Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0006644

Physical Location & Seq

Genomic Coordinates Reverse (-)

3042957 .. 3048674

Gene Structure 5718 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g05250.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1902 bp

ATGGGAGAGACGGGGAAGAGGTACCGTTCGCAGAGGGACCGAGATTACGACGGCGGGAGCAAGAAGAATCAGAAGAGGCGCGTGAATGACAGAGAAGATAGGGGCGGTGGTGGGGGCGGAGGCGATGAGGTTGTTGTGTACAGGATTCTGTGCCCTGTTGGGGTAATCGGAAGCGTGATTGGGAAGAGTGGGAAAGTGATCAATTCGATTAGACAGGATAGTAGAGCTAAGGTGAAGGTTGTGGATCCGTTTCCGGGGGCGAAAGATAGGGTCATAACTATTTATAGCTATGTTAGGGAGAAGGAGGAGGTTGATGTTGATGATGAGTTTAGTAGTGATAGGGAGCCCTTGTGTGCTGCACAGGATGCTCTATTTAAAGTGCATTCGGCTATTTCGAATGCGTTGGCTGCTGCTGGAGATTCTGATATGAGAAGGAGGGATAAGGAAGAGTGTCAGATACTTGTCCCGGCTAGCCAGTGTGCTAATGTGATAGGGAAGGCCGGGTCGACCATCAAGAAACTGAGGAGCAGGACCAGGACGAACATTAAGGTCACTGCAAAAGATGCCTCTGACCCGACGCATTCCTGTGCAATGGACTTTGACAACTTTGTTATGATAAATGGAGAATCAGAAGCAGTGAAAAAAGCATTATTTGCAGTTTCTGCAATCATATACAAGTTTCCTGCACGGGAAGAGATTTCTCTTGATACAACAGTACCGGAAGCCCGTCCAAGCATAATAATTCCATCAGATATGTCAATTTATCAATCGGGTGGATTATATAACCCTGCAGATCCTATTATTCCTTCTAGCTCACTACCTCCACTCCTAAACGCTACACATGTACCAGATCTTCAGGGTTATGCGGATACAGGGAATGCATGGCCCATATATTCATCTGCTCTTCCTTTAGTTTCTGGTTTCAGTGTAGCACCGCGATCTGAGGAATTAATTGTGAGAGTACTATGCCCTTCTGACAAGATTGGTCGTGTCATTGGAAAGGGTGGGGGTACCATTAAAAGCATAAGGCAGACTAGTGGTGCTCGAGTTGAGGTTGATGATACCAAGGATGACCGTGATGAGTGCATGATCACTGTTACTTCAACAGAGTCACCGGATGATCTGAAGTCCATGGCAGTTGAAGTTGTTCTATTGCTGCAAGGGAAGATAAATGACGAAGATGTTGACAACGTTTCTATACGGCTTCTTGTTCCATCTAAAGTTATTGGTTGTCTTATTGGAAAAAATGGTTCAATTATACATGAAATTCGGAAGAGAACAAAAGCTGACATCCGTATTTCAAAAGCTGATAAGCCTAAATGTGCTGATGCTAATGATGAACTTGTTGAGGTGGCAGGAGATCTCACTAGTTTGAGAGATGCACTTATTCAGATTGTTCTAAGGCTCCGAGACGATGTTTTGAAAGATAGAGATGGTGTTCATAACCCCACTATTGGTGCTGACTCTTTATTCCCAGGTAGCACTGGTCTCTCTTTGCCGTCTGTGCTGCCTTCTGTCCCCCAGGTTGCTCCCATAGGTTATGATCATAGGGCTGAAAGTGGAAGCCGCTTGGGCATGCTTTCTTCCAGCGGCCTCTTTGGATATGGATCTCTGCCGATGGGGGAAGATGGCTACGGATCAGTGTCTTCATATTCATCCAAGTTATATGGAGGGTTGCCACCCCCTTCAACACTTGAGATGCTCATTCCTGCCAGTGCAGCAGGTAAGGTGATCGGCAAAGGAGGGGCAAATATTGCTAACATTCGGAAGATATCAGGAGCAATGATAGAGATTCCCGAGTCCAAATCTTCCCGGGGTGATCGTATTGCTCATATTTCTGGCACAGCTGAACAGAAGCGGACAGCAGAGAACTTGATCCAGGCATTTATAATGGCCCCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1

Protein Analysis

634

Amino Acids

67.75

Weight (kDa)

6.7

Isoelectric Point (pI)

42.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KH_1	PF00013	47 - 96	3.1e-11	KH domain
KH_2	PF07650	127 - 184	8.4e-06	KH domain
KH_1	PF00013	151 - 220	1.3e-12	KH domain
KH_1	PF00013	319 - 370	2.8e-14	KH domain
KH_1	PF00013	400 - 465	3.1e-13	KH domain
KH_1	PF00013	564 - 627	9.1e-17	KH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006644)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G46190 AT5G46190 AT5G46190 AT5G46190
fragaria_vesca	FvH4_3g05250 FvH4_3g05250 FvH4_3g05250 FvH4_3g05250 FvH4_3g05250
malus_domestica	MD05G1281400.v1.1 MD10G1260300.v1.1
prunus_persica	Prupe.4G083200_v2.0.a1 Prupe.4G083200_v2.0.a1 Prupe.4G083200_v2.0.a1
pyrus_communis	pycom05g26150 pycom10g21620
rosa_chinensis	RchiOBHm_Chr5g0014461
rosa_laevigata	RLG00000032112
rosa_multiflora	Rmu_sc0004194.1_g000002
rosa_roxburghii	Rroxscaffold_1G00062110
rosa_rugosa	Rorug05G0018400
rosa_samantha	Rh5AG113400 Rh5BG110100 Rh5CG121900 Rh5DG109200
rosa_wichuraiana	Rw5G009840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1889
Acc36I	ACCTGC	1 cut(s)	1712
Acc65I	GGTACC	2 cut(s)	21, 1010
AccB1I	GGYRCC	2 cut(s)	21, 1010
AccI	GTMKAC	1 cut(s)	506
AccII	CGCG	2 cut(s)	81, 937
AciI	CCGC	8 cut(s)	54, 105, 117, 866, 935, 1567, 1590, 1858
AclI	AACGTT	1 cut(s)	1191
AclWI	GGATC	6 cut(s)	239, 252, 788, 1615, 1645, 1870
AcsI	RAATTY	1 cut(s)	1266
AcuI	CTGAAG	2 cut(s)	839, 1145
AfaI	GTAC	6 cut(s)	23, 140, 717, 846, 963, 1012
AfiI	CCNNNNNNNGG	3 cut(s)	160, 254, 1454
AflIII	ACRYGT	1 cut(s)	841
AgsI	TTSAA	6 cut(s)	1104, 1142, 1254, 1302, 1423, 1689
AhlI	ACTAGT	2 cut(s)	1034, 1367
AjnI	CCWGG	4 cut(s)	533, 1474, 1521, 1878
AluBI	AGCT	6 cut(s)	227, 288, 813, 1286, 1307, 1847
AluI	AGCT	6 cut(s)	227, 288, 813, 1286, 1307, 1847
Alw21I	GWGCWC	1 cut(s)	1045
Alw26I	GTCTC	3 cut(s)	2, 1404, 1493
AlwI	GGATC	6 cut(s)	239, 252, 788, 1615, 1645, 1870
AlwNI	CAGNNNCTG	1 cut(s)	662
Ama87I	CYCGRG	3 cut(s)	1044, 1796, 1812
AoxI	GGCC	4 cut(s)	498, 884, 1591, 1893
ApeKI	GCWGC	6 cut(s)	356, 407, 410, 1156, 1507, 1718
ApoI	RAATTY	1 cut(s)	1266
AseI	ATTAAT	1 cut(s)	950
Asp700I	GAANNNNTTC	1 cut(s)	1146
Asp718I	GGTACC	2 cut(s)	21, 1010
AspLEI	GCGC	1 cut(s)	81
AspS9I	GGNCC	4 cut(s)	37, 531, 885, 1894
AsuC2I	CCSGG	5 cut(s)	255, 467, 502, 1813, 1814
AsuHPI	GGTGA	4 cut(s)	244, 1104, 1741, 1829
AsuII	TTCGAA	1 cut(s)	395
AsuNHI	GCTAGC	1 cut(s)	470
AvaI	CYCGRG	3 cut(s)	1044, 1796, 1812
AvaII	GGWCC	2 cut(s)	37, 531
BaeGI	GKGCMC	1 cut(s)	155
BaeI	ACNNNNGTAYC	6 cut(s)	699, 699, 732, 732, 828, 861
BamHI	GGATCC	1 cut(s)	244
BanI	GGYRCC	2 cut(s)	21, 1010
BanII	GRGCYC	1 cut(s)	348
BarI	GAAGNNNNNNTAC	2 cut(s)	837, 869
BbsI	GAAGAC	1 cut(s)	1638
Bbv12I	GWGCWC	1 cut(s)	1045
BbvI	GCAGC	6 cut(s)	343, 394, 397, 1143, 1494, 1730
BccI	CCATC	6 cut(s)	518, 754, 1222, 1427, 1612, 1622
BceAI	ACGGC	3 cut(s)	67, 1217, 1483
BciT130I	CCWGG	4 cut(s)	535, 1476, 1523, 1880
BciVI	GTATCC	1 cut(s)	862
BclI	TGATCA	3 cut(s)	198, 1089, 1543
BcnI	CCSGG	5 cut(s)	255, 467, 502, 1813, 1814
BcoDI	GTCTC	3 cut(s)	2, 1404, 1493
BcuI	ACTAGT	2 cut(s)	1034, 1367
BfaI	CTAG	4 cut(s)	471, 810, 1035, 1368
BfmI	CTRYAG	1 cut(s)	789
BfuAI	ACCTGC	1 cut(s)	1712
BfuI	GTATCC	1 cut(s)	862
BglI	GCCNNNNNGGC	1 cut(s)	1572
BglII	AGATCT	2 cut(s)	850, 1360
BisI	GCNGC	8 cut(s)	357, 408, 411, 1157, 1508, 1567, 1591, 1719
BlsI	GCNGC	8 cut(s)	358, 409, 412, 1158, 1509, 1568, 1592, 1720
BmcAI	AGTACT	1 cut(s)	963
Bme1390I	CCNGG	9 cut(s)	255, 467, 502, 535, 1476, 1523, 1813, 1814, 1880
Bme18I	GGWCC	2 cut(s)	37, 531
BmeT110I	CYCGRG	3 cut(s)	1044, 1796, 1812
BmgT120I	GGNCC	4 cut(s)	37, 531, 885, 1894
BmiI	GGNNCC	7 cut(s)	23, 38, 246, 345, 1012, 1406, 1896
BmrFI	CCNGG	9 cut(s)	255, 467, 502, 535, 1476, 1523, 1813, 1814, 1880
BmsI	GCATC	5 cut(s)	355, 553, 1318, 1369, 1689
BmtI	GCTAGC	1 cut(s)	474
BpiI	GAAGAC	1 cut(s)	1638
BpmI	CTGGAG	1 cut(s)	435
Bpu10I	CCTNAGC	1 cut(s)	228
Bpu14I	TTCGAA	1 cut(s)	395
BpuEI	CTTGAG	1 cut(s)	1715
BpuMI	CCSGG	5 cut(s)	255, 467, 502, 1813, 1814
BsaBI	GATNNNNATC	1 cut(s)	1606
BsaI	GGTCTC	1 cut(s)	1493
BsaJI	CCNNGG	7 cut(s)	254, 1065, 1131, 1474, 1521, 1812, 1813
BsaWI	WCCGGW	2 cut(s)	718, 1114
BsaXI	ACNNNNNCTCC	4 cut(s)	335, 365, 810, 840
Bsc4I	CCNNNNNNNGG	3 cut(s)	160, 254, 1454
Bse1I	ACTGG	3 cut(s)	475, 1489, 1713
Bse3DI	GCAATG	2 cut(s)	597, 1788
Bse8I	GATNNNNATC	1 cut(s)	1606
BseBI	CCWGG	4 cut(s)	535, 1476, 1523, 1880
BseDI	CCNNGG	7 cut(s)	254, 1065, 1131, 1474, 1521, 1812, 1813
BseGI	GGATG	5 cut(s)	370, 1075, 1123, 1290, 1655
BseJI	GATNNNNATC	1 cut(s)	1606
BseLI	CCNNNNNNNGG	3 cut(s)	160, 254, 1454
BseMI	GCAATG	2 cut(s)	597, 1788
BseMII	CTCAG	2 cut(s)	512, 933
BseNI	ACTGG	3 cut(s)	475, 1489, 1713
BseRI	GAGGAG	2 cut(s)	320, 538
BseSI	GKGCMC	1 cut(s)	155
BseXI	GCAGC	6 cut(s)	343, 394, 397, 1143, 1494, 1730
BsgI	GTGCAG	3 cut(s)	342, 669, 1737
Bsh1236I	CGCG	2 cut(s)	81, 937
BshFI	GGCC	4 cut(s)	500, 886, 1593, 1895
BshNI	GGYRCC	2 cut(s)	21, 1010
BsiHKAI	GWGCWC	1 cut(s)	1045
BsiHKCI	CYCGRG	3 cut(s)	1044, 1796, 1812
BsiSI	CCGG	6 cut(s)	254, 467, 501, 719, 1115, 1813
BslFI	GGGAC	3 cut(s)	50, 449, 1502
BslI	CCNNNNNNNGG	3 cut(s)	160, 254, 1454
BsmAI	GTCTC	3 cut(s)	2, 1404, 1493
BsmBI	CGTCTC	2 cut(s)	2, 1404
BsmFI	GGGAC	3 cut(s)	50, 449, 1502
BsmI	GAATGC	4 cut(s)	382, 403, 580, 883
BsnI	GGCC	4 cut(s)	500, 886, 1593, 1895
Bso31I	GGTCTC	1 cut(s)	1493
BsoBI	CYCGRG	3 cut(s)	1044, 1796, 1812
Bsp119I	TTCGAA	1 cut(s)	395
Bsp1286I	GDGCHC	3 cut(s)	155, 348, 1045
Bsp1407I	TGTACA	1 cut(s)	138
Bsp19I	CCATGG	1 cut(s)	1131
BspACI	CCGC	8 cut(s)	54, 105, 117, 866, 935, 1567, 1590, 1858
BspANI	GGCC	4 cut(s)	500, 886, 1593, 1895
BspCNI	CTCAG	2 cut(s)	513, 934
BspFNI	CGCG	2 cut(s)	81, 937
BspLI	GGNNCC	7 cut(s)	23, 38, 246, 345, 1012, 1406, 1896
BspMAI	CTGCAG	1 cut(s)	793
BspMI	ACCTGC	1 cut(s)	1712
BspOI	GCTAGC	1 cut(s)	474
BspPI	GGATC	6 cut(s)	239, 252, 788, 1615, 1645, 1870
BspQI	GCTCTTC	1 cut(s)	909
BspT104I	TTCGAA	1 cut(s)	395
BspT107I	GGYRCC	2 cut(s)	21, 1010
BspTNI	GGTCTC	1 cut(s)	1493
BsrDI	GCAATG	2 cut(s)	597, 1788
BsrGI	TGTACA	1 cut(s)	138
BsrI	ACTGG	3 cut(s)	475, 1489, 1713
BssECI	CCNNGG	7 cut(s)	254, 1065, 1131, 1474, 1521, 1812, 1813
BssT1I	CCWWGG	2 cut(s)	1065, 1131
Bst2UI	CCWGG	4 cut(s)	535, 1476, 1523, 1880
Bst4CI	ACNGT	4 cut(s)	26, 715, 1076, 1096
Bst6I	CTCTTC	7 cut(s)	11, 68, 179, 441, 687, 909, 1268
BstAPI	GCANNNNNTGC	5 cut(s)	365, 563, 653, 662, 1754
BstAUI	TGTACA	1 cut(s)	138
BstBI	TTCGAA	1 cut(s)	395
BstC8I	GCNNGC	2 cut(s)	472, 1577
BstDEI	CTNAG	4 cut(s)	228, 521, 942, 1400
BstDSI	CCRYGG	1 cut(s)	1131
BstF5I	GGATG	5 cut(s)	370, 1075, 1123, 1290, 1655
BstFNI	CGCG	2 cut(s)	81, 937
BstHHI	GCGC	1 cut(s)	81
BstMAI	GTCTC	3 cut(s)	2, 1404, 1493
BstMWI	GCNNNNNNNGC	9 cut(s)	365, 407, 563, 653, 662, 1504, 1572, 1718, 1754
BstNI	CCWGG	4 cut(s)	535, 1476, 1523, 1880
BstNSI	RCATGY	2 cut(s)	845, 1579
BstSCI	CCNGG	9 cut(s)	253, 465, 500, 533, 1474, 1521, 1811, 1812, 1878
BstSFI	CTRYAG	1 cut(s)	789
BstSLI	GKGCMC	1 cut(s)	155
BstUI	CGCG	2 cut(s)	81, 937
BstV1I	GCAGC	6 cut(s)	343, 394, 397, 1143, 1494, 1730
BstV2I	GAAGAC	1 cut(s)	1638
BstX2I	RGATCY	5 cut(s)	244, 793, 850, 1360, 1607
BstYI	RGATCY	5 cut(s)	244, 793, 850, 1360, 1607
BsuI	GTATCC	1 cut(s)	862
BsuRI	GGCC	4 cut(s)	500, 886, 1593, 1895
BtgI	CCRYGG	1 cut(s)	1131
BtgZI	GCGATG	1 cut(s)	138
BtsCI	GGATG	5 cut(s)	370, 1075, 1123, 1290, 1655
BtsI	GCAGTG	2 cut(s)	552, 642
BtsIMutI	CAGTG	8 cut(s)	482, 552, 642, 931, 1092, 1482, 1647, 1720
BveI	ACCTGC	1 cut(s)	1712
Cac8I	GCNNGC	2 cut(s)	472, 1577
CaiI	CAGNNNCTG	1 cut(s)	662
CfoI	GCGC	1 cut(s)	81
Cfr13I	GGNCC	4 cut(s)	37, 531, 885, 1894
Cfr9I	CCCGGG	1 cut(s)	1812
CseI	GACGC	1 cut(s)	586
Csp6I	GTAC	6 cut(s)	22, 139, 716, 845, 962, 1011
CviAII	CATG	6 cut(s)	842, 882, 1087, 1132, 1262, 1576
CviQI	GTAC	6 cut(s)	22, 139, 716, 845, 962, 1011
DdeI	CTNAG	4 cut(s)	228, 521, 942, 1400
DraI	TTTAAA	1 cut(s)	376
Eam1104I	CTCTTC	7 cut(s)	11, 68, 179, 441, 687, 909, 1268
EarI	CTCTTC	7 cut(s)	11, 68, 179, 441, 687, 909, 1268
EciI	GGCGGA	1 cut(s)	132
Eco130I	CCWWGG	2 cut(s)	1065, 1131
Eco24I	GRGCYC	1 cut(s)	348
Eco31I	GGTCTC	1 cut(s)	1493
Eco32I	GATATC	1 cut(s)	1773
Eco47I	GGWCC	2 cut(s)	37, 531
Eco57I	CTGAAG	2 cut(s)	839, 1145
Eco88I	CYCGRG	3 cut(s)	1044, 1796, 1812
EcoRII	CCWGG	4 cut(s)	533, 1474, 1521, 1878
EcoRV	GATATC	1 cut(s)	1773
EcoT14I	CCWWGG	2 cut(s)	1065, 1131
EcoT22I	ATGCAT	1 cut(s)	883
EcoT38I	GRGCYC	1 cut(s)	348
ErhI	CCWWGG	2 cut(s)	1065, 1131
Esp3I	CGTCTC	2 cut(s)	2, 1404
FaeI	CATG	6 cut(s)	845, 885, 1090, 1135, 1265, 1579
FaqI	GGGAC	3 cut(s)	50, 449, 1502
FatI	CATG	6 cut(s)	841, 881, 1086, 1131, 1261, 1575
FauI	CCCGC	1 cut(s)	47
FbaI	TGATCA	3 cut(s)	198, 1089, 1543
FblI	GTMKAC	1 cut(s)	506
Fnu4HI	GCNGC	8 cut(s)	357, 408, 411, 1157, 1508, 1567, 1591, 1719
FokI	GGATG	5 cut(s)	377, 1082, 1130, 1277, 1642
FriOI	GRGCYC	1 cut(s)	348
Fsp4HI	GCNGC	8 cut(s)	357, 408, 411, 1157, 1508, 1567, 1591, 1719
FspBI	CTAG	4 cut(s)	471, 810, 1035, 1368
GlaI	GCGC	1 cut(s)	80
GluI	GCNGC	8 cut(s)	357, 408, 411, 1157, 1508, 1567, 1591, 1719
GsuI	CTGGAG	1 cut(s)	435
HaeIII	GGCC	4 cut(s)	500, 886, 1593, 1895
HapII	CCGG	6 cut(s)	254, 467, 501, 719, 1115, 1813
HgaI	GACGC	1 cut(s)	586
HhaI	GCGC	1 cut(s)	81
Hin1II	CATG	6 cut(s)	845, 885, 1090, 1135, 1265, 1579
Hin6I	GCGC	1 cut(s)	79
HinP1I	GCGC	1 cut(s)	79
HincII	GTYRAC	2 cut(s)	507, 1186
HindII	GTYRAC	2 cut(s)	507, 1186
HinfI	GANTC	8 cut(s)	67, 145, 419, 626, 1109, 1463, 1792, 1799
HpaII	CCGG	6 cut(s)	254, 467, 501, 719, 1115, 1813
HphI	GGTGA	4 cut(s)	244, 1104, 1741, 1829
Hpy166II	GTNNAC	3 cut(s)	139, 507, 1186
Hpy188III	TCNNGA	4 cut(s)	514, 704, 1776, 1796
Hpy8I	GTNNAC	3 cut(s)	139, 507, 1186
Hpy99I	CGWCG	2 cut(s)	53, 580
HpyAV	CCTTC	8 cut(s)	229, 295, 426, 490, 816, 981, 1521, 1695
HpyCH4III	ACNGT	4 cut(s)	26, 715, 1076, 1096
HpyCH4IV	ACGT	1 cut(s)	1191
HpyF10VI	GCNNNNNNNGC	9 cut(s)	365, 407, 563, 653, 662, 1504, 1572, 1718, 1754
HpyF3I	CTNAG	4 cut(s)	228, 521, 942, 1400
HpySE526I	ACGT	1 cut(s)	1191
Hsp92II	CATG	6 cut(s)	845, 885, 1090, 1135, 1265, 1579
HspAI	GCGC	1 cut(s)	79
KpnI	GGTACC	2 cut(s)	25, 1014
Ksp22I	TGATCA	3 cut(s)	198, 1089, 1543
LguI	GCTCTTC	1 cut(s)	909
LmnI	GCTCC	6 cut(s)	57, 343, 525, 1410, 1534, 1778
Lsp1109I	GCAGC	6 cut(s)	343, 394, 397, 1143, 1494, 1730
LweI	GCATC	5 cut(s)	355, 553, 1318, 1369, 1689
MaeI	CTAG	4 cut(s)	471, 810, 1035, 1368
MaeII	ACGT	1 cut(s)	1191
MaeIII	GTNAC	3 cut(s)	550, 1096, 1110
MflI	RGATCY	5 cut(s)	244, 793, 850, 1360, 1607
MhlI	GDGCHC	3 cut(s)	155, 348, 1045
MluCI	AATT	7 cut(s)	202, 741, 759, 947, 951, 1254, 1266
MlyI	GAGTC	3 cut(s)	1118, 1457, 1808
Mph1103I	ATGCAT	1 cut(s)	883
MroXI	GAANNNNTTC	1 cut(s)	1146
MseI	TTAA	5 cut(s)	375, 546, 950, 1017, 1900
MslI	CAYNNNNRTG	1 cut(s)	585
MspA1I	CMGCKG	2 cut(s)	1590, 1847
MspI	CCGG	6 cut(s)	254, 467, 501, 719, 1115, 1813
MspR9I	CCNGG	9 cut(s)	255, 467, 502, 535, 1476, 1523, 1813, 1814, 1880
Mva1269I	GAATGC	4 cut(s)	382, 403, 580, 883
MvaI	CCWGG	4 cut(s)	535, 1476, 1523, 1880
MvnI	CGCG	2 cut(s)	81, 937
MwoI	GCNNNNNNNGC	9 cut(s)	365, 407, 563, 653, 662, 1504, 1572, 1718, 1754
NciI	CCSGG	5 cut(s)	255, 467, 502, 1813, 1814
NcoI	CCATGG	1 cut(s)	1131
NheI	GCTAGC	1 cut(s)	470
NlaIII	CATG	6 cut(s)	845, 885, 1090, 1135, 1265, 1579
NlaIV	GGNNCC	7 cut(s)	23, 38, 246, 345, 1012, 1406, 1896
NmuCI	GTSAC	2 cut(s)	550, 1110
NsiI	ATGCAT	1 cut(s)	883
NspI	RCATGY	2 cut(s)	845, 1579
NspV	TTCGAA	1 cut(s)	395
PaeI	GCATGC	1 cut(s)	1579
PaeR7I	CTCGAG	1 cut(s)	1044
PciI	ACATGT	1 cut(s)	841
PciSI	GCTCTTC	1 cut(s)	909
PcsI	WCGNNNNNNNCGW	1 cut(s)	392
PctI	GAATGC	4 cut(s)	382, 403, 580, 883
PdmI	GAANNNNTTC	1 cut(s)	1146
PfeI	GAWTC	5 cut(s)	67, 145, 419, 626, 1792
PkrI	GCNGC	8 cut(s)	358, 409, 412, 1158, 1509, 1568, 1592, 1720
PleI	GAGTC	3 cut(s)	1117, 1457, 1807
PpsI	GAGTC	3 cut(s)	1117, 1457, 1807
PscI	ACATGT	1 cut(s)	841
PshBI	ATTAAT	1 cut(s)	950
PsiI	TTATAA	1 cut(s)	1889
Psp1406I	AACGTT	1 cut(s)	1191
Psp6I	CCWGG	4 cut(s)	533, 1474, 1521, 1878
PspGI	CCWGG	4 cut(s)	533, 1474, 1521, 1878
PspN4I	GGNNCC	7 cut(s)	23, 38, 246, 345, 1012, 1406, 1896
PspPI	GGNCC	4 cut(s)	37, 531, 885, 1894
PspXI	VCTCGAGB	1 cut(s)	1044
PstI	CTGCAG	1 cut(s)	793
PstNI	CAGNNNCTG	1 cut(s)	662
PsuI	RGATCY	5 cut(s)	244, 793, 850, 1360, 1607
PvuII	CAGCTG	1 cut(s)	1847
RsaI	GTAC	6 cut(s)	23, 140, 717, 846, 963, 1012
RsaNI	GTAC	6 cut(s)	22, 139, 716, 845, 962, 1011
RseI	CAYNNNNRTG	1 cut(s)	585
SalI	GTCGAC	1 cut(s)	505
SapI	GCTCTTC	1 cut(s)	909
SaqAI	TTAA	5 cut(s)	375, 546, 950, 1017, 1900
SatI	GCNGC	8 cut(s)	357, 408, 411, 1157, 1508, 1567, 1591, 1719
Sau96I	GGNCC	4 cut(s)	37, 531, 885, 1894
ScaI	AGTACT	1 cut(s)	963
SchI	GAGTC	3 cut(s)	1118, 1457, 1808
ScrFI	CCNGG	9 cut(s)	255, 467, 502, 535, 1476, 1523, 1813, 1814, 1880
SduI	GDGCHC	3 cut(s)	155, 348, 1045
SfaNI	GCATC	5 cut(s)	355, 553, 1318, 1369, 1689
SfcI	CTRYAG	1 cut(s)	789
Sfr274I	CTCGAG	1 cut(s)	1044
SfuI	TTCGAA	1 cut(s)	395
SinI	GGWCC	2 cut(s)	37, 531
SlaI	CTCGAG	1 cut(s)	1044
SmaI	CCCGGG	1 cut(s)	1814
SmiMI	CAYNNNNRTG	1 cut(s)	585
SmlI	CTYRAG	2 cut(s)	1044, 1694
SmoI	CTYRAG	2 cut(s)	1044, 1694
SpeI	ACTAGT	2 cut(s)	1034, 1367
SphI	GCATGC	1 cut(s)	1579
Sse9I	AATT	7 cut(s)	202, 741, 759, 947, 951, 1254, 1266
SsiI	CCGC	8 cut(s)	54, 105, 117, 866, 935, 1567, 1590, 1858
SspI	AATATT	1 cut(s)	1753
SspMI	CTAG	4 cut(s)	471, 810, 1035, 1368
StyD4I	CCNGG	9 cut(s)	253, 465, 500, 533, 1474, 1521, 1811, 1812, 1878
StyI	CCWWGG	2 cut(s)	1065, 1131
TaaI	ACNGT	4 cut(s)	26, 715, 1076, 1096
TaiI	ACGT	1 cut(s)	1194
TaqI	TCGA	4 cut(s)	206, 395, 506, 1045
TaqII	GACCGA	1 cut(s)	54
TasI	AATT	7 cut(s)	202, 741, 759, 947, 951, 1254, 1266
TatI	WGTACW	2 cut(s)	138, 961
TauI	GCSGC	2 cut(s)	1569, 1593
TfiI	GAWTC	5 cut(s)	67, 145, 419, 626, 1792
Tru1I	TTAA	5 cut(s)	375, 546, 950, 1017, 1900
Tru9I	TTAA	5 cut(s)	375, 546, 950, 1017, 1900
TscAI	CASTG	8 cut(s)	482, 559, 642, 931, 1099, 1489, 1647, 1720
TseFI	GTSAC	2 cut(s)	550, 1110
TseI	GCWGC	6 cut(s)	356, 407, 410, 1156, 1507, 1718
Tsp45I	GTSAC	2 cut(s)	550, 1110
TspDTI	ATGAA	6 cut(s)	885, 1278, 1353, 1430, 1638, 1644
TspGWI	ACGGA	3 cut(s)	237, 1283, 1650
TspMI	CCCGGG	1 cut(s)	1812
TspRI	CASTG	8 cut(s)	482, 559, 642, 931, 1099, 1489, 1647, 1720
VpaK11BI	GGWCC	2 cut(s)	37, 531
VspI	ATTAAT	1 cut(s)	950
XapI	RAATTY	1 cut(s)	1266
XceI	RCATGY	2 cut(s)	845, 1579
XhoI	CTCGAG	1 cut(s)	1044
XmaI	CCCGGG	1 cut(s)	1812
XmiI	GTMKAC	1 cut(s)	506
XmnI	GAANNNNTTC	1 cut(s)	1146
XspI	CTAG	4 cut(s)	471, 810, 1035, 1368
ZrmI	AGTACT	1 cut(s)	963
Zsp2I	ATGCAT	1 cut(s)	883

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.