Rh5CG034800

Chaperone protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0008846
Physical Location & Seq
Reverse (-)
2221017 .. 2225968
4952 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG034800.1

Sequence Viewer

Length: 1974 bp
ATGACAGGGATTGATGCAGAGCTATGCATGGAGGAGTTTGTGGCAAAAATCGAAGTGGAGGATCAGGAGAAGTTGGAGCTGGAGTATGGTGTTGAAATCGAAGCAGAGTCCGTGGTGGATGCGTGCCGCATCATTAAGCAGTACCCTGATGTTTTTCAGTTTAATTGTAGAGGAACACTGGATGATACCGAGAGGGCTATTTTGCAAATGAAGGTAGTAGAGCTTCTAGAGGAGGCTTGTTTAAGATTGAGGCATAAGTTTGACTACTCGAGAGAAGGAGAGGATGAACTAGAGGTGGGGGAGTACAGGTTGCATCGTGCACTTGTTGAGTTGAATGAAATTGAAAAAGAAAGGGAGCCATCCACCCAAAAATGGAGGGATCGTGTGGCCAAGGAACGTGAAGAACTAAACGATATGTGGAACAGGTTGGAGATAAAGTGGTTGGAATTACAAGCTTCACGGCAGAGATATGACATCAGAGCTCGGGAGGCACTTTTGTTGGAAAGGATGCGGGAAGGGCTGGTTTACTATTTAAATGAGGAAAGATCGAAGGAAAATTTCTCTGGGTTGTTGCAATGGCTTGATGAACATGTGACTGAGCTTTTATATACAACTCGCAAAGATTTTAAGCATGAGCTGACCGTTAGCTCGCATGCTATTGCACTGGCAGCAAGCTTGTTGATTGATGCTCCACCATCGCAGTTGCTTTCCGAATCACCAGTACTTCAGAACCATGAATCAATTAGGAGGGTAATTGGACAAGAACATGTTCTACTTGCAGTCAGTGCTGCTTTATCGAGGCAGAGGCCTCCACGACGCCCTATTGGATCCTTCATCTTCATGTGTGGATCCGGTTGTGGGAGGACAGAAATTGCCAAACTTTTGGCCACTCTAGTCTTTGGTAAAAAAGACATGCTAACCGAGTTTGATCTTGAAAAGTACACAGGACCAAATTCTTTATCACGCCTTCTTGGTGTTCTCTGTAGTAGCCACATTGAACCAGGCAAGAAGGGAGAGCTATGTGTTAAGAAGAGGCATCTAGGTGTCATTTTGTTTGACAATGTTGACAAGGCTCCTGCGCCTATTATTGAGCTTTTGACCCAGATTATAGGCTTTGGTTATATAGTAGATGGTAATGGGAATAGTGTTGACTTCACTAATACGTTGATCATCATGACGACAAATATTGGATGTGATCAATTGTGGCCGTGGAATTGCAAATGTGCTGATGAAGTTCAAAAGTTTCCTGTCAAAGAAGGATTATTTGATGATGCATGGGAAAGAAATCATAATTCCTGTTACCTATCACTTCTGAGGGAGACAAAAAATCATTTTGGACCTCAATTTCTTGAATATGTAGATGATGTGATTGGATTTAGGTCTCTTTCCTCTCAACAATTGAAGGCTGTTGCTAGGCTCCAGCTAAGGGACCTTGCCGTGTACATGACCCAGAAGGGCCTCATCATTTACTCCTCTGAAGCTGCATTGGATATTATTGTGCGGAGATCAGCTTGGCCTGGAGATCGAATTAAAGGTGGAGAGAAAATAAGGATGTGGCTGGAACAGAACTTGGTCCCTGTGCTCTTCGAGATGATTTCAAAGAATGAGATATCTGATTTATCTATCATGTATATTGAAGCGTCAGTGGAGTCAGATCAATTGTCTTTCAGAATGGAAAAGACGGGACGTCTATTAGAAGAACGAGACGTTAATCAGTTAGCCTCTTTAAAGGAATTGAGATTAATGTACCAGAAAGAGAAAGAAAGAGCAAAGCGAATCTACATGCTGAGAAAATTTCAGAACAAATTGATGGCTAGTGCAAATGCTGGATTTGATCATGTGACGAATGTTGTTCAAGATCTGGTCAATATAATTCAGGATCTCATTACAATTCCCGGTAGCATCGTCAGGTCCTTCCTGGATAATCCTAAAAAGGTATACAATTTTGTTTTCACTTACATTTGCTTTTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04213 map04213
Pfam Domains
Protein Families
AAA_2

Protein Analysis

657

Amino Acids

75.86

Weight (kDa)

5.48

Isoelectric Point (pI)

44.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_2 PF07724 273 - 451 3e-22 AAA domain (Cdc48 subfamily)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1690
AccI GTMKAC 1 cut(s) 1938
AciI CCGC 3 cut(s) 127, 511, 1501
AclWI GGATC 7 cut(s) 69, 387, 822, 835, 843, 856, 1887
AcoI YGGCCR 3 cut(s) 387, 885, 1205
AcsI RAATTY 3 cut(s) 556, 952, 1793
AcuI CTGAAG 2 cut(s) 710, 1497
AcyI GRCGYC 2 cut(s) 817, 1687
AfaI GTAC 6 cut(s) 143, 305, 723, 941, 1442, 1748
AfiI CCNNNNNNNGG 3 cut(s) 372, 858, 1426
AflIII ACRYGT 2 cut(s) 589, 766
AhdI GACNNNNNGTC 1 cut(s) 1686
AjnI CCWGG 3 cut(s) 1000, 1516, 1917
Alw21I GWGCWC 3 cut(s) 322, 484, 1584
Alw26I GTCTC 3 cut(s) 1313, 1386, 1698
Alw44I GTGCAC 1 cut(s) 318
AlwI GGATC 7 cut(s) 69, 387, 822, 835, 843, 856, 1887
Ama87I CYCGRG 2 cut(s) 268, 483
AoxI GGCC 6 cut(s) 387, 806, 885, 1205, 1456, 1514
ApaLI GTGCAC 1 cut(s) 318
ApeKI GCWGC 3 cut(s) 668, 788, 1481
ApoI RAATTY 3 cut(s) 556, 952, 1793
AseI ATTAAT 1 cut(s) 1742
Asp700I GAANNNNTTC 1 cut(s) 768
AspLEI GCGC 1 cut(s) 1081
AspS9I GGNCC 6 cut(s) 947, 1337, 1429, 1456, 1573, 1911
AsuC2I CCSGG 1 cut(s) 1896
AsuHPI GGTGA 1 cut(s) 708
AvaI CYCGRG 2 cut(s) 268, 483
AvaII GGWCC 5 cut(s) 947, 1337, 1429, 1573, 1911
BaeGI GKGCMC 1 cut(s) 322
BalI TGGCCA 2 cut(s) 389, 887
BamHI GGATCC 2 cut(s) 827, 848
BanII GRGCYC 1 cut(s) 484
BarI GAAGNNNNNNTAC 2 cut(s) 207, 239
Bbv12I GWGCWC 3 cut(s) 322, 484, 1584
BbvI GCAGC 3 cut(s) 680, 775, 1468
BccI CCATC 4 cut(s) 367, 703, 1124, 1804
BceAI ACGGC 3 cut(s) 476, 1192, 1421
BciT130I CCWGG 3 cut(s) 1002, 1518, 1919
BclI TGATCA 3 cut(s) 1167, 1195, 1834
BcnI CCSGG 1 cut(s) 1896
BcoDI GTCTC 3 cut(s) 1313, 1386, 1698
BfaI CTAG 6 cut(s) 227, 290, 893, 1040, 1413, 1815
BfmI CTRYAG 1 cut(s) 982
BglII AGATCT 1 cut(s) 1858
BisI GCNGC 4 cut(s) 127, 669, 789, 1482
BlsI GCNGC 4 cut(s) 128, 670, 790, 1483
BmcAI AGTACT 1 cut(s) 723
Bme1390I CCNGG 4 cut(s) 1002, 1518, 1896, 1919
Bme18I GGWCC 5 cut(s) 947, 1337, 1429, 1573, 1911
BmeRI GACNNNNNGTC 1 cut(s) 1686
BmeT110I CYCGRG 2 cut(s) 268, 483
BmgT120I GGNCC 6 cut(s) 947, 1337, 1429, 1456, 1573, 1911
BmiI GGNNCC 7 cut(s) 357, 829, 850, 1074, 1418, 1430, 1575
BmrFI CCNGG 4 cut(s) 1002, 1518, 1896, 1919
BmsI GCATC 9 cut(s) 4, 109, 138, 322, 498, 676, 1045, 1261, 1911
BpmI CTGGAG 3 cut(s) 101, 1403, 1539
Bpu10I CCTNAGC 1 cut(s) 1424
BpuMI CCSGG 1 cut(s) 1896
BsaHI GRCGYC 2 cut(s) 817, 1687
BsaI GGTCTC 1 cut(s) 1386
BsaJI CCNNGG 3 cut(s) 111, 390, 1208
BsaWI WCCGGW 1 cut(s) 851
BsaXI ACNNNNNCTCC 8 cut(s) 68, 98, 293, 323, 367, 397, 422, 452
Bsc4I CCNNNNNNNGG 3 cut(s) 372, 858, 1426
Bse1I ACTGG 3 cut(s) 183, 669, 719
Bse3DI GCAATG 1 cut(s) 581
BseBI CCWGG 3 cut(s) 1002, 1518, 1919
BseDI CCNNGG 3 cut(s) 111, 390, 1208
BseGI GGATG 7 cut(s) 124, 187, 289, 359, 513, 1196, 1557
BseLI CCNNNNNNNGG 3 cut(s) 372, 858, 1426
BseMI GCAATG 1 cut(s) 581
BseMII CTCAG 3 cut(s) 588, 1304, 1778
BseNI ACTGG 3 cut(s) 183, 669, 719
BseRI GAGGAG 3 cut(s) 47, 245, 1462
BseSI GKGCMC 1 cut(s) 322
BseXI GCAGC 3 cut(s) 680, 775, 1468
BshFI GGCC 6 cut(s) 389, 808, 887, 1207, 1458, 1516
BsiHKAI GWGCWC 3 cut(s) 322, 484, 1584
BsiHKCI CYCGRG 2 cut(s) 268, 483
BsiSI CCGG 2 cut(s) 852, 1896
BslFI GGGAC 3 cut(s) 1442, 1559, 1698
BslI CCNNNNNNNGG 3 cut(s) 372, 858, 1426
BsmAI GTCTC 3 cut(s) 1313, 1386, 1698
BsmBI CGTCTC 1 cut(s) 1698
BsmFI GGGAC 3 cut(s) 1442, 1559, 1698
BsnI GGCC 6 cut(s) 389, 808, 887, 1207, 1458, 1516
Bso31I GGTCTC 1 cut(s) 1386
BsoBI CYCGRG 2 cut(s) 268, 483
Bsp1286I GDGCHC 3 cut(s) 322, 484, 1584
Bsp1407I TGTACA 1 cut(s) 1440
BspACI CCGC 3 cut(s) 127, 511, 1501
BspANI GGCC 6 cut(s) 389, 808, 887, 1207, 1458, 1516
BspCNI CTCAG 3 cut(s) 589, 1305, 1779
BspHI TCATGA 1 cut(s) 1173
BspLI GGNNCC 7 cut(s) 357, 829, 850, 1074, 1418, 1430, 1575
BspPI GGATC 7 cut(s) 69, 387, 822, 835, 843, 856, 1887
BspQI GCTCTTC 1 cut(s) 1589
BspTNI GGTCTC 1 cut(s) 1386
BsrDI GCAATG 1 cut(s) 581
BsrGI TGTACA 1 cut(s) 1440
BsrI ACTGG 3 cut(s) 183, 669, 719
BssECI CCNNGG 3 cut(s) 111, 390, 1208
BssNAI GTATAC 1 cut(s) 1939
BssNI GRCGYC 2 cut(s) 817, 1687
BssT1I CCWWGG 1 cut(s) 390
Bst1107I GTATAC 1 cut(s) 1939
Bst2UI CCWGG 3 cut(s) 1002, 1518, 1919
Bst4CI ACNGT 1 cut(s) 643
Bst6I CTCTTC 2 cut(s) 1025, 1589
BstACI GRCGYC 2 cut(s) 817, 1687
BstAPI GCANNNNNTGC 1 cut(s) 785
BstAUI TGTACA 1 cut(s) 1440
BstC8I GCNNGC 4 cut(s) 124, 650, 654, 673
BstDEI CTNAG 4 cut(s) 597, 1313, 1424, 1787
BstDSI CCRYGG 2 cut(s) 111, 1208
BstF5I GGATG 7 cut(s) 124, 187, 289, 359, 513, 1196, 1557
BstHHI GCGC 1 cut(s) 1081
BstMAI GTCTC 3 cut(s) 1313, 1386, 1698
BstMWI GCNNNNNNNGC 4 cut(s) 488, 517, 668, 785
BstNI CCWGG 3 cut(s) 1002, 1518, 1919
BstNSI RCATGY 5 cut(s) 593, 656, 770, 916, 1786
BstSCI CCNGG 4 cut(s) 1000, 1516, 1894, 1917
BstSFI CTRYAG 1 cut(s) 982
BstSLI GKGCMC 1 cut(s) 322
BstV1I GCAGC 3 cut(s) 680, 775, 1468
BstX2I RGATCY 4 cut(s) 827, 848, 1858, 1879
BstXI CCANNNNNNTGG 1 cut(s) 883
BstYI RGATCY 4 cut(s) 827, 848, 1858, 1879
BstZ17I GTATAC 1 cut(s) 1939
BsuRI GGCC 6 cut(s) 389, 808, 887, 1207, 1458, 1516
BtgI CCRYGG 2 cut(s) 111, 1208
BtgZI GCGATG 1 cut(s) 681
BtsCI GGATG 7 cut(s) 124, 187, 289, 359, 513, 1196, 1557
BtsIMutI CAGTG 4 cut(s) 176, 662, 790, 1650
Cac8I GCNNGC 4 cut(s) 124, 650, 654, 673
CciI TCATGA 1 cut(s) 1173
CfoI GCGC 1 cut(s) 1081
Cfr13I GGNCC 6 cut(s) 947, 1337, 1429, 1456, 1573, 1911
CseI GACGC 2 cut(s) 825, 1629
Csp6I GTAC 6 cut(s) 142, 304, 722, 940, 1441, 1747
CviQI GTAC 6 cut(s) 142, 304, 722, 940, 1441, 1747
DdeI CTNAG 4 cut(s) 597, 1313, 1424, 1787
DraI TTTAAA 2 cut(s) 534, 1728
DriI GACNNNNNGTC 1 cut(s) 1686
EaeI YGGCCR 3 cut(s) 387, 885, 1205
Eam1104I CTCTTC 2 cut(s) 1025, 1589
Eam1105I GACNNNNNGTC 1 cut(s) 1686
EarI CTCTTC 2 cut(s) 1025, 1589
Ecl136II GAGCTC 1 cut(s) 482
Eco130I CCWWGG 1 cut(s) 390
Eco147I AGGCCT 1 cut(s) 808
Eco24I GRGCYC 1 cut(s) 484
Eco31I GGTCTC 1 cut(s) 1386
Eco32I GATATC 1 cut(s) 1611
Eco47I GGWCC 5 cut(s) 947, 1337, 1429, 1573, 1911
Eco53kI GAGCTC 1 cut(s) 482
Eco57I CTGAAG 2 cut(s) 710, 1497
Eco88I CYCGRG 2 cut(s) 268, 483
EcoICRI GAGCTC 1 cut(s) 482
EcoO109I RGGNCCY 3 cut(s) 1429, 1456, 1911
EcoRII CCWGG 3 cut(s) 1000, 1516, 1917
EcoRV GATATC 1 cut(s) 1611
EcoT14I CCWWGG 1 cut(s) 390
EcoT22I ATGCAT 2 cut(s) 29, 1276
EcoT38I GRGCYC 1 cut(s) 484
ErhI CCWWGG 1 cut(s) 390
Esp3I CGTCTC 1 cut(s) 1698
FaqI GGGAC 3 cut(s) 1442, 1559, 1698
FauI CCCGC 1 cut(s) 504
FbaI TGATCA 3 cut(s) 1167, 1195, 1834
FblI GTMKAC 1 cut(s) 1938
Fnu4HI GCNGC 4 cut(s) 127, 669, 789, 1482
FokI GGATG 7 cut(s) 131, 194, 296, 346, 520, 1203, 1564
FriOI GRGCYC 1 cut(s) 484
Fsp4HI GCNGC 4 cut(s) 127, 669, 789, 1482
FspBI CTAG 6 cut(s) 227, 290, 893, 1040, 1413, 1815
GlaI GCGC 1 cut(s) 1080
GluI GCNGC 4 cut(s) 127, 669, 789, 1482
GsuI CTGGAG 3 cut(s) 101, 1403, 1539
HaeIII GGCC 6 cut(s) 389, 808, 887, 1207, 1458, 1516
HapII CCGG 2 cut(s) 852, 1896
HgaI GACGC 2 cut(s) 825, 1629
HhaI GCGC 1 cut(s) 1081
Hin1I GRCGYC 2 cut(s) 817, 1687
Hin6I GCGC 1 cut(s) 1079
HinP1I GCGC 1 cut(s) 1079
HincII GTYRAC 2 cut(s) 1066, 1150
HindII GTYRAC 2 cut(s) 1066, 1150
HindIII AAGCTT 2 cut(s) 453, 673
HinfI GANTC 5 cut(s) 107, 713, 737, 1649, 1776
HpaII CCGG 2 cut(s) 852, 1896
HphI GGTGA 1 cut(s) 708
Hpy166II GTNNAC 7 cut(s) 320, 526, 942, 1066, 1150, 1441, 1939
Hpy8I GTNNAC 7 cut(s) 320, 526, 942, 1066, 1150, 1441, 1939
Hpy99I CGWCG 1 cut(s) 819
HpyCH4III ACNGT 1 cut(s) 643
HpyCH4IV ACGT 4 cut(s) 397, 1163, 1687, 1707
HpyF10VI GCNNNNNNNGC 4 cut(s) 488, 517, 668, 785
HpyF3I CTNAG 4 cut(s) 597, 1313, 1424, 1787
HpySE526I ACGT 4 cut(s) 397, 1163, 1687, 1707
Hsp92I GRCGYC 2 cut(s) 817, 1687
HspAI GCGC 1 cut(s) 1079
Ksp22I TGATCA 3 cut(s) 1167, 1195, 1834
LguI GCTCTTC 1 cut(s) 1589
LmnI GCTCC 5 cut(s) 76, 355, 694, 1078, 1422
Lsp1109I GCAGC 3 cut(s) 680, 775, 1468
LweI GCATC 9 cut(s) 4, 109, 138, 322, 498, 676, 1045, 1261, 1911
MaeI CTAG 6 cut(s) 227, 290, 893, 1040, 1413, 1815
MaeII ACGT 4 cut(s) 397, 1163, 1687, 1707
MaeIII GTNAC 3 cut(s) 592, 1298, 1840
MboII GAAGA 5 cut(s) 413, 829, 1042, 1576, 1709
MfeI CAATTG 3 cut(s) 1199, 1397, 1658
MflI RGATCY 4 cut(s) 827, 848, 1858, 1879
MhlI GDGCHC 3 cut(s) 322, 484, 1584
MlsI TGGCCA 2 cut(s) 389, 887
MluNI TGGCCA 2 cut(s) 389, 887
MlyI GAGTC 2 cut(s) 116, 1658
MmeI TCCRAC 4 cut(s) 54, 408, 423, 480
Mox20I TGGCCA 2 cut(s) 389, 887
Mph1103I ATGCAT 2 cut(s) 29, 1276
MroXI GAANNNNTTC 1 cut(s) 768
MscI TGGCCA 2 cut(s) 389, 887
MslI CAYNNNNRTG 2 cut(s) 839, 1041
Msp20I TGGCCA 2 cut(s) 389, 887
MspI CCGG 2 cut(s) 852, 1896
MspR9I CCNGG 4 cut(s) 1002, 1518, 1896, 1919
MunI CAATTG 3 cut(s) 1199, 1397, 1658
MvaI CCWGG 3 cut(s) 1002, 1518, 1919
MwoI GCNNNNNNNGC 4 cut(s) 488, 517, 668, 785
NciI CCSGG 1 cut(s) 1896
NlaIV GGNNCC 7 cut(s) 357, 829, 850, 1074, 1418, 1430, 1575
NmuCI GTSAC 2 cut(s) 592, 1840
NsiI ATGCAT 2 cut(s) 29, 1276
NspI RCATGY 5 cut(s) 593, 656, 770, 916, 1786
PaeI GCATGC 1 cut(s) 656
PaeR7I CTCGAG 1 cut(s) 268
PagI TCATGA 1 cut(s) 1173
PceI AGGCCT 1 cut(s) 808
PciI ACATGT 2 cut(s) 589, 766
PciSI GCTCTTC 1 cut(s) 1589
PdmI GAANNNNTTC 1 cut(s) 768
PfeI GAWTC 3 cut(s) 713, 737, 1776
PfoI TCCNGGA 1 cut(s) 1917
PkrI GCNGC 4 cut(s) 128, 670, 790, 1483
PleI GAGTC 2 cut(s) 115, 1657
PpsI GAGTC 2 cut(s) 115, 1657
PpuMI RGGWCCY 2 cut(s) 1429, 1911
PscI ACATGT 2 cut(s) 589, 766
PshBI ATTAAT 1 cut(s) 1742
Psp124BI GAGCTC 1 cut(s) 484
Psp5II RGGWCCY 2 cut(s) 1429, 1911
Psp6I CCWGG 3 cut(s) 1000, 1516, 1917
PspGI CCWGG 3 cut(s) 1000, 1516, 1917
PspN4I GGNNCC 7 cut(s) 357, 829, 850, 1074, 1418, 1430, 1575
PspPI GGNCC 6 cut(s) 947, 1337, 1429, 1456, 1573, 1911
PspPPI RGGWCCY 2 cut(s) 1429, 1911
PsrI GAACNNNNNNTAC 2 cut(s) 756, 788
PsuI RGATCY 4 cut(s) 827, 848, 1858, 1879
RsaI GTAC 6 cut(s) 143, 305, 723, 941, 1442, 1748
RsaNI GTAC 6 cut(s) 142, 304, 722, 940, 1441, 1747
RseI CAYNNNNRTG 2 cut(s) 839, 1041
SacI GAGCTC 1 cut(s) 484
SapI GCTCTTC 1 cut(s) 1589
SatI GCNGC 4 cut(s) 127, 669, 789, 1482
Sau96I GGNCC 6 cut(s) 947, 1337, 1429, 1456, 1573, 1911
ScaI AGTACT 1 cut(s) 723
SchI GAGTC 2 cut(s) 116, 1658
ScrFI CCNGG 4 cut(s) 1002, 1518, 1896, 1919
SduI GDGCHC 3 cut(s) 322, 484, 1584
SfaNI GCATC 9 cut(s) 4, 109, 138, 322, 498, 676, 1045, 1261, 1911
SfcI CTRYAG 1 cut(s) 982
Sfr274I CTCGAG 1 cut(s) 268
SinI GGWCC 5 cut(s) 947, 1337, 1429, 1573, 1911
SlaI CTCGAG 1 cut(s) 268
SmiI ATTTAAAT 1 cut(s) 534
SmiMI CAYNNNNRTG 2 cut(s) 839, 1041
SmlI CTYRAG 1 cut(s) 268
SmoI CTYRAG 1 cut(s) 268
SphI GCATGC 1 cut(s) 656
SseBI AGGCCT 1 cut(s) 808
SsiI CCGC 3 cut(s) 127, 511, 1501
SspI AATATT 1 cut(s) 1186
SspMI CTAG 6 cut(s) 227, 290, 893, 1040, 1413, 1815
SstI GAGCTC 1 cut(s) 484
StuI AGGCCT 1 cut(s) 808
StyD4I CCNGG 4 cut(s) 1000, 1516, 1894, 1917
StyI CCWWGG 1 cut(s) 390
SwaI ATTTAAAT 1 cut(s) 534
TaaI ACNGT 1 cut(s) 643
TaiI ACGT 4 cut(s) 400, 1166, 1690, 1710
TaqI TCGA 7 cut(s) 51, 99, 269, 548, 797, 1525, 1587
TatI WGTACW 4 cut(s) 303, 721, 939, 1440
TauI GCSGC 1 cut(s) 129
TfiI GAWTC 3 cut(s) 713, 737, 1776
TscAI CASTG 4 cut(s) 183, 669, 790, 1650
TseFI GTSAC 2 cut(s) 592, 1840
TseI GCWGC 3 cut(s) 668, 788, 1481
Tsp45I GTSAC 2 cut(s) 592, 1840
TspDTI ATGAA 8 cut(s) 224, 300, 351, 600, 750, 823, 829, 1245
TspGWI ACGGA 1 cut(s) 100
TspRI CASTG 4 cut(s) 183, 669, 790, 1650
VneI GTGCAC 1 cut(s) 318
VpaK11BI GGWCC 5 cut(s) 947, 1337, 1429, 1573, 1911
VspI ATTAAT 1 cut(s) 1742
XapI RAATTY 3 cut(s) 556, 952, 1793
XbaI TCTAGA 1 cut(s) 226
XceI RCATGY 5 cut(s) 593, 656, 770, 916, 1786
XhoI CTCGAG 1 cut(s) 268
XmiI GTMKAC 1 cut(s) 1938
XmnI GAANNNNTTC 1 cut(s) 768
XspI CTAG 6 cut(s) 227, 290, 893, 1040, 1413, 1815
ZraI GACGTC 1 cut(s) 1688
ZrmI AGTACT 1 cut(s) 723
Zsp2I ATGCAT 2 cut(s) 29, 1276
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.