Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0006644

Physical Location & Seq

Genomic Coordinates Forward (+)

10618305 .. 10624308

Gene Structure 6004 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G009840.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1911 bp

ATGGGAGAGACGGGGAAGCGGTATCGTTCGCAGAGGGACCGAGATTACGATGGCGGGAACAAGAACCAGAAGAGGCGGATGAATGACAGAGAAGATAGGGGCGGTGGCGGTGGCGGTGGAGGCGCTGGCGGTGGCGACGAGGTTGTTGTGTACAGGATTCTATGCCCGGTTGGGGTCATTGGAAGCGTGATTGGGAAGAGTGGTAAAGTGATCAATTCGATTAGACAGGATAGTAGAGCTAAGGTGAAGGTTGTGGATCCATTTCCGGGTGCGAAAGATAGGGTTATAACTATTTACAGCTATGTTAGGGACAAGGAGGAGGTTGATGTTGATGATGAGTTCAGTAGTGATAGGGAGCCCTTGTGTGCTGCACAGGATGCTCTATTTAAAGTGCATTCTGCTATTTCGAATGCGCTGGCTGCTGCTGGAGATTCTGATAAGAGGAGGAGGGATAAGGAAGAGTGTCAGATTCTTGTCCCGGCTAGCCAGTGTGCTAATGTGATAGGTAAGGCCGGGTCGACGATAAAGAAACTGAGGAGCAGGACGAGGACGAATATTAAGGTCACTGCAAAAGATGCCTCCGAACCAACACATTCATGTGCAATGGACTTTGACAACTTTGTTATGATAAATGGAGAATCAGAAGCAGTGAAAAAAGCATTATTTGCAGTTTCTGCAATCATATACAAGTTTCCTGCACGAGAACAGATTCCTCTTGATACAACAGTACCGGAAGCCCCTCCAAGCATAATAATTCCATCGGATATGCCGATTTATCAACCGGGTGGATTATATAACCCTGCAGATCCTATCATTCCTTCTAGATCCCTACCTCTCCTAAATGCTACACATGTACAGGATCTTCATGGTTATGCAGATACAGGGAATGCATGGCCCATATATTCATCTGCTCTTCCTTTAGTTTCTGGTTTCAGTGTGGCATCGCGATCTGAGGAGTTAGTTGTGAGAGTACTATGCCCTTCTGACAAGATTGGTCGTGTCATTGGAAAGGGTGGGGGTACCATTAAAAGCATAAGGCAGACTAGTGGTGCTCGAGTTGAGGTTGACGATACCAAGGATGACCGTGATGAGTGCATAATCACTGTTACTTCAACAGAGTCACCGGATGATCTGAAGTCCATGGCAGTTGAAGCTGTTCTATTGTTGCAAGGGAAGATAAATGATGAAGATGTTGACAATGTTTCTATACGGCTTCTTGTTCCGTCTAAAGTTATTGGTTGTATTATTGGAAAAAATGGTTCAATTATAAATGAAATACGGAAGAGAACAAAAGCTGACATCCGTATTTCTAAAGCTGATAAGCCTAAATGTGCTGACGCTAATGATGAACTTGTTGAGGTGGCAGGAGATCTCAGTAGTTTGAGAGATGCACTTATTCAGATTGTTCTAAGGCTCCGAGACGATGTCTTGAAAGATAGAGATGGTGGTCATAACCCTGCTGTTGGTGCGGAGTCGGTATACCCGGGTAGCACTGGTCTCCCTTTGCCATCTGTGCTGCCTTCAGTTCCCCAGGTTGCTCCCTTAGGTTATGATCAGAGGGCTGAAAGTGCAAGTGGCTTGGGGATGCTTTCTTCTAGTGGCCTGTTTGGATATGGATCTCTGCCGATGGGGGAAGATGGCTACGGATCAGTGTCTTCATATTCATCCAAGCTATATGGAGGATTGCCACCCCCTTCAACACTTGAGATGCTCATTCCTGCTAATGCAGCGGGTAAGGTGATTGGCAAAGGAGGAGCAAATATAGCTAACATTCGGAAGATATCAGGAGCAATGATAGAGATTTCCGAGTCCAAATCTTCACGGGGTGATCGTATTGCTCATATATCTGGCACAGTTGAACAGAAGCGGACAGCAGAGAACTTGATCCAGGCATTTATAATGGCCATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1

Protein Analysis

636

Amino Acids

67.76

Weight (kDa)

6.65

Isoelectric Point (pI)

42.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KH_1	PF00013	51 - 100	3.2e-11	KH domain
KH_1	PF00013	155 - 224	1.5e-12	KH domain
KH_1	PF00013	322 - 373	1.3e-14	KH domain
KH_1	PF00013	403 - 468	2.7e-14	KH domain
KH_1	PF00013	567 - 630	1.9e-15	KH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006644)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G46190 AT5G46190 AT5G46190 AT5G46190
fragaria_vesca	FvH4_3g05250 FvH4_3g05250 FvH4_3g05250 FvH4_3g05250 FvH4_3g05250
malus_domestica	MD05G1281400.v1.1 MD10G1260300.v1.1
prunus_persica	Prupe.4G083200_v2.0.a1 Prupe.4G083200_v2.0.a1 Prupe.4G083200_v2.0.a1
pyrus_communis	pycom05g26150 pycom10g21620
rosa_chinensis	RchiOBHm_Chr5g0014461
rosa_laevigata	RLG00000032112
rosa_multiflora	Rmu_sc0004194.1_g000002
rosa_roxburghii	Rroxscaffold_1G00062110
rosa_rugosa	Rorug05G0018400
rosa_samantha	Rh5AG113400 Rh5BG110100 Rh5CG121900 Rh5DG109200
rosa_wichuraiana	Rw5G009840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	287, 1268, 1898
Acc65I	GGTACC	1 cut(s)	1019
AccB1I	GGYRCC	1 cut(s)	1019
AccI	GTMKAC	2 cut(s)	518, 1479
AccII	CGCG	1 cut(s)	946
AclWI	GGATC	8 cut(s)	251, 264, 800, 819, 867, 1624, 1654, 1879
AcoI	YGGCCR	1 cut(s)	1902
AcuI	CTGAAG	2 cut(s)	1154, 1506
AdeI	CACNNNGTG	1 cut(s)	1826
AfaI	GTAC	5 cut(s)	152, 729, 855, 972, 1021
AfiI	CCNNNNNNNGG	3 cut(s)	172, 266, 1463
AflIII	ACRYGT	1 cut(s)	850
AgsI	TTSAA	6 cut(s)	1113, 1151, 1263, 1432, 1698, 1859
AhlI	ACTAGT	1 cut(s)	1043
AjnI	CCWGG	2 cut(s)	1530, 1887
AluBI	AGCT	7 cut(s)	239, 300, 1154, 1295, 1316, 1672, 1766
AluI	AGCT	7 cut(s)	239, 300, 1154, 1295, 1316, 1672, 1766
Alw21I	GWGCWC	1 cut(s)	1054
Alw26I	GTCTC	3 cut(s)	2, 1413, 1502
AlwI	GGATC	8 cut(s)	251, 264, 800, 819, 867, 1624, 1654, 1879
AlwNI	CAGNNNCTG	1 cut(s)	674
Ama87I	CYCGRG	2 cut(s)	1053, 1483
AoxI	GGCC	4 cut(s)	510, 893, 1600, 1902
ApeKI	GCWGC	5 cut(s)	368, 419, 422, 1516, 1727
Asp700I	GAANNNNTTC	2 cut(s)	708, 1155
Asp718I	GGTACC	1 cut(s)	1019
AspLEI	GCGC	2 cut(s)	125, 415
AspS9I	GGNCC	2 cut(s)	37, 894
AsuC2I	CCSGG	7 cut(s)	167, 267, 479, 514, 783, 1484, 1485
AsuHPI	GGTGA	4 cut(s)	256, 1113, 1750, 1838
AsuII	TTCGAA	1 cut(s)	407
AsuNHI	GCTAGC	1 cut(s)	482
AvaI	CYCGRG	2 cut(s)	1053, 1483
AvaII	GGWCC	1 cut(s)	37
AxyI	CCTNAGG	1 cut(s)	1543
BaeI	ACNNNNGTAYC	4 cut(s)	711, 711, 744, 744
BalI	TGGCCA	1 cut(s)	1904
BamHI	GGATCC	1 cut(s)	256
BanI	GGYRCC	1 cut(s)	1019
BanII	GRGCYC	1 cut(s)	360
BarI	GAAGNNNNNNTAC	2 cut(s)	846, 878
BauI	CACGAG	1 cut(s)	699
BbsI	GAAGAC	1 cut(s)	1647
Bbv12I	GWGCWC	1 cut(s)	1054
BbvI	GCAGC	5 cut(s)	355, 406, 409, 1503, 1739
BccI	CCATC	6 cut(s)	44, 766, 1436, 1516, 1621, 1631
BceAI	ACGGC	1 cut(s)	1226
BciT130I	CCWGG	2 cut(s)	1532, 1889
BclI	TGATCA	2 cut(s)	210, 1552
BcnI	CCSGG	7 cut(s)	167, 267, 479, 514, 783, 1484, 1485
BcoDI	GTCTC	3 cut(s)	2, 1413, 1502
BcuI	ACTAGT	1 cut(s)	1043
BfaI	CTAG	4 cut(s)	483, 822, 1044, 1596
BfmI	CTRYAG	1 cut(s)	801
BfoI	RGCGCY	1 cut(s)	126
BglII	AGATCT	1 cut(s)	1369
BisI	GCNGC	5 cut(s)	369, 420, 423, 1517, 1728
BlsI	GCNGC	5 cut(s)	370, 421, 424, 1518, 1729
BmcAI	AGTACT	1 cut(s)	972
Bme1390I	CCNGG	9 cut(s)	167, 267, 479, 514, 783, 1484, 1485, 1532, 1889
Bme18I	GGWCC	1 cut(s)	37
BmeT110I	CYCGRG	2 cut(s)	1053, 1483
BmgT120I	GGNCC	2 cut(s)	37, 894
BmiI	GGNNCC	5 cut(s)	38, 258, 357, 1021, 1415
BmrFI	CCNGG	9 cut(s)	167, 267, 479, 514, 783, 1484, 1485, 1532, 1889
BmsI	GCATC	6 cut(s)	367, 565, 950, 1378, 1575, 1698
BmtI	GCTAGC	1 cut(s)	486
BpiI	GAAGAC	1 cut(s)	1647
BpmI	CTGGAG	1 cut(s)	447
Bpu10I	CCTNAGC	1 cut(s)	240
Bpu14I	TTCGAA	1 cut(s)	407
BpuEI	CTTGAG	1 cut(s)	1724
BpuMI	CCSGG	7 cut(s)	167, 267, 479, 514, 783, 1484, 1485
BsaBI	GATNNNNATC	1 cut(s)	1615
BsaI	GGTCTC	1 cut(s)	1502
BsaJI	CCNNGG	4 cut(s)	1074, 1140, 1483, 1530
BsaWI	WCCGGW	2 cut(s)	730, 1123
BsaXI	ACNNNNNCTCC	2 cut(s)	347, 377
Bsc4I	CCNNNNNNNGG	3 cut(s)	172, 266, 1463
Bse1I	ACTGG	2 cut(s)	487, 1498
Bse21I	CCTNAGG	1 cut(s)	1543
Bse3DI	GCAATG	2 cut(s)	609, 1797
Bse8I	GATNNNNATC	1 cut(s)	1615
BseBI	CCWGG	2 cut(s)	1532, 1889
BseDI	CCNNGG	4 cut(s)	1074, 1140, 1483, 1530
BseGI	GGATG	7 cut(s)	84, 382, 1084, 1132, 1299, 1590, 1664
BseJI	GATNNNNATC	1 cut(s)	1615
BseLI	CCNNNNNNNGG	3 cut(s)	172, 266, 1463
BseMI	GCAATG	2 cut(s)	609, 1797
BseMII	CTCAG	3 cut(s)	524, 942, 1387
BseNI	ACTGG	2 cut(s)	487, 1498
BseRI	GAGGAG	6 cut(s)	332, 457, 460, 550, 968, 1767
BseXI	GCAGC	5 cut(s)	355, 406, 409, 1503, 1739
BsgI	GTGCAG	2 cut(s)	354, 681
Bsh1236I	CGCG	1 cut(s)	946
BshFI	GGCC	4 cut(s)	512, 895, 1602, 1904
BshNI	GGYRCC	1 cut(s)	1019
BsiHKAI	GWGCWC	1 cut(s)	1054
BsiHKCI	CYCGRG	2 cut(s)	1053, 1483
BsiSI	CCGG	8 cut(s)	167, 266, 479, 513, 731, 782, 1124, 1484
BslFI	GGGAC	3 cut(s)	50, 323, 461
BslI	CCNNNNNNNGG	3 cut(s)	172, 266, 1463
BsmAI	GTCTC	3 cut(s)	2, 1413, 1502
BsmBI	CGTCTC	2 cut(s)	2, 1413
BsmFI	GGGAC	3 cut(s)	50, 323, 461
BsmI	GAATGC	3 cut(s)	394, 415, 892
BsnI	GGCC	4 cut(s)	512, 895, 1602, 1904
Bso31I	GGTCTC	1 cut(s)	1502
BsoBI	CYCGRG	2 cut(s)	1053, 1483
Bsp119I	TTCGAA	1 cut(s)	407
Bsp1286I	GDGCHC	2 cut(s)	360, 1054
Bsp1407I	TGTACA	2 cut(s)	150, 853
Bsp19I	CCATGG	1 cut(s)	1140
Bsp68I	TCGCGA	1 cut(s)	946
BspANI	GGCC	4 cut(s)	512, 895, 1602, 1904
BspCNI	CTCAG	3 cut(s)	525, 943, 1386
BspFNI	CGCG	1 cut(s)	946
BspLI	GGNNCC	5 cut(s)	38, 258, 357, 1021, 1415
BspMAI	CTGCAG	1 cut(s)	805
BspOI	GCTAGC	1 cut(s)	486
BspPI	GGATC	8 cut(s)	251, 264, 800, 819, 867, 1624, 1654, 1879
BspQI	GCTCTTC	1 cut(s)	918
BspT104I	TTCGAA	1 cut(s)	407
BspT107I	GGYRCC	1 cut(s)	1019
BspTNI	GGTCTC	1 cut(s)	1502
BsrDI	GCAATG	2 cut(s)	609, 1797
BsrGI	TGTACA	2 cut(s)	150, 853
BsrI	ACTGG	2 cut(s)	487, 1498
BssECI	CCNNGG	4 cut(s)	1074, 1140, 1483, 1530
BssNAI	GTATAC	1 cut(s)	1480
BssSI	CACGAG	1 cut(s)	699
BssT1I	CCWWGG	2 cut(s)	1074, 1140
Bst1107I	GTATAC	1 cut(s)	1480
Bst2BI	CACGAG	1 cut(s)	699
Bst2UI	CCWGG	2 cut(s)	1532, 1889
Bst4CI	ACNGT	4 cut(s)	727, 1085, 1105, 1855
Bst6I	CTCTTC	5 cut(s)	65, 191, 453, 918, 1277
BstAPI	GCANNNNNTGC	4 cut(s)	377, 575, 665, 674
BstAUI	TGTACA	2 cut(s)	150, 853
BstBI	TTCGAA	1 cut(s)	407
BstC8I	GCNNGC	3 cut(s)	127, 417, 484
BstDEI	CTNAG	6 cut(s)	240, 533, 951, 1373, 1409, 1543
BstDSI	CCRYGG	1 cut(s)	1140
BstF5I	GGATG	7 cut(s)	84, 382, 1084, 1132, 1299, 1590, 1664
BstFNI	CGCG	1 cut(s)	946
BstH2I	RGCGCY	1 cut(s)	126
BstHHI	GCGC	2 cut(s)	125, 415
BstMAI	GTCTC	3 cut(s)	2, 1413, 1502
BstNI	CCWGG	2 cut(s)	1532, 1889
BstNSI	RCATGY	1 cut(s)	854
BstSCI	CCNGG	9 cut(s)	165, 265, 477, 512, 781, 1482, 1483, 1530, 1887
BstSFI	CTRYAG	1 cut(s)	801
BstUI	CGCG	1 cut(s)	946
BstV1I	GCAGC	5 cut(s)	355, 406, 409, 1503, 1739
BstV2I	GAAGAC	1 cut(s)	1647
BstX2I	RGATCY	6 cut(s)	256, 805, 824, 859, 1369, 1616
BstYI	RGATCY	6 cut(s)	256, 805, 824, 859, 1369, 1616
BstZ17I	GTATAC	1 cut(s)	1480
Bsu36I	CCTNAGG	1 cut(s)	1543
BsuRI	GGCC	4 cut(s)	512, 895, 1602, 1904
BtgI	CCRYGG	1 cut(s)	1140
BtgZI	GCGATG	1 cut(s)	927
BtsCI	GGATG	7 cut(s)	84, 382, 1084, 1132, 1299, 1590, 1664
BtsI	GCAGTG	2 cut(s)	564, 654
BtsIMutI	CAGTG	7 cut(s)	494, 564, 654, 940, 1101, 1491, 1656
BtuMI	TCGCGA	1 cut(s)	946
Cac8I	GCNNGC	3 cut(s)	127, 417, 484
CaiI	CAGNNNCTG	1 cut(s)	674
CfoI	GCGC	2 cut(s)	125, 415
Cfr13I	GGNCC	2 cut(s)	37, 894
Cfr9I	CCCGGG	1 cut(s)	1483
CseI	GACGC	1 cut(s)	1346
Csp6I	GTAC	5 cut(s)	151, 728, 854, 971, 1020
CviAII	CATG	5 cut(s)	597, 851, 866, 891, 1141
CviQI	GTAC	5 cut(s)	151, 728, 854, 971, 1020
DdeI	CTNAG	6 cut(s)	240, 533, 951, 1373, 1409, 1543
DraI	TTTAAA	1 cut(s)	388
DraIII	CACNNNGTG	1 cut(s)	1826
EaeI	YGGCCR	1 cut(s)	1902
Eam1104I	CTCTTC	5 cut(s)	65, 191, 453, 918, 1277
EarI	CTCTTC	5 cut(s)	65, 191, 453, 918, 1277
EciI	GGCGGA	1 cut(s)	91
Eco130I	CCWWGG	2 cut(s)	1074, 1140
Eco24I	GRGCYC	1 cut(s)	360
Eco31I	GGTCTC	1 cut(s)	1502
Eco32I	GATATC	1 cut(s)	1782
Eco47I	GGWCC	1 cut(s)	37
Eco57I	CTGAAG	2 cut(s)	1154, 1506
Eco81I	CCTNAGG	1 cut(s)	1543
Eco88I	CYCGRG	2 cut(s)	1053, 1483
EcoRII	CCWGG	2 cut(s)	1530, 1887
EcoRV	GATATC	1 cut(s)	1782
EcoT14I	CCWWGG	2 cut(s)	1074, 1140
EcoT22I	ATGCAT	1 cut(s)	892
EcoT38I	GRGCYC	1 cut(s)	360
ErhI	CCWWGG	2 cut(s)	1074, 1140
Esp3I	CGTCTC	2 cut(s)	2, 1413
FaeI	CATG	5 cut(s)	600, 854, 869, 894, 1144
FaqI	GGGAC	3 cut(s)	50, 323, 461
FatI	CATG	5 cut(s)	596, 850, 865, 890, 1140
FauI	CCCGC	2 cut(s)	47, 1723
FbaI	TGATCA	2 cut(s)	210, 1552
FblI	GTMKAC	2 cut(s)	518, 1479
Fnu4HI	GCNGC	5 cut(s)	369, 420, 423, 1517, 1728
FokI	GGATG	7 cut(s)	91, 389, 1091, 1139, 1286, 1597, 1651
FriOI	GRGCYC	1 cut(s)	360
Fsp4HI	GCNGC	5 cut(s)	369, 420, 423, 1517, 1728
FspBI	CTAG	4 cut(s)	483, 822, 1044, 1596
GlaI	GCGC	2 cut(s)	124, 414
GluI	GCNGC	5 cut(s)	369, 420, 423, 1517, 1728
GsuI	CTGGAG	1 cut(s)	447
HaeII	RGCGCY	1 cut(s)	126
HaeIII	GGCC	4 cut(s)	512, 895, 1602, 1904
HapII	CCGG	8 cut(s)	167, 266, 479, 513, 731, 782, 1124, 1484
HgaI	GACGC	1 cut(s)	1346
HhaI	GCGC	2 cut(s)	125, 415
Hin1II	CATG	5 cut(s)	600, 854, 869, 894, 1144
Hin6I	GCGC	2 cut(s)	123, 413
HinP1I	GCGC	2 cut(s)	123, 413
HincII	GTYRAC	3 cut(s)	519, 1066, 1195
HindII	GTYRAC	3 cut(s)	519, 1066, 1195
HinfI	GANTC	8 cut(s)	157, 431, 469, 638, 709, 1118, 1472, 1808
HpaII	CCGG	8 cut(s)	167, 266, 479, 513, 731, 782, 1124, 1484
HphI	GGTGA	4 cut(s)	256, 1113, 1750, 1838
Hpy166II	GTNNAC	5 cut(s)	151, 519, 1066, 1195, 1480
Hpy188III	TCNNGA	5 cut(s)	716, 822, 945, 1429, 1785
Hpy8I	GTNNAC	5 cut(s)	151, 519, 1066, 1195, 1480
Hpy99I	CGWCG	2 cut(s)	140, 523
HpyAV	CCTTC	5 cut(s)	241, 828, 990, 1530, 1704
HpyCH4III	ACNGT	4 cut(s)	727, 1085, 1105, 1855
HpyF3I	CTNAG	6 cut(s)	240, 533, 951, 1373, 1409, 1543
Hsp92II	CATG	5 cut(s)	600, 854, 869, 894, 1144
HspAI	GCGC	2 cut(s)	123, 413
KpnI	GGTACC	1 cut(s)	1023
Ksp22I	TGATCA	2 cut(s)	210, 1552
LguI	GCTCTTC	1 cut(s)	918
LmnI	GCTCC	6 cut(s)	355, 537, 1419, 1543, 1754, 1787
Lsp1109I	GCAGC	5 cut(s)	355, 406, 409, 1503, 1739
LweI	GCATC	6 cut(s)	367, 565, 950, 1378, 1575, 1698
MaeI	CTAG	4 cut(s)	483, 822, 1044, 1596
MaeIII	GTNAC	3 cut(s)	562, 1105, 1119
MflI	RGATCY	6 cut(s)	256, 805, 824, 859, 1369, 1616
MhlI	GDGCHC	2 cut(s)	360, 1054
MlsI	TGGCCA	1 cut(s)	1904
MluCI	AATT	3 cut(s)	214, 753, 1263
MluNI	TGGCCA	1 cut(s)	1904
MlyI	GAGTC	3 cut(s)	1127, 1481, 1817
Mox20I	TGGCCA	1 cut(s)	1904
Mph1103I	ATGCAT	1 cut(s)	892
MroXI	GAANNNNTTC	2 cut(s)	708, 1155
MscI	TGGCCA	1 cut(s)	1904
MseI	TTAA	3 cut(s)	387, 558, 1026
MslI	CAYNNNNRTG	3 cut(s)	595, 597, 870
Msp20I	TGGCCA	1 cut(s)	1904
MspA1I	CMGCKG	1 cut(s)	1730
MspI	CCGG	8 cut(s)	167, 266, 479, 513, 731, 782, 1124, 1484
MspR9I	CCNGG	9 cut(s)	167, 267, 479, 514, 783, 1484, 1485, 1532, 1889
Mva1269I	GAATGC	3 cut(s)	394, 415, 892
MvaI	CCWGG	2 cut(s)	1532, 1889
MvnI	CGCG	1 cut(s)	946
NciI	CCSGG	7 cut(s)	167, 267, 479, 514, 783, 1484, 1485
NcoI	CCATGG	1 cut(s)	1140
NheI	GCTAGC	1 cut(s)	482
NlaIII	CATG	5 cut(s)	600, 854, 869, 894, 1144
NlaIV	GGNNCC	5 cut(s)	38, 258, 357, 1021, 1415
NmuCI	GTSAC	2 cut(s)	562, 1119
NruI	TCGCGA	1 cut(s)	946
NsiI	ATGCAT	1 cut(s)	892
NspI	RCATGY	1 cut(s)	854
NspV	TTCGAA	1 cut(s)	407
PaeR7I	CTCGAG	1 cut(s)	1053
PciI	ACATGT	1 cut(s)	850
PciSI	GCTCTTC	1 cut(s)	918
PcsI	WCGNNNNNNNCGW	2 cut(s)	767, 1828
PctI	GAATGC	3 cut(s)	394, 415, 892
PdmI	GAANNNNTTC	2 cut(s)	708, 1155
PfeI	GAWTC	5 cut(s)	157, 431, 469, 638, 709
PflFI	GACNNNGTC	1 cut(s)	1424
PkrI	GCNGC	5 cut(s)	370, 421, 424, 1518, 1729
PleI	GAGTC	3 cut(s)	1126, 1480, 1816
PpsI	GAGTC	3 cut(s)	1126, 1480, 1816
PscI	ACATGT	1 cut(s)	850
PsiI	TTATAA	3 cut(s)	287, 1268, 1898
Psp6I	CCWGG	2 cut(s)	1530, 1887
PspGI	CCWGG	2 cut(s)	1530, 1887
PspN4I	GGNNCC	5 cut(s)	38, 258, 357, 1021, 1415
PspPI	GGNCC	2 cut(s)	37, 894
PspXI	VCTCGAGB	1 cut(s)	1053
PstI	CTGCAG	1 cut(s)	805
PstNI	CAGNNNCTG	1 cut(s)	674
PsuI	RGATCY	6 cut(s)	256, 805, 824, 859, 1369, 1616
PsyI	GACNNNGTC	1 cut(s)	1424
RruI	TCGCGA	1 cut(s)	946
RsaI	GTAC	5 cut(s)	152, 729, 855, 972, 1021
RsaNI	GTAC	5 cut(s)	151, 728, 854, 971, 1020
RseI	CAYNNNNRTG	3 cut(s)	595, 597, 870
SalI	GTCGAC	1 cut(s)	517
SapI	GCTCTTC	1 cut(s)	918
SaqAI	TTAA	3 cut(s)	387, 558, 1026
SatI	GCNGC	5 cut(s)	369, 420, 423, 1517, 1728
Sau96I	GGNCC	2 cut(s)	37, 894
ScaI	AGTACT	1 cut(s)	972
SchI	GAGTC	3 cut(s)	1127, 1481, 1817
ScrFI	CCNGG	9 cut(s)	167, 267, 479, 514, 783, 1484, 1485, 1532, 1889
SduI	GDGCHC	2 cut(s)	360, 1054
SfaNI	GCATC	6 cut(s)	367, 565, 950, 1378, 1575, 1698
SfcI	CTRYAG	1 cut(s)	801
Sfr274I	CTCGAG	1 cut(s)	1053
SfuI	TTCGAA	1 cut(s)	407
SinI	GGWCC	1 cut(s)	37
SlaI	CTCGAG	1 cut(s)	1053
SmaI	CCCGGG	1 cut(s)	1485
SmiMI	CAYNNNNRTG	3 cut(s)	595, 597, 870
SmlI	CTYRAG	2 cut(s)	1053, 1703
SmoI	CTYRAG	2 cut(s)	1053, 1703
SpeI	ACTAGT	1 cut(s)	1043
Sse9I	AATT	3 cut(s)	214, 753, 1263
SspI	AATATT	1 cut(s)	556
SspMI	CTAG	4 cut(s)	483, 822, 1044, 1596
StyD4I	CCNGG	9 cut(s)	165, 265, 477, 512, 781, 1482, 1483, 1530, 1887
StyI	CCWWGG	2 cut(s)	1074, 1140
TaaI	ACNGT	4 cut(s)	727, 1085, 1105, 1855
TaqI	TCGA	4 cut(s)	218, 407, 518, 1054
TaqII	GACCGA	1 cut(s)	54
TasI	AATT	3 cut(s)	214, 753, 1263
TatI	WGTACW	3 cut(s)	150, 853, 970
TfiI	GAWTC	5 cut(s)	157, 431, 469, 638, 709
Tru1I	TTAA	3 cut(s)	387, 558, 1026
Tru9I	TTAA	3 cut(s)	387, 558, 1026
TscAI	CASTG	7 cut(s)	494, 571, 654, 940, 1108, 1498, 1656
TseFI	GTSAC	2 cut(s)	562, 1119
TseI	GCWGC	5 cut(s)	368, 419, 422, 1516, 1727
Tsp45I	GTSAC	2 cut(s)	562, 1119
TspDTI	ATGAA	9 cut(s)	95, 585, 854, 894, 1200, 1287, 1362, 1647, 1653
TspGWI	ACGGA	4 cut(s)	1212, 1292, 1294, 1659
TspMI	CCCGGG	1 cut(s)	1483
TspRI	CASTG	7 cut(s)	494, 571, 654, 940, 1108, 1498, 1656
Tth111I	GACNNNGTC	1 cut(s)	1424
VpaK11BI	GGWCC	1 cut(s)	37
XbaI	TCTAGA	1 cut(s)	821
XceI	RCATGY	1 cut(s)	854
XhoI	CTCGAG	1 cut(s)	1053
XmaI	CCCGGG	1 cut(s)	1483
XmiI	GTMKAC	2 cut(s)	518, 1479
XmnI	GAANNNNTTC	2 cut(s)	708, 1155
XspI	CTAG	4 cut(s)	483, 822, 1044, 1596
ZrmI	AGTACT	1 cut(s)	972
Zsp2I	ATGCAT	1 cut(s)	892

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.