Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0006644

Physical Location & Seq

Genomic Coordinates Forward (+)

10429160 .. 10435240

Gene Structure 6081 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG113400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1905 bp

ATGGGAGAGACGGGGAAGCGGTATCGTTCGCAGAGGGACCGAGATTACGATGGCGGGAACAAGAACCAGAAGAGGCGGACGAATGACAGAGAAGATAGGGGCGGTGGCGGTGGCGGTGGCGGTGGCGACGAGGTTGTTGTGTACAGGATTCTATGCCCGGTTGGGGTCATTGGAAGCGTGATTGGGAAGAGTGGTAAAGTGATCAATTCGATTAGACAGGATAGTAGAGCTAAGGTGAAGGTTGTGGATCCATTTCCGGGTGCGAAAGATAGGGTTATAACTATTTATAGCTATGTTAGGGACAAGGAGGAGGTTGATGTTGATGATGAGTTCAGTAGTGATAGGGAGCCCTTGTGTGCTGCACAGGATGCTCTATTTAAAGTGCATTCTGCTATTTCGAATGCGCTGGCTGCTGCTGGAGATTCTGATAAGAGGAGGAGGGATAAGGAAGAGTGTCAGATTCTTGTCCCCGCTAGCCAGTGTGCTAATGTGATAGGTAAGGCCGGGTCGACGATAAAGAAACTGAGGAGCAGGACGAGGACGAATATTAAGGTCACTGCAAAAGATGCCTCCGAACCAACACATTCATGTGCAATGGACTTTGACAACTTTGTTATGATAAATGGAGAATCAGAAGCAGTGAAAAAAGCATTGTTTGCAGTTTCTGCAATCATATACAAGTTTCCTGCACGAGAACAGATTCCTCTTGATACAACAGTACCGGAAGCCCCTCCAAGCATAATAATTCCATCGGATATGCCGATTTATCAACCGGGTGGATTATATAACCCTGCAGATCCTATCATTCCTTCTAGATCCCTACCTCCACTCCTAAATGCTACACATGTACAGGATCTTCATGGTTATGCAGATACAGGGAATGCATGGCCCATATATTCATCTGCTCTTCCTTTAGTTTCTGGTTTCAGTGTGGCATCGCGATCTGAGGAGTTAGTTGTGAGAGTACTATGCCCTTCTGACAAGATTGGTCGTGTCATTGGAAAGGGTGGGGGTACCATTAAAAGCATAAGGCAGACTAGTGGTGCTCGAGTTGAGGTTGACGATACCAAGGATGACCGTGATGAGTGCATAATCACTGTTACTTCAACAGAGTCACCGGATGATCTGAAGTCCATGGCAGTTGAAGCTGTTCTATTGTTGCAAGGGAAGATAAATGATGAAGATGTTGACAATGTTTCTATACGGCTTCTTGTTCCGTCTAAAGTTATTGGTTGTATTATTGGAAAAAATGGTTCAATTATAAATGAAATACGGAAGAGAACAAAAGCTGACATCCGTATTTCTAAAGCTGATAAGCCTAAATGTGCTGACGCTAATGATGAACTTGTTGAGGTGGCAGGAGATCTCAGTAGTTTGAGAGATGCACTTATTCAGATTGTTCTAAGGCTCCGAGACGATGTCTTGAAAGATAGAGGTGGTGGTCATAACCCTGCTGTTGGTGCGGAGTCGGTATACCCGGGTAGCACTGGTCTCCCTTTGCCATCTGTGCTGCCTTCAGTTCCCCAGGTTGCTCCCTTAGGTTATGATCAGAGGGCTGAAAGTGCAAGTGGCTTGGGGATGCTTTCTTCTAGTGGCCTGTTTGGATATGGATCTCTGCCGATGGGGGAAGATGGCTACGGATCAGTGTCTTCATATTCATCCAAGCTATATGGAGGATTGCCACCCCCTTCAACACTTGAGATGCTCATTCCTGCTAATGCAGCGGGTAAGGTGATTGGCAAGGGAGGGGCAAATATAGCTAACATTCGGAAGATATCAGGAGCAATGATAGAGATTTCCGAGTCCAAATCTTCACGGGGTGATCGTATTGCTCATATATCTGGCACAGTTGAACAGAAGCGGACAGCAGAGAACTTGATCCAGGCATTTATAATGGCCATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1

Protein Analysis

634

Amino Acids

67.58

Weight (kDa)

7.01

Isoelectric Point (pI)

42.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KH_1	PF00013	48 - 97	3.2e-11	KH domain
KH_1	PF00013	152 - 221	1.5e-12	KH domain
KH_1	PF00013	320 - 371	1.3e-14	KH domain
KH_1	PF00013	401 - 466	2.6e-14	KH domain
KH_1	PF00013	565 - 628	1.9e-15	KH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006644)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G46190 AT5G46190 AT5G46190 AT5G46190
fragaria_vesca	FvH4_3g05250 FvH4_3g05250 FvH4_3g05250 FvH4_3g05250 FvH4_3g05250
malus_domestica	MD05G1281400.v1.1 MD10G1260300.v1.1
prunus_persica	Prupe.4G083200_v2.0.a1 Prupe.4G083200_v2.0.a1 Prupe.4G083200_v2.0.a1
pyrus_communis	pycom05g26150 pycom10g21620
rosa_chinensis	RchiOBHm_Chr5g0014461
rosa_laevigata	RLG00000032112
rosa_multiflora	Rmu_sc0004194.1_g000002
rosa_roxburghii	Rroxscaffold_1G00062110
rosa_rugosa	Rorug05G0018400
rosa_samantha	Rh5AG113400 Rh5BG110100 Rh5CG121900 Rh5DG109200
rosa_wichuraiana	Rw5G009840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	278, 1262, 1892
Acc65I	GGTACC	1 cut(s)	1013
AccB1I	GGYRCC	1 cut(s)	1013
AccI	GTMKAC	2 cut(s)	509, 1473
AccII	CGCG	1 cut(s)	940
AclWI	GGATC	8 cut(s)	242, 255, 791, 810, 861, 1618, 1648, 1873
AcoI	YGGCCR	1 cut(s)	1896
AcuI	CTGAAG	2 cut(s)	1148, 1500
AdeI	CACNNNGTG	1 cut(s)	1820
AfaI	GTAC	5 cut(s)	143, 720, 849, 966, 1015
AfiI	CCNNNNNNNGG	3 cut(s)	163, 257, 1457
AflIII	ACRYGT	1 cut(s)	844
AgsI	TTSAA	6 cut(s)	1107, 1145, 1257, 1426, 1692, 1853
AhlI	ACTAGT	1 cut(s)	1037
AjnI	CCWGG	2 cut(s)	1524, 1881
AluBI	AGCT	7 cut(s)	230, 291, 1148, 1289, 1310, 1666, 1760
AluI	AGCT	7 cut(s)	230, 291, 1148, 1289, 1310, 1666, 1760
Alw21I	GWGCWC	1 cut(s)	1048
Alw26I	GTCTC	3 cut(s)	2, 1407, 1496
AlwI	GGATC	8 cut(s)	242, 255, 791, 810, 861, 1618, 1648, 1873
AlwNI	CAGNNNCTG	1 cut(s)	665
Ama87I	CYCGRG	2 cut(s)	1047, 1477
AoxI	GGCC	4 cut(s)	501, 887, 1594, 1896
ApeKI	GCWGC	5 cut(s)	359, 410, 413, 1510, 1721
Asp700I	GAANNNNTTC	2 cut(s)	699, 1149
Asp718I	GGTACC	1 cut(s)	1013
AspLEI	GCGC	1 cut(s)	406
AspS9I	GGNCC	2 cut(s)	37, 888
AsuC2I	CCSGG	6 cut(s)	158, 258, 505, 774, 1478, 1479
AsuHPI	GGTGA	4 cut(s)	247, 1107, 1744, 1832
AsuII	TTCGAA	1 cut(s)	398
AsuNHI	GCTAGC	1 cut(s)	473
AvaI	CYCGRG	2 cut(s)	1047, 1477
AvaII	GGWCC	1 cut(s)	37
AxyI	CCTNAGG	1 cut(s)	1537
BaeI	ACNNNNGTAYC	4 cut(s)	702, 702, 735, 735
BalI	TGGCCA	1 cut(s)	1898
BamHI	GGATCC	1 cut(s)	247
BanI	GGYRCC	1 cut(s)	1013
BanII	GRGCYC	1 cut(s)	351
BarI	GAAGNNNNNNTAC	2 cut(s)	840, 872
BauI	CACGAG	1 cut(s)	690
BbsI	GAAGAC	1 cut(s)	1641
Bbv12I	GWGCWC	1 cut(s)	1048
BbvI	GCAGC	5 cut(s)	346, 397, 400, 1497, 1733
BccI	CCATC	5 cut(s)	44, 757, 1510, 1615, 1625
BceAI	ACGGC	1 cut(s)	1220
BciT130I	CCWGG	2 cut(s)	1526, 1883
BclI	TGATCA	2 cut(s)	201, 1546
BcnI	CCSGG	6 cut(s)	158, 258, 505, 774, 1478, 1479
BcoDI	GTCTC	3 cut(s)	2, 1407, 1496
BcuI	ACTAGT	1 cut(s)	1037
BfaI	CTAG	4 cut(s)	474, 813, 1038, 1590
BfmI	CTRYAG	1 cut(s)	792
BglII	AGATCT	1 cut(s)	1363
BisI	GCNGC	5 cut(s)	360, 411, 414, 1511, 1722
BlsI	GCNGC	5 cut(s)	361, 412, 415, 1512, 1723
BmcAI	AGTACT	1 cut(s)	966
Bme1390I	CCNGG	8 cut(s)	158, 258, 505, 774, 1478, 1479, 1526, 1883
Bme18I	GGWCC	1 cut(s)	37
BmeT110I	CYCGRG	2 cut(s)	1047, 1477
BmgT120I	GGNCC	2 cut(s)	37, 888
BmiI	GGNNCC	5 cut(s)	38, 249, 348, 1015, 1409
BmrFI	CCNGG	8 cut(s)	158, 258, 505, 774, 1478, 1479, 1526, 1883
BmsI	GCATC	6 cut(s)	358, 556, 944, 1372, 1569, 1692
BmtI	GCTAGC	1 cut(s)	477
BpiI	GAAGAC	1 cut(s)	1641
BpmI	CTGGAG	1 cut(s)	438
Bpu10I	CCTNAGC	1 cut(s)	231
Bpu14I	TTCGAA	1 cut(s)	398
BpuEI	CTTGAG	1 cut(s)	1718
BpuMI	CCSGG	6 cut(s)	158, 258, 505, 774, 1478, 1479
BsaBI	GATNNNNATC	1 cut(s)	1609
BsaI	GGTCTC	1 cut(s)	1496
BsaJI	CCNNGG	4 cut(s)	1068, 1134, 1477, 1524
BsaWI	WCCGGW	2 cut(s)	721, 1117
BsaXI	ACNNNNNCTCC	4 cut(s)	338, 368, 813, 843
Bsc4I	CCNNNNNNNGG	3 cut(s)	163, 257, 1457
Bse1I	ACTGG	2 cut(s)	478, 1492
Bse21I	CCTNAGG	1 cut(s)	1537
Bse3DI	GCAATG	2 cut(s)	600, 1791
Bse8I	GATNNNNATC	1 cut(s)	1609
BseBI	CCWGG	2 cut(s)	1526, 1883
BseDI	CCNNGG	4 cut(s)	1068, 1134, 1477, 1524
BseGI	GGATG	6 cut(s)	373, 1078, 1126, 1293, 1584, 1658
BseJI	GATNNNNATC	1 cut(s)	1609
BseLI	CCNNNNNNNGG	3 cut(s)	163, 257, 1457
BseMI	GCAATG	2 cut(s)	600, 1791
BseMII	CTCAG	3 cut(s)	515, 936, 1381
BseNI	ACTGG	2 cut(s)	478, 1492
BseRI	GAGGAG	5 cut(s)	323, 448, 451, 541, 962
BseXI	GCAGC	5 cut(s)	346, 397, 400, 1497, 1733
BsgI	GTGCAG	2 cut(s)	345, 672
Bsh1236I	CGCG	1 cut(s)	940
BshFI	GGCC	4 cut(s)	503, 889, 1596, 1898
BshNI	GGYRCC	1 cut(s)	1013
BsiHKAI	GWGCWC	1 cut(s)	1048
BsiHKCI	CYCGRG	2 cut(s)	1047, 1477
BsiSI	CCGG	7 cut(s)	158, 257, 504, 722, 773, 1118, 1478
BslFI	GGGAC	3 cut(s)	50, 314, 452
BslI	CCNNNNNNNGG	3 cut(s)	163, 257, 1457
BsmAI	GTCTC	3 cut(s)	2, 1407, 1496
BsmBI	CGTCTC	2 cut(s)	2, 1407
BsmFI	GGGAC	3 cut(s)	50, 314, 452
BsmI	GAATGC	3 cut(s)	385, 406, 886
BsnI	GGCC	4 cut(s)	503, 889, 1596, 1898
Bso31I	GGTCTC	1 cut(s)	1496
BsoBI	CYCGRG	2 cut(s)	1047, 1477
Bsp119I	TTCGAA	1 cut(s)	398
Bsp1286I	GDGCHC	2 cut(s)	351, 1048
Bsp1407I	TGTACA	2 cut(s)	141, 847
Bsp19I	CCATGG	1 cut(s)	1134
Bsp68I	TCGCGA	1 cut(s)	940
BspANI	GGCC	4 cut(s)	503, 889, 1596, 1898
BspCNI	CTCAG	3 cut(s)	516, 937, 1380
BspFNI	CGCG	1 cut(s)	940
BspLI	GGNNCC	5 cut(s)	38, 249, 348, 1015, 1409
BspMAI	CTGCAG	1 cut(s)	796
BspOI	GCTAGC	1 cut(s)	477
BspPI	GGATC	8 cut(s)	242, 255, 791, 810, 861, 1618, 1648, 1873
BspQI	GCTCTTC	1 cut(s)	912
BspT104I	TTCGAA	1 cut(s)	398
BspT107I	GGYRCC	1 cut(s)	1013
BspTNI	GGTCTC	1 cut(s)	1496
BsrDI	GCAATG	2 cut(s)	600, 1791
BsrGI	TGTACA	2 cut(s)	141, 847
BsrI	ACTGG	2 cut(s)	478, 1492
BssECI	CCNNGG	4 cut(s)	1068, 1134, 1477, 1524
BssNAI	GTATAC	1 cut(s)	1474
BssSI	CACGAG	1 cut(s)	690
BssT1I	CCWWGG	2 cut(s)	1068, 1134
Bst1107I	GTATAC	1 cut(s)	1474
Bst2BI	CACGAG	1 cut(s)	690
Bst2UI	CCWGG	2 cut(s)	1526, 1883
Bst4CI	ACNGT	4 cut(s)	718, 1079, 1099, 1849
Bst6I	CTCTTC	5 cut(s)	65, 182, 444, 912, 1271
BstAPI	GCANNNNNTGC	4 cut(s)	368, 566, 656, 665
BstAUI	TGTACA	2 cut(s)	141, 847
BstBI	TTCGAA	1 cut(s)	398
BstC8I	GCNNGC	2 cut(s)	408, 475
BstDEI	CTNAG	6 cut(s)	231, 524, 945, 1367, 1403, 1537
BstDSI	CCRYGG	1 cut(s)	1134
BstF5I	GGATG	6 cut(s)	373, 1078, 1126, 1293, 1584, 1658
BstFNI	CGCG	1 cut(s)	940
BstHHI	GCGC	1 cut(s)	406
BstMAI	GTCTC	3 cut(s)	2, 1407, 1496
BstNI	CCWGG	2 cut(s)	1526, 1883
BstNSI	RCATGY	1 cut(s)	848
BstSCI	CCNGG	8 cut(s)	156, 256, 503, 772, 1476, 1477, 1524, 1881
BstSFI	CTRYAG	1 cut(s)	792
BstUI	CGCG	1 cut(s)	940
BstV1I	GCAGC	5 cut(s)	346, 397, 400, 1497, 1733
BstV2I	GAAGAC	1 cut(s)	1641
BstX2I	RGATCY	6 cut(s)	247, 796, 815, 853, 1363, 1610
BstYI	RGATCY	6 cut(s)	247, 796, 815, 853, 1363, 1610
BstZ17I	GTATAC	1 cut(s)	1474
Bsu36I	CCTNAGG	1 cut(s)	1537
BsuRI	GGCC	4 cut(s)	503, 889, 1596, 1898
BtgI	CCRYGG	1 cut(s)	1134
BtgZI	GCGATG	1 cut(s)	921
BtsCI	GGATG	6 cut(s)	373, 1078, 1126, 1293, 1584, 1658
BtsI	GCAGTG	2 cut(s)	555, 645
BtsIMutI	CAGTG	7 cut(s)	485, 555, 645, 934, 1095, 1485, 1650
BtuMI	TCGCGA	1 cut(s)	940
Cac8I	GCNNGC	2 cut(s)	408, 475
CaiI	CAGNNNCTG	1 cut(s)	665
CfoI	GCGC	1 cut(s)	406
Cfr13I	GGNCC	2 cut(s)	37, 888
Cfr9I	CCCGGG	1 cut(s)	1477
CseI	GACGC	1 cut(s)	1340
Csp6I	GTAC	5 cut(s)	142, 719, 848, 965, 1014
CviAII	CATG	5 cut(s)	588, 845, 860, 885, 1135
CviQI	GTAC	5 cut(s)	142, 719, 848, 965, 1014
DdeI	CTNAG	6 cut(s)	231, 524, 945, 1367, 1403, 1537
DraI	TTTAAA	1 cut(s)	379
DraIII	CACNNNGTG	1 cut(s)	1820
EaeI	YGGCCR	1 cut(s)	1896
Eam1104I	CTCTTC	5 cut(s)	65, 182, 444, 912, 1271
EarI	CTCTTC	5 cut(s)	65, 182, 444, 912, 1271
EciI	GGCGGA	1 cut(s)	91
Eco130I	CCWWGG	2 cut(s)	1068, 1134
Eco24I	GRGCYC	1 cut(s)	351
Eco31I	GGTCTC	1 cut(s)	1496
Eco32I	GATATC	1 cut(s)	1776
Eco47I	GGWCC	1 cut(s)	37
Eco57I	CTGAAG	2 cut(s)	1148, 1500
Eco81I	CCTNAGG	1 cut(s)	1537
Eco88I	CYCGRG	2 cut(s)	1047, 1477
EcoRII	CCWGG	2 cut(s)	1524, 1881
EcoRV	GATATC	1 cut(s)	1776
EcoT14I	CCWWGG	2 cut(s)	1068, 1134
EcoT22I	ATGCAT	1 cut(s)	886
EcoT38I	GRGCYC	1 cut(s)	351
ErhI	CCWWGG	2 cut(s)	1068, 1134
Esp3I	CGTCTC	2 cut(s)	2, 1407
FaeI	CATG	5 cut(s)	591, 848, 863, 888, 1138
FaqI	GGGAC	3 cut(s)	50, 314, 452
FatI	CATG	5 cut(s)	587, 844, 859, 884, 1134
FauI	CCCGC	3 cut(s)	47, 478, 1717
FbaI	TGATCA	2 cut(s)	201, 1546
FblI	GTMKAC	2 cut(s)	509, 1473
Fnu4HI	GCNGC	5 cut(s)	360, 411, 414, 1511, 1722
FokI	GGATG	6 cut(s)	380, 1085, 1133, 1280, 1591, 1645
FriOI	GRGCYC	1 cut(s)	351
Fsp4HI	GCNGC	5 cut(s)	360, 411, 414, 1511, 1722
FspBI	CTAG	4 cut(s)	474, 813, 1038, 1590
GlaI	GCGC	1 cut(s)	405
GluI	GCNGC	5 cut(s)	360, 411, 414, 1511, 1722
GsuI	CTGGAG	1 cut(s)	438
HaeIII	GGCC	4 cut(s)	503, 889, 1596, 1898
HapII	CCGG	7 cut(s)	158, 257, 504, 722, 773, 1118, 1478
HgaI	GACGC	1 cut(s)	1340
HhaI	GCGC	1 cut(s)	406
Hin1II	CATG	5 cut(s)	591, 848, 863, 888, 1138
Hin6I	GCGC	1 cut(s)	404
HinP1I	GCGC	1 cut(s)	404
HincII	GTYRAC	3 cut(s)	510, 1060, 1189
HindII	GTYRAC	3 cut(s)	510, 1060, 1189
HinfI	GANTC	8 cut(s)	148, 422, 460, 629, 700, 1112, 1466, 1802
HpaII	CCGG	7 cut(s)	158, 257, 504, 722, 773, 1118, 1478
HphI	GGTGA	4 cut(s)	247, 1107, 1744, 1832
Hpy166II	GTNNAC	5 cut(s)	142, 510, 1060, 1189, 1474
Hpy188III	TCNNGA	5 cut(s)	707, 813, 939, 1423, 1779
Hpy8I	GTNNAC	5 cut(s)	142, 510, 1060, 1189, 1474
Hpy99I	CGWCG	2 cut(s)	131, 514
HpyAV	CCTTC	5 cut(s)	232, 819, 984, 1524, 1698
HpyCH4III	ACNGT	4 cut(s)	718, 1079, 1099, 1849
HpyF3I	CTNAG	6 cut(s)	231, 524, 945, 1367, 1403, 1537
Hsp92II	CATG	5 cut(s)	591, 848, 863, 888, 1138
HspAI	GCGC	1 cut(s)	404
KpnI	GGTACC	1 cut(s)	1017
Ksp22I	TGATCA	2 cut(s)	201, 1546
LguI	GCTCTTC	1 cut(s)	912
LmnI	GCTCC	5 cut(s)	346, 528, 1413, 1537, 1781
Lsp1109I	GCAGC	5 cut(s)	346, 397, 400, 1497, 1733
LweI	GCATC	6 cut(s)	358, 556, 944, 1372, 1569, 1692
MaeI	CTAG	4 cut(s)	474, 813, 1038, 1590
MaeIII	GTNAC	3 cut(s)	553, 1099, 1113
MflI	RGATCY	6 cut(s)	247, 796, 815, 853, 1363, 1610
MhlI	GDGCHC	2 cut(s)	351, 1048
MlsI	TGGCCA	1 cut(s)	1898
MluCI	AATT	3 cut(s)	205, 744, 1257
MluNI	TGGCCA	1 cut(s)	1898
MlyI	GAGTC	3 cut(s)	1121, 1475, 1811
Mox20I	TGGCCA	1 cut(s)	1898
Mph1103I	ATGCAT	1 cut(s)	886
MroXI	GAANNNNTTC	2 cut(s)	699, 1149
MscI	TGGCCA	1 cut(s)	1898
MseI	TTAA	3 cut(s)	378, 549, 1020
MslI	CAYNNNNRTG	3 cut(s)	586, 588, 864
Msp20I	TGGCCA	1 cut(s)	1898
MspA1I	CMGCKG	1 cut(s)	1724
MspI	CCGG	7 cut(s)	158, 257, 504, 722, 773, 1118, 1478
MspR9I	CCNGG	8 cut(s)	158, 258, 505, 774, 1478, 1479, 1526, 1883
Mva1269I	GAATGC	3 cut(s)	385, 406, 886
MvaI	CCWGG	2 cut(s)	1526, 1883
MvnI	CGCG	1 cut(s)	940
NciI	CCSGG	6 cut(s)	158, 258, 505, 774, 1478, 1479
NcoI	CCATGG	1 cut(s)	1134
NheI	GCTAGC	1 cut(s)	473
NlaIII	CATG	5 cut(s)	591, 848, 863, 888, 1138
NlaIV	GGNNCC	5 cut(s)	38, 249, 348, 1015, 1409
NmuCI	GTSAC	2 cut(s)	553, 1113
NruI	TCGCGA	1 cut(s)	940
NsiI	ATGCAT	1 cut(s)	886
NspI	RCATGY	1 cut(s)	848
NspV	TTCGAA	1 cut(s)	398
PaeR7I	CTCGAG	1 cut(s)	1047
PciI	ACATGT	1 cut(s)	844
PciSI	GCTCTTC	1 cut(s)	912
PcsI	WCGNNNNNNNCGW	2 cut(s)	758, 1822
PctI	GAATGC	3 cut(s)	385, 406, 886
PdmI	GAANNNNTTC	2 cut(s)	699, 1149
PfeI	GAWTC	5 cut(s)	148, 422, 460, 629, 700
PflFI	GACNNNGTC	1 cut(s)	1418
PkrI	GCNGC	5 cut(s)	361, 412, 415, 1512, 1723
PleI	GAGTC	3 cut(s)	1120, 1474, 1810
PpsI	GAGTC	3 cut(s)	1120, 1474, 1810
PscI	ACATGT	1 cut(s)	844
PsiI	TTATAA	3 cut(s)	278, 1262, 1892
Psp6I	CCWGG	2 cut(s)	1524, 1881
PspGI	CCWGG	2 cut(s)	1524, 1881
PspN4I	GGNNCC	5 cut(s)	38, 249, 348, 1015, 1409
PspPI	GGNCC	2 cut(s)	37, 888
PspXI	VCTCGAGB	1 cut(s)	1047
PstI	CTGCAG	1 cut(s)	796
PstNI	CAGNNNCTG	1 cut(s)	665
PsuI	RGATCY	6 cut(s)	247, 796, 815, 853, 1363, 1610
PsyI	GACNNNGTC	1 cut(s)	1418
RruI	TCGCGA	1 cut(s)	940
RsaI	GTAC	5 cut(s)	143, 720, 849, 966, 1015
RsaNI	GTAC	5 cut(s)	142, 719, 848, 965, 1014
RseI	CAYNNNNRTG	3 cut(s)	586, 588, 864
SalI	GTCGAC	1 cut(s)	508
SapI	GCTCTTC	1 cut(s)	912
SaqAI	TTAA	3 cut(s)	378, 549, 1020
SatI	GCNGC	5 cut(s)	360, 411, 414, 1511, 1722
Sau96I	GGNCC	2 cut(s)	37, 888
ScaI	AGTACT	1 cut(s)	966
SchI	GAGTC	3 cut(s)	1121, 1475, 1811
ScrFI	CCNGG	8 cut(s)	158, 258, 505, 774, 1478, 1479, 1526, 1883
SduI	GDGCHC	2 cut(s)	351, 1048
SfaNI	GCATC	6 cut(s)	358, 556, 944, 1372, 1569, 1692
SfcI	CTRYAG	1 cut(s)	792
Sfr274I	CTCGAG	1 cut(s)	1047
SfuI	TTCGAA	1 cut(s)	398
SinI	GGWCC	1 cut(s)	37
SlaI	CTCGAG	1 cut(s)	1047
SmaI	CCCGGG	1 cut(s)	1479
SmiMI	CAYNNNNRTG	3 cut(s)	586, 588, 864
SmlI	CTYRAG	2 cut(s)	1047, 1697
SmoI	CTYRAG	2 cut(s)	1047, 1697
SpeI	ACTAGT	1 cut(s)	1037
Sse9I	AATT	3 cut(s)	205, 744, 1257
SspI	AATATT	1 cut(s)	547
SspMI	CTAG	4 cut(s)	474, 813, 1038, 1590
StyD4I	CCNGG	8 cut(s)	156, 256, 503, 772, 1476, 1477, 1524, 1881
StyI	CCWWGG	2 cut(s)	1068, 1134
TaaI	ACNGT	4 cut(s)	718, 1079, 1099, 1849
TaqI	TCGA	4 cut(s)	209, 398, 509, 1048
TaqII	GACCGA	1 cut(s)	54
TasI	AATT	3 cut(s)	205, 744, 1257
TatI	WGTACW	3 cut(s)	141, 847, 964
TfiI	GAWTC	5 cut(s)	148, 422, 460, 629, 700
Tru1I	TTAA	3 cut(s)	378, 549, 1020
Tru9I	TTAA	3 cut(s)	378, 549, 1020
TscAI	CASTG	7 cut(s)	485, 562, 645, 934, 1102, 1492, 1650
TseFI	GTSAC	2 cut(s)	553, 1113
TseI	GCWGC	5 cut(s)	359, 410, 413, 1510, 1721
Tsp45I	GTSAC	2 cut(s)	553, 1113
TspDTI	ATGAA	8 cut(s)	576, 848, 888, 1194, 1281, 1356, 1641, 1647
TspGWI	ACGGA	4 cut(s)	1206, 1286, 1288, 1653
TspMI	CCCGGG	1 cut(s)	1477
TspRI	CASTG	7 cut(s)	485, 562, 645, 934, 1102, 1492, 1650
Tth111I	GACNNNGTC	1 cut(s)	1418
VpaK11BI	GGWCC	1 cut(s)	37
XbaI	TCTAGA	1 cut(s)	812
XceI	RCATGY	1 cut(s)	848
XhoI	CTCGAG	1 cut(s)	1047
XmaI	CCCGGG	1 cut(s)	1477
XmiI	GTMKAC	2 cut(s)	509, 1473
XmnI	GAANNNNTTC	2 cut(s)	699, 1149
XspI	CTAG	4 cut(s)	474, 813, 1038, 1590
ZrmI	AGTACT	1 cut(s)	966
Zsp2I	ATGCAT	1 cut(s)	886

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.