Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0006644

Physical Location & Seq

Genomic Coordinates Forward (+)

11069815 .. 11074675

Gene Structure 4861 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000032112

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1908 bp

ATGGGAGAGACGGGGAAGCGGTATCGTTCGCAGAGGGACCGAGATTACGATGGGGGGAACAAGAACCAGAAGAGGCGGATGAATGACAGAGAAGACAGGGGCGGTGGTGGTGGAGGCGCTGGCGGCGGCGATGAGGTTGTTGCATACAGGATTCTATGCCCTGTTGGTGTTATTGGAAGCGTGATTGGGAAGAGTGGGAAAGTGATCAATTCGATTAGGCAGGATAGTAGAGCTAAGGTGAAGGTTGTGGATCCATTTCCGGGTGCGAAAGATAGGGTTATAACTATTTATAGCTATGTTAGGGATAAGGAGGAGGTTGATGTTGATGATGAGTTCAGTAGTGATAGGGAGCCCTTGTGTGCTGCACAGGATGCTCTATTCAAAGTGCATTCTGCTATTTCGAATGCGCTGGCTGCTGCTGGAGATTCTGATAAGAGAAGGAGGGATAAGGAAGAGTGTCAGATTCTTGTCCCAGCTAGCCAGTGTGCTAATGTGATAGGTAAGGCCGGGTCGACGATAAAGAAACTGAGGAGCAGGACGAGGACGAATATTAAGGTCACTGCAAAAGATGCCTCTGAACCAACACATTCATGTGCAATGGACTTTGACAACTTTGTTATGATAAATGGAGAATCAGAAGCAGTGAAAAAAGCATTATTTGCAGTTTCTGCAATCATATACAAGTTTCCTGCGCGAGAACAGATCCCTCTTGATACAACAGTACCGGAAGCCCCTCCAAGCATAATAATTCCATCGGATATGCCGATTTATCAACCGGGTGGATTATATAACCCTGCAGATCCTATTATTCCTTCTAGATCCCTACCTCCACTCCTAAATGCTACACATGTACAGGATCTTCAGGGTTATGCGGATACAGGGAATGCATGGCCCATATATTCATCTGCTCTTCCTTTAGTTTCTGGTTTCAGTGTGGCATCACGATCTGAGGAGTTAGTTGTGAGAGTACTATGCCCTTCTGACAAGATTGGTCGTGTCATTGGAAAGGGTGGGGGTACCATTAAAAGCATAAGGCAGACTAGTGGTGCTCGAGTTGAGGTTGATGATACCAAGGATGACCGTGATGAGTGCATAATCACTGTTACTGCAACAGAGTCACCGGATGATCTGAAGTCCATGGCAGTTGAAGCTGTTCTATTGTTGCAAGGGAAGATAAATGATGAAGATGTTGACAATGTTTCTATACGGCTTCTTGTTCCGTCTAAAGTTATTGGTTGTATTATTGGAAAAAATGGTTCAATTATAAATGAAATAAGGAAGAGAACAAAAGCTGACATCCGTATTTCTAAAGCTGATAAACCTAAATGTGCTGACGCTAATGATGAACTTGTTGAGGTGGCAGGAGATCTCAGTAGTTTGAGAGATGCACTTATTCAGATTGTTCTAAGGCTCCGAGACGATGTCTTGAAAGATAGAGATGGTGGTCATAACCCTGCTGTTGGTGCTGAGTCTGTATACCCGGGTAGCACTGGTCTCCCTTTGCCATCTGTGCTGCCTTCAGTTCCCCAGGTTGCTCCCTTAGGTTATGATCAGAGGGCTGAAAGTGCAAGTGGCTTGGGGATGATTTCTTCTAGTGGCCTGTTTGGATATGGATCTCTGCCGATGGGGGAAGATGGCTACGGATCAGTGTCTTCATATTCATCCAAGCTATATGGAGGATTGCCACCCCCTTCAACACTTGAGATGCTCATTCCTGCTAATGCAGCGGGCAGGGTGATTGGCAAAGGAGGGGCAAATATAGCTAACATTCGGAAGATATCAGGAGCAATGATAGAGATTTCCGAGTCCAAATCTTCACGGGGTGATCGTATTGCTCATATATCTGGCACAGTTGAACAGAAGCGGACAGCAGAGAACTTGATCCAGGCATTTATAATGGCCATCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1

Protein Analysis

636

Amino Acids

67.72

Weight (kDa)

6.6

Isoelectric Point (pI)

43.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KH_1	PF00013	49 - 98	4e-11	KH domain
KH_1	PF00013	153 - 222	1.5e-12	KH domain
KH_1	PF00013	321 - 372	1.1e-14	KH domain
KH_1	PF00013	402 - 467	2.7e-14	KH domain
KH_1	PF00013	566 - 629	9.5e-16	KH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006644)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G46190 AT5G46190 AT5G46190 AT5G46190
fragaria_vesca	FvH4_3g05250 FvH4_3g05250 FvH4_3g05250 FvH4_3g05250 FvH4_3g05250
malus_domestica	MD05G1281400.v1.1 MD10G1260300.v1.1
prunus_persica	Prupe.4G083200_v2.0.a1 Prupe.4G083200_v2.0.a1 Prupe.4G083200_v2.0.a1
pyrus_communis	pycom05g26150 pycom10g21620
rosa_chinensis	RchiOBHm_Chr5g0014461
rosa_laevigata	RLG00000032112
rosa_multiflora	Rmu_sc0004194.1_g000002
rosa_roxburghii	Rroxscaffold_1G00062110
rosa_rugosa	Rorug05G0018400
rosa_samantha	Rh5AG113400 Rh5BG110100 Rh5CG121900 Rh5DG109200
rosa_wichuraiana	Rw5G009840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	281, 1265, 1895
Acc65I	GGTACC	1 cut(s)	1016
AccB1I	GGYRCC	1 cut(s)	1016
AccI	GTMKAC	2 cut(s)	512, 1476
AccII	CGCG	1 cut(s)	694
AciI	CCGC	8 cut(s)	19, 76, 102, 123, 126, 872, 1727, 1864
AclWI	GGATC	9 cut(s)	245, 258, 697, 794, 813, 864, 1621, 1651, 1876
AcoI	YGGCCR	1 cut(s)	1899
AcuI	CTGAAG	3 cut(s)	845, 1151, 1503
AdeI	CACNNNGTG	1 cut(s)	1823
AfaI	GTAC	4 cut(s)	723, 852, 969, 1018
AfiI	CCNNNNNNNGG	2 cut(s)	260, 1460
AflIII	ACRYGT	1 cut(s)	847
AgsI	TTSAA	6 cut(s)	382, 1148, 1260, 1429, 1695, 1856
AhlI	ACTAGT	1 cut(s)	1040
AjnI	CCWGG	2 cut(s)	1527, 1884
AluBI	AGCT	8 cut(s)	233, 294, 476, 1151, 1292, 1313, 1669, 1763
AluI	AGCT	8 cut(s)	233, 294, 476, 1151, 1292, 1313, 1669, 1763
Alw21I	GWGCWC	1 cut(s)	1051
Alw26I	GTCTC	3 cut(s)	2, 1410, 1499
AlwI	GGATC	9 cut(s)	245, 258, 697, 794, 813, 864, 1621, 1651, 1876
AlwNI	CAGNNNCTG	1 cut(s)	668
Ama87I	CYCGRG	2 cut(s)	1050, 1480
AoxI	GGCC	4 cut(s)	504, 890, 1597, 1899
ApeKI	GCWGC	5 cut(s)	362, 413, 416, 1513, 1724
Asp700I	GAANNNNTTC	1 cut(s)	1152
Asp718I	GGTACC	1 cut(s)	1016
AspLEI	GCGC	3 cut(s)	119, 409, 694
AspS9I	GGNCC	2 cut(s)	37, 891
AsuC2I	CCSGG	5 cut(s)	261, 508, 777, 1481, 1482
AsuHPI	GGTGA	4 cut(s)	250, 1110, 1747, 1835
AsuII	TTCGAA	1 cut(s)	401
AsuNHI	GCTAGC	1 cut(s)	476
AvaI	CYCGRG	2 cut(s)	1050, 1480
AvaII	GGWCC	1 cut(s)	37
AxyI	CCTNAGG	1 cut(s)	1540
BaeI	ACNNNNGTAYC	4 cut(s)	705, 705, 738, 738
BalI	TGGCCA	1 cut(s)	1901
BamHI	GGATCC	1 cut(s)	250
BanI	GGYRCC	1 cut(s)	1016
BanII	GRGCYC	1 cut(s)	354
BarI	GAAGNNNNNNTAC	2 cut(s)	843, 875
BbsI	GAAGAC	2 cut(s)	99, 1644
Bbv12I	GWGCWC	1 cut(s)	1051
BbvI	GCAGC	5 cut(s)	349, 400, 403, 1500, 1736
BccI	CCATC	6 cut(s)	44, 760, 1433, 1513, 1618, 1628
BceAI	ACGGC	1 cut(s)	1223
BciT130I	CCWGG	2 cut(s)	1529, 1886
BciVI	GTATCC	1 cut(s)	868
BclI	TGATCA	2 cut(s)	204, 1549
BcnI	CCSGG	5 cut(s)	261, 508, 777, 1481, 1482
BcoDI	GTCTC	3 cut(s)	2, 1410, 1499
BcuI	ACTAGT	1 cut(s)	1040
BfaI	CTAG	4 cut(s)	477, 816, 1041, 1593
BfmI	CTRYAG	1 cut(s)	795
BfoI	RGCGCY	1 cut(s)	120
BfuI	GTATCC	1 cut(s)	868
BglII	AGATCT	1 cut(s)	1366
BisI	GCNGC	7 cut(s)	124, 127, 363, 414, 417, 1514, 1725
BlsI	GCNGC	7 cut(s)	125, 128, 364, 415, 418, 1515, 1726
BmcAI	AGTACT	1 cut(s)	969
Bme1390I	CCNGG	7 cut(s)	261, 508, 777, 1481, 1482, 1529, 1886
Bme18I	GGWCC	1 cut(s)	37
BmeT110I	CYCGRG	2 cut(s)	1050, 1480
BmgT120I	GGNCC	2 cut(s)	37, 891
BmiI	GGNNCC	5 cut(s)	38, 252, 351, 1018, 1412
BmrFI	CCNGG	7 cut(s)	261, 508, 777, 1481, 1482, 1529, 1886
BmsI	GCATC	5 cut(s)	361, 559, 947, 1375, 1695
BmtI	GCTAGC	1 cut(s)	480
BpiI	GAAGAC	2 cut(s)	99, 1644
BpmI	CTGGAG	1 cut(s)	441
Bpu10I	CCTNAGC	1 cut(s)	234
Bpu14I	TTCGAA	1 cut(s)	401
BpuEI	CTTGAG	1 cut(s)	1721
BpuMI	CCSGG	5 cut(s)	261, 508, 777, 1481, 1482
BsaBI	GATNNNNATC	1 cut(s)	1612
BsaI	GGTCTC	1 cut(s)	1499
BsaJI	CCNNGG	4 cut(s)	1071, 1137, 1480, 1527
BsaWI	WCCGGW	2 cut(s)	724, 1120
BsaXI	ACNNNNNCTCC	4 cut(s)	341, 371, 816, 846
Bsc4I	CCNNNNNNNGG	2 cut(s)	260, 1460
Bse1I	ACTGG	2 cut(s)	481, 1495
Bse21I	CCTNAGG	1 cut(s)	1540
Bse3DI	GCAATG	2 cut(s)	603, 1794
Bse8I	GATNNNNATC	1 cut(s)	1612
BseBI	CCWGG	2 cut(s)	1529, 1886
BseDI	CCNNGG	4 cut(s)	1071, 1137, 1480, 1527
BseGI	GGATG	7 cut(s)	84, 376, 1081, 1129, 1296, 1587, 1661
BseJI	GATNNNNATC	1 cut(s)	1612
BseLI	CCNNNNNNNGG	2 cut(s)	260, 1460
BseMI	GCAATG	2 cut(s)	603, 1794
BseMII	CTCAG	4 cut(s)	518, 939, 1384, 1458
BseNI	ACTGG	2 cut(s)	481, 1495
BseRI	GAGGAG	3 cut(s)	326, 544, 965
BseXI	GCAGC	5 cut(s)	349, 400, 403, 1500, 1736
BseYI	CCCAGC	1 cut(s)	472
BsgI	GTGCAG	1 cut(s)	348
Bsh1236I	CGCG	1 cut(s)	694
BshFI	GGCC	4 cut(s)	506, 892, 1599, 1901
BshNI	GGYRCC	1 cut(s)	1016
BsiHKAI	GWGCWC	1 cut(s)	1051
BsiHKCI	CYCGRG	2 cut(s)	1050, 1480
BsiSI	CCGG	6 cut(s)	260, 507, 725, 776, 1121, 1481
BslFI	GGGAC	2 cut(s)	50, 455
BslI	CCNNNNNNNGG	2 cut(s)	260, 1460
BsmAI	GTCTC	3 cut(s)	2, 1410, 1499
BsmBI	CGTCTC	2 cut(s)	2, 1410
BsmFI	GGGAC	2 cut(s)	50, 455
BsmI	GAATGC	3 cut(s)	388, 409, 889
BsnI	GGCC	4 cut(s)	506, 892, 1599, 1901
Bso31I	GGTCTC	1 cut(s)	1499
BsoBI	CYCGRG	2 cut(s)	1050, 1480
Bsp119I	TTCGAA	1 cut(s)	401
Bsp1286I	GDGCHC	2 cut(s)	354, 1051
Bsp1407I	TGTACA	1 cut(s)	850
Bsp19I	CCATGG	1 cut(s)	1137
BspACI	CCGC	8 cut(s)	19, 76, 102, 123, 126, 872, 1727, 1864
BspANI	GGCC	4 cut(s)	506, 892, 1599, 1901
BspCNI	CTCAG	4 cut(s)	519, 940, 1383, 1459
BspFNI	CGCG	1 cut(s)	694
BspLI	GGNNCC	5 cut(s)	38, 252, 351, 1018, 1412
BspMAI	CTGCAG	1 cut(s)	799
BspOI	GCTAGC	1 cut(s)	480
BspPI	GGATC	9 cut(s)	245, 258, 697, 794, 813, 864, 1621, 1651, 1876
BspQI	GCTCTTC	1 cut(s)	915
BspT104I	TTCGAA	1 cut(s)	401
BspT107I	GGYRCC	1 cut(s)	1016
BspTNI	GGTCTC	1 cut(s)	1499
BsrDI	GCAATG	2 cut(s)	603, 1794
BsrGI	TGTACA	1 cut(s)	850
BsrI	ACTGG	2 cut(s)	481, 1495
BssECI	CCNNGG	4 cut(s)	1071, 1137, 1480, 1527
BssNAI	GTATAC	1 cut(s)	1477
BssT1I	CCWWGG	2 cut(s)	1071, 1137
Bst1107I	GTATAC	1 cut(s)	1477
Bst2UI	CCWGG	2 cut(s)	1529, 1886
Bst4CI	ACNGT	4 cut(s)	721, 1082, 1102, 1852
Bst6I	CTCTTC	5 cut(s)	65, 185, 447, 915, 1274
BstAPI	GCANNNNNTGC	4 cut(s)	371, 569, 659, 668
BstAUI	TGTACA	1 cut(s)	850
BstBI	TTCGAA	1 cut(s)	401
BstC8I	GCNNGC	4 cut(s)	121, 411, 478, 1729
BstDEI	CTNAG	7 cut(s)	234, 527, 948, 1370, 1406, 1467, 1540
BstDSI	CCRYGG	1 cut(s)	1137
BstF5I	GGATG	7 cut(s)	84, 376, 1081, 1129, 1296, 1587, 1661
BstFNI	CGCG	1 cut(s)	694
BstH2I	RGCGCY	1 cut(s)	120
BstHHI	GCGC	3 cut(s)	119, 409, 694
BstMAI	GTCTC	3 cut(s)	2, 1410, 1499
BstNI	CCWGG	2 cut(s)	1529, 1886
BstNSI	RCATGY	1 cut(s)	851
BstSCI	CCNGG	7 cut(s)	259, 506, 775, 1479, 1480, 1527, 1884
BstSFI	CTRYAG	1 cut(s)	795
BstUI	CGCG	1 cut(s)	694
BstV1I	GCAGC	5 cut(s)	349, 400, 403, 1500, 1736
BstV2I	GAAGAC	2 cut(s)	99, 1644
BstX2I	RGATCY	7 cut(s)	250, 702, 799, 818, 856, 1366, 1613
BstYI	RGATCY	7 cut(s)	250, 702, 799, 818, 856, 1366, 1613
BstZ17I	GTATAC	1 cut(s)	1477
Bsu36I	CCTNAGG	1 cut(s)	1540
BsuI	GTATCC	1 cut(s)	868
BsuRI	GGCC	4 cut(s)	506, 892, 1599, 1901
BtgI	CCRYGG	1 cut(s)	1137
BtgZI	GCGATG	1 cut(s)	144
BtsCI	GGATG	7 cut(s)	84, 376, 1081, 1129, 1296, 1587, 1661
BtsI	GCAGTG	2 cut(s)	558, 648
BtsIMutI	CAGTG	7 cut(s)	488, 558, 648, 937, 1098, 1488, 1653
Cac8I	GCNNGC	4 cut(s)	121, 411, 478, 1729
CaiI	CAGNNNCTG	1 cut(s)	668
CfoI	GCGC	3 cut(s)	119, 409, 694
Cfr13I	GGNCC	2 cut(s)	37, 891
Cfr9I	CCCGGG	1 cut(s)	1480
CseI	GACGC	1 cut(s)	1343
Csp6I	GTAC	4 cut(s)	722, 851, 968, 1017
CviAII	CATG	4 cut(s)	591, 848, 888, 1138
CviQI	GTAC	4 cut(s)	722, 851, 968, 1017
DdeI	CTNAG	7 cut(s)	234, 527, 948, 1370, 1406, 1467, 1540
DraIII	CACNNNGTG	1 cut(s)	1823
EaeI	YGGCCR	1 cut(s)	1899
Eam1104I	CTCTTC	5 cut(s)	65, 185, 447, 915, 1274
EarI	CTCTTC	5 cut(s)	65, 185, 447, 915, 1274
EciI	GGCGGA	1 cut(s)	91
Eco130I	CCWWGG	2 cut(s)	1071, 1137
Eco24I	GRGCYC	1 cut(s)	354
Eco31I	GGTCTC	1 cut(s)	1499
Eco32I	GATATC	1 cut(s)	1779
Eco47I	GGWCC	1 cut(s)	37
Eco57I	CTGAAG	3 cut(s)	845, 1151, 1503
Eco81I	CCTNAGG	1 cut(s)	1540
Eco88I	CYCGRG	2 cut(s)	1050, 1480
EcoRII	CCWGG	2 cut(s)	1527, 1884
EcoRV	GATATC	1 cut(s)	1779
EcoT14I	CCWWGG	2 cut(s)	1071, 1137
EcoT22I	ATGCAT	1 cut(s)	889
EcoT38I	GRGCYC	1 cut(s)	354
ErhI	CCWWGG	2 cut(s)	1071, 1137
Esp3I	CGTCTC	2 cut(s)	2, 1410
FaeI	CATG	4 cut(s)	594, 851, 891, 1141
FaqI	GGGAC	2 cut(s)	50, 455
FatI	CATG	4 cut(s)	590, 847, 887, 1137
FauI	CCCGC	1 cut(s)	1720
FbaI	TGATCA	2 cut(s)	204, 1549
FblI	GTMKAC	2 cut(s)	512, 1476
Fnu4HI	GCNGC	7 cut(s)	124, 127, 363, 414, 417, 1514, 1725
FokI	GGATG	7 cut(s)	91, 383, 1088, 1136, 1283, 1594, 1648
FriOI	GRGCYC	1 cut(s)	354
Fsp4HI	GCNGC	7 cut(s)	124, 127, 363, 414, 417, 1514, 1725
FspBI	CTAG	4 cut(s)	477, 816, 1041, 1593
GlaI	GCGC	3 cut(s)	118, 408, 693
GluI	GCNGC	7 cut(s)	124, 127, 363, 414, 417, 1514, 1725
GsaI	CCCAGC	1 cut(s)	476
GsuI	CTGGAG	1 cut(s)	441
HaeII	RGCGCY	1 cut(s)	120
HaeIII	GGCC	4 cut(s)	506, 892, 1599, 1901
HapII	CCGG	6 cut(s)	260, 507, 725, 776, 1121, 1481
HgaI	GACGC	1 cut(s)	1343
HhaI	GCGC	3 cut(s)	119, 409, 694
Hin1II	CATG	4 cut(s)	594, 851, 891, 1141
Hin6I	GCGC	3 cut(s)	117, 407, 692
HinP1I	GCGC	3 cut(s)	117, 407, 692
HincII	GTYRAC	2 cut(s)	513, 1192
HindII	GTYRAC	2 cut(s)	513, 1192
HinfI	GANTC	7 cut(s)	151, 425, 463, 632, 1115, 1469, 1805
HpaII	CCGG	6 cut(s)	260, 507, 725, 776, 1121, 1481
HphI	GGTGA	4 cut(s)	250, 1110, 1747, 1835
Hpy166II	GTNNAC	3 cut(s)	513, 1192, 1477
Hpy188III	TCNNGA	5 cut(s)	710, 816, 942, 1426, 1782
Hpy8I	GTNNAC	3 cut(s)	513, 1192, 1477
Hpy99I	CGWCG	1 cut(s)	517
HpyAV	CCTTC	6 cut(s)	235, 432, 822, 987, 1527, 1701
HpyCH4III	ACNGT	4 cut(s)	721, 1082, 1102, 1852
HpyF3I	CTNAG	7 cut(s)	234, 527, 948, 1370, 1406, 1467, 1540
Hsp92II	CATG	4 cut(s)	594, 851, 891, 1141
HspAI	GCGC	3 cut(s)	117, 407, 692
KpnI	GGTACC	1 cut(s)	1020
Ksp22I	TGATCA	2 cut(s)	204, 1549
LguI	GCTCTTC	1 cut(s)	915
LmnI	GCTCC	5 cut(s)	349, 531, 1416, 1540, 1784
Lsp1109I	GCAGC	5 cut(s)	349, 400, 403, 1500, 1736
LweI	GCATC	5 cut(s)	361, 559, 947, 1375, 1695
MaeI	CTAG	4 cut(s)	477, 816, 1041, 1593
MaeIII	GTNAC	3 cut(s)	556, 1102, 1116
MflI	RGATCY	7 cut(s)	250, 702, 799, 818, 856, 1366, 1613
MhlI	GDGCHC	2 cut(s)	354, 1051
MlsI	TGGCCA	1 cut(s)	1901
MluCI	AATT	3 cut(s)	208, 747, 1260
MluNI	TGGCCA	1 cut(s)	1901
MlyI	GAGTC	3 cut(s)	1124, 1478, 1814
Mox20I	TGGCCA	1 cut(s)	1901
Mph1103I	ATGCAT	1 cut(s)	889
MroXI	GAANNNNTTC	1 cut(s)	1152
MscI	TGGCCA	1 cut(s)	1901
MseI	TTAA	2 cut(s)	552, 1023
MslI	CAYNNNNRTG	2 cut(s)	589, 591
Msp20I	TGGCCA	1 cut(s)	1901
MspA1I	CMGCKG	1 cut(s)	1727
MspI	CCGG	6 cut(s)	260, 507, 725, 776, 1121, 1481
MspR9I	CCNGG	7 cut(s)	261, 508, 777, 1481, 1482, 1529, 1886
Mva1269I	GAATGC	3 cut(s)	388, 409, 889
MvaI	CCWGG	2 cut(s)	1529, 1886
MvnI	CGCG	1 cut(s)	694
NciI	CCSGG	5 cut(s)	261, 508, 777, 1481, 1482
NcoI	CCATGG	1 cut(s)	1137
NheI	GCTAGC	1 cut(s)	476
NlaIII	CATG	4 cut(s)	594, 851, 891, 1141
NlaIV	GGNNCC	5 cut(s)	38, 252, 351, 1018, 1412
NmuCI	GTSAC	2 cut(s)	556, 1116
NsiI	ATGCAT	1 cut(s)	889
NspI	RCATGY	1 cut(s)	851
NspV	TTCGAA	1 cut(s)	401
PaeR7I	CTCGAG	1 cut(s)	1050
PciI	ACATGT	1 cut(s)	847
PciSI	GCTCTTC	1 cut(s)	915
PcsI	WCGNNNNNNNCGW	2 cut(s)	761, 1825
PctI	GAATGC	3 cut(s)	388, 409, 889
PdmI	GAANNNNTTC	1 cut(s)	1152
PfeI	GAWTC	4 cut(s)	151, 425, 463, 632
PflFI	GACNNNGTC	1 cut(s)	1421
PkrI	GCNGC	7 cut(s)	125, 128, 364, 415, 418, 1515, 1726
PleI	GAGTC	3 cut(s)	1123, 1477, 1813
PpsI	GAGTC	3 cut(s)	1123, 1477, 1813
PscI	ACATGT	1 cut(s)	847
PsiI	TTATAA	3 cut(s)	281, 1265, 1895
Psp6I	CCWGG	2 cut(s)	1527, 1884
PspFI	CCCAGC	1 cut(s)	472
PspGI	CCWGG	2 cut(s)	1527, 1884
PspN4I	GGNNCC	5 cut(s)	38, 252, 351, 1018, 1412
PspPI	GGNCC	2 cut(s)	37, 891
PspXI	VCTCGAGB	1 cut(s)	1050
PstI	CTGCAG	1 cut(s)	799
PstNI	CAGNNNCTG	1 cut(s)	668
PsuI	RGATCY	7 cut(s)	250, 702, 799, 818, 856, 1366, 1613
PsyI	GACNNNGTC	1 cut(s)	1421
RsaI	GTAC	4 cut(s)	723, 852, 969, 1018
RsaNI	GTAC	4 cut(s)	722, 851, 968, 1017
RseI	CAYNNNNRTG	2 cut(s)	589, 591
SalI	GTCGAC	1 cut(s)	511
SapI	GCTCTTC	1 cut(s)	915
SaqAI	TTAA	2 cut(s)	552, 1023
SatI	GCNGC	7 cut(s)	124, 127, 363, 414, 417, 1514, 1725
Sau96I	GGNCC	2 cut(s)	37, 891
ScaI	AGTACT	1 cut(s)	969
SchI	GAGTC	3 cut(s)	1124, 1478, 1814
ScrFI	CCNGG	7 cut(s)	261, 508, 777, 1481, 1482, 1529, 1886
SduI	GDGCHC	2 cut(s)	354, 1051
SfaNI	GCATC	5 cut(s)	361, 559, 947, 1375, 1695
SfcI	CTRYAG	1 cut(s)	795
Sfr274I	CTCGAG	1 cut(s)	1050
SfuI	TTCGAA	1 cut(s)	401
SinI	GGWCC	1 cut(s)	37
SlaI	CTCGAG	1 cut(s)	1050
SmaI	CCCGGG	1 cut(s)	1482
SmiMI	CAYNNNNRTG	2 cut(s)	589, 591
SmlI	CTYRAG	2 cut(s)	1050, 1700
SmoI	CTYRAG	2 cut(s)	1050, 1700
SpeI	ACTAGT	1 cut(s)	1040
Sse9I	AATT	3 cut(s)	208, 747, 1260
SsiI	CCGC	8 cut(s)	19, 76, 102, 123, 126, 872, 1727, 1864
SspI	AATATT	1 cut(s)	550
SspMI	CTAG	4 cut(s)	477, 816, 1041, 1593
StyD4I	CCNGG	7 cut(s)	259, 506, 775, 1479, 1480, 1527, 1884
StyI	CCWWGG	2 cut(s)	1071, 1137
TaaI	ACNGT	4 cut(s)	721, 1082, 1102, 1852
TaqI	TCGA	4 cut(s)	212, 401, 512, 1051
TaqII	GACCGA	1 cut(s)	54
TasI	AATT	3 cut(s)	208, 747, 1260
TatI	WGTACW	2 cut(s)	850, 967
TauI	GCSGC	2 cut(s)	126, 129
TfiI	GAWTC	4 cut(s)	151, 425, 463, 632
Tru1I	TTAA	2 cut(s)	552, 1023
Tru9I	TTAA	2 cut(s)	552, 1023
TscAI	CASTG	7 cut(s)	488, 565, 648, 937, 1105, 1495, 1653
TseFI	GTSAC	2 cut(s)	556, 1116
TseI	GCWGC	5 cut(s)	362, 413, 416, 1513, 1724
Tsp45I	GTSAC	2 cut(s)	556, 1116
TspDTI	ATGAA	8 cut(s)	95, 579, 891, 1197, 1284, 1359, 1644, 1650
TspGWI	ACGGA	3 cut(s)	1209, 1289, 1656
TspMI	CCCGGG	1 cut(s)	1480
TspRI	CASTG	7 cut(s)	488, 565, 648, 937, 1105, 1495, 1653
Tth111I	GACNNNGTC	1 cut(s)	1421
VpaK11BI	GGWCC	1 cut(s)	37
XbaI	TCTAGA	1 cut(s)	815
XceI	RCATGY	1 cut(s)	851
XhoI	CTCGAG	1 cut(s)	1050
XmaI	CCCGGG	1 cut(s)	1480
XmiI	GTMKAC	2 cut(s)	512, 1476
XmnI	GAANNNNTTC	1 cut(s)	1152
XspI	CTAG	4 cut(s)	477, 816, 1041, 1593
ZrmI	AGTACT	1 cut(s)	969
Zsp2I	ATGCAT	1 cut(s)	889

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.