Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0006644

Physical Location & Seq

Genomic Coordinates Reverse (-)

41547768 .. 41552070

Gene Structure 4303 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1281400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1881 bp

ATGGGGGAGACGGGTAAGCGGTATCGGTCGCAGAGAGACCACGATGGGGGAAACAAGAACCAAAAGAGACGATTCAATGACCGAGACGAAAAGGGTAGTGATGAATTGGTGGTTTATAGGATTCTATGCCCTGATGGGGTTATTGGGAGTGTTATTGGCAAGAGTGGGAAAGTGATCAACTTGATCCGGCAAGATACTAGAGCGAAAATCAAGGTTGTGGATCCGTTTCCGGGTGCGAAAGATAGGGTTATAACTATTTATAGCTATGTTAAGGATAAGGAAGAGGTTGAGGTTGATGATGAGTTCAGTGATAGGGAACCTTTGTGTGCTGCCCAGGATGCTCTTCTCAGAGTTCATTCTGCGATTTCAAATGCATTGGCTAGTGTTGGGGATTCGGATAAGAGACGGAGGGATAGTAGGGAAGACTGCCAAATTCTTGTTCCTTCTAGCCAGTCTGCAAATATTATTGGAAAGGCGGGGTCGACTATAAAGAAACTGAGGAGCAAGACGAGGACCAACATCAAGGTTGTTGCAAAAGATGCCACTGACCCAACACATTCGTGCGCTATGGACTTTGACAATTTTCTTATGATAAATGGAGAATCAGAAGCAGTTAAAAGAGCATTATTTGCAGTTTCTGCAATTATGTACAAGTTTGCTCCGAAGGAAGAGATTTCTCTTGAGACATCAGTACCAATGGCCCCACCAAGTATTATTATCCCATCAGATGTCCCTATTTATCAACCAGGTGGACTATATCAAAGTGGAGATCCTATTGTCTCTTCTAGATCTGTACCTCCAATCATAGGTGCTACACATTTACAGGATCTTCAGGGTTACACGGATACAGGGAATACATGGCCCCTGTATTCATCTGCCCTTCCTTTAGTTTCTGGTTTTGGCGTTGCCTCCCGATCTGAGGAGTTAATTGTGCGAGTACTGTGTCCCTTTGACAAGATTGGTCGCGTAATTGGCAAAGGTGGGGGCACCATTAAAAGCATAAGGCAGGGGAGTGGTGCTCGTATTGAGGTTGATGATACCAAGGACCGTGATGAGTGTATAATTAGTGTTACTGCAACAGAGTCACCCGATGATCTAAAATCTATGGCAGTGGAAGCTGTTCTTTTGCTGCAAGGGAAGATAAATGATGAAGATGATGACTCTGTCTCCATTCGACTTCTTGTTCCATCTAAAGTTATTGGTTGCATTATTGGAAAAAGTGGTTCCATTATAAATGAAATCCGAAAGAGAACAAAAGCTGACGTCCGTATTTCAAAAGTTGATAAGCCTAGGGGTGCTGATGCTAATGATGAACTTGTTGGGGTGGCAGGAGATCCCAGTAGTTTGAGGGATGCGCTTATTCAGATTGTTCTAAGACTCCGAGATGATGTCTTGAAAGATAGAGATGATGGTCTTAACACCTCTGGTGGTGCTGAATCTCTGTACTCGGGTGGCACTGGTCTCTCGATGCCACCTGTCCTGCCTTCTGTCCCCCCAGTTACTTCGATGGGTTATGATCAGAGGGCTGAAAGTGGAAGTGGCTTGGGCCTGCTTTCTTCTGGTAGCCTCTATGGATATGGATCTGTGTCGATGGGAGAAAATGGCTATGGATCCATGTCTTCGTATCCATCCAAGCTATATGGAGGGTCAGCGTTGCCACCCCCTTCAACACTTGAGATGCTAGTTCCTGCGAATGCAGTGGGTAAAGTGATGGGCAAAGGCGGGGCAAATATAGCCAATATTCGGAAGATATCGGGAGCAATGGTAGAGATCTCTGAGTCCAAATCTTCCCGGGGTGATCGTGTTGCACATATATCTGGCACACCTGAACAGAAGCGTACAGCTGAGAACTTGATTAAGGCATTTATAATGGCCCCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1

Protein Analysis

627

Amino Acids

66.95

Weight (kDa)

6.98

Isoelectric Point (pI)

43.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KH_1	PF00013	39 - 88	1.7e-11	KH domain
KH_1	PF00013	144 - 212	2.5e-11	KH domain
KH_1	PF00013	311 - 361	1.2e-12	KH domain
KH_1	PF00013	391 - 456	4.8e-13	KH domain
KH_1	PF00013	557 - 620	2e-15	KH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006644)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G46190 AT5G46190 AT5G46190 AT5G46190
fragaria_vesca	FvH4_3g05250 FvH4_3g05250 FvH4_3g05250 FvH4_3g05250 FvH4_3g05250
malus_domestica	MD05G1281400.v1.1 MD10G1260300.v1.1
prunus_persica	Prupe.4G083200_v2.0.a1 Prupe.4G083200_v2.0.a1 Prupe.4G083200_v2.0.a1
pyrus_communis	pycom05g26150 pycom10g21620
rosa_chinensis	RchiOBHm_Chr5g0014461
rosa_laevigata	RLG00000032112
rosa_multiflora	Rmu_sc0004194.1_g000002
rosa_roxburghii	Rroxscaffold_1G00062110
rosa_rugosa	Rorug05G0018400
rosa_samantha	Rh5AG113400 Rh5BG110100 Rh5CG121900 Rh5DG109200
rosa_wichuraiana	Rw5G009840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	251, 1232, 1868
AatII	GACGTC	1 cut(s)	1266
AccB1I	GGYRCC	1 cut(s)	986
AccI	GTMKAC	1 cut(s)	482
AccII	CGCG	1 cut(s)	966
AciI	CCGC	3 cut(s)	19, 476, 1722
AclWI	GGATC	9 cut(s)	178, 215, 228, 764, 834, 1328, 1588, 1605, 1618
AcsI	RAATTY	1 cut(s)	432
AcuI	CTGAAG	1 cut(s)	815
AcyI	GRCGYC	1 cut(s)	1263
AfaI	GTAC	6 cut(s)	650, 693, 795, 939, 1445, 1840
AfiI	CCNNNNNNNGG	6 cut(s)	46, 136, 230, 806, 919, 1743
AgsI	TTSAA	5 cut(s)	76, 369, 1275, 1396, 1668
AjnI	CCWGG	2 cut(s)	333, 745
AjuI	GAANNNNNNNTTGG	2 cut(s)	423, 455
AleI	CACNNNNGTG	1 cut(s)	559
AluBI	AGCT	5 cut(s)	264, 1118, 1259, 1636, 1844
AluI	AGCT	5 cut(s)	264, 1118, 1259, 1636, 1844
Alw21I	GWGCWC	1 cut(s)	1021
Alw26I	GTCTC	9 cut(s)	2, 30, 61, 78, 397, 677, 784, 1171, 1466
AlwI	GGATC	9 cut(s)	178, 215, 228, 764, 834, 1328, 1588, 1605, 1618
AlwNI	CAGNNNCTG	1 cut(s)	638
Ama87I	CYCGRG	2 cut(s)	1447, 1791
AoxI	GGCC	4 cut(s)	699, 860, 1546, 1872
ApeKI	GCWGC	2 cut(s)	329, 1129
ApoI	RAATTY	1 cut(s)	432
Asp700I	GAANNNNTTC	1 cut(s)	1119
AspA2I	CCTAGG	1 cut(s)	1289
AspLEI	GCGC	2 cut(s)	566, 1357
AspS9I	GGNCC	6 cut(s)	513, 700, 861, 1045, 1546, 1873
AsuC2I	CCSGG	3 cut(s)	231, 1792, 1793
AsuHPI	GGTGA	2 cut(s)	1077, 1808
AvaI	CYCGRG	2 cut(s)	1447, 1791
AvaII	GGWCC	2 cut(s)	513, 1045
AvrII	CCTAGG	1 cut(s)	1289
BaeGI	GKGCMC	1 cut(s)	989
BaeI	ACNNNNGTAYC	2 cut(s)	675, 708
BamHI	GGATCC	2 cut(s)	220, 1610
BanI	GGYRCC	1 cut(s)	986
BbsI	GAAGAC	2 cut(s)	429, 1611
Bbv12I	GWGCWC	1 cut(s)	1021
BbvI	GCAGC	2 cut(s)	316, 1116
BccI	CCATC	9 cut(s)	38, 128, 730, 1195, 1403, 1501, 1585, 1636, 1705
BciT130I	CCWGG	2 cut(s)	335, 747
BciVI	GTATCC	2 cut(s)	838, 1635
BclI	TGATCA	2 cut(s)	174, 1516
BcnI	CCSGG	3 cut(s)	231, 1792, 1793
BcoDI	GTCTC	9 cut(s)	2, 30, 61, 78, 397, 677, 784, 1171, 1466
BfaI	CTAG	6 cut(s)	198, 381, 447, 786, 1290, 1682
BfuI	GTATCC	2 cut(s)	838, 1635
BglII	AGATCT	2 cut(s)	788, 1770
BisI	GCNGC	2 cut(s)	330, 1130
BlnI	CCTAGG	1 cut(s)	1289
BlsI	GCNGC	2 cut(s)	331, 1131
BmcAI	AGTACT	1 cut(s)	939
Bme1390I	CCNGG	5 cut(s)	231, 335, 747, 1792, 1793
Bme18I	GGWCC	2 cut(s)	513, 1045
BmeT110I	CYCGRG	2 cut(s)	1447, 1791
BmgT120I	GGNCC	6 cut(s)	513, 700, 861, 1045, 1546, 1873
BmiI	GGNNCC	8 cut(s)	222, 318, 702, 863, 988, 1225, 1612, 1875
BmrFI	CCNGG	5 cut(s)	231, 335, 747, 1792, 1793
BmrI	ACTGGG	2 cut(s)	1332, 1490
BmsI	GCATC	6 cut(s)	328, 529, 1291, 1342, 1458, 1668
BmuI	ACTGGG	2 cut(s)	1332, 1490
BpiI	GAAGAC	2 cut(s)	429, 1611
BplI	GAGNNNNNCTC	2 cut(s)	1003, 1035
BpuEI	CTTGAG	2 cut(s)	701, 1694
BpuMI	CCSGG	3 cut(s)	231, 1792, 1793
BsaBI	GATNNNNATC	1 cut(s)	1579
BsaHI	GRCGYC	1 cut(s)	1263
BsaI	GGTCTC	2 cut(s)	30, 1466
BsaJI	CCNNGG	5 cut(s)	333, 1041, 1289, 1791, 1792
BsaXI	ACNNNNNCTCC	6 cut(s)	400, 430, 1151, 1181, 1749, 1779
Bsc4I	CCNNNNNNNGG	6 cut(s)	46, 136, 230, 806, 919, 1743
Bse1I	ACTGG	4 cut(s)	451, 1338, 1462, 1496
Bse3DI	GCAATG	1 cut(s)	1767
Bse8I	GATNNNNATC	1 cut(s)	1579
BseBI	CCWGG	2 cut(s)	335, 747
BseDI	CCNNGG	5 cut(s)	333, 1041, 1289, 1791, 1792
BseGI	GGATG	3 cut(s)	343, 1357, 1628
BseJI	GATNNNNATC	1 cut(s)	1579
BseLI	CCNNNNNNNGG	6 cut(s)	46, 136, 230, 806, 919, 1743
BseMI	GCAATG	1 cut(s)	1767
BseMII	CTCAG	5 cut(s)	361, 488, 909, 1767, 1836
BseNI	ACTGG	4 cut(s)	451, 1338, 1462, 1496
BseRI	GAGGAG	2 cut(s)	514, 935
BseSI	GKGCMC	1 cut(s)	989
BseXI	GCAGC	2 cut(s)	316, 1116
Bsh1236I	CGCG	1 cut(s)	966
Bsh1285I	CGRYCG	1 cut(s)	29
BshFI	GGCC	4 cut(s)	701, 862, 1548, 1874
BshNI	GGYRCC	1 cut(s)	986
BsiEI	CGRYCG	1 cut(s)	29
BsiHKAI	GWGCWC	1 cut(s)	1021
BsiHKCI	CYCGRG	2 cut(s)	1447, 1791
BsiSI	CCGG	3 cut(s)	187, 230, 1792
BslFI	GGGAC	3 cut(s)	716, 930, 1475
BslI	CCNNNNNNNGG	6 cut(s)	46, 136, 230, 806, 919, 1743
BsmAI	GTCTC	9 cut(s)	2, 30, 61, 78, 397, 677, 784, 1171, 1466
BsmBI	CGTCTC	4 cut(s)	2, 61, 78, 397
BsmFI	GGGAC	3 cut(s)	716, 930, 1475
BsmI	GAATGC	1 cut(s)	1699
BsnI	GGCC	4 cut(s)	701, 862, 1548, 1874
Bso31I	GGTCTC	2 cut(s)	30, 1466
BsoBI	CYCGRG	2 cut(s)	1447, 1791
Bsp1286I	GDGCHC	2 cut(s)	989, 1021
Bsp1407I	TGTACA	1 cut(s)	648
BspACI	CCGC	3 cut(s)	19, 476, 1722
BspANI	GGCC	4 cut(s)	701, 862, 1548, 1874
BspCNI	CTCAG	5 cut(s)	360, 489, 910, 1768, 1837
BspFNI	CGCG	1 cut(s)	966
BspLI	GGNNCC	8 cut(s)	222, 318, 702, 863, 988, 1225, 1612, 1875
BspPI	GGATC	9 cut(s)	178, 215, 228, 764, 834, 1328, 1588, 1605, 1618
BspQI	GCTCTTC	1 cut(s)	348
BspT107I	GGYRCC	1 cut(s)	986
BspTNI	GGTCTC	2 cut(s)	30, 1466
BsrDI	GCAATG	1 cut(s)	1767
BsrGI	TGTACA	1 cut(s)	648
BsrI	ACTGG	4 cut(s)	451, 1338, 1462, 1496
BssECI	CCNNGG	5 cut(s)	333, 1041, 1289, 1791, 1792
BssNI	GRCGYC	1 cut(s)	1263
BssT1I	CCWWGG	2 cut(s)	1041, 1289
Bst2UI	CCWGG	2 cut(s)	335, 747
Bst4CI	ACNGT	2 cut(s)	942, 1049
Bst6I	CTCTTC	4 cut(s)	276, 348, 663, 787
BstACI	GRCGYC	1 cut(s)	1263
BstAPI	GCANNNNNTGC	3 cut(s)	539, 629, 638
BstAUI	TGTACA	1 cut(s)	648
BstC8I	GCNNGC	1 cut(s)	1550
BstDEI	CTNAG	6 cut(s)	347, 497, 918, 1373, 1776, 1845
BstF5I	GGATG	3 cut(s)	343, 1357, 1628
BstFNI	CGCG	1 cut(s)	966
BstHHI	GCGC	2 cut(s)	566, 1357
BstMAI	GTCTC	9 cut(s)	2, 30, 61, 78, 397, 677, 784, 1171, 1466
BstMCI	CGRYCG	1 cut(s)	29
BstMWI	GCNNNNNNNGC	7 cut(s)	338, 539, 629, 638, 972, 1115, 1733
BstNI	CCWGG	2 cut(s)	335, 747
BstSCI	CCNGG	5 cut(s)	229, 333, 745, 1790, 1791
BstSLI	GKGCMC	1 cut(s)	989
BstUI	CGCG	1 cut(s)	966
BstV1I	GCAGC	2 cut(s)	316, 1116
BstV2I	GAAGAC	2 cut(s)	429, 1611
BstX2I	RGATCY	8 cut(s)	220, 769, 788, 826, 1333, 1580, 1610, 1770
BstYI	RGATCY	8 cut(s)	220, 769, 788, 826, 1333, 1580, 1610, 1770
BsuI	GTATCC	2 cut(s)	838, 1635
BsuRI	GGCC	4 cut(s)	701, 862, 1548, 1874
BtsCI	GGATG	3 cut(s)	343, 1357, 1628
BtsI	GCAGTG	2 cut(s)	1116, 1704
BtsIMutI	CAGTG	5 cut(s)	313, 543, 1116, 1455, 1704
Cac8I	GCNNGC	1 cut(s)	1550
CaiI	CAGNNNCTG	1 cut(s)	638
CfoI	GCGC	2 cut(s)	566, 1357
Cfr13I	GGNCC	6 cut(s)	513, 700, 861, 1045, 1546, 1873
Cfr9I	CCCGGG	1 cut(s)	1791
CsiI	ACCWGGT	1 cut(s)	745
Csp6I	GTAC	6 cut(s)	649, 692, 794, 938, 1444, 1839
CviAII	CATG	2 cut(s)	858, 1615
CviQI	GTAC	6 cut(s)	649, 692, 794, 938, 1444, 1839
DdeI	CTNAG	6 cut(s)	347, 497, 918, 1373, 1776, 1845
Eam1104I	CTCTTC	4 cut(s)	276, 348, 663, 787
EarI	CTCTTC	4 cut(s)	276, 348, 663, 787
Eco130I	CCWWGG	2 cut(s)	1041, 1289
Eco31I	GGTCTC	2 cut(s)	30, 1466
Eco32I	GATATC	1 cut(s)	1752
Eco47I	GGWCC	2 cut(s)	513, 1045
Eco57I	CTGAAG	1 cut(s)	815
Eco88I	CYCGRG	2 cut(s)	1447, 1791
EcoRII	CCWGG	2 cut(s)	333, 745
EcoRV	GATATC	1 cut(s)	1752
EcoT14I	CCWWGG	2 cut(s)	1041, 1289
EcoT22I	ATGCAT	1 cut(s)	376
ErhI	CCWWGG	2 cut(s)	1041, 1289
Esp3I	CGTCTC	4 cut(s)	2, 61, 78, 397
FaeI	CATG	2 cut(s)	861, 1618
FalI	AAGNNNNNCTT	2 cut(s)	1107, 1139
FaqI	GGGAC	3 cut(s)	716, 930, 1475
FatI	CATG	2 cut(s)	857, 1614
FauI	CCCGC	2 cut(s)	469, 1715
FbaI	TGATCA	2 cut(s)	174, 1516
FblI	GTMKAC	1 cut(s)	482
Fnu4HI	GCNGC	2 cut(s)	330, 1130
FokI	GGATG	3 cut(s)	350, 1364, 1615
Fsp4HI	GCNGC	2 cut(s)	330, 1130
FspBI	CTAG	6 cut(s)	198, 381, 447, 786, 1290, 1682
GlaI	GCGC	2 cut(s)	565, 1356
GluI	GCNGC	2 cut(s)	330, 1130
HaeIII	GGCC	4 cut(s)	701, 862, 1548, 1874
HapII	CCGG	3 cut(s)	187, 230, 1792
HhaI	GCGC	2 cut(s)	566, 1357
Hin1I	GRCGYC	1 cut(s)	1263
Hin1II	CATG	2 cut(s)	861, 1618
Hin6I	GCGC	2 cut(s)	564, 1355
HinP1I	GCGC	2 cut(s)	564, 1355
HincII	GTYRAC	1 cut(s)	483
HindII	GTYRAC	1 cut(s)	483
HinfI	GANTC	9 cut(s)	72, 121, 392, 602, 1082, 1160, 1377, 1436, 1778
HpaII	CCGG	3 cut(s)	187, 230, 1792
HphI	GGTGA	2 cut(s)	1077, 1808
Hpy166II	GTNNAC	2 cut(s)	483, 752
Hpy188III	TCNNGA	6 cut(s)	680, 786, 912, 1393, 1465, 1755
Hpy8I	GTNNAC	2 cut(s)	483, 752
HpyAV	CCTTC	5 cut(s)	453, 658, 890, 1494, 1674
HpyCH4III	ACNGT	2 cut(s)	942, 1049
HpyCH4IV	ACGT	1 cut(s)	1263
HpyF10VI	GCNNNNNNNGC	7 cut(s)	338, 539, 629, 638, 972, 1115, 1733
HpyF3I	CTNAG	6 cut(s)	347, 497, 918, 1373, 1776, 1845
HpySE526I	ACGT	1 cut(s)	1263
Hsp92I	GRCGYC	1 cut(s)	1263
Hsp92II	CATG	2 cut(s)	861, 1618
HspAI	GCGC	2 cut(s)	564, 1355
Ksp22I	TGATCA	2 cut(s)	174, 1516
LguI	GCTCTTC	1 cut(s)	348
LmnI	GCTCC	3 cut(s)	501, 664, 1757
Lsp1109I	GCAGC	2 cut(s)	316, 1116
LweI	GCATC	6 cut(s)	328, 529, 1291, 1342, 1458, 1668
MabI	ACCWGGT	1 cut(s)	745
MaeI	CTAG	6 cut(s)	198, 381, 447, 786, 1290, 1682
MaeII	ACGT	1 cut(s)	1263
MaeIII	GTNAC	4 cut(s)	836, 1069, 1083, 1498
MflI	RGATCY	8 cut(s)	220, 769, 788, 826, 1333, 1580, 1610, 1770
MhlI	GDGCHC	2 cut(s)	989, 1021
MluCI	AATT	7 cut(s)	104, 432, 580, 642, 927, 969, 1062
MlyI	GAGTC	4 cut(s)	1091, 1154, 1371, 1787
Mph1103I	ATGCAT	1 cut(s)	376
MroXI	GAANNNNTTC	1 cut(s)	1119
MseI	TTAA	6 cut(s)	270, 615, 926, 993, 1416, 1857
MslI	CAYNNNNRTG	1 cut(s)	559
MspA1I	CMGCKG	1 cut(s)	1844
MspI	CCGG	3 cut(s)	187, 230, 1792
MspR9I	CCNGG	5 cut(s)	231, 335, 747, 1792, 1793
Mva1269I	GAATGC	1 cut(s)	1699
MvaI	CCWGG	2 cut(s)	335, 747
MvnI	CGCG	1 cut(s)	966
MwoI	GCNNNNNNNGC	7 cut(s)	338, 539, 629, 638, 972, 1115, 1733
NciI	CCSGG	3 cut(s)	231, 1792, 1793
NlaIII	CATG	2 cut(s)	861, 1618
NlaIV	GGNNCC	8 cut(s)	222, 318, 702, 863, 988, 1225, 1612, 1875
NmuCI	GTSAC	1 cut(s)	1083
NsiI	ATGCAT	1 cut(s)	376
OliI	CACNNNNGTG	1 cut(s)	559
PciSI	GCTCTTC	1 cut(s)	348
PctI	GAATGC	1 cut(s)	1699
PdmI	GAANNNNTTC	1 cut(s)	1119
PfeI	GAWTC	5 cut(s)	72, 121, 392, 602, 1436
PflFI	GACNNNGTC	1 cut(s)	1163
PkrI	GCNGC	2 cut(s)	331, 1131
PleI	GAGTC	4 cut(s)	1090, 1154, 1371, 1786
PpsI	GAGTC	4 cut(s)	1090, 1154, 1371, 1786
PsiI	TTATAA	3 cut(s)	251, 1232, 1868
Psp6I	CCWGG	2 cut(s)	333, 745
PspGI	CCWGG	2 cut(s)	333, 745
PspN4I	GGNNCC	8 cut(s)	222, 318, 702, 863, 988, 1225, 1612, 1875
PspPI	GGNCC	6 cut(s)	513, 700, 861, 1045, 1546, 1873
PstNI	CAGNNNCTG	1 cut(s)	638
PsuI	RGATCY	8 cut(s)	220, 769, 788, 826, 1333, 1580, 1610, 1770
PsyI	GACNNNGTC	1 cut(s)	1163
PvuII	CAGCTG	1 cut(s)	1844
RsaI	GTAC	6 cut(s)	650, 693, 795, 939, 1445, 1840
RsaNI	GTAC	6 cut(s)	649, 692, 794, 938, 1444, 1839
RseI	CAYNNNNRTG	1 cut(s)	559
SalI	GTCGAC	1 cut(s)	481
SapI	GCTCTTC	1 cut(s)	348
SaqAI	TTAA	6 cut(s)	270, 615, 926, 993, 1416, 1857
SatI	GCNGC	2 cut(s)	330, 1130
Sau96I	GGNCC	6 cut(s)	513, 700, 861, 1045, 1546, 1873
ScaI	AGTACT	1 cut(s)	939
SchI	GAGTC	4 cut(s)	1091, 1154, 1371, 1787
ScrFI	CCNGG	5 cut(s)	231, 335, 747, 1792, 1793
SduI	GDGCHC	2 cut(s)	989, 1021
SexAI	ACCWGGT	1 cut(s)	745
SfaNI	GCATC	6 cut(s)	328, 529, 1291, 1342, 1458, 1668
SinI	GGWCC	2 cut(s)	513, 1045
SmaI	CCCGGG	1 cut(s)	1793
SmiMI	CAYNNNNRTG	1 cut(s)	559
SmlI	CTYRAG	2 cut(s)	680, 1673
SmoI	CTYRAG	2 cut(s)	680, 1673
Sse9I	AATT	7 cut(s)	104, 432, 580, 642, 927, 969, 1062
SsiI	CCGC	3 cut(s)	19, 476, 1722
SspI	AATATT	2 cut(s)	463, 1741
SspMI	CTAG	6 cut(s)	198, 381, 447, 786, 1290, 1682
StyD4I	CCNGG	5 cut(s)	229, 333, 745, 1790, 1791
StyI	CCWWGG	2 cut(s)	1041, 1289
TaaI	ACNGT	2 cut(s)	942, 1049
TaiI	ACGT	1 cut(s)	1266
TaqI	TCGA	5 cut(s)	482, 1174, 1466, 1505, 1589
TaqII	GACCGA	2 cut(s)	15, 96
TasI	AATT	7 cut(s)	104, 432, 580, 642, 927, 969, 1062
TatI	WGTACW	3 cut(s)	648, 937, 1443
TfiI	GAWTC	5 cut(s)	72, 121, 392, 602, 1436
Tru1I	TTAA	6 cut(s)	270, 615, 926, 993, 1416, 1857
Tru9I	TTAA	6 cut(s)	270, 615, 926, 993, 1416, 1857
TscAI	CASTG	5 cut(s)	313, 550, 1116, 1462, 1704
TseFI	GTSAC	1 cut(s)	1083
TseI	GCWGC	2 cut(s)	329, 1129
Tsp45I	GTSAC	1 cut(s)	1083
TspDTI	ATGAA	6 cut(s)	117, 344, 861, 1164, 1251, 1326
TspGWI	ACGGA	4 cut(s)	213, 421, 857, 1256
TspMI	CCCGGG	1 cut(s)	1791
TspRI	CASTG	5 cut(s)	313, 550, 1116, 1462, 1704
Tth111I	GACNNNGTC	1 cut(s)	1163
VpaK11BI	GGWCC	2 cut(s)	513, 1045
XapI	RAATTY	1 cut(s)	432
XbaI	TCTAGA	1 cut(s)	785
XmaI	CCCGGG	1 cut(s)	1791
XmaJI	CCTAGG	1 cut(s)	1289
XmiI	GTMKAC	1 cut(s)	482
XmnI	GAANNNNTTC	1 cut(s)	1119
XspI	CTAG	6 cut(s)	198, 381, 447, 786, 1290, 1682
ZraI	GACGTC	1 cut(s)	1264
ZrmI	AGTACT	1 cut(s)	939
Zsp2I	ATGCAT	1 cut(s)	376

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.