Rorug04G0405400

Chaperone protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0008846
Physical Location & Seq
Reverse (-)
56957396 .. 56971886
14491 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0405400.1

Sequence Viewer

Length: 2703 bp
ATGTCGACGGTGAGCATTGAGCCTCTTCTCCACCACCACTGTCGCCGGGGAAACTCGCGGCACCGTTCAACGCCGAAGCTCATCAACCTCAGCTCCTCCCTGAGTGCCTTTCCGAAAAAGGTGGAGTTTCGTGGCCGGAGCTTCTGCAACTTCCGGCATCCCACTGCTCTCACTCTCAGAGCTTCTTCTACTGACACCGCCGTAGCTGCGACCACCGCGCCTTTCTTCAAGGAAACATTTCCTCTTGAGCGAACTGAACTGGTGGAGGGAAAGATCTCTGTGAGATTAGATCACGGGAAGAATGCTCGGAATTGGATTCTTACTGTTGGTTGTACTCTTCCCGGAAAGTGGATTCTGCACTGGGGAGTTTCACAGGTTGATGACGTCGGCAGTGAATGGGATCAACCTCCTGATGAAATGAGGCCACCTGGTTCAATTCCAATTAAGGACTATGCAATAGAAACACCCTTGAACAAATCAGCATCATCTGTTGGAGATGATACCTCTCAGGAAGTGAAGATTGATTTTCATCTTGACGGTGCAATTGCAGCCATAAATTTTGTTCTAAAGGATGAAGAAACTGGCACTTGGTATCAGTACAAAGGAAGAGATTTCAAAGTGCCTCTTGTGGGCTACCTGCAAGAATATGGCAATGTTGTTGGAGCAAAAAAGGGAGTGGGGATATTGCCAGGAGCTTTGGGGAAGTTATCCAACTTATTTTTCAAGGCAGAATCATCAAACTCCCAAGATAAAAATAGCAGTAGTGAATCCAGAGGAACTAAAGAGGAAACTAGGTCTCTAGAAGGGTTCTACGAAGAACTCCCTATCGCAAAACAAATTGCTGTAGTGAATTCAGTAACTGTTTCTGTCAGGAAGTGCCCTGAGACAGCTAAGAATCTTCTATATTTGGAAACGGATTTACCTGATCATGTTGTTGTTCATTGGGGAGTTTGCAAAGATGATGCTAAAAGATGGGAAATTCCAGCAGCCCCACATCCGCCAGAAACAGTAGTGTTCAAGGATAAGGCTTTGCGAACTCGACTGCAGCAAAAAGAGGGAGCAAATGGACGTTGGGCATTGTTTACTTTAGATGAAGGAACCGCAGGATTTCTTTTTGTTTTCAAGCTAAGTGAAAGTACATGGTTGAAATGTAAGGGCAATGACTTCTACATCCCCCTTTCAAGCGCAAATAATTCACCTGCTGCAGCAAAAGAGGATCAATCTGAAGGTGCTAATGTCGATGAGAGAAGTGCAGAAGAAATAGATGAAAGTTCTTTTACTGAATATACCAATGGAATAATAAATGAAATAAGGACCTTGGTGAGTGGCATTTCCTCTGAGAAGAGTCGAAAGACAAAATCCAAAGAAGCACAAGAAAGCATTCTTCAAGAAATAGAAAAATTGGCTGCTGAAGCCTATAGTATCTTCAGAAGCACTGTTCCCACATTTACTGAGGAAGCTATTTCAGAAACTGAAGAATTACCCCCCTCTGTGAAAATAACCTCAGGGACAGGCACGGGGTTTGAAATATTGTGCCAAGGTTTTAATTGGGAATCTCATAAATCTGGAAGATGGTACATGGAGCTCAAAGATAAAGCTGCTGAACTATCTTCACTAGGTTTCACTGTGATTTGGTTACCACCCCCTACAGATTCTGTGTCACCTGAAGGGTACATGCCGACAGATTTGTATAATCTGAACTCCAGATATGGCACTATGGATGAACTGAAGGAGACTGTGAAGGCATTCCATAAAGTTGGTATCAAAGTACTTGGAGATGTTGTTCTAAATCACCGCTGTGCGCAGTATAAGAATAGCAATGGTGTATGGAATATATTTGGTGGTCGTTTAAATTGGGATGATCGTGCAGTTGTTGCAGATGATCCGCATTTTCAGGGTAGGGGCAACAAAAGTAGTGGAGATAGTTTTCATGCTGCACCAAACATTGATCATTCACAAGAGTTTGTGAGGAAGGATATCAAAGAATGGTTATGCTGGCTAAGGCAAGAAATTGGGTATGATGGATGGAGGCTTGATTTTGTTAGAGGATTTTGGGGTGGTTATGTTAAGGACTACATGGATGATAGTGAGCCATACTTTGCTGTTGGTGAGTTTTGGGATTCCCTAAGTTATACATATGGTGAGATGGATCACAATCAAGATGGACATCGGCAGAGAATTATTGATTGGATTAATGCTACTAGTGGAGCCGCTGGTGCTTTTGATGTAACAACAAAAGGCATCCTTCATGCTGCGTTGGAAAGATGTGAGTATTGGCGATTATCGGATCAGAAGGGAAAACCTCCTGGGGTTGTTGGATGGTGGCCATCTCGTGCTGTTACCTTCATAGAGAATCACGATACTGGTTCTACTCAGGGTCACTGGAGGTTTCCACATGACAAGGAAATTCAAGGATATGCATATACTCTGACTCATCCAGGAACACCTGCAGTCTTCTATGACCACATCTTCTCACACTACAAATCTGAAATTGCAGGTCTAATCTCTCTGAGAAACCGGAACACAATCAACTGTCGGAGCAGAGTTAAAATTACCAAAGCTGAAAGAGATGTGTATGCCGCTATCATTGATGAAAAAGTAGCAATGAAGATCGGACCAGGTCACTATGAACCCCCAAATGGGCTTAAAAAATGGTCCAAAAGCCTTGAGGGAAGAGACTACAAGGTCTGGGAAGCATCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04213 map04213
Pfam Domains
Protein Families
AAA_2

Protein Analysis

900

Amino Acids

101.08

Weight (kDa)

6.07

Isoelectric Point (pI)

42.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ig_N_CWD1 PF23166 87 - 209 2.6e-30 Alpha-glucan water dikinase 1 Ig-like N-terminal domain
Ig_N_CWD1 PF23166 276 - 393 2.9e-34 Alpha-glucan water dikinase 1 Ig-like N-terminal domain
Alpha-amylase PF00128 536 - 603 2.8e-13 Alpha amylase, catalytic domain
Alpha-amyl_C2 PF07821 840 - 898 1.9e-20 Alpha-amylase C-terminal beta-sheet domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1207, 2455
AasI GACNNNNNNGTC 1 cut(s) 2684
AatII GACGTC 1 cut(s) 387
Acc16I TGCGCA 1 cut(s) 1803
Acc36I ACCTGC 4 cut(s) 645, 1207, 2455, 2486
AccB1I GGYRCC 1 cut(s) 60
AccI GTMKAC 1 cut(s) 5
AccII CGCG 2 cut(s) 58, 218
AciI CCGC 9 cut(s) 58, 198, 216, 998, 1101, 1795, 1886, 2211, 2580
AclWI GGATC 5 cut(s) 408, 1224, 1877, 2157, 2295
AcoI YGGCCR 2 cut(s) 133, 2324
AcsI RAATTY 4 cut(s) 556, 850, 978, 2406
AcuI CTGAAG 6 cut(s) 1245, 1411, 1431, 1494, 1686, 1748
AcyI GRCGYC 1 cut(s) 384
AfaI GTAC 6 cut(s) 334, 599, 1138, 1577, 1673, 1770
AfiI CCNNNNNNNGG 4 cut(s) 348, 629, 2639, 2640
AhlI ACTAGT 1 cut(s) 2201
AjnI CCWGG 5 cut(s) 427, 688, 2305, 2437, 2617
AjuI GAANNNNNNNTTGG 4 cut(s) 704, 736, 2170, 2202
AleI CACNNNNGTG 1 cut(s) 1797
AloI GAACNNNNNNTCC 2 cut(s) 1767, 1799
Alw21I GWGCWC 1 cut(s) 1587
Alw26I GTCTC 4 cut(s) 801, 878, 1727, 2670
AlwI GGATC 5 cut(s) 408, 1224, 1877, 2157, 2295
AlwNI CAGNNNCTG 3 cut(s) 860, 1472, 1655
AoxI GGCC 3 cut(s) 133, 422, 2324
ApoI RAATTY 4 cut(s) 556, 850, 978, 2406
AseI ATTAAT 1 cut(s) 2193
Asp700I GAANNNNTTC 3 cut(s) 237, 1380, 1745
AspLEI GCGC 3 cut(s) 220, 1187, 1804
AspS9I GGNCC 3 cut(s) 1314, 2615, 2655
AsuC2I CCSGG 2 cut(s) 47, 342
AsuHPI GGTGA 7 cut(s) 22, 1188, 1333, 1653, 1784, 2120, 2153
AvaII GGWCC 3 cut(s) 1314, 2615, 2655
AxyI CCTNAGG 1 cut(s) 1504
BaeGI GKGCMC 1 cut(s) 881
BalI TGGCCA 1 cut(s) 2326
BanI GGYRCC 1 cut(s) 60
BanII GRGCYC 1 cut(s) 1587
BauI CACGAG 1 cut(s) 2331
BbsI GAAGAC 1 cut(s) 2446
Bbv12I GWGCWC 1 cut(s) 1587
BbvCI CCTCAGC 1 cut(s) 89
BccI CCATC 8 cut(s) 966, 1566, 2015, 2019, 2140, 2156, 2313, 2335
BceAI ACGGC 1 cut(s) 185
BciT130I CCWGG 5 cut(s) 429, 690, 2307, 2439, 2619
BclI TGATCA 2 cut(s) 925, 1948
BcnI CCSGG 2 cut(s) 47, 342
BcoDI GTCTC 4 cut(s) 801, 878, 1727, 2670
BcuI ACTAGT 1 cut(s) 2201
BfaI CTAG 4 cut(s) 792, 800, 1616, 2202
BfmI CTRYAG 6 cut(s) 843, 1043, 1203, 1417, 1647, 2448
BfuAI ACCTGC 4 cut(s) 645, 1207, 2455, 2486
BglII AGATCT 1 cut(s) 273
BmcAI AGTACT 1 cut(s) 1770
Bme1390I CCNGG 7 cut(s) 47, 342, 429, 690, 2307, 2439, 2619
Bme18I GGWCC 3 cut(s) 1314, 2615, 2655
BmgT120I GGNCC 3 cut(s) 1314, 2615, 2655
BmiI GGNNCC 3 cut(s) 62, 1099, 2209
BmrFI CCNGG 7 cut(s) 47, 342, 429, 690, 2307, 2439, 2619
BmrI ACTGGG 1 cut(s) 370
BmsI GCATC 4 cut(s) 166, 491, 952, 2250
BmuI ACTGGG 1 cut(s) 370
BpiI GAAGAC 1 cut(s) 2446
BpmI CTGGAG 2 cut(s) 1687, 2404
Bpu10I CCTNAGC 2 cut(s) 89, 2000
BpuEI CTTGAG 2 cut(s) 266, 2687
BpuMI CCSGG 2 cut(s) 47, 342
BsaBI GATNNNNATC 3 cut(s) 528, 2154, 2166
BsaHI GRCGYC 1 cut(s) 384
BsaI GGTCTC 1 cut(s) 801
BsaJI CCNNGG 4 cut(s) 46, 1317, 1537, 2306
BsaWI WCCGGW 1 cut(s) 2517
BsaXI ACNNNNNCTCC 4 cut(s) 77, 107, 1767, 1797
Bsc4I CCNNNNNNNGG 4 cut(s) 348, 629, 2639, 2640
Bse1I ACTGG 5 cut(s) 264, 365, 586, 2368, 2387
Bse21I CCTNAGG 1 cut(s) 1504
Bse3DI GCAATG 4 cut(s) 658, 1165, 1825, 2610
Bse8I GATNNNNATC 3 cut(s) 528, 2154, 2166
BseBI CCWGG 5 cut(s) 429, 690, 2307, 2439, 2619
BseDI CCNNGG 4 cut(s) 46, 1317, 1537, 2306
BseJI GATNNNNATC 3 cut(s) 528, 2154, 2166
BseLI CCNNNNNNNGG 4 cut(s) 348, 629, 2639, 2640
BseMI GCAATG 4 cut(s) 658, 1165, 1825, 2610
BseNI ACTGG 5 cut(s) 264, 365, 586, 2368, 2387
BseRI GAGGAG 1 cut(s) 85
BseSI GKGCMC 1 cut(s) 881
BsgI GTGCAG 4 cut(s) 341, 1272, 1887, 1920
Bsh1236I CGCG 2 cut(s) 58, 218
BshFI GGCC 3 cut(s) 135, 424, 2326
BshNI GGYRCC 1 cut(s) 60
BsiHKAI GWGCWC 1 cut(s) 1587
BsiSI CCGG 5 cut(s) 46, 136, 154, 342, 2518
BslFI GGGAC 1 cut(s) 1522
BslI CCNNNNNNNGG 4 cut(s) 348, 629, 2639, 2640
BsmAI GTCTC 4 cut(s) 801, 878, 1727, 2670
BsmFI GGGAC 1 cut(s) 1522
BsmI GAATGC 3 cut(s) 307, 1380, 1745
BsnI GGCC 3 cut(s) 135, 424, 2326
Bso31I GGTCTC 1 cut(s) 801
Bsp1286I GDGCHC 2 cut(s) 881, 1587
BspACI CCGC 9 cut(s) 58, 198, 216, 998, 1101, 1795, 1886, 2211, 2580
BspANI GGCC 3 cut(s) 135, 424, 2326
BspFNI CGCG 2 cut(s) 58, 218
BspLI GGNNCC 3 cut(s) 62, 1099, 2209
BspMAI CTGCAG 3 cut(s) 1047, 1207, 2452
BspMI ACCTGC 4 cut(s) 645, 1207, 2455, 2486
BspPI GGATC 5 cut(s) 408, 1224, 1877, 2157, 2295
BspT107I GGYRCC 1 cut(s) 60
BspTNI GGTCTC 1 cut(s) 801
BsrDI GCAATG 4 cut(s) 658, 1165, 1825, 2610
BsrI ACTGG 5 cut(s) 264, 365, 586, 2368, 2387
BssECI CCNNGG 4 cut(s) 46, 1317, 1537, 2306
BssNI GRCGYC 1 cut(s) 384
BssSI CACGAG 1 cut(s) 2331
BssT1I CCWWGG 2 cut(s) 1317, 1537
Bst2BI CACGAG 1 cut(s) 2331
Bst2UI CCWGG 5 cut(s) 429, 690, 2307, 2439, 2619
Bst6I CTCTTC 5 cut(s) 30, 342, 601, 1337, 2668
BstACI GRCGYC 1 cut(s) 384
BstAPI GCANNNNNTGC 1 cut(s) 1874
BstC8I GCNNGC 1 cut(s) 1997
BstEII GGTNACC 1 cut(s) 1635
BstFNI CGCG 2 cut(s) 58, 218
BstHHI GCGC 3 cut(s) 220, 1187, 1804
BstMAI GTCTC 4 cut(s) 801, 878, 1727, 2670
BstMWI GCNNNNNNNGC 6 cut(s) 206, 215, 548, 1412, 1874, 2216
BstNI CCWGG 5 cut(s) 429, 690, 2307, 2439, 2619
BstNSI RCATGY 1 cut(s) 1678
BstPI GGTNACC 1 cut(s) 1635
BstSCI CCNGG 7 cut(s) 45, 340, 427, 688, 2305, 2437, 2617
BstSFI CTRYAG 6 cut(s) 843, 1043, 1203, 1417, 1647, 2448
BstSLI GKGCMC 1 cut(s) 881
BstUI CGCG 2 cut(s) 58, 218
BstV2I GAAGAC 1 cut(s) 2446
BstX2I RGATCY 1 cut(s) 273
BstXI CCANNNNNNTGG 1 cut(s) 1757
BstYI RGATCY 1 cut(s) 273
Bsu36I CCTNAGG 1 cut(s) 1504
BsuRI GGCC 3 cut(s) 135, 424, 2326
BtsI GCAGTG 2 cut(s) 162, 397
BtsIMutI CAGTG 7 cut(s) 37, 162, 358, 397, 1434, 1623, 2380
BveI ACCTGC 4 cut(s) 645, 1207, 2455, 2486
Cac8I GCNNGC 1 cut(s) 1997
CaiI CAGNNNCTG 3 cut(s) 860, 1472, 1655
CfoI GCGC 3 cut(s) 220, 1187, 1804
Cfr13I GGNCC 3 cut(s) 1314, 2615, 2655
CsiI ACCWGGT 2 cut(s) 427, 2617
Csp6I GTAC 6 cut(s) 333, 598, 1137, 1576, 1672, 1769
CspCI CAANNNNNGTGG 2 cut(s) 1897, 1932
CviAII CATG 8 cut(s) 929, 1140, 1579, 1675, 1931, 2077, 2249, 2396
CviQI GTAC 6 cut(s) 333, 598, 1137, 1576, 1672, 1769
DraI TTTAAA 1 cut(s) 1851
DrdI GACNNNNNNGTC 1 cut(s) 2684
DseDI GACNNNNNNGTC 1 cut(s) 2684
EaeI YGGCCR 2 cut(s) 133, 2324
Eam1104I CTCTTC 5 cut(s) 30, 342, 601, 1337, 2668
EarI CTCTTC 5 cut(s) 30, 342, 601, 1337, 2668
EciI GGCGGA 1 cut(s) 987
Ecl136II GAGCTC 1 cut(s) 1585
Eco130I CCWWGG 2 cut(s) 1317, 1537
Eco24I GRGCYC 1 cut(s) 1587
Eco31I GGTCTC 1 cut(s) 801
Eco32I GATATC 1 cut(s) 1978
Eco47I GGWCC 3 cut(s) 1314, 2615, 2655
Eco53kI GAGCTC 1 cut(s) 1585
Eco57I CTGAAG 6 cut(s) 1245, 1411, 1431, 1494, 1686, 1748
Eco81I CCTNAGG 1 cut(s) 1504
Eco91I GGTNACC 1 cut(s) 1635
EcoICRI GAGCTC 1 cut(s) 1585
EcoO109I RGGNCCY 1 cut(s) 1314
EcoO65I GGTNACC 1 cut(s) 1635
EcoRI GAATTC 1 cut(s) 850
EcoRII CCWGG 5 cut(s) 427, 688, 2305, 2437, 2617
EcoRV GATATC 1 cut(s) 1978
EcoT14I CCWWGG 2 cut(s) 1317, 1537
EcoT22I ATGCAT 1 cut(s) 2422
EcoT38I GRGCYC 1 cut(s) 1587
ErhI CCWWGG 2 cut(s) 1317, 1537
FaeI CATG 8 cut(s) 932, 1143, 1582, 1678, 1934, 2080, 2252, 2399
FalI AAGNNNNNCTT 4 cut(s) 609, 641, 2229, 2261
FaqI GGGAC 1 cut(s) 1522
FatI CATG 8 cut(s) 928, 1139, 1578, 1674, 1930, 2076, 2248, 2395
FauNDI CATATG 1 cut(s) 2137
FbaI TGATCA 2 cut(s) 925, 1948
FblI GTMKAC 1 cut(s) 5
FriOI GRGCYC 1 cut(s) 1587
FspBI CTAG 4 cut(s) 792, 800, 1616, 2202
FspI TGCGCA 1 cut(s) 1803
GlaI GCGC 3 cut(s) 219, 1186, 1803
GsuI CTGGAG 2 cut(s) 1687, 2404
HaeIII GGCC 3 cut(s) 135, 424, 2326
HapII CCGG 5 cut(s) 46, 136, 154, 342, 2518
HhaI GCGC 3 cut(s) 220, 1187, 1804
Hin1I GRCGYC 1 cut(s) 384
Hin1II CATG 8 cut(s) 932, 1143, 1582, 1678, 1934, 2080, 2252, 2399
Hin6I GCGC 3 cut(s) 218, 1185, 1802
HinP1I GCGC 3 cut(s) 218, 1185, 1802
HincII GTYRAC 1 cut(s) 6
HindII GTYRAC 1 cut(s) 6
HpaII CCGG 5 cut(s) 46, 136, 154, 342, 2518
HphI GGTGA 7 cut(s) 22, 1188, 1333, 1653, 1784, 2120, 2153
Hpy166II GTNNAC 2 cut(s) 6, 1083
Hpy8I GTNNAC 2 cut(s) 6, 1083
Hpy99I CGWCG 2 cut(s) 10, 389
HpyCH4IV ACGT 2 cut(s) 384, 1069
HpyF10VI GCNNNNNNNGC 6 cut(s) 206, 215, 548, 1412, 1874, 2216
HpySE526I ACGT 2 cut(s) 384, 1069
Hsp92I GRCGYC 1 cut(s) 384
Hsp92II CATG 8 cut(s) 932, 1143, 1582, 1678, 1934, 2080, 2252, 2399
HspAI GCGC 3 cut(s) 218, 1185, 1802
Ksp22I TGATCA 2 cut(s) 925, 1948
LmnI GCTCC 8 cut(s) 98, 138, 662, 692, 1058, 1582, 2207, 2538
LweI GCATC 4 cut(s) 166, 491, 952, 2250
MabI ACCWGGT 2 cut(s) 427, 2617
MaeI CTAG 4 cut(s) 792, 800, 1616, 2202
MaeII ACGT 2 cut(s) 384, 1069
MaeIII GTNAC 7 cut(s) 856, 1635, 1659, 2227, 2338, 2378, 2621
MfeI CAATTG 1 cut(s) 543
MflI RGATCY 1 cut(s) 273
MhlI GDGCHC 2 cut(s) 881, 1587
MlsI TGGCCA 1 cut(s) 2326
MluNI TGGCCA 1 cut(s) 2326
MlyI GAGTC 2 cut(s) 1354, 2425
MmeI TCCRAC 6 cut(s) 472, 640, 735, 2238, 2296, 2516
Mox20I TGGCCA 1 cut(s) 2326
Mph1103I ATGCAT 1 cut(s) 2422
MroXI GAANNNNTTC 3 cut(s) 237, 1380, 1745
MscI TGGCCA 1 cut(s) 2326
MseI TTAA 8 cut(s) 444, 1545, 1850, 2067, 2193, 2547, 2646, 2701
MslI CAYNNNNRTG 1 cut(s) 1797
Msp20I TGGCCA 1 cut(s) 2326
MspA1I CMGCKG 2 cut(s) 1797, 2213
MspI CCGG 5 cut(s) 46, 136, 154, 342, 2518
MspR9I CCNGG 7 cut(s) 47, 342, 429, 690, 2307, 2439, 2619
MunI CAATTG 1 cut(s) 543
Mva1269I GAATGC 3 cut(s) 307, 1380, 1745
MvaI CCWGG 5 cut(s) 429, 690, 2307, 2439, 2619
MvnI CGCG 2 cut(s) 58, 218
MwoI GCNNNNNNNGC 6 cut(s) 206, 215, 548, 1412, 1874, 2216
NciI CCSGG 2 cut(s) 47, 342
NdeI CATATG 1 cut(s) 2137
NlaIII CATG 8 cut(s) 932, 1143, 1582, 1678, 1934, 2080, 2252, 2399
NlaIV GGNNCC 3 cut(s) 62, 1099, 2209
NmuCI GTSAC 3 cut(s) 1659, 2378, 2621
NsbI TGCGCA 1 cut(s) 1803
NsiI ATGCAT 1 cut(s) 2422
NspI RCATGY 1 cut(s) 1678
OliI CACNNNNGTG 1 cut(s) 1797
PaqCI CACCTGC 2 cut(s) 1207, 2455
PctI GAATGC 3 cut(s) 307, 1380, 1745
PdmI GAANNNNTTC 3 cut(s) 237, 1380, 1745
PfeI GAWTC 9 cut(s) 316, 352, 731, 767, 895, 1553, 1652, 2120, 2353
PflFI GACNNNGTC 1 cut(s) 2619
PfoI TCCNGGA 2 cut(s) 340, 2437
PleI GAGTC 2 cut(s) 1353, 2425
PpsI GAGTC 2 cut(s) 1353, 2425
PpuMI RGGWCCY 1 cut(s) 1314
PshBI ATTAAT 1 cut(s) 2193
Psp124BI GAGCTC 1 cut(s) 1587
Psp5II RGGWCCY 1 cut(s) 1314
Psp6I CCWGG 5 cut(s) 427, 688, 2305, 2437, 2617
PspEI GGTNACC 1 cut(s) 1635
PspGI CCWGG 5 cut(s) 427, 688, 2305, 2437, 2617
PspN4I GGNNCC 3 cut(s) 62, 1099, 2209
PspPI GGNCC 3 cut(s) 1314, 2615, 2655
PspPPI RGGWCCY 1 cut(s) 1314
PstI CTGCAG 3 cut(s) 1047, 1207, 2452
PstNI CAGNNNCTG 3 cut(s) 860, 1472, 1655
PsuI RGATCY 1 cut(s) 273
PsyI GACNNNGTC 1 cut(s) 2619
RsaI GTAC 6 cut(s) 334, 599, 1138, 1577, 1673, 1770
RsaNI GTAC 6 cut(s) 333, 598, 1137, 1576, 1672, 1769
RseI CAYNNNNRTG 1 cut(s) 1797
SacI GAGCTC 1 cut(s) 1587
SalI GTCGAC 1 cut(s) 4
SaqAI TTAA 8 cut(s) 444, 1545, 1850, 2067, 2193, 2547, 2646, 2701
Sau96I GGNCC 3 cut(s) 1314, 2615, 2655
ScaI AGTACT 1 cut(s) 1770
SchI GAGTC 2 cut(s) 1354, 2425
ScrFI CCNGG 7 cut(s) 47, 342, 429, 690, 2307, 2439, 2619
SduI GDGCHC 2 cut(s) 881, 1587
SexAI ACCWGGT 2 cut(s) 427, 2617
SfaNI GCATC 4 cut(s) 166, 491, 952, 2250
SfcI CTRYAG 6 cut(s) 843, 1043, 1203, 1417, 1647, 2448
SinI GGWCC 3 cut(s) 1314, 2615, 2655
SmiMI CAYNNNNRTG 1 cut(s) 1797
SmlI CTYRAG 2 cut(s) 245, 2666
SmoI CTYRAG 2 cut(s) 245, 2666
SpeI ACTAGT 1 cut(s) 2201
SsiI CCGC 9 cut(s) 58, 198, 216, 998, 1101, 1795, 1886, 2211, 2580
SspI AATATT 1 cut(s) 1530
SspMI CTAG 4 cut(s) 792, 800, 1616, 2202
SstI GAGCTC 1 cut(s) 1587
StyD4I CCNGG 7 cut(s) 45, 340, 427, 688, 2305, 2437, 2617
StyI CCWWGG 2 cut(s) 1317, 1537
TaiI ACGT 2 cut(s) 387, 1072
TaqI TCGA 4 cut(s) 5, 1039, 1239, 1348
TatI WGTACW 4 cut(s) 332, 597, 1136, 1768
TauI GCSGC 3 cut(s) 61, 2213, 2582
TfiI GAWTC 9 cut(s) 316, 352, 731, 767, 895, 1553, 1652, 2120, 2353
Tru1I TTAA 8 cut(s) 444, 1545, 1850, 2067, 2193, 2547, 2646, 2701
Tru9I TTAA 8 cut(s) 444, 1545, 1850, 2067, 2193, 2547, 2646, 2701
TscAI CASTG 7 cut(s) 44, 169, 365, 397, 1441, 1630, 2387
TseFI GTSAC 3 cut(s) 1659, 2378, 2621
Tsp45I GTSAC 3 cut(s) 1659, 2378, 2621
TspGWI ACGGA 1 cut(s) 929
TspRI CASTG 7 cut(s) 44, 169, 365, 397, 1441, 1630, 2387
Tth111I GACNNNGTC 1 cut(s) 2619
VpaK11BI GGWCC 3 cut(s) 1314, 2615, 2655
VspI ATTAAT 1 cut(s) 2193
XapI RAATTY 4 cut(s) 556, 850, 978, 2406
XbaI TCTAGA 1 cut(s) 799
XceI RCATGY 1 cut(s) 1678
XmiI GTMKAC 1 cut(s) 5
XmnI GAANNNNTTC 3 cut(s) 237, 1380, 1745
XspI CTAG 4 cut(s) 792, 800, 1616, 2202
ZraI GACGTC 1 cut(s) 385
ZrmI AGTACT 1 cut(s) 1770
Zsp2I ATGCAT 1 cut(s) 2422
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.