RLG00000031160

Chaperone protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0008846
Physical Location & Seq
Reverse (-)
2624486 .. 2630883
6398 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000031160

Sequence Viewer

Length: 2631 bp
ATGGGAGGTGAACCCACAAAACTTACTAAATTTCAGAGTCTCTCTCTCTCTCTCTCTCTCTCTCTGCTTCACGCTCCGGTGAGGTTGGACGGCGCAAGGAGTCATTGCCGAGAACGACCGTCTGGACGCGTTGGACTTCCACACCTTGACGTGGAGCTTGCCGTCGTCGCCGATCTCGGCGTCGGTTTTGAGGAAGTCGCTGCCGTCAAGGAATATGACATCGGACTCGACCTTGAAGGAGACGATGGAGGGAACGGTCTCCGGGAACTGCTCCATTATCAGCAGCTTGGCTCCGAGGCTCGTCCTTCACCTTCAGCCTCTCTAGAATCTCGAATTGGTGCTTCTCCTCCGGCACCGCCTTTTCGTGCTTGTGTTGCTCAATCTCTTGCCTTAGCTCCGCTTCTCTGGATGACAATCCCTCCGCCGCTCGGTCCAACTCTGCAACTATTGAACTGTCGTCCTCGGCCATCTCCGGCTGCTGTGCCGGGTTCCAGTGAGATTCTAATCCCCATTCTTCAAAATTGGGGCTTTTTTTTTTGTTCAAAAAAAATTCCCCAAATTCTGTGCTTTCTTCTCCAATTCCATTTTCCGGCAACTAATTCGATTGCTTCATCGGAAAAAGGTATGACAGGGATTGATGCAGAGCTATGCATGGAGGAGTTTGTGGCGAAAATCGAAGTGGAGGATCAGGAGAAGTTGGAGCTGGAGTATGGTGTTGAAATCGAAGCAGAGGCCGTGGTGGATGCGTGCCGAATCATTAAGCAGTACCCTGATGTTTTTCAGTTTAATTGTAGAGGAACACTGGATGATACCGAGAGGGCTATTTTGCAAATGAAGGTAGTAGAGCTTCTAGAGGAGGCTTGTTTAAGATTGAGGCATAAGTTTGACTACTCGAGAGAAGGAGAGGATGAACTAGAGGTGGGGGAGTACAGGTTGCATCGTGCACTTGTTGAGTTGAATGAAATCGAAAAAGAAAGAGAGCCATCCACCCAAAAATGGAGGGATCGTGTGGCCAAGGAACGCGAAGAACTAAATGATGTGTGGAACAAGTTGGAGATAAAGTGGTTGGAATTACAAGCTTCACGGCAGAGATATGACATCAGAGCTCGGGAGGCACTTTTGTTGGAAAGGATGCGGGAAGGGCTGGTTTACTATCTAAATGAGGAAAGATCGAAGGAAAATTTCTCTGGGTTGTTGCAATGGCTTGATGAACATGTGACTGAGCTTTTATATACAACTCGCAAAGATTTTAAGCATGAGCTGACCGTTAGCTCGCATGCTATTGCACTGGCAGCAAGCTTGTTGATTGATGCTCCACCATCGCAGTTGCTTTCCGAATCACCAGTACTTCAGAACCATGAATCAATTAGGAGGGTAATTGGACAAGAACATGTTCTACTTGCAGTCAGTGCTGCTTTATCGAGGCAGAGGCCTCCACGACGCCCTATTGGATCCTTCATCTTCATGTGTGGATCCGGTTGTGGGAGGACAGAAATTGCCAAACTTTTGGCCACTCTAGTCTTTGGTAAAAAAGACATGCTAACCGAGTTTGATCTAGAAAAGTACACAGCACCAAATTCTTTATCACGCCTTCTTGGTGTTCTCTGTAGTAGCCACATTGAACCAGGCAAGAAGGGAGAGCTATGTGTTAAGAAGAGGCATCTAGGTGTCATTTTGTTTGACAATGTTGACAAGGCTCCTGTGCCTATTATTGAGCTTTTGACCCAGATTATAGGCTTTGGTTATCTAGTAGATGGTAATGGGAATAGTGTTGACTTCACTAATACGATGATCATCATGACGACAAATATTGGATGTGATCAATTGTGGCCGTGGAATTGCAAATGTGCTGATGAAGTTCAAAAGTTTCCTGTCAAAGAGGGATTATTTGATGATGCATGGGAAAGAAATCATAATTTCTGTTACCTATCACTTCTGAGGGAGACAAAAAATCATTTTGGACCTCAATTTCTTGAATACGTAGATGATGTGATTGGATTTAGGTCTCTTTCCTCTCAACAATTGAAGGCTGTTGCTAGGCTCCAGCTAAGGGACCTTGCTGTGTACATGACCCAGAAGGGCCTCATCATTTATTCCTCTGAAGCTGCATTGGATATTATTGTGCGGAGATCAGCTTGGCCTGGAGATCGAATTAAAGGTGGAGAGAAAATAAGGATGTGGCTGGAACAGAACTTGGTCCCTGTGCTCTTCGAGATGATTTCAAAGAATGAGATATCTGATTTATCTATCATGTATATTGAAGCGTCAGTGGAGTCGGATCAATTGTCTTTCAGAATGGAAAAGACTGGACGTCTATTAGAAGAACGAGACGTTAATCAGTTAGCCTCTTTAAAGGAATTGAGATTAATGTACCAAAAAGAGAAAGAAAGAGCAAAGCGAATCTACATGCTGAGAAAATTTCAAAACAAATTGATGGCTAGTGCAAATGCTGGATTTGATCATGTGACGAATGTTGTTCAAGATCTGGTCAATATAATTCAGGATCTCATTACAATTCCCGGTAGCATCGTCAGGTCCTTCCTGGATAATCCTAAAAAGGTGGCAATGGCGGCCTTGAATGAGGATGAGGTTAGGCAGAACAAGAGGGCAAAAAAAGGGACCAAGGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04213 map04213
Pfam Domains
Protein Families
AAA_2

Protein Analysis

877

Amino Acids

99.07

Weight (kDa)

5.77

Isoelectric Point (pI)

49.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_2 PF07724 481 - 658 1.3e-21 AAA domain (Cdc48 subfamily)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2314
AccB1I GGYRCC 1 cut(s) 352
AccBSI CCGCTC 1 cut(s) 427
AccII CGCG 2 cut(s) 129, 1023
AciI CCGC 7 cut(s) 356, 398, 422, 425, 1135, 2125, 2570
AclWI GGATC 8 cut(s) 693, 1011, 1446, 1459, 1467, 1480, 2286, 2511
AcoI YGGCCR 4 cut(s) 464, 1011, 1509, 1829
AcsI RAATTY 6 cut(s) 29, 549, 558, 1180, 1576, 2417
AcuI CTGAAG 3 cut(s) 297, 1334, 2121
AcyI GRCGYC 3 cut(s) 180, 1441, 2311
AfaI GTAC 6 cut(s) 767, 929, 1347, 1565, 2066, 2372
AfiI CCNNNNNNNGG 6 cut(s) 151, 428, 589, 996, 1482, 2050
AflIII ACRYGT 3 cut(s) 127, 1213, 1390
AhdI GACNNNNNGTC 1 cut(s) 2310
AjiI CACGTC 1 cut(s) 151
AjnI CCWGG 3 cut(s) 1624, 2140, 2541
AjuI GAANNNNNNNTTGG 4 cut(s) 318, 350, 570, 602
Alw21I GWGCWC 3 cut(s) 946, 1108, 2208
Alw26I GTCTC 6 cut(s) 44, 234, 263, 1937, 2010, 2322
Alw44I GTGCAC 1 cut(s) 942
AlwI GGATC 8 cut(s) 693, 1011, 1446, 1459, 1467, 1480, 2286, 2511
Ama87I CYCGRG 2 cut(s) 892, 1107
AoxI GGCC 9 cut(s) 464, 732, 1011, 1430, 1509, 1829, 2080, 2138, 2571
ApaLI GTGCAC 1 cut(s) 942
ApeKI GCWGC 6 cut(s) 200, 283, 476, 1292, 1412, 2105
ApoI RAATTY 6 cut(s) 29, 549, 558, 1180, 1576, 2417
AseI ATTAAT 1 cut(s) 2366
Asp700I GAANNNNTTC 1 cut(s) 1392
AspLEI GCGC 1 cut(s) 95
AspS9I GGNCC 7 cut(s) 431, 1961, 2053, 2080, 2197, 2535, 2619
AsuC2I CCSGG 3 cut(s) 263, 486, 2520
AsuHPI GGTGA 4 cut(s) 20, 91, 300, 1332
AvaI CYCGRG 2 cut(s) 892, 1107
AvaII GGWCC 6 cut(s) 431, 1961, 2053, 2197, 2535, 2619
BaeGI GKGCMC 1 cut(s) 946
BalI TGGCCA 2 cut(s) 1013, 1511
BamHI GGATCC 2 cut(s) 1451, 1472
BanI GGYRCC 1 cut(s) 352
BanII GRGCYC 1 cut(s) 1108
BarI GAAGNNNNNNTAC 2 cut(s) 831, 863
Bbv12I GWGCWC 3 cut(s) 946, 1108, 2208
BbvI GCAGC 6 cut(s) 187, 295, 463, 1304, 1399, 2092
BccI CCATC 6 cut(s) 239, 475, 991, 1327, 1748, 2428
BceAI ACGGC 6 cut(s) 106, 146, 188, 719, 1100, 1816
BcgI CGANNNNNNTGC 2 cut(s) 582, 616
BciT130I CCWGG 3 cut(s) 1626, 2142, 2543
BclI TGATCA 3 cut(s) 1791, 1819, 2458
BcnI CCSGG 3 cut(s) 263, 486, 2520
BcoDI GTCTC 6 cut(s) 44, 234, 263, 1937, 2010, 2322
BfaI CTAG 9 cut(s) 323, 851, 914, 1517, 1556, 1664, 1748, 2037, 2439
BfmI CTRYAG 1 cut(s) 1606
BglII AGATCT 1 cut(s) 2482
BisI GCNGC 8 cut(s) 201, 284, 425, 477, 1293, 1413, 2106, 2571
BlsI GCNGC 8 cut(s) 202, 285, 426, 478, 1294, 1414, 2107, 2572
BmcAI AGTACT 1 cut(s) 1347
Bme1390I CCNGG 6 cut(s) 263, 486, 1626, 2142, 2520, 2543
Bme18I GGWCC 6 cut(s) 431, 1961, 2053, 2197, 2535, 2619
BmeRI GACNNNNNGTC 1 cut(s) 2310
BmeT110I CYCGRG 2 cut(s) 892, 1107
BmgBI CACGTC 1 cut(s) 151
BmgT120I GGNCC 7 cut(s) 431, 1961, 2053, 2080, 2197, 2535, 2619
BmrFI CCNGG 6 cut(s) 263, 486, 1626, 2142, 2520, 2543
BmsI GCATC 8 cut(s) 628, 733, 946, 1122, 1300, 1669, 1885, 2535
BplI GAGNNNNNCTC 2 cut(s) 28, 60
BpmI CTGGAG 3 cut(s) 725, 2027, 2163
Bpu10I CCTNAGC 2 cut(s) 391, 2048
BpuMI CCSGG 3 cut(s) 263, 486, 2520
BsaAI YACGTR 1 cut(s) 1981
BsaBI GATNNNNATC 3 cut(s) 413, 503, 1793
BsaHI GRCGYC 3 cut(s) 180, 1441, 2311
BsaI GGTCTC 2 cut(s) 263, 2010
BsaJI CCNNGG 6 cut(s) 294, 461, 735, 1014, 1832, 2622
BsaWI WCCGGW 2 cut(s) 76, 1475
Bsc4I CCNNNNNNNGG 6 cut(s) 151, 428, 589, 996, 1482, 2050
Bse1I ACTGG 5 cut(s) 492, 807, 1293, 1343, 2311
Bse3DI GCAATG 3 cut(s) 103, 1205, 2571
Bse8I GATNNNNATC 3 cut(s) 413, 503, 1793
BseBI CCWGG 3 cut(s) 1626, 2142, 2543
BseDI CCNNGG 6 cut(s) 294, 461, 735, 1014, 1832, 2622
BseGI GGATG 9 cut(s) 414, 748, 811, 913, 983, 1137, 1820, 2181, 2590
BseJI GATNNNNATC 3 cut(s) 413, 503, 1793
BseLI CCNNNNNNNGG 6 cut(s) 151, 428, 589, 996, 1482, 2050
BseMI GCAATG 3 cut(s) 103, 1205, 2571
BseMII CTCAG 3 cut(s) 1212, 1928, 2402
BseNI ACTGG 5 cut(s) 492, 807, 1293, 1343, 2311
BseRI GAGGAG 3 cut(s) 336, 671, 869
BseSI GKGCMC 1 cut(s) 946
BseXI GCAGC 6 cut(s) 187, 295, 463, 1304, 1399, 2092
Bsh1236I CGCG 2 cut(s) 129, 1023
Bsh1285I CGRYCG 1 cut(s) 119
BshFI GGCC 9 cut(s) 466, 734, 1013, 1432, 1511, 1831, 2082, 2140, 2573
BshNI GGYRCC 1 cut(s) 352
BsiEI CGRYCG 1 cut(s) 119
BsiHKAI GWGCWC 3 cut(s) 946, 1108, 2208
BsiHKCI CYCGRG 2 cut(s) 892, 1107
BsiSI CCGG 8 cut(s) 77, 262, 350, 473, 485, 590, 1476, 2520
BslFI GGGAC 2 cut(s) 2066, 2183
BslI CCNNNNNNNGG 6 cut(s) 151, 428, 589, 996, 1482, 2050
BsmAI GTCTC 6 cut(s) 44, 234, 263, 1937, 2010, 2322
BsmBI CGTCTC 2 cut(s) 234, 2322
BsmFI GGGAC 2 cut(s) 2066, 2183
BsnI GGCC 9 cut(s) 466, 734, 1013, 1432, 1511, 1831, 2082, 2140, 2573
Bso31I GGTCTC 2 cut(s) 263, 2010
BsoBI CYCGRG 2 cut(s) 892, 1107
Bsp1286I GDGCHC 3 cut(s) 946, 1108, 2208
Bsp1407I TGTACA 1 cut(s) 2064
BspACI CCGC 7 cut(s) 356, 398, 422, 425, 1135, 2125, 2570
BspANI GGCC 9 cut(s) 466, 734, 1013, 1432, 1511, 1831, 2082, 2140, 2573
BspCNI CTCAG 3 cut(s) 1213, 1929, 2403
BspFNI CGCG 2 cut(s) 129, 1023
BspHI TCATGA 1 cut(s) 1797
BspPI GGATC 8 cut(s) 693, 1011, 1446, 1459, 1467, 1480, 2286, 2511
BspQI GCTCTTC 1 cut(s) 2213
BspT107I GGYRCC 1 cut(s) 352
BspTNI GGTCTC 2 cut(s) 263, 2010
BsrBI CCGCTC 1 cut(s) 427
BsrDI GCAATG 3 cut(s) 103, 1205, 2571
BsrGI TGTACA 1 cut(s) 2064
BsrI ACTGG 5 cut(s) 492, 807, 1293, 1343, 2311
BssECI CCNNGG 6 cut(s) 294, 461, 735, 1014, 1832, 2622
BssNI GRCGYC 3 cut(s) 180, 1441, 2311
BssT1I CCWWGG 2 cut(s) 1014, 2622
Bst2UI CCWGG 3 cut(s) 1626, 2142, 2543
Bst4CI ACNGT 4 cut(s) 120, 257, 455, 1267
Bst6I CTCTTC 2 cut(s) 1649, 2213
BstACI GRCGYC 3 cut(s) 180, 1441, 2311
BstAPI GCANNNNNTGC 1 cut(s) 1409
BstAUI TGTACA 1 cut(s) 2064
BstBAI YACGTR 1 cut(s) 1981
BstC8I GCNNGC 5 cut(s) 159, 748, 1274, 1278, 1297
BstDEI CTNAG 5 cut(s) 391, 1221, 1937, 2048, 2411
BstDSI CCRYGG 2 cut(s) 735, 1832
BstF5I GGATG 9 cut(s) 414, 748, 811, 913, 983, 1137, 1820, 2181, 2590
BstFNI CGCG 2 cut(s) 129, 1023
BstHHI GCGC 1 cut(s) 95
BstMAI GTCTC 6 cut(s) 44, 234, 263, 1937, 2010, 2322
BstMCI CGRYCG 1 cut(s) 119
BstMWI GCNNNNNNNGC 7 cut(s) 167, 374, 1112, 1141, 1292, 1409, 2570
BstNI CCWGG 3 cut(s) 1626, 2142, 2543
BstNSI RCATGY 5 cut(s) 1217, 1280, 1394, 1540, 2410
BstSCI CCNGG 6 cut(s) 261, 484, 1624, 2140, 2518, 2541
BstSFI CTRYAG 1 cut(s) 1606
BstSLI GKGCMC 1 cut(s) 946
BstSNI TACGTA 1 cut(s) 1981
BstUI CGCG 2 cut(s) 129, 1023
BstV1I GCAGC 6 cut(s) 187, 295, 463, 1304, 1399, 2092
BstX2I RGATCY 4 cut(s) 1451, 1472, 2482, 2503
BstXI CCANNNNNNTGG 1 cut(s) 1507
BstYI RGATCY 4 cut(s) 1451, 1472, 2482, 2503
BsuRI GGCC 9 cut(s) 466, 734, 1013, 1432, 1511, 1831, 2082, 2140, 2573
BtgI CCRYGG 2 cut(s) 735, 1832
BtgZI GCGATG 1 cut(s) 1305
BtrI CACGTC 1 cut(s) 151
BtsCI GGATG 9 cut(s) 414, 748, 811, 913, 983, 1137, 1820, 2181, 2590
BtsIMutI CAGTG 5 cut(s) 499, 800, 1286, 1414, 2274
Cac8I GCNNGC 5 cut(s) 159, 748, 1274, 1278, 1297
CciI TCATGA 1 cut(s) 1797
CfoI GCGC 1 cut(s) 95
Cfr13I GGNCC 7 cut(s) 431, 1961, 2053, 2080, 2197, 2535, 2619
CseI GACGC 4 cut(s) 135, 169, 1449, 2253
Csp6I GTAC 6 cut(s) 766, 928, 1346, 1564, 2065, 2371
CviQI GTAC 6 cut(s) 766, 928, 1346, 1564, 2065, 2371
DdeI CTNAG 5 cut(s) 391, 1221, 1937, 2048, 2411
DraI TTTAAA 1 cut(s) 2352
DriI GACNNNNNGTC 1 cut(s) 2310
EaeI YGGCCR 4 cut(s) 464, 1011, 1509, 1829
Eam1104I CTCTTC 2 cut(s) 1649, 2213
Eam1105I GACNNNNNGTC 1 cut(s) 2310
EarI CTCTTC 2 cut(s) 1649, 2213
EciI GGCGGA 1 cut(s) 411
Ecl136II GAGCTC 1 cut(s) 1106
Eco105I TACGTA 1 cut(s) 1981
Eco130I CCWWGG 2 cut(s) 1014, 2622
Eco147I AGGCCT 1 cut(s) 1432
Eco24I GRGCYC 1 cut(s) 1108
Eco31I GGTCTC 2 cut(s) 263, 2010
Eco32I GATATC 1 cut(s) 2235
Eco47I GGWCC 6 cut(s) 431, 1961, 2053, 2197, 2535, 2619
Eco53kI GAGCTC 1 cut(s) 1106
Eco57I CTGAAG 3 cut(s) 297, 1334, 2121
Eco88I CYCGRG 2 cut(s) 892, 1107
EcoICRI GAGCTC 1 cut(s) 1106
EcoO109I RGGNCCY 3 cut(s) 2053, 2080, 2535
EcoRII CCWGG 3 cut(s) 1624, 2140, 2541
EcoRV GATATC 1 cut(s) 2235
EcoT14I CCWWGG 2 cut(s) 1014, 2622
EcoT22I ATGCAT 2 cut(s) 653, 1900
EcoT38I GRGCYC 1 cut(s) 1108
ErhI CCWWGG 2 cut(s) 1014, 2622
Esp3I CGTCTC 2 cut(s) 234, 2322
FaqI GGGAC 2 cut(s) 2066, 2183
FauI CCCGC 1 cut(s) 1128
FbaI TGATCA 3 cut(s) 1791, 1819, 2458
Fnu4HI GCNGC 8 cut(s) 201, 284, 425, 477, 1293, 1413, 2106, 2571
FokI GGATG 9 cut(s) 421, 755, 818, 920, 970, 1144, 1827, 2188, 2597
FriOI GRGCYC 1 cut(s) 1108
Fsp4HI GCNGC 8 cut(s) 201, 284, 425, 477, 1293, 1413, 2106, 2571
FspBI CTAG 9 cut(s) 323, 851, 914, 1517, 1556, 1664, 1748, 2037, 2439
GlaI GCGC 1 cut(s) 94
GluI GCNGC 8 cut(s) 201, 284, 425, 477, 1293, 1413, 2106, 2571
GsuI CTGGAG 3 cut(s) 725, 2027, 2163
HaeIII GGCC 9 cut(s) 466, 734, 1013, 1432, 1511, 1831, 2082, 2140, 2573
HapII CCGG 8 cut(s) 77, 262, 350, 473, 485, 590, 1476, 2520
HgaI GACGC 4 cut(s) 135, 169, 1449, 2253
HhaI GCGC 1 cut(s) 95
Hin1I GRCGYC 3 cut(s) 180, 1441, 2311
Hin6I GCGC 1 cut(s) 93
HinP1I GCGC 1 cut(s) 93
HincII GTYRAC 2 cut(s) 1690, 1774
HindII GTYRAC 2 cut(s) 1690, 1774
HindIII AAGCTT 2 cut(s) 1077, 1297
HpaII CCGG 8 cut(s) 77, 262, 350, 473, 485, 590, 1476, 2520
HphI GGTGA 4 cut(s) 20, 91, 300, 1332
Hpy166II GTNNAC 7 cut(s) 11, 944, 1150, 1566, 1690, 1774, 2065
Hpy8I GTNNAC 7 cut(s) 11, 944, 1150, 1566, 1690, 1774, 2065
Hpy99I CGWCG 4 cut(s) 167, 170, 185, 1443
HpyCH4III ACNGT 4 cut(s) 120, 257, 455, 1267
HpyCH4IV ACGT 4 cut(s) 150, 1980, 2311, 2331
HpyF10VI GCNNNNNNNGC 7 cut(s) 167, 374, 1112, 1141, 1292, 1409, 2570
HpyF3I CTNAG 5 cut(s) 391, 1221, 1937, 2048, 2411
HpySE526I ACGT 4 cut(s) 150, 1980, 2311, 2331
Hsp92I GRCGYC 3 cut(s) 180, 1441, 2311
HspAI GCGC 1 cut(s) 93
Ksp22I TGATCA 3 cut(s) 1791, 1819, 2458
LguI GCTCTTC 1 cut(s) 2213
LmnI GCTCC 9 cut(s) 79, 154, 276, 296, 400, 700, 1318, 1702, 2046
Lsp1109I GCAGC 6 cut(s) 187, 295, 463, 1304, 1399, 2092
LweI GCATC 8 cut(s) 628, 733, 946, 1122, 1300, 1669, 1885, 2535
MaeI CTAG 9 cut(s) 323, 851, 914, 1517, 1556, 1664, 1748, 2037, 2439
MaeII ACGT 4 cut(s) 150, 1980, 2311, 2331
MaeIII GTNAC 3 cut(s) 1216, 1922, 2464
MbiI CCGCTC 1 cut(s) 427
MboII GAAGA 7 cut(s) 506, 563, 1037, 1453, 1666, 2200, 2333
MfeI CAATTG 3 cut(s) 1823, 2021, 2282
MflI RGATCY 4 cut(s) 1451, 1472, 2482, 2503
MhlI GDGCHC 3 cut(s) 946, 1108, 2208
MlsI TGGCCA 2 cut(s) 1013, 1511
MluI ACGCGT 1 cut(s) 127
MluNI TGGCCA 2 cut(s) 1013, 1511
MlyI GAGTC 4 cut(s) 46, 109, 219, 2282
MmeI TCCRAC 8 cut(s) 66, 112, 458, 678, 1032, 1047, 1104, 2256
Mox20I TGGCCA 2 cut(s) 1013, 1511
Mph1103I ATGCAT 2 cut(s) 653, 1900
MroXI GAANNNNTTC 1 cut(s) 1392
MscI TGGCCA 2 cut(s) 1013, 1511
MseI TTAA 9 cut(s) 759, 786, 866, 1251, 1650, 2154, 2334, 2351, 2366
MslI CAYNNNNRTG 2 cut(s) 1463, 1665
Msp20I TGGCCA 2 cut(s) 1013, 1511
MspI CCGG 8 cut(s) 77, 262, 350, 473, 485, 590, 1476, 2520
MspR9I CCNGG 6 cut(s) 263, 486, 1626, 2142, 2520, 2543
MunI CAATTG 3 cut(s) 1823, 2021, 2282
MvaI CCWGG 3 cut(s) 1626, 2142, 2543
MvnI CGCG 2 cut(s) 129, 1023
MwoI GCNNNNNNNGC 7 cut(s) 167, 374, 1112, 1141, 1292, 1409, 2570
NciI CCSGG 3 cut(s) 263, 486, 2520
NmeAIII GCCGAG 3 cut(s) 134, 156, 442
NmuCI GTSAC 2 cut(s) 1216, 2464
NsiI ATGCAT 2 cut(s) 653, 1900
NspI RCATGY 5 cut(s) 1217, 1280, 1394, 1540, 2410
PaeI GCATGC 1 cut(s) 1280
PaeR7I CTCGAG 1 cut(s) 892
PagI TCATGA 1 cut(s) 1797
PceI AGGCCT 1 cut(s) 1432
PciI ACATGT 2 cut(s) 1213, 1390
PciSI GCTCTTC 1 cut(s) 2213
PdmI GAANNNNTTC 1 cut(s) 1392
PfeI GAWTC 6 cut(s) 326, 499, 753, 1337, 1361, 2400
PfoI TCCNGGA 2 cut(s) 261, 2541
PkrI GCNGC 8 cut(s) 202, 285, 426, 478, 1294, 1414, 2107, 2572
PleI GAGTC 4 cut(s) 45, 108, 219, 2281
PpsI GAGTC 4 cut(s) 45, 108, 219, 2281
Ppu21I YACGTR 1 cut(s) 1981
PpuMI RGGWCCY 2 cut(s) 2053, 2535
PscI ACATGT 2 cut(s) 1213, 1390
PshBI ATTAAT 1 cut(s) 2366
Psp124BI GAGCTC 1 cut(s) 1108
Psp5II RGGWCCY 2 cut(s) 2053, 2535
Psp6I CCWGG 3 cut(s) 1624, 2140, 2541
PspGI CCWGG 3 cut(s) 1624, 2140, 2541
PspPI GGNCC 7 cut(s) 431, 1961, 2053, 2080, 2197, 2535, 2619
PspPPI RGGWCCY 2 cut(s) 2053, 2535
PsrI GAACNNNNNNTAC 2 cut(s) 1380, 1412
PsuI RGATCY 4 cut(s) 1451, 1472, 2482, 2503
RsaI GTAC 6 cut(s) 767, 929, 1347, 1565, 2066, 2372
RsaNI GTAC 6 cut(s) 766, 928, 1346, 1564, 2065, 2371
RseI CAYNNNNRTG 2 cut(s) 1463, 1665
SacI GAGCTC 1 cut(s) 1108
SapI GCTCTTC 1 cut(s) 2213
SaqAI TTAA 9 cut(s) 759, 786, 866, 1251, 1650, 2154, 2334, 2351, 2366
SatI GCNGC 8 cut(s) 201, 284, 425, 477, 1293, 1413, 2106, 2571
Sau96I GGNCC 7 cut(s) 431, 1961, 2053, 2080, 2197, 2535, 2619
ScaI AGTACT 1 cut(s) 1347
SchI GAGTC 4 cut(s) 46, 109, 219, 2282
ScrFI CCNGG 6 cut(s) 263, 486, 1626, 2142, 2520, 2543
SduI GDGCHC 3 cut(s) 946, 1108, 2208
SfaNI GCATC 8 cut(s) 628, 733, 946, 1122, 1300, 1669, 1885, 2535
SfcI CTRYAG 1 cut(s) 1606
Sfr274I CTCGAG 1 cut(s) 892
SinI GGWCC 6 cut(s) 431, 1961, 2053, 2197, 2535, 2619
SlaI CTCGAG 1 cut(s) 892
SmiMI CAYNNNNRTG 2 cut(s) 1463, 1665
SmlI CTYRAG 1 cut(s) 892
SmoI CTYRAG 1 cut(s) 892
SnaBI TACGTA 1 cut(s) 1981
SphI GCATGC 1 cut(s) 1280
SseBI AGGCCT 1 cut(s) 1432
SsiI CCGC 7 cut(s) 356, 398, 422, 425, 1135, 2125, 2570
SspI AATATT 1 cut(s) 1810
SspMI CTAG 9 cut(s) 323, 851, 914, 1517, 1556, 1664, 1748, 2037, 2439
SstI GAGCTC 1 cut(s) 1108
StuI AGGCCT 1 cut(s) 1432
StyD4I CCNGG 6 cut(s) 261, 484, 1624, 2140, 2518, 2541
StyI CCWWGG 2 cut(s) 1014, 2622
TaaI ACNGT 4 cut(s) 120, 257, 455, 1267
TaiI ACGT 4 cut(s) 153, 1983, 2314, 2334
TaqII GACCGA 1 cut(s) 419
TatI WGTACW 4 cut(s) 927, 1345, 1563, 2064
TauI GCSGC 2 cut(s) 427, 2573
TfiI GAWTC 6 cut(s) 326, 499, 753, 1337, 1361, 2400
Tru1I TTAA 9 cut(s) 759, 786, 866, 1251, 1650, 2154, 2334, 2351, 2366
Tru9I TTAA 9 cut(s) 759, 786, 866, 1251, 1650, 2154, 2334, 2351, 2366
TscAI CASTG 5 cut(s) 499, 807, 1293, 1414, 2274
TseFI GTSAC 2 cut(s) 1216, 2464
TseI GCWGC 6 cut(s) 200, 283, 476, 1292, 1412, 2105
Tsp45I GTSAC 2 cut(s) 1216, 2464
TspDTI ATGAA 9 cut(s) 600, 848, 924, 975, 1224, 1374, 1447, 1453, 1869
TspRI CASTG 5 cut(s) 499, 807, 1293, 1414, 2274
VneI GTGCAC 1 cut(s) 942
VpaK11BI GGWCC 6 cut(s) 431, 1961, 2053, 2197, 2535, 2619
VspI ATTAAT 1 cut(s) 2366
XapI RAATTY 6 cut(s) 29, 549, 558, 1180, 1576, 2417
XbaI TCTAGA 3 cut(s) 322, 850, 1555
XceI RCATGY 5 cut(s) 1217, 1280, 1394, 1540, 2410
XhoI CTCGAG 1 cut(s) 892
XmnI GAANNNNTTC 1 cut(s) 1392
XspI CTAG 9 cut(s) 323, 851, 914, 1517, 1556, 1664, 1748, 2037, 2439
ZraI GACGTC 1 cut(s) 2312
ZrmI AGTACT 1 cut(s) 1347
Zsp2I ATGCAT 2 cut(s) 653, 1900
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.