Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0010642

Physical Location & Seq

Genomic Coordinates Forward (+)

43091799 .. 43097192

Gene Structure 5394 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1296600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2832 bp

ATGATGCAGTCCGTTGCTCCTCTATGCAATGCCTGCGGCGAGCAGGTGGGGCTTGATGCTAATGGGGAGATTTTCGTGGCGTGCCACGAGTGTAATTTCCCCGTTTGCAAGGCTTGTTTTGATGATGATGTCAAGGCCGGGCGTAAATTTTGCTTAAAGTGTGGCATTCCCTATGACGATAGCTCGTTGGCGGACTATGAAACAAAGGTGTCTGGCACTCGATCCACAATGGAAGCTCACCTGAATAGTTCTCAGGATACCGGAATTCATGCTAGGCATATCAGCAGTGTGTCTACACTGGATAGTGAATTAAACGACGACTATGGCAATCCAATTTGGAAGAACAGAGTGGAGAGTTGGAAGGATAAGAAGGATAAAAAGAGCAAGAAGAAAAAGGATGCGCCTAAGGTGGAAAAAGAGGCTCAAATTCCACCTGAGCAGCAGATGACAGGGGAATATTCATCAGAGGCTGCGGAACCACTTTCAACTGTCGTTCCACTTCCACCAAACAGAATCACACCATACAGAATTGTAATAATTATGCGATTGATCATTCTTGCCCTTTTCTTCCATTATCGAGTAACAAATCCTGTTGATAGCGCTTATGGTCTATGGTTCACTTCTATCATATGTGAGATCTGGTTCGCTTTTTCTTGGGTGCTGGATCAGTTTCCCAAGTGGTCTCCAGTTAATCGGATTACATTTACTGATAGGTTATCTGCCAGGTTTGAAAGAGAGGGTGAACCCTCCGAGCTTGCTGCAGTGGATTTCTTCGTGAGTACAGTTGATCCGTTGAAAGAACCGCCCCTGATCACTGCCAATACCGTGCTTTCTATCCTTGCCGTAGACTACCCCGTGGATAAAGTTTCCTGCTATGTGTCTGATGATGGTGCTGCCATGCTTACTTTTGAATCTCTTGCCGAGACATCTGAATTTGCAAGGAAGTGGGTACCATTCTGCAAGAATTTTTCGATTGAACCACGTGCACCTGAGTTTTACTTCTCACAAAAGATTGACTACTTGAAGGATAAAGTGCAACCATCTTTTGTGAAGGAGCGCAGAGCGATGAAAAGAGATTATGAAGAATTCAAAGTGCGAATGAATGCTTTAGTTGCAAAGGCTCAAAAAACACCAGAAGAAGGATGGACTATGCAAGACGGAACACCTTGGCCAGGAAATAACCCACGGGACCATCCCGGAATGATTCAGGTTTTCCTTGGACACAGTGGCGCTTATGACATCGAGGGAAATGAACTTCCTCGATTGGTTTACGTCTCGAGAGAGAAGAGACCCGGCTATCCACATCACAAGAAAGCTGGTGCCGAAAATGCACTGGTAAGGGTGTCTGCAGTTCTCACAAATGCCCCATACATCCTCAATCTTGACTGCGATCACTACGTTAACAACAGCCAGGCAATTCGTGAGGCAATGTGTTTCTTGATGGACCCGCAAGTTGGTCGAGAAGTATGCTATGTGCAGTTTCCTCAGAGGTTCGATGGCATTGATCGCAGTGATCGATATGCCAACCGCAACACAGTTTTCTTTGATGTTAACATGAAAGGACTGGATGGAATTCAAGGTCCAGTATATGTGGGGACAGGATGTTGTTTCAATAGGCAAGCACTTTACGGCTACGGTCCTCCTTCTATGCCCACCTTACCCAAGGCTGCTTCCTCATCCTCCTGCTCATGGTGTGGTTGCTGCCCCTCTAAGAAGCCGTCGAAAGATCTGTCAGAGGCTTACCGAGATGCAAAACGCGAGGAGCTTGATGCTGCCATATTCAACCTCCGGGAGATTGAGAACTATGATGAGTTTGAGAGGTCAATGTTGATCTCGCAGACGAGCTTTGAGAAAACTTTTGGGTTATCATCCGTATTCATAGAGTCTACATTAATGGAGAACGGAGGAGTGGCCGAATCTTCCAACCCATCAACGTTGATCAAGGAGGCAATTCATGTCATTAGCTGCGGTTATGAAGAGAAGACCGCGTGGGGAAAAGAAATTGGTTGGATATATGGATCAATCACGGAGGATATCTTAACTGGTTTCAAGATGCATTGCCGTGGATGGAGGTCAATTTACTGCATGCCCTTGAGGCCTGCATTCAAAGGGTCAGCTCCCATTAACCTTTCTGATCGACTGCACCAAGTTCTTCGGTGGGCACTTGGTTCGGTGGAAATTTTCCTCAGTAGACATTGTCCTCTCTGGTATGGATTTGCAGGAGGCCGCCTCAAACTGCTTCAGAGAATGGCATATATCAACACCATTGTTTACCCCTTCACATCCCTCCCTCTCGTCGCTTACTGTACACTCCCTGCAATATGCCTTCTCACGGGAAAATTCATCATCCCAACACTTACAAACCTGGCAAGTGCCCTGTTTCTTGGCCTCTTCATCTCCATCATTGCTACAAGTGTGCTCGAGTTGCGGTGGAGTGGAGTCCGCATTGAGGATTTATGGCGTAACGAGCAGTTCTGGGTGATCGGAGGTGTTTCAGCCCATCTCTTCGCCGTCTTCCAAGGTTTCTTAAAGATGTTGGCCGGAATTGACACCAACTTCACCGTCACAACCAAATCAGCCGAGGACACAGAATTTGGAGAGCTCTATCTGATCAAATGGACCACACTTTTGATTCCCCCCACTACACTCCTCATTGTCAACATGGTTGGTGTTGTAGCTGGATTTTCGGATGCCCTTAACAAGGGATACGAAGCTTGGGGGCCACTTTTCGGGAAGGTTTTCTTCGCCTTCTGGGTGATTCTTCATCTCTATCCCTTCCTCAAAGGTCTCATGGGACGCCAAAACCGGACTCCAACCATCGTTATTTTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0006950 GO:0006952 GO:0006970 GO:0007049 GO:0008150 GO:0008152 GO:0008194 GO:0009058 GO:0009059 GO:0009250 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009832 GO:0009833 GO:0009834 GO:0009987 GO:0010035 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0016760 GO:0022402 GO:0030243 GO:0030244 GO:0030312 GO:0033692 GO:0034637 GO:0034645 GO:0035251 GO:0042221 GO:0042546 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0050832 GO:0050896 GO:0051273 GO:0051274 GO:0051301 GO:0051704 GO:0051707 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:0098542 GO:1901576 GO:1901700 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt WD40 zf-UDP

Protein Analysis

944

Amino Acids

106.2

Weight (kDa)

6.3

Isoelectric Point (pI)

40.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-UDP	PF14569	5 - 59	6.5e-14	Zinc-binding RING-finger
Cellulose_synt	PF03552	255 - 943	0.0	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010642)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G18780
fragaria_vesca	FvH4_3g07420 FvH4_3g07420
malus_domestica	MD05G1296600.v1.1 MD10G1276500.v1.1
prunus_persica	Prupe.4G065700_v2.0.a1 Prupe.4G065700_v2.0.a1
pyrus_communis	pycom05g27510 pycom10g23090
rosa_chinensis	RchiOBHm_Chr5g0011441
rosa_laevigata	RLG00000031835
rosa_multiflora	Rmu_co8341655.1_g000001 Rmu_sc0009001.1_g000001
rosa_roxburghii	Rroxscaffold_1G00065000
rosa_rugosa	Rorug04G0457000
rosa_samantha	Rh5AG088900 Rh5BG084100 Rh5CG097600 Rh5DG084100
rosa_wichuraiana	Rw5G007740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2830
AarI	CACCTGC	1 cut(s)	34
Acc36I	ACCTGC	1 cut(s)	34
Acc65I	GGTACC	1 cut(s)	949
AccB1I	GGYRCC	2 cut(s)	949, 1319
AccI	GTMKAC	4 cut(s)	293, 846, 1886, 2191
AccII	CGCG	2 cut(s)	1758, 1988
AclI	AACGTT	1 cut(s)	1934
AclWI	GGATC	4 cut(s)	216, 672, 782, 2026
AcoI	YGGCCR	3 cut(s)	1169, 1911, 2538
AcuI	CTGAAG	1 cut(s)	2225
AcvI	CACGTG	1 cut(s)	983
AcyI	GRCGYC	1 cut(s)	2797
AfaI	GTAC	3 cut(s)	781, 951, 2308
AfeI	AGCGCT	1 cut(s)	601
AfiI	CCNNNNNNNGG	8 cut(s)	1139, 1172, 1454, 1689, 2332, 2449, 2701, 2729
AjnI	CCWGG	4 cut(s)	722, 1171, 1410, 2364
Alw21I	GWGCWC	3 cut(s)	988, 2421, 2604
Alw26I	GTCTC	5 cut(s)	687, 917, 1279, 1282, 2792
Alw44I	GTGCAC	1 cut(s)	984
AlwI	GGATC	4 cut(s)	216, 672, 782, 2026
AlwNI	CAGNNNCTG	1 cut(s)	470
Ama87I	CYCGRG	2 cut(s)	1276, 2420
Aor51HI	AGCGCT	1 cut(s)	601
AoxI	GGCC	8 cut(s)	135, 1169, 1911, 2096, 2224, 2386, 2538, 2720
ApaLI	GTGCAC	1 cut(s)	984
ApeKI	GCWGC	8 cut(s)	439, 470, 758, 893, 1667, 1701, 1772, 1965
ArsI	GACNNNNNNTTYG	6 cut(s)	1715, 1747, 2576, 2608, 2611, 2643
AseI	ATTAAT	1 cut(s)	1892
Asp700I	GAANNNNTTC	1 cut(s)	2738
Asp718I	GGTACC	1 cut(s)	949
AspLEI	GCGC	4 cut(s)	403, 602, 1059, 1232
AspS9I	GGNCC	6 cut(s)	1189, 1444, 1580, 1637, 2619, 2720
AsuC2I	CCSGG	4 cut(s)	139, 1197, 1293, 1790
AsuHPI	GGTGA	5 cut(s)	230, 752, 2491, 2551, 2767
AvaI	CYCGRG	2 cut(s)	1276, 2420
AvaII	GGWCC	5 cut(s)	1189, 1444, 1580, 1637, 2619
AxyI	CCTNAGG	1 cut(s)	405
BaeGI	GKGCMC	3 cut(s)	988, 2164, 2377
BalI	TGGCCA	1 cut(s)	1171
BanI	GGYRCC	2 cut(s)	949, 1319
BanII	GRGCYC	1 cut(s)	2604
BauI	CACGAG	1 cut(s)	86
BbrPI	CACGTG	1 cut(s)	983
BbsI	GAAGAC	2 cut(s)	1988, 2506
Bbv12I	GWGCWC	3 cut(s)	988, 2421, 2604
BbvI	GCAGC	8 cut(s)	451, 457, 745, 880, 1654, 1688, 1759, 1952
BceAI	ACGGC	5 cut(s)	827, 1645, 1702, 2046, 2495
BcgI	CGANNNNNNTGC	8 cut(s)	740, 774, 1439, 1449, 1473, 1483, 2151, 2185
BciT130I	CCWGG	4 cut(s)	724, 1173, 1412, 2366
BciVI	GTATCC	2 cut(s)	250, 2699
BclI	TGATCA	4 cut(s)	549, 810, 1938, 2610
BcnI	CCSGG	4 cut(s)	139, 1197, 1293, 1790
BcoDI	GTCTC	5 cut(s)	687, 917, 1279, 1282, 2792
BfaI	CTAG	1 cut(s)	273
BfmI	CTRYAG	2 cut(s)	759, 1347
BfoI	RGCGCY	2 cut(s)	603, 1233
BfuAI	ACCTGC	1 cut(s)	34
BfuI	GTATCC	2 cut(s)	250, 2699
BglI	GCCNNNNNGGC	1 cut(s)	2095
BglII	AGATCT	2 cut(s)	636, 1726
Bme1390I	CCNGG	8 cut(s)	139, 724, 1173, 1197, 1293, 1412, 1790, 2366
Bme18I	GGWCC	5 cut(s)	1189, 1444, 1580, 1637, 2619
BmeT110I	CYCGRG	2 cut(s)	1276, 2420
BmgT120I	GGNCC	6 cut(s)	1189, 1444, 1580, 1637, 2619, 2720
BmiI	GGNNCC	6 cut(s)	477, 951, 1190, 1321, 1446, 2721
BmrFI	CCNGG	8 cut(s)	139, 724, 1173, 1197, 1293, 1412, 1790, 2366
BmsI	GCATC	6 cut(s)	46, 388, 1738, 1759, 2043, 2680
BpiI	GAAGAC	2 cut(s)	1988, 2506
BplI	GAGNNNNNCTC	2 cut(s)	2214, 2246
BpmI	CTGGAG	1 cut(s)	669
Bpu10I	CCTNAGC	1 cut(s)	435
BpuEI	CTTGAG	1 cut(s)	2113
BpuMI	CCSGG	4 cut(s)	139, 1197, 1293, 1790
Bsa29I	ATCGAT	1 cut(s)	1516
BsaAI	YACGTR	1 cut(s)	983
BsaHI	GRCGYC	1 cut(s)	2797
BsaI	GGTCTC	3 cut(s)	687, 1282, 2792
BsaJI	CCNNGG	8 cut(s)	855, 1166, 1184, 1216, 1662, 2062, 2518, 2580
BsaWI	WCCGGW	2 cut(s)	260, 2805
Bsc4I	CCNNNNNNNGG	8 cut(s)	1139, 1172, 1454, 1689, 2332, 2449, 2701, 2729
Bse1I	ACTGG	6 cut(s)	303, 686, 1338, 1569, 1583, 2047
Bse21I	CCTNAGG	1 cut(s)	405
Bse3DI	GCAATG	4 cut(s)	34, 1434, 2056, 2403
BseBI	CCWGG	4 cut(s)	724, 1173, 1412, 2366
BseCI	ATCGAT	1 cut(s)	1516
BseDI	CCNNGG	8 cut(s)	855, 1166, 1184, 1216, 1662, 2062, 2518, 2580
BseLI	CCNNNNNNNGG	8 cut(s)	1139, 1172, 1454, 1689, 2332, 2449, 2701, 2729
BseMI	GCAATG	4 cut(s)	34, 1434, 2056, 2403
BseMII	CTCAG	5 cut(s)	266, 426, 981, 1499, 2200
BseNI	ACTGG	6 cut(s)	303, 686, 1338, 1569, 1583, 2047
BseRI	GAGGAG	4 cut(s)	9, 1775, 1920, 2639
BseSI	GKGCMC	3 cut(s)	988, 2164, 2377
BseXI	GCAGC	8 cut(s)	451, 457, 745, 880, 1654, 1688, 1759, 1952
BsgI	GTGCAG	2 cut(s)	1496, 2126
Bsh1236I	CGCG	2 cut(s)	1758, 1988
BshFI	GGCC	8 cut(s)	137, 1171, 1913, 2098, 2226, 2388, 2540, 2722
BshNI	GGYRCC	2 cut(s)	949, 1319
BshVI	ATCGAT	1 cut(s)	1516
BsiHKAI	GWGCWC	3 cut(s)	988, 2421, 2604
BsiHKCI	CYCGRG	2 cut(s)	1276, 2420
BsiSI	CCGG	7 cut(s)	138, 261, 1197, 1293, 1789, 2541, 2806
BslFI	GGGAC	3 cut(s)	1202, 1609, 2808
BslI	CCNNNNNNNGG	8 cut(s)	1139, 1172, 1454, 1689, 2332, 2449, 2701, 2729
BsmAI	GTCTC	5 cut(s)	687, 917, 1279, 1282, 2792
BsmBI	CGTCTC	1 cut(s)	1279
BsmFI	GGGAC	3 cut(s)	1202, 1609, 2808
BsmI	GAATGC	3 cut(s)	165, 1108, 2102
BsnI	GGCC	8 cut(s)	137, 1171, 1913, 2098, 2226, 2388, 2540, 2722
Bso31I	GGTCTC	3 cut(s)	687, 1282, 2792
BsoBI	CYCGRG	2 cut(s)	1276, 2420
Bsp1286I	GDGCHC	5 cut(s)	988, 2164, 2377, 2421, 2604
Bsp1407I	TGTACA	1 cut(s)	2306
BspANI	GGCC	8 cut(s)	137, 1171, 1913, 2098, 2226, 2388, 2540, 2722
BspCNI	CTCAG	5 cut(s)	265, 427, 982, 1498, 2199
BspDI	ATCGAT	1 cut(s)	1516
BspFNI	CGCG	2 cut(s)	1758, 1988
BspLI	GGNNCC	6 cut(s)	477, 951, 1190, 1321, 1446, 2721
BspMAI	CTGCAG	2 cut(s)	763, 1351
BspMI	ACCTGC	1 cut(s)	34
BspPI	GGATC	4 cut(s)	216, 672, 782, 2026
BspT107I	GGYRCC	2 cut(s)	949, 1319
BspTNI	GGTCTC	3 cut(s)	687, 1282, 2792
BsrDI	GCAATG	4 cut(s)	34, 1434, 2056, 2403
BsrGI	TGTACA	1 cut(s)	2306
BsrI	ACTGG	6 cut(s)	303, 686, 1338, 1569, 1583, 2047
BssECI	CCNNGG	8 cut(s)	855, 1166, 1184, 1216, 1662, 2062, 2518, 2580
BssNI	GRCGYC	1 cut(s)	2797
BssSI	CACGAG	1 cut(s)	86
BssT1I	CCWWGG	4 cut(s)	1166, 1216, 1662, 2518
Bst2BI	CACGAG	1 cut(s)	86
Bst2UI	CCWGG	4 cut(s)	724, 1173, 1412, 2366
Bst4CI	ACNGT	8 cut(s)	490, 784, 826, 1226, 1537, 1637, 2306, 2563
Bst6I	CTCTTC	4 cut(s)	1280, 1971, 2396, 2510
BstACI	GRCGYC	1 cut(s)	2797
BstAPI	GCANNNNNTGC	1 cut(s)	33
BstAUI	TGTACA	1 cut(s)	2306
BstBAI	YACGTR	1 cut(s)	983
BstC8I	GCNNGC	7 cut(s)	34, 41, 82, 756, 1620, 2087, 2100
BstDEI	CTNAG	7 cut(s)	252, 405, 435, 990, 1485, 1710, 2186
BstDSI	CCRYGG	3 cut(s)	855, 1184, 2062
BstENI	CCTNNNNNAGG	2 cut(s)	1170, 2699
BstFNI	CGCG	2 cut(s)	1758, 1988
BstH2I	RGCGCY	2 cut(s)	603, 1233
BstHHI	GCGC	4 cut(s)	403, 602, 1059, 1232
BstMAI	GTCTC	5 cut(s)	687, 917, 1279, 1282, 2792
BstMWI	GCNNNNNNNGC	8 cut(s)	33, 49, 1112, 1328, 1506, 2095, 2425, 2467
BstNI	CCWGG	4 cut(s)	724, 1173, 1412, 2366
BstNSI	RCATGY	1 cut(s)	2089
BstSCI	CCNGG	8 cut(s)	137, 722, 1171, 1195, 1291, 1410, 1788, 2364
BstSFI	CTRYAG	2 cut(s)	759, 1347
BstSLI	GKGCMC	3 cut(s)	988, 2164, 2377
BstUI	CGCG	2 cut(s)	1758, 1988
BstV1I	GCAGC	8 cut(s)	451, 457, 745, 880, 1654, 1688, 1759, 1952
BstV2I	GAAGAC	2 cut(s)	1988, 2506
BstX2I	RGATCY	2 cut(s)	636, 1726
BstYI	RGATCY	2 cut(s)	636, 1726
Bsu15I	ATCGAT	1 cut(s)	1516
Bsu36I	CCTNAGG	1 cut(s)	405
BsuI	GTATCC	2 cut(s)	250, 2699
BsuRI	GGCC	8 cut(s)	137, 1171, 1913, 2098, 2226, 2388, 2540, 2722
BsuTUI	ATCGAT	1 cut(s)	1516
BtgI	CCRYGG	3 cut(s)	855, 1184, 2062
BtgZI	GCGATG	1 cut(s)	1079
BtsI	GCAGTG	4 cut(s)	292, 768, 813, 1516
BtsIMutI	CAGTG	7 cut(s)	292, 296, 768, 813, 1231, 1331, 1516
BveI	ACCTGC	1 cut(s)	34
Cac8I	GCNNGC	7 cut(s)	34, 41, 82, 756, 1620, 2087, 2100
CaiI	CAGNNNCTG	1 cut(s)	470
CfoI	GCGC	4 cut(s)	403, 602, 1059, 1232
Cfr13I	GGNCC	6 cut(s)	1189, 1444, 1580, 1637, 2619, 2720
ClaI	ATCGAT	1 cut(s)	1516
CseI	GACGC	1 cut(s)	2805
Csp6I	GTAC	3 cut(s)	780, 950, 2307
CviAII	CATG	8 cut(s)	269, 898, 1555, 1689, 1955, 2086, 2662, 2791
CviQI	GTAC	3 cut(s)	780, 950, 2307
DdeI	CTNAG	7 cut(s)	252, 405, 435, 990, 1485, 1710, 2186
EaeI	YGGCCR	3 cut(s)	1169, 1911, 2538
Eam1104I	CTCTTC	4 cut(s)	1280, 1971, 2396, 2510
EarI	CTCTTC	4 cut(s)	1280, 1971, 2396, 2510
EciI	GGCGGA	1 cut(s)	206
Ecl136II	GAGCTC	1 cut(s)	2602
Eco130I	CCWWGG	4 cut(s)	1166, 1216, 1662, 2518
Eco147I	AGGCCT	1 cut(s)	2098
Eco24I	GRGCYC	1 cut(s)	2604
Eco31I	GGTCTC	3 cut(s)	687, 1282, 2792
Eco32I	GATATC	1 cut(s)	2035
Eco47I	GGWCC	5 cut(s)	1189, 1444, 1580, 1637, 2619
Eco47III	AGCGCT	1 cut(s)	601
Eco53kI	GAGCTC	1 cut(s)	2602
Eco57I	CTGAAG	1 cut(s)	2225
Eco72I	CACGTG	1 cut(s)	983
Eco81I	CCTNAGG	1 cut(s)	405
Eco88I	CYCGRG	2 cut(s)	1276, 2420
EcoICRI	GAGCTC	1 cut(s)	2602
EcoNI	CCTNNNNNAGG	2 cut(s)	1170, 2699
EcoRI	GAATTC	3 cut(s)	264, 1085, 1572
EcoRII	CCWGG	4 cut(s)	722, 1171, 1410, 2364
EcoRV	GATATC	1 cut(s)	2035
EcoT14I	CCWWGG	4 cut(s)	1166, 1216, 1662, 2518
EcoT22I	ATGCAT	1 cut(s)	2058
EcoT38I	GRGCYC	1 cut(s)	2604
ErhI	CCWWGG	4 cut(s)	1166, 1216, 1662, 2518
Esp3I	CGTCTC	1 cut(s)	1279
FaeI	CATG	8 cut(s)	272, 901, 1558, 1692, 1958, 2089, 2665, 2794
FalI	AAGNNNNNCTT	2 cut(s)	2726, 2758
FaqI	GGGAC	3 cut(s)	1202, 1609, 2808
FatI	CATG	8 cut(s)	268, 897, 1554, 1688, 1954, 2085, 2661, 2790
FauI	CCCGC	1 cut(s)	1455
FauNDI	CATATG	1 cut(s)	629
FbaI	TGATCA	4 cut(s)	549, 810, 1938, 2610
FblI	GTMKAC	4 cut(s)	293, 846, 1886, 2191
FriOI	GRGCYC	1 cut(s)	2604
FspBI	CTAG	1 cut(s)	273
GlaI	GCGC	4 cut(s)	402, 601, 1058, 1231
GsuI	CTGGAG	1 cut(s)	669
HaeII	RGCGCY	2 cut(s)	603, 1233
HaeIII	GGCC	8 cut(s)	137, 1171, 1913, 2098, 2226, 2388, 2540, 2722
HapII	CCGG	7 cut(s)	138, 261, 1197, 1293, 1789, 2541, 2806
HgaI	GACGC	1 cut(s)	2805
HhaI	GCGC	4 cut(s)	403, 602, 1059, 1232
Hin1I	GRCGYC	1 cut(s)	2797
Hin1II	CATG	8 cut(s)	272, 901, 1558, 1692, 1958, 2089, 2665, 2794
Hin6I	GCGC	4 cut(s)	401, 600, 1057, 1230
HinP1I	GCGC	4 cut(s)	401, 600, 1057, 1230
HincII	GTYRAC	3 cut(s)	1402, 1552, 2659
HindII	GTYRAC	3 cut(s)	1402, 1552, 2659
HindIII	AAGCTT	1 cut(s)	2712
HinfI	GANTC	9 cut(s)	513, 911, 1204, 1883, 1916, 2439, 2632, 2758, 2809
HpaI	GTTAAC	2 cut(s)	1402, 1552
HpaII	CCGG	7 cut(s)	138, 261, 1197, 1293, 1789, 2541, 2806
HphI	GGTGA	5 cut(s)	230, 752, 2491, 2551, 2767
Hpy99I	CGWCG	3 cut(s)	320, 1723, 2300
HpyCH4III	ACNGT	8 cut(s)	490, 784, 826, 1226, 1537, 1637, 2306, 2563
HpyCH4IV	ACGT	4 cut(s)	982, 1272, 1398, 1934
HpyF10VI	GCNNNNNNNGC	8 cut(s)	33, 49, 1112, 1328, 1506, 2095, 2425, 2467
HpyF3I	CTNAG	7 cut(s)	252, 405, 435, 990, 1485, 1710, 2186
HpySE526I	ACGT	4 cut(s)	982, 1272, 1398, 1934
Hsp92I	GRCGYC	1 cut(s)	2797
Hsp92II	CATG	8 cut(s)	272, 901, 1558, 1692, 1958, 2089, 2665, 2794
HspAI	GCGC	4 cut(s)	401, 600, 1057, 1230
KpnI	GGTACC	1 cut(s)	953
Ksp22I	TGATCA	4 cut(s)	549, 810, 1938, 2610
KspAI	GTTAAC	2 cut(s)	1402, 1552
LmnI	GCTCC	4 cut(s)	22, 1054, 1762, 2122
Lsp1109I	GCAGC	8 cut(s)	451, 457, 745, 880, 1654, 1688, 1759, 1952
LweI	GCATC	6 cut(s)	46, 388, 1738, 1759, 2043, 2680
MaeI	CTAG	1 cut(s)	273
MaeII	ACGT	4 cut(s)	982, 1272, 1398, 1934
MaeIII	GTNAC	3 cut(s)	580, 2462, 2563
MflI	RGATCY	2 cut(s)	636, 1726
MhlI	GDGCHC	5 cut(s)	988, 2164, 2377, 2421, 2604
MlsI	TGGCCA	1 cut(s)	1171
MluNI	TGGCCA	1 cut(s)	1171
MlyI	GAGTC	3 cut(s)	1892, 2448, 2803
MmeI	TCCRAC	3 cut(s)	338, 1947, 1988
Mox20I	TGGCCA	1 cut(s)	1171
Mph1103I	ATGCAT	1 cut(s)	2058
MroXI	GAANNNNTTC	1 cut(s)	2738
MscI	TGGCCA	1 cut(s)	1171
MslI	CAYNNNNRTG	1 cut(s)	2061
Msp20I	TGGCCA	1 cut(s)	1171
MspI	CCGG	7 cut(s)	138, 261, 1197, 1293, 1789, 2541, 2806
MspR9I	CCNGG	8 cut(s)	139, 724, 1173, 1197, 1293, 1412, 1790, 2366
Mva1269I	GAATGC	3 cut(s)	165, 1108, 2102
MvaI	CCWGG	4 cut(s)	724, 1173, 1412, 2366
MvnI	CGCG	2 cut(s)	1758, 1988
MwoI	GCNNNNNNNGC	8 cut(s)	33, 49, 1112, 1328, 1506, 2095, 2425, 2467
NciI	CCSGG	4 cut(s)	139, 1197, 1293, 1790
NdeI	CATATG	1 cut(s)	629
NlaIII	CATG	8 cut(s)	272, 901, 1558, 1692, 1958, 2089, 2665, 2794
NlaIV	GGNNCC	6 cut(s)	477, 951, 1190, 1321, 1446, 2721
NmeAIII	GCCGAG	2 cut(s)	946, 2605
NmuCI	GTSAC	1 cut(s)	2563
NsiI	ATGCAT	1 cut(s)	2058
NspI	RCATGY	1 cut(s)	2089
PaeI	GCATGC	1 cut(s)	2089
PaeR7I	CTCGAG	2 cut(s)	1276, 2420
PaqCI	CACCTGC	1 cut(s)	34
PceI	AGGCCT	1 cut(s)	2098
PcsI	WCGNNNNNNNCGW	1 cut(s)	1513
PctI	GAATGC	3 cut(s)	165, 1108, 2102
PdmI	GAANNNNTTC	1 cut(s)	2738
PfeI	GAWTC	6 cut(s)	513, 911, 1204, 1916, 2632, 2758
PflFI	GACNNNGTC	1 cut(s)	2196
PfoI	TCCNGGA	2 cut(s)	1195, 1788
PleI	GAGTC	3 cut(s)	1891, 2447, 2803
PmaCI	CACGTG	1 cut(s)	983
PmlI	CACGTG	1 cut(s)	983
PpsI	GAGTC	3 cut(s)	1891, 2447, 2803
Ppu21I	YACGTR	1 cut(s)	983
PshBI	ATTAAT	1 cut(s)	1892
PsiI	TTATAA	1 cut(s)	2830
Psp124BI	GAGCTC	1 cut(s)	2604
Psp1406I	AACGTT	1 cut(s)	1934
Psp6I	CCWGG	4 cut(s)	722, 1171, 1410, 2364
PspCI	CACGTG	1 cut(s)	983
PspGI	CCWGG	4 cut(s)	722, 1171, 1410, 2364
PspN4I	GGNNCC	6 cut(s)	477, 951, 1190, 1321, 1446, 2721
PspPI	GGNCC	6 cut(s)	1189, 1444, 1580, 1637, 2619, 2720
PspXI	VCTCGAGB	1 cut(s)	2420
PstI	CTGCAG	2 cut(s)	763, 1351
PstNI	CAGNNNCTG	1 cut(s)	470
PsuI	RGATCY	2 cut(s)	636, 1726
PsyI	GACNNNGTC	1 cut(s)	2196
RsaI	GTAC	3 cut(s)	781, 951, 2308
RsaNI	GTAC	3 cut(s)	780, 950, 2307
RseI	CAYNNNNRTG	1 cut(s)	2061
SacI	GAGCTC	1 cut(s)	2604
Sau96I	GGNCC	6 cut(s)	1189, 1444, 1580, 1637, 2619, 2720
SchI	GAGTC	3 cut(s)	1892, 2448, 2803
ScrFI	CCNGG	8 cut(s)	139, 724, 1173, 1197, 1293, 1412, 1790, 2366
SduI	GDGCHC	5 cut(s)	988, 2164, 2377, 2421, 2604
SfaNI	GCATC	6 cut(s)	46, 388, 1738, 1759, 2043, 2680
SfcI	CTRYAG	2 cut(s)	759, 1347
Sfr274I	CTCGAG	2 cut(s)	1276, 2420
SinI	GGWCC	5 cut(s)	1189, 1444, 1580, 1637, 2619
SlaI	CTCGAG	2 cut(s)	1276, 2420
SmiMI	CAYNNNNRTG	1 cut(s)	2061
SmlI	CTYRAG	3 cut(s)	1276, 2092, 2420
SmoI	CTYRAG	3 cut(s)	1276, 2092, 2420
SphI	GCATGC	1 cut(s)	2089
SseBI	AGGCCT	1 cut(s)	2098
SspI	AATATT	1 cut(s)	458
SspMI	CTAG	1 cut(s)	273
SstI	GAGCTC	1 cut(s)	2604
StuI	AGGCCT	1 cut(s)	2098
StyD4I	CCNGG	8 cut(s)	137, 722, 1171, 1195, 1291, 1410, 1788, 2364
StyI	CCWWGG	4 cut(s)	1166, 1216, 1662, 2518
TaaI	ACNGT	8 cut(s)	490, 784, 826, 1226, 1537, 1637, 2306, 2563
TaiI	ACGT	4 cut(s)	985, 1275, 1401, 1937
TatI	WGTACW	2 cut(s)	779, 2306
TauI	GCSGC	2 cut(s)	39, 2229
TfiI	GAWTC	6 cut(s)	513, 911, 1204, 1916, 2632, 2758
TscAI	CASTG	7 cut(s)	292, 303, 768, 820, 1231, 1338, 1516
TseFI	GTSAC	1 cut(s)	2563
TseI	GCWGC	8 cut(s)	439, 470, 758, 893, 1667, 1701, 1772, 1965
Tsp45I	GTSAC	1 cut(s)	2563
TspGWI	ACGGA	5 cut(s)	780, 1173, 1861, 1917, 2042
TspRI	CASTG	7 cut(s)	292, 303, 768, 820, 1231, 1338, 1516
Tth111I	GACNNNGTC	1 cut(s)	2196
VneI	GTGCAC	1 cut(s)	984
VpaK11BI	GGWCC	5 cut(s)	1189, 1444, 1580, 1637, 2619
VspI	ATTAAT	1 cut(s)	1892
XagI	CCTNNNNNAGG	2 cut(s)	1170, 2699
XceI	RCATGY	1 cut(s)	2089
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1140
XhoI	CTCGAG	2 cut(s)	1276, 2420
XmiI	GTMKAC	4 cut(s)	293, 846, 1886, 2191
XmnI	GAANNNNTTC	1 cut(s)	2738
XspI	CTAG	1 cut(s)	273
Zsp2I	ATGCAT	1 cut(s)	2058

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.