Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0010642

Physical Location & Seq

Genomic Coordinates Forward (+)

4400125 .. 4405619

Gene Structure 5495 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g07420.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2934 bp

ATGATGCAACCTGAGGAGGATCATCGGCATCATCTATGCAGTACCTGTGGTGATGCCAATGGGGAGGTGTTTGTGGCTTGCCATGAGTGCCGTTCCCCTATTTGCAGGGCTTGTTTTGATGATGATGTCAAGGAGGGGCGCAAGGTTTGCTTGCAGTGTGGCACTGCGTATGATGAGAAGACACTGGCTGAGCATGAAACAAAAGTATCAGGCACTCGATCAACAATGGCATCTCACTTGGAAAATCCTAAGGATGTTGGAATTCATGCTAGACATGTCAGCACTGTGTCTACAGTGGATAGTGAATTAAATGATGAATCTGGGAATCCAATATGGAAGAATCGAGTAGAGAGTTGGAAGGATAAAAAGAGCAAGAAGAAAAAGGATGCGCCTAAGGCAGAAAAGGTGGCTGAAGTTCCACCTGAGCAGCAAATGGCAGAGAATCTTGCCCCAGAAGCTGCGGAACCACTTTCAATCGTTGTTCCACTTCCATCTAATAAAATCACACCATACAGAATTATAATAATCACGCGACTGATCATTCTTGGTCTCTTCTTCCAATATCGAGTCACACATCCTGTTGATAGTGCTTATGGTCTATGGCTCACTTCTATCATTTGTGAGATCTGGTTCGCTTTTTCTTGGGTGTTGGATCAATTTCCTAAGTGGTCTCCAGTTAGTAGGATTACATATCCTGAAGTTTTATCGGCCAGATTCGAAAGAGAGGGTGAACCTTCTCAGCTAGCTCCTGTGGATTTCTTTGTGAGTACAGTCGATCCATTGAAAGAACCACCCTTGATCACTGCCAACACTGTGCTTTCCATTCTTGCGGTTGACTACCCTGTGGAGAAAGTTTCCTGCTATGTGTCTGATGACGGTGCTGCAATGCTTTCTTTTGAATCTCTCGTAGAAACATCTGAATTTGCAAGAAGGTGGGTTCCATTCTGCAAAAAATTCTCGATTGAACCACGTGCACCTGAGTTCTACTTCTCACAGAAGATTGACTACTTGAAGGATAAAGTGCAACCATCTTTCGTGAAGGAGCGCAGAGCAATGAAAAGAGACTATGAGGAGTTCAAGGTGAGAATGAATGCTTTGGTAGCAAAGGCTCAAAAGACACCAGAAGATGGCTGGACTATGCAAGATGGAACACCTTGGCCAGGAAATAACTCACGTGACCATCCTGGAATGATCCAGGTTTTTCTTGGACACAGCGGTGCCCTTGATATTGAGGGAAATGAGCTTCCTCGGTTGGTTTATGTCTCCAGAGAGAAAAGACCTGGGTACCAACACCACAAGAAAGCTGGTGCTGAAAATGCCCTGGTAAGGGTGTCTGCAGTTCTCACAAATGCCCCATACATCCTTAATCTCGATTGTGATCATTACCTTAACAACAGCCAAGCAATTCGTGAGGCAATGTGCTTCTTAATGGACCCGCAAGTTGGTAGAAATTTATGTTATGTGCAGTTTCCTCAGAGATTTGATGGCATTGATCGAAGTGACAGATATGCCAATCGCAATACAGTTTTCTTTGATGTTAACATGAAAGGCCTGGATGGTATCCAAGGGCCAGTATATGTGGGGACAGGTTGTTGCTTCAATAGGCAGGCACTTTATGGCTATAGTCCTCCTTCTATGCCAAGCTTACCCAAGTCGTCGTCCTCATCCTGTTCTTGGTGTGGCTGCTTCTCTTGTTGCTGCCCCTCTAAGAAGCAAGATCTATCAGAGGTCTACCGCGATGCAAAAAGAGAGGAGCTTGATGCTGCTATATTCAATCTCAGGGAAATTGATAGCTATGATGAGCATGAGAGGTCAATGTTGATGTCCCAGACGAGTTTTGAGAAAACTTTTGGCTTATCAACTGTATTTATAGAGTCTACACTAATGGAGTATGGAGGAGTCGCTGAATCTTCCAACCCATCATTATTGATCAAGGAGGCAATTCATGTCATTAGCTGTGGTTATGAAGAGAAGACTGCATGGGGAAAAGAGATTGGTTGGATTTATGGATCAGTCACTGAGGATATCTTAACGGGTTTCAAGATGCACTGTCGTGGATGGAGATCAGTTTACTGCATGCCATTGAGGCCTGCATTCAAAGGTTCAGCTCCCATTAATCTTTCTGATCGTTTGCACCAAGTTCTCAGGTGGGCACTTGGATCTGTGGAAATCTTCCTCAGTAGACATTGTCCTCTCTGGTACGGGTTTTCAGGAGGCCGCCTTAAATTGCTTCAGCGCATGGCATACATTAACACCATTGTTTACCCCTTCACATCCCTCCCTCTCATCGCTTATTGTTCACTACCTGCAATATGCCTTCTCACAGGAAAATTCATCATCCCAACACTTTCGAATCTAGCAAGTGTTCTGTTTCTTGGCCTCTTCATCTCCATCATTCTCACTAGTGTGATTGAGTTGCGATGGAGTGGTGTCAGCATCCAAGACTTGTGGCGTAATGAGCAGTTCTGGGTCATAGGAGGTGTTTCAGCCCATCTCTTTGCTGTCTTCCAAGGTTTTCTTAAGATGTTAGCTGGTGTGGACACCAACTTCACCGTCACGGCTAAAGCAGCCGAGGATGCAGAGTTTGGAGAGCTCTATATGATCAAATGGACTACACTTCTGATTCCCCCAACTACACTCCTCATTGTGAACATGGTTGGTGTTGTTGCTGGATTTTCTGATGCACTAAACAAAGGTTATGAAGCTTGGGGGCCACTATTTGGCAAGGTTTTCTTTGCCTTCTGGGTGATTCTTCATCTCTATCCATTCCTCAAAGGTCTAATGGGACGCCAAAACCGGACTCCAACCATTGTTGTCATGTGGTCAATTCTGTTGGCCTCTGTCTTCTCTCTTGTTTGGGTCAGGATAAATCCATTCGTGAGCAAAAATGATAACTCATCCCTTGCTTCAGGCTGCATTTCCATCGACTGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0006950 GO:0006952 GO:0006970 GO:0007049 GO:0008150 GO:0008152 GO:0008194 GO:0009058 GO:0009059 GO:0009250 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009832 GO:0009833 GO:0009834 GO:0009987 GO:0010035 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0016760 GO:0022402 GO:0030243 GO:0030244 GO:0030312 GO:0033692 GO:0034637 GO:0034645 GO:0035251 GO:0042221 GO:0042546 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0050832 GO:0050896 GO:0051273 GO:0051274 GO:0051301 GO:0051704 GO:0051707 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:0098542 GO:1901576 GO:1901700 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt WD40 zf-UDP

Protein Analysis

978

Amino Acids

110.01

Weight (kDa)

6.43

Isoelectric Point (pI)

44.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cellulose_synt	PF03552	176 - 893	0.0	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0010642)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G18780
fragaria_vesca	FvH4_3g07420 FvH4_3g07420
malus_domestica	MD05G1296600.v1.1 MD10G1276500.v1.1
prunus_persica	Prupe.4G065700_v2.0.a1 Prupe.4G065700_v2.0.a1
pyrus_communis	pycom05g27510 pycom10g23090
rosa_chinensis	RchiOBHm_Chr5g0011441
rosa_laevigata	RLG00000031835
rosa_multiflora	Rmu_co8341655.1_g000001 Rmu_sc0009001.1_g000001
rosa_roxburghii	Rroxscaffold_1G00065000
rosa_rugosa	Rorug04G0457000
rosa_samantha	Rh5AG088900 Rh5BG084100 Rh5CG097600 Rh5DG084100
rosa_wichuraiana	Rw5G007740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	521
Acc36I	ACCTGC	1 cut(s)	2314
Acc65I	GGTACC	1 cut(s)	1284
AccB1I	GGYRCC	2 cut(s)	1217, 1284
AccB7I	CCANNNNNTGG	2 cut(s)	1127, 2720
AccI	GTMKAC	4 cut(s)	290, 1731, 1877, 2182
AccII	CGCG	2 cut(s)	532, 1737
AciI	CCGC	6 cut(s)	461, 830, 1215, 1436, 1735, 2218
AclWI	GGATC	6 cut(s)	27, 660, 770, 1186, 2017, 2167
AcoI	YGGCCR	2 cut(s)	708, 1157
AcsI	RAATTY	5 cut(s)	261, 920, 953, 1450, 2330
AcuI	CTGAAG	4 cut(s)	432, 717, 2216, 2892
AcvI	CACGTG	2 cut(s)	971, 1175
AcyI	GRCGYC	1 cut(s)	2788
AfaI	GTAC	4 cut(s)	43, 769, 1286, 2201
AfiI	CCNNNNNNNGG	7 cut(s)	1127, 1160, 1326, 1327, 1442, 1674, 2720
AflII	CTTAAG	1 cut(s)	2519
AflIII	ACRYGT	1 cut(s)	274
AhlI	ACTAGT	1 cut(s)	2402
AjnI	CCWGG	6 cut(s)	1159, 1183, 1194, 1279, 1320, 1551
AleI	CACNNNNGTG	3 cut(s)	1215, 2052, 2405
Alw21I	GWGCWC	2 cut(s)	976, 2595
Alw26I	GTCTC	4 cut(s)	554, 675, 1056, 1267
Alw44I	GTGCAC	1 cut(s)	972
AlwI	GGATC	6 cut(s)	27, 660, 770, 1186, 2017, 2167
AlwNI	CAGNNNCTG	3 cut(s)	45, 458, 2018
AoxI	GGCC	9 cut(s)	708, 1157, 1549, 1568, 2087, 2215, 2377, 2711, 2835
ApaLI	GTGCAC	1 cut(s)	972
ApeKI	GCWGC	8 cut(s)	427, 458, 881, 1683, 1698, 1763, 2567, 2913
ApoI	RAATTY	5 cut(s)	261, 920, 953, 1450, 2330
AseI	ATTAAT	1 cut(s)	2115
Asp718I	GGTACC	1 cut(s)	1284
AspLEI	GCGC	4 cut(s)	141, 391, 1047, 2238
AspS9I	GGNCC	3 cut(s)	1432, 1568, 2711
AsuHPI	GGTGA	5 cut(s)	62, 740, 1093, 2542, 2758
AsuII	TTCGAA	2 cut(s)	717, 2351
AsuNHI	GCTAGC	1 cut(s)	742
AvaII	GGWCC	1 cut(s)	1432
AxyI	CCTNAGG	3 cut(s)	12, 249, 393
BaeGI	GKGCMC	3 cut(s)	976, 1222, 2155
BaeI	ACNNNNGTAYC	4 cut(s)	189, 222, 1268, 1301
BalI	TGGCCA	1 cut(s)	1159
BanI	GGYRCC	2 cut(s)	1217, 1284
BanII	GRGCYC	1 cut(s)	2595
BarI	GAAGNNNNNNTAC	2 cut(s)	989, 1021
BbrPI	CACGTG	2 cut(s)	971, 1175
BbsI	GAAGAC	4 cut(s)	185, 1979, 2497, 2836
Bbv12I	GWGCWC	2 cut(s)	976, 2595
BbvI	GCAGC	8 cut(s)	439, 445, 868, 1670, 1685, 1750, 2579, 2900
BceAI	ACGGC	2 cut(s)	75, 2574
BcgI	CGANNNNNNTGC	1 cut(s)	2905
BciT130I	CCWGG	6 cut(s)	1161, 1185, 1196, 1281, 1322, 1553
BciVI	GTATCC	1 cut(s)	1571
BclI	TGATCA	5 cut(s)	537, 798, 1378, 1929, 2601
BcoDI	GTCTC	4 cut(s)	554, 675, 1056, 1267
BcuI	ACTAGT	1 cut(s)	2402
BfaI	CTAG	4 cut(s)	270, 743, 2357, 2403
BfmI	CTRYAG	3 cut(s)	291, 1335, 1621
BfrI	CTTAAG	1 cut(s)	2519
BfuAI	ACCTGC	1 cut(s)	2314
BfuI	GTATCC	1 cut(s)	1571
BglI	GCCNNNNNGGC	1 cut(s)	2086
BglII	AGATCT	2 cut(s)	624, 1717
BisI	GCNGC	9 cut(s)	428, 459, 882, 1684, 1699, 1764, 2218, 2568, 2914
BlpI	GCTNAGC	1 cut(s)	189
BlsI	GCNGC	9 cut(s)	429, 460, 883, 1685, 1700, 1765, 2219, 2569, 2915
Bme1390I	CCNGG	6 cut(s)	1161, 1185, 1196, 1281, 1322, 1553
Bme18I	GGWCC	1 cut(s)	1432
BmgT120I	GGNCC	3 cut(s)	1432, 1568, 2711
BmiI	GGNNCC	6 cut(s)	465, 939, 1219, 1286, 1434, 2712
BmrFI	CCNGG	6 cut(s)	1161, 1185, 1196, 1281, 1322, 1553
BmtI	GCTAGC	1 cut(s)	746
BpiI	GAAGAC	4 cut(s)	185, 1979, 2497, 2836
BpmI	CTGGAG	2 cut(s)	657, 1249
Bpu10I	CCTNAGC	1 cut(s)	423
Bpu1102I	GCTNAGC	1 cut(s)	189
Bpu14I	TTCGAA	2 cut(s)	717, 2351
BsaAI	YACGTR	2 cut(s)	971, 1175
BsaBI	GATNNNNATC	2 cut(s)	1377, 2062
BsaHI	GRCGYC	1 cut(s)	2788
BsaI	GGTCTC	2 cut(s)	554, 675
BsaJI	CCNNGG	7 cut(s)	1154, 1247, 1280, 1320, 1564, 2509, 2571
BsaWI	WCCGGW	1 cut(s)	2796
Bsc4I	CCNNNNNNNGG	7 cut(s)	1127, 1160, 1326, 1327, 1442, 1674, 2720
Bse1I	ACTGG	3 cut(s)	189, 674, 1571
Bse21I	CCTNAGG	3 cut(s)	12, 249, 393
Bse3DI	GCAATG	3 cut(s)	891, 1059, 1422
Bse8I	GATNNNNATC	2 cut(s)	1377, 2062
BseBI	CCWGG	6 cut(s)	1161, 1185, 1196, 1281, 1322, 1553
BseDI	CCNNGG	7 cut(s)	1154, 1247, 1280, 1320, 1564, 2509, 2571
BseJI	GATNNNNATC	2 cut(s)	1377, 2062
BseLI	CCNNNNNNNGG	7 cut(s)	1127, 1160, 1326, 1327, 1442, 1674, 2720
BseMI	GCAATG	3 cut(s)	891, 1059, 1422
BseMII	CTCAG	9 cut(s)	180, 414, 752, 969, 1487, 1792, 2010, 2158, 2191
BseNI	ACTGG	3 cut(s)	189, 674, 1571
BseRI	GAGGAG	5 cut(s)	29, 1085, 1766, 1911, 2630
BseSI	GKGCMC	3 cut(s)	976, 1222, 2155
BseXI	GCAGC	8 cut(s)	439, 445, 868, 1670, 1685, 1750, 2579, 2900
BsgI	GTGCAG	1 cut(s)	1484
Bsh1236I	CGCG	2 cut(s)	532, 1737
BshFI	GGCC	9 cut(s)	710, 1159, 1551, 1570, 2089, 2217, 2379, 2713, 2837
BshNI	GGYRCC	2 cut(s)	1217, 1284
BsiHKAI	GWGCWC	2 cut(s)	976, 2595
BsiSI	CCGG	1 cut(s)	2797
BslFI	GGGAC	3 cut(s)	1597, 1810, 2799
BslI	CCNNNNNNNGG	7 cut(s)	1127, 1160, 1326, 1327, 1442, 1674, 2720
BsmAI	GTCTC	4 cut(s)	554, 675, 1056, 1267
BsmFI	GGGAC	3 cut(s)	1597, 1810, 2799
BsmI	GAATGC	2 cut(s)	1096, 2093
BsnI	GGCC	9 cut(s)	710, 1159, 1551, 1570, 2089, 2217, 2379, 2713, 2837
Bso31I	GGTCTC	2 cut(s)	554, 675
Bsp119I	TTCGAA	2 cut(s)	717, 2351
Bsp1286I	GDGCHC	4 cut(s)	976, 1222, 2155, 2595
Bsp1720I	GCTNAGC	1 cut(s)	189
BspACI	CCGC	6 cut(s)	461, 830, 1215, 1436, 1735, 2218
BspANI	GGCC	9 cut(s)	710, 1159, 1551, 1570, 2089, 2217, 2379, 2713, 2837
BspFNI	CGCG	2 cut(s)	532, 1737
BspLI	GGNNCC	6 cut(s)	465, 939, 1219, 1286, 1434, 2712
BspMAI	CTGCAG	1 cut(s)	1339
BspMI	ACCTGC	1 cut(s)	2314
BspOI	GCTAGC	1 cut(s)	746
BspPI	GGATC	6 cut(s)	27, 660, 770, 1186, 2017, 2167
BspT104I	TTCGAA	2 cut(s)	717, 2351
BspT107I	GGYRCC	2 cut(s)	1217, 1284
BspTI	CTTAAG	1 cut(s)	2519
BspTNI	GGTCTC	2 cut(s)	554, 675
BsrDI	GCAATG	3 cut(s)	891, 1059, 1422
BsrI	ACTGG	3 cut(s)	189, 674, 1571
BssECI	CCNNGG	7 cut(s)	1154, 1247, 1280, 1320, 1564, 2509, 2571
BssNI	GRCGYC	1 cut(s)	2788
BssT1I	CCWWGG	3 cut(s)	1154, 1564, 2509
Bst2UI	CCWGG	6 cut(s)	1161, 1185, 1196, 1281, 1322, 1553
Bst6I	CTCTTC	3 cut(s)	557, 1962, 2387
BstACI	GRCGYC	1 cut(s)	2788
BstAFI	CTTAAG	1 cut(s)	2519
BstAPI	GCANNNNNTGC	1 cut(s)	147
BstBAI	YACGTR	2 cut(s)	971, 1175
BstBI	TTCGAA	2 cut(s)	717, 2351
BstC8I	GCNNGC	6 cut(s)	79, 152, 744, 1608, 2078, 2091
BstENI	CCTNNNNNAGG	1 cut(s)	1158
BstFNI	CGCG	2 cut(s)	532, 1737
BstHHI	GCGC	4 cut(s)	141, 391, 1047, 2238
BstMAI	GTCTC	4 cut(s)	554, 675, 1056, 1267
BstNI	CCWGG	6 cut(s)	1161, 1185, 1196, 1281, 1322, 1553
BstNSI	RCATGY	2 cut(s)	278, 2080
BstSCI	CCNGG	6 cut(s)	1159, 1183, 1194, 1279, 1320, 1551
BstSFI	CTRYAG	3 cut(s)	291, 1335, 1621
BstSLI	GKGCMC	3 cut(s)	976, 1222, 2155
BstUI	CGCG	2 cut(s)	532, 1737
BstV1I	GCAGC	8 cut(s)	439, 445, 868, 1670, 1685, 1750, 2579, 2900
BstV2I	GAAGAC	4 cut(s)	185, 1979, 2497, 2836
BstX2I	RGATCY	3 cut(s)	624, 1717, 2159
BstYI	RGATCY	3 cut(s)	624, 1717, 2159
Bsu36I	CCTNAGG	3 cut(s)	12, 249, 393
BsuI	GTATCC	1 cut(s)	1571
BsuRI	GGCC	9 cut(s)	710, 1159, 1551, 1570, 2089, 2217, 2379, 2713, 2837
BtgZI	GCGATG	3 cut(s)	1752, 2272, 2434
BtsI	GCAGTG	3 cut(s)	161, 162, 801
BtsIMutI	CAGTG	9 cut(s)	161, 162, 182, 282, 300, 801, 810, 2016, 2047
BveI	ACCTGC	1 cut(s)	2314
Cac8I	GCNNGC	6 cut(s)	79, 152, 744, 1608, 2078, 2091
CaiI	CAGNNNCTG	3 cut(s)	45, 458, 2018
CfoI	GCGC	4 cut(s)	141, 391, 1047, 2238
Cfr13I	GGNCC	3 cut(s)	1432, 1568, 2711
CseI	GACGC	1 cut(s)	2796
Csp6I	GTAC	4 cut(s)	42, 768, 1285, 2200
CspCI	CAANNNNNGTGG	2 cut(s)	2429, 2464
CviQI	GTAC	4 cut(s)	42, 768, 1285, 2200
EaeI	YGGCCR	2 cut(s)	708, 1157
Eam1104I	CTCTTC	3 cut(s)	557, 1962, 2387
EarI	CTCTTC	3 cut(s)	557, 1962, 2387
Ecl136II	GAGCTC	1 cut(s)	2593
Eco130I	CCWWGG	3 cut(s)	1154, 1564, 2509
Eco147I	AGGCCT	2 cut(s)	1551, 2089
Eco24I	GRGCYC	1 cut(s)	2595
Eco31I	GGTCTC	2 cut(s)	554, 675
Eco32I	GATATC	1 cut(s)	2026
Eco47I	GGWCC	1 cut(s)	1432
Eco53kI	GAGCTC	1 cut(s)	2593
Eco57I	CTGAAG	4 cut(s)	432, 717, 2216, 2892
Eco72I	CACGTG	2 cut(s)	971, 1175
Eco81I	CCTNAGG	3 cut(s)	12, 249, 393
EcoICRI	GAGCTC	1 cut(s)	2593
EcoNI	CCTNNNNNAGG	1 cut(s)	1158
EcoRI	GAATTC	1 cut(s)	261
EcoRII	CCWGG	6 cut(s)	1159, 1183, 1194, 1279, 1320, 1551
EcoRV	GATATC	1 cut(s)	2026
EcoT14I	CCWWGG	3 cut(s)	1154, 1564, 2509
EcoT38I	GRGCYC	1 cut(s)	2595
ErhI	CCWWGG	3 cut(s)	1154, 1564, 2509
FalI	AAGNNNNNCTT	6 cut(s)	134, 166, 2502, 2534, 2717, 2749
FaqI	GGGAC	3 cut(s)	1597, 1810, 2799
FauI	CCCGC	1 cut(s)	1443
FbaI	TGATCA	5 cut(s)	537, 798, 1378, 1929, 2601
FblI	GTMKAC	4 cut(s)	290, 1731, 1877, 2182
Fnu4HI	GCNGC	9 cut(s)	428, 459, 882, 1684, 1699, 1764, 2218, 2568, 2914
FriOI	GRGCYC	1 cut(s)	2595
Fsp4HI	GCNGC	9 cut(s)	428, 459, 882, 1684, 1699, 1764, 2218, 2568, 2914
FspBI	CTAG	4 cut(s)	270, 743, 2357, 2403
GlaI	GCGC	4 cut(s)	140, 390, 1046, 2237
GluI	GCNGC	9 cut(s)	428, 459, 882, 1684, 1699, 1764, 2218, 2568, 2914
GsuI	CTGGAG	2 cut(s)	657, 1249
HaeIII	GGCC	9 cut(s)	710, 1159, 1551, 1570, 2089, 2217, 2379, 2713, 2837
HapII	CCGG	1 cut(s)	2797
HgaI	GACGC	1 cut(s)	2796
HhaI	GCGC	4 cut(s)	141, 391, 1047, 2238
Hin1I	GRCGYC	1 cut(s)	2788
Hin6I	GCGC	4 cut(s)	139, 389, 1045, 2236
HinP1I	GCGC	4 cut(s)	139, 389, 1045, 2236
HincII	GTYRAC	2 cut(s)	835, 1540
HindII	GTYRAC	2 cut(s)	835, 1540
HindIII	AAGCTT	2 cut(s)	1642, 2703
HpaI	GTTAAC	1 cut(s)	1540
HpaII	CCGG	1 cut(s)	2797
HphI	GGTGA	5 cut(s)	62, 740, 1093, 2542, 2758
Hpy188I	TCNGA	7 cut(s)	871, 919, 1476, 1726, 2125, 2622, 2680
Hpy99I	CGWCG	1 cut(s)	1660
HpyAV	CCTTC	9 cut(s)	352, 744, 924, 1006, 1033, 1641, 2278, 2327, 2749
HpyCH4IV	ACGT	2 cut(s)	970, 1174
HpySE526I	ACGT	2 cut(s)	970, 1174
Hsp92I	GRCGYC	1 cut(s)	2788
HspAI	GCGC	4 cut(s)	139, 389, 1045, 2236
KpnI	GGTACC	1 cut(s)	1288
Ksp22I	TGATCA	5 cut(s)	537, 798, 1378, 1929, 2601
KspAI	GTTAAC	1 cut(s)	1540
LmnI	GCTCC	4 cut(s)	751, 1042, 1753, 2113
Lsp1109I	GCAGC	8 cut(s)	439, 445, 868, 1670, 1685, 1750, 2579, 2900
MaeI	CTAG	4 cut(s)	270, 743, 2357, 2403
MaeII	ACGT	2 cut(s)	970, 1174
MaeIII	GTNAC	5 cut(s)	568, 1175, 1499, 2014, 2554
MflI	RGATCY	3 cut(s)	624, 1717, 2159
MhlI	GDGCHC	4 cut(s)	976, 1222, 2155, 2595
MlsI	TGGCCA	1 cut(s)	1159
MluNI	TGGCCA	1 cut(s)	1159
MlyI	GAGTC	4 cut(s)	576, 1883, 1908, 2794
MmeI	TCCRAC	6 cut(s)	238, 335, 630, 1938, 1979, 2828
Mox20I	TGGCCA	1 cut(s)	1159
MscI	TGGCCA	1 cut(s)	1159
MslI	CAYNNNNRTG	3 cut(s)	1215, 2052, 2405
Msp20I	TGGCCA	1 cut(s)	1159
MspA1I	CMGCKG	1 cut(s)	1215
MspCI	CTTAAG	1 cut(s)	2519
MspI	CCGG	1 cut(s)	2797
MspR9I	CCNGG	6 cut(s)	1161, 1185, 1196, 1281, 1322, 1553
Mva1269I	GAATGC	2 cut(s)	1096, 2093
MvaI	CCWGG	6 cut(s)	1161, 1185, 1196, 1281, 1322, 1553
MvnI	CGCG	2 cut(s)	532, 1737
NheI	GCTAGC	1 cut(s)	742
NlaIV	GGNNCC	6 cut(s)	465, 939, 1219, 1286, 1434, 2712
NmeAIII	GCCGAG	1 cut(s)	2596
NmuCI	GTSAC	5 cut(s)	568, 1175, 1499, 2014, 2554
NspI	RCATGY	2 cut(s)	278, 2080
NspV	TTCGAA	2 cut(s)	717, 2351
OliI	CACNNNNGTG	3 cut(s)	1215, 2052, 2405
PaeI	GCATGC	1 cut(s)	2080
PceI	AGGCCT	2 cut(s)	1551, 2089
PciI	ACATGT	1 cut(s)	274
PctI	GAATGC	2 cut(s)	1096, 2093
PflFI	GACNNNGTC	1 cut(s)	2187
PflMI	CCANNNNNTGG	2 cut(s)	1127, 2720
PfoI	TCCNGGA	1 cut(s)	1183
PkrI	GCNGC	9 cut(s)	429, 460, 883, 1685, 1700, 1765, 2219, 2569, 2915
PleI	GAGTC	4 cut(s)	575, 1882, 1907, 2794
PmaCI	CACGTG	2 cut(s)	971, 1175
PmlI	CACGTG	2 cut(s)	971, 1175
PpsI	GAGTC	4 cut(s)	575, 1882, 1907, 2794
Ppu21I	YACGTR	2 cut(s)	971, 1175
PscI	ACATGT	1 cut(s)	274
PshBI	ATTAAT	1 cut(s)	2115
PsiI	TTATAA	1 cut(s)	521
Psp124BI	GAGCTC	1 cut(s)	2595
Psp6I	CCWGG	6 cut(s)	1159, 1183, 1194, 1279, 1320, 1551
PspCI	CACGTG	2 cut(s)	971, 1175
PspGI	CCWGG	6 cut(s)	1159, 1183, 1194, 1279, 1320, 1551
PspN4I	GGNNCC	6 cut(s)	465, 939, 1219, 1286, 1434, 2712
PspPI	GGNCC	3 cut(s)	1432, 1568, 2711
PstI	CTGCAG	1 cut(s)	1339
PstNI	CAGNNNCTG	3 cut(s)	45, 458, 2018
PsuI	RGATCY	3 cut(s)	624, 1717, 2159
PsyI	GACNNNGTC	1 cut(s)	2187
RsaI	GTAC	4 cut(s)	43, 769, 1286, 2201
RsaNI	GTAC	4 cut(s)	42, 768, 1285, 2200
RseI	CAYNNNNRTG	3 cut(s)	1215, 2052, 2405
SacI	GAGCTC	1 cut(s)	2595
SatI	GCNGC	9 cut(s)	428, 459, 882, 1684, 1699, 1764, 2218, 2568, 2914
Sau96I	GGNCC	3 cut(s)	1432, 1568, 2711
SchI	GAGTC	4 cut(s)	576, 1883, 1908, 2794
ScrFI	CCNGG	6 cut(s)	1161, 1185, 1196, 1281, 1322, 1553
SduI	GDGCHC	4 cut(s)	976, 1222, 2155, 2595
SfcI	CTRYAG	3 cut(s)	291, 1335, 1621
SfuI	TTCGAA	2 cut(s)	717, 2351
SinI	GGWCC	1 cut(s)	1432
SmiMI	CAYNNNNRTG	3 cut(s)	1215, 2052, 2405
SmlI	CTYRAG	1 cut(s)	2519
SmoI	CTYRAG	1 cut(s)	2519
SpeI	ACTAGT	1 cut(s)	2402
SphI	GCATGC	1 cut(s)	2080
SseBI	AGGCCT	2 cut(s)	1551, 2089
SsiI	CCGC	6 cut(s)	461, 830, 1215, 1436, 1735, 2218
SspMI	CTAG	4 cut(s)	270, 743, 2357, 2403
SstI	GAGCTC	1 cut(s)	2595
StuI	AGGCCT	2 cut(s)	1551, 2089
StyD4I	CCNGG	6 cut(s)	1159, 1183, 1194, 1279, 1320, 1551
StyI	CCWWGG	3 cut(s)	1154, 1564, 2509
TaiI	ACGT	2 cut(s)	973, 1177
TatI	WGTACW	1 cut(s)	767
TauI	GCSGC	1 cut(s)	2220
TscAI	CASTG	9 cut(s)	161, 169, 189, 289, 300, 808, 817, 2023, 2054
TseFI	GTSAC	5 cut(s)	568, 1175, 1499, 2014, 2554
TseI	GCWGC	8 cut(s)	427, 458, 881, 1683, 1698, 1763, 2567, 2913
Tsp45I	GTSAC	5 cut(s)	568, 1175, 1499, 2014, 2554
TspRI	CASTG	9 cut(s)	161, 169, 189, 289, 300, 808, 817, 2023, 2054
Tth111I	GACNNNGTC	1 cut(s)	2187
Van91I	CCANNNNNTGG	2 cut(s)	1127, 2720
Vha464I	CTTAAG	1 cut(s)	2519
VneI	GTGCAC	1 cut(s)	972
VpaK11BI	GGWCC	1 cut(s)	1432
VspI	ATTAAT	1 cut(s)	2115
XagI	CCTNNNNNAGG	1 cut(s)	1158
XapI	RAATTY	5 cut(s)	261, 920, 953, 1450, 2330
XceI	RCATGY	2 cut(s)	278, 2080
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1128, 1202, 1301
XmiI	GTMKAC	4 cut(s)	290, 1731, 1877, 2182
XspI	CTAG	4 cut(s)	270, 743, 2357, 2403

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.