 cut(s) 390, 1998
EcoT22I ATGCAT 2 cut(s) 29, 1276
EcoT38I GRGCYC 1 cut(s) 484
ErhI CCWWGG 2 cut(s) 390, 1998
Esp3I CGTCTC 1 cut(s) 1698
FaqI GGGAC 3 cut(s) 1442, 1559, 1698
FauI CCCGC 1 cut(s) 504
FbaI TGATCA 3 cut(s) 1167, 1195, 1834
Fnu4HI GCNGC 4 cut(s) 669, 789, 1482, 1947
FokI GGATG 8 cut(s) 131, 194, 296, 346, 520, 1203, 1564, 1973
FriOI GRGCYC 1 cut(s) 484
Fsp4HI GCNGC 4 cut(s) 669, 789, 1482, 1947
FspBI CTAG 6 cut(s) 290, 893, 1040, 1124, 1413, 1815
GlaI GCGC 1 cut(s) 1080
GluI GCNGC 4 cut(s) 669, 789, 1482, 1947
GsuI CTGGAG 4 cut(s) 101, 248, 1403, 1539
HaeIII GGCC 8 cut(s) 389, 808, 887, 1207, 1458, 1516, 1949, 1997
HapII CCGG 2 cut(s) 852, 1896
HgaI GACGC 2 cut(s) 825, 1629
HhaI GCGC 1 cut(s) 1081
Hin1I GRCGYC 2 cut(s) 817, 1687
Hin6I GCGC 1 cut(s) 1079
HinP1I GCGC 1 cut(s) 1079
HincII GTYRAC 2 cut(s) 1066, 1150
HindII GTYRAC 2 cut(s) 1066, 1150
HindIII AAGCTT 2 cut(s) 453, 673
HinfI GANTC 6 cut(s) 107, 129, 713, 737, 1649, 1776
HpaII CCGG 2 cut(s) 852, 1896
HphI GGTGA 1 cut(s) 708
Hpy166II GTNNAC 7 cut(s) 320, 526, 942, 1066, 1150, 1237, 1441
Hpy188I TCNGA 9 cut(s) 479, 712, 729, 1314, 1477, 1615, 1654, 1670, 1800
Hpy8I GTNNAC 7 cut(s) 320, 526, 942, 1066, 1150, 1237, 1441
Hpy99I CGWCG 1 cut(s) 819
HpyCH4III ACNGT 1 cut(s) 643
HpyCH4IV ACGT 4 cut(s) 397, 1163, 1687, 1707
HpyF10VI GCNNNNNNNGC 5 cut(s) 488, 517, 668, 785, 1946
HpyF3I CTNAG 4 cut(s) 597, 1313, 1424, 1787
HpySE526I ACGT 4 cut(s) 397, 1163, 1687, 1707
Hsp92I GRCGYC 2 cut(s) 817, 1687
HspAI GCGC 1 cut(s) 1079
Ksp22I TGATCA 3 cut(s) 1167, 1195, 1834
LguI GCTCTTC 1 cut(s) 1589
LmnI GCTCC 4 cut(s) 76, 694, 1078, 1422
Lsp1109I GCAGC 3 cut(s) 680, 775, 1468
LweI GCATC 8 cut(s) 4, 109, 322, 498, 676, 1045, 1261, 1911
MaeI CTAG 6 cut(s) 290, 893, 1040, 1124, 1413, 1815
MaeII ACGT 4 cut(s) 397, 1163, 1687, 1707
MaeIII GTNAC 4 cut(s) 592, 1174, 1298, 1840
MboII GAAGA 5 cut(s) 413, 829, 1042, 1576, 1709
MfeI CAATTG 3 cut(s) 1199, 1397, 1658
MflI RGATCY 4 cut(s) 827, 848, 1858, 1879
MhlI GDGCHC 3 cut(s) 322, 484, 1584
MlsI TGGCCA 2 cut(s) 389, 887
MluNI TGGCCA 2 cut(s) 389, 887
MlyI GAGTC 2 cut(s) 116, 1658
MmeI TCCRAC 4 cut(s) 54, 408, 423, 480
Mox20I TGGCCA 2 cut(s) 389, 887
Mph1103I ATGCAT 2 cut(s) 29, 1276
MroXI GAANNNNTTC 1 cut(s) 768
MscI TGGCCA 2 cut(s) 389, 887
MslI CAYNNNNRTG 2 cut(s) 839, 1041
Msp20I TGGCCA 2 cut(s) 389, 887
MspI CCGG 2 cut(s) 852, 1896
MspR9I CCNGG 4 cut(s) 1002, 1518, 1896, 1919
MunI CAATTG 3 cut(s) 1199, 1397, 1658
MvaI CCWGG 3 cut(s) 1002, 1518, 1919
MwoI GCNNNNNNNGC 5 cut(s) 488, 517, 668, 785, 1946
NciI CCSGG 1 cut(s) 1896
NlaIV GGNNCC 7 cut(s) 829, 850, 1074, 1418, 1430, 1575, 1996
NmuCI GTSAC 3 cut(s) 592, 1174, 1840
NsiI ATGCAT 2 cut(s) 29, 1276
NspI RCATGY 5 cut(s) 593, 656, 770, 916, 1786
PaeI GCATGC 1 cut(s) 656
PaeR7I CTCGAG 1 cut(s) 268
PceI AGGCCT 1 cut(s) 808
PciI ACATGT 2 cut(s) 589, 766
PciSI GCTCTTC 1 cut(s) 1589
PdmI GAANNNNTTC 1 cut(s) 768
PfeI GAWTC 4 cut(s) 129, 713, 737, 1776
PfoI TCCNGGA 1 cut(s) 1917
PkrI GCNGC 4 cut(s) 670, 790, 1483, 1948
PleI GAGTC 2 cut(s) 115, 1657
PpsI GAGTC 2 cut(s) 115, 1657
PpuMI RGGWCCY 2 cut(s) 1429, 1911
PscI ACATGT 2 cut(s) 589, 766
PshBI ATTAAT 1 cut(s) 1742
Psp124BI GAGCTC 1 cut(s) 484
Psp5II RGGWCCY 2 cut(s) 1429, 1911
Psp6I CCWGG 3 cut(s) 1000, 1516, 1917
PspGI CCWGG 3 cut(s) 1000, 1516, 1917
PspN4I GGNNCC 7 cut(s) 829, 850, 1074, 1418, 1430, 1575, 1996
PspPI GGNCC 7 cut(s) 947, 1337, 1429, 1456, 1573, 1911, 1995
PspPPI RGGWCCY 2 cut(s) 1429, 1911
PsrI GAACNNNNNNTAC 2 cut(s) 756, 788
PsuI RGATCY 4 cut(s) 827, 848, 1858, 1879
RsaI GTAC 6 cut(s) 143, 305, 723, 941, 1442, 1748
RsaNI GTAC 6 cut(s) 142, 304, 722, 940, 1441, 1747
RseI CAYNNNNRTG 2 cut(s) 839, 1041
SacI GAGCTC 1 cut(s) 484
SapI GCTCTTC 1 cut(s) 1589
SatI GCNGC 4 cut(s) 669, 789, 1482, 1947
Sau96I GGNCC 7 cut(s) 947, 1337, 1429, 1456, 1573, 1911, 1995
ScaI AGTACT 1 cut(s) 723
SchI GAGTC 2 cut(s) 116, 1658
ScrFI CCNGG 4 cut(s) 1002, 1518, 1896, 1919
SduI GDGCHC 3 cut(s) 322, 484, 1584
SfaNI GCATC 8 cut(s) 4, 109, 322, 498, 676, 1045, 1261, 1911
SfcI CTRYAG 1 cut(s) 982
Sfr274I CTCGAG 1 cut(s) 268
SinI GGWCC 5 cut(s) 947, 1337, 1429, 1573, 1911
SlaI CTCGAG 1 cut(s) 268
SmiI ATTTAAAT 1 cut(s) 534
SmiMI CAYNNNNRTG 2 cut(s) 839, 1041
SmlI CTYRAG 1 cut(s) 268
SmoI CTYRAG 1 cut(s) 268
SphI GCATGC 1 cut(s) 656
SseBI AGGCCT 1 cut(s) 808
SsiI CCGC 3 cut(s) 511, 1501, 1946
SspI AATATT 1 cut(s) 1186
SspMI CTAG 6 cut(s) 290, 893, 1040, 1124, 1413, 1815
SstI GAGCTC 1 cut(s) 484
StuI AGGCCT 1 cut(s) 808
StyD4I CCNGG 4 cut(s) 1000, 1516, 1894, 1917
StyI CCWWGG 2 cut(s) 390, 1998
SwaI ATTTAAAT 1 cut(s) 534
TaaI ACNGT 1 cut(s) 643
TaiI ACGT 4 cut(s) 400, 1166, 1690, 1710
TaqI TCGA 6 cut(s) 51, 99, 269, 797, 1525, 1587
TatI WGTACW 4 cut(s) 303, 721, 939, 1440
TauI GCSGC 1 cut(s) 1949
TfiI GAWTC 4 cut(s) 129, 713, 737, 1776
TscAI CASTG 4 cut(s) 183, 669, 790, 1650
TseFI GTSAC 3 cut(s) 592, 1174, 1840
TseI GCWGC 3 cut(s) 668, 788, 1481
Tsp45I GTSAC 3 cut(s) 592, 1174, 1840
TspDTI ATGAA 8 cut(s) 224, 300, 351, 600, 750, 823, 829, 1245
TspGWI ACGGA 1 cut(s) 100
TspRI CASTG 4 cut(s) 183, 669, 790, 1650
VneI GTGCAC 1 cut(s) 318
VpaK11BI GGWCC 5 cut(s) 947, 1337, 1429, 1573, 1911
VspI ATTAAT 1 cut(s) 1742
XapI RAATTY 3 cut(s) 556, 952, 1793
XceI RCATGY 5 cut(s) 593, 656, 770, 916, 1786
XhoI CTCGAG 1 cut(s) 268
XmnI GAANNNNTTC 1 cut(s) 768
XspI CTAG 6 cut(s) 290, 893, 1040, 1124, 1413, 1815
ZraI GACGTC 1 cut(s) 1688
ZrmI AGTACT 1 cut(s) 723
Zsp2I ATGCAT 2 cut(s) 29, 1276
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.