Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0010642

Physical Location & Seq

Genomic Coordinates Forward (+)

36763816 .. 36769657

Gene Structure 5842 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1276500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2946 bp

ATGATGCAGTCCGTGGCTCCTGTGTGCAATGTCTGCGGCGAGCAGGTGGGGCTTGGTGCCAATGGGGAGGTTTTCGTGGCATGCCACGAGTGTAATTTCCCCATTTGCAAGGCTTGTTTCGATGAAGATGTCAAGGCTGGGCGTAAAGTTTGCTTGCAGTGTGGTATTCCCTATGACGATAACCCGTTGGCGGAGTATGAAACAAAGGTGTCAGGCACTCGATCCACAATGGAAGCTCACCTGAATAATACACAGGATACAGGAATTCATGCTAGGCATATCAGCAGTGTGTCTACGTTGGATAGTGAATTAAACGATGAATCTGGCAATCCGATTTGGAAGAATAGAGTGGAAAGTTGGAAGGATAAGAAGGATAAGAAGGATAAAAAGATCAAGAAGAAAAAGGATACACCTAATGGGGAAAAAGAGGCTCAAATTCCACCTGAGAAGCAGATGACAGAGGAATATTCATCAGAGGCTGCGGAACCACTTTCAACTCTCGTCCCACTTCCATCTAACAGAATCACACCATACAGAACTGTTATAATTATGCGATTGATCATTCTCGCCCTTTTCTTCCATTATCGAGTAACAAATCCTGTTGATAGTGCTTACGGTCTATGGTTCACTTCGATCATATGTGAGATCTGGTTTGCTTTTTCTTGGGTGTTGGATCAGTTTCCTAAGTGGTCTCCAGTTAATCGGACTACATTTACTGACAGGTTATCTGCCAGGTTTGAAAGAGAGGGTGAACTCTCCGAGCTTGCTGCTGTGGATTTCTTCGTAAGTACAGTTGATCCGTTGAAAGAACCGCCCTTGATTACTGCCAATACCGTGCTTTCTATCCTTGCTGTAGACTACCCTGTGGACAAAGTTTCCTGCTATGTGTCTGATGATGGTGCTGCCATGCTTACATTTGAATCCCTTGCCGAAACATCTGAATTTGCAACAAAGTGGGTTCCTTTCTGCAAGAAATTTTCAATTGAACCACGTGCACCTGAGTTTTACTTCTCACAAAAGATTGACTACTTGAAGGATAAAGTGCAACCATCTTTTGTGAAGGAGCGCAGAGCGATGAAAAGAGATTATGAAGAGTTCAAAGTGCGAATGAATGCTTTAGTAGCAAAGGCTCAAAAAACACCAGAAGAAGGATGGACTATGCAAGATGGAACTCCATGGCCAGGAAATAACTCGCGTGACCATCCTGGGATGATCCAGGTGTTCCTTGGACATAGCGGTGCCTATGACATCGAGGGAAATGAACTTCCTCGATTGGTTTATGTCTCGAGAGAGAAGAGACCCGGCTACCCACATCACAAGAAAGCTGGTGCTGAAAATGCTTTGGTAAGGGTGTCTGCAGTTCTCACAAATGCCCCATACATCCTCAATCTTGACTGTGATCACTACGTTAACAACAGCCAGGCAATTCGTGAGGCAATGTGTTTCTTGATGGACCCTCAAGTCGGTCGAGAAGTATGCTATGTGCAGTTTCCTCAGAGGTTTGATGGTATTGATCGCAGTGATCGATATGCTAATCGCAACACAGTTTTCTTTGATGTTAACATGAAAGGACTGGATGGCATTCAAGGTCCAGTATATGTGGGGACAGGATGTTGTTTCAACAGGCAAGCACTTTACGGCTACGGTCCTCCTTCTATGCCCGCCTTATCCAAGGCTGCTTCCTCATCCTCCTGCTCTTGTTGCTGTCCCTCTAAGAAGCCCTCTAAAGATGTGTCAGAGGCTTATCGAGATGCAAAACAGGAGGAGCTTGATGCTGCCATTTTTAACCTCCGTGATATTGAGAATTATGATGAGCTTGAGAGGTCAATGCTGATCTCGCAGACAAGCTTTGAGAAAACTTTTGGATTATCGTCTGTATTCATCGAATCTACGCTAATGGAGAACGGAGGAGTGGCCGAATCTTCCAACCCTTCAACATTGATCAAGGAGGCGATTCACGTCATTAGCTGTGGTTATGAAGAGAAGACCGCGTGGGGAAAAGAGATTGGTTGGATATATGGATCAATCACTGAGGATATCTTAACCGGTTTCAAGATGCATTGCCGTGGATGGAGGTCAATTTACTGCATGCCCTTGAGACCTGCATTCAAAGGGTCAGCTCCCATTAACCTTTCTGATCGACTGCACCAAGTTCTTCGGTGGGCACTGGGATCGGTGGAAATTTTCCTCAGTAGACATTGTCCTCTCTGGTACGGGTTTGCAGGAGGCCGCCTCAAATTGCTTCAGAGAATGGCATATATCAACACTATTGTTTACCCCTTCACATCCCTCCCTCTCGTCGCTTACTGCACACTCCCTGCAATATGCCTTCTCACAGGAAAATTCATCATCCCAACACTTACAAACCTGGCAAGTGCCCTGTTTCTTGGCCTCTTCATCTCCATCATTGCTACAAGTGTGCTTGAGTTGAGGTGGAGTGGAGTCCGCATTGAGGACTTATGGCGTAACGAGCAGTTCTGGGTGATCGGAGGTGTTTCAGCCCATCTCTTTGCCGTCTTCCAAGGTTTCTTAAAGATGTTGGCCGGAATTGACACCAACTTCACCGTCACAACCAAATCAGCCGAAGACACAGAATTCGGAGAGCTCTATCTGATCAAATGGACCACACTTTTGATTCCCCCAACTACACTCCTCATCGTCAACATGGTTGGTGTTGTTGCAGGATTTTCGGACGCCCTCAACAAGGGATACGAAGCTTGGGGGCCACTTTTCGGGAAGGTTTTCTTTGCCTTCTGGGTGATTCTTCATCTATATCCCTTCCTCAAAGGTCTCATGGGACGCCAAAACCGGACTCCAACCATCGTTGTTTTGTGGTCAGTGCTCTTGGCCTCTGTCTTCTCCCTTGTTTGGGTGAAGATAAATCCATTTGTGAGCAAAGTGGACAGCTCAACGCTTGCTCAAAGCTGCATTTCCATAGACTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0006950 GO:0006952 GO:0006970 GO:0007049 GO:0008150 GO:0008152 GO:0008194 GO:0009058 GO:0009059 GO:0009250 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009832 GO:0009833 GO:0009834 GO:0009987 GO:0010035 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0016760 GO:0022402 GO:0030243 GO:0030244 GO:0030312 GO:0033692 GO:0034637 GO:0034645 GO:0035251 GO:0042221 GO:0042546 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0050832 GO:0050896 GO:0051273 GO:0051274 GO:0051301 GO:0051704 GO:0051707 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:0098542 GO:1901576 GO:1901700 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt WD40 zf-UDP

Protein Analysis

982

Amino Acids

110.18

Weight (kDa)

6.22

Isoelectric Point (pI)

39.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-UDP	PF14569	5 - 58	1.3e-15	Zinc-binding RING-finger
Cellulose_synt	PF03552	258 - 971	0.0	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0010642)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G18780
fragaria_vesca	FvH4_3g07420 FvH4_3g07420
malus_domestica	MD05G1296600.v1.1 MD10G1276500.v1.1
prunus_persica	Prupe.4G065700_v2.0.a1 Prupe.4G065700_v2.0.a1
pyrus_communis	pycom05g27510 pycom10g23090
rosa_chinensis	RchiOBHm_Chr5g0011441
rosa_laevigata	RLG00000031835
rosa_multiflora	Rmu_co8341655.1_g000001 Rmu_sc0009001.1_g000001
rosa_roxburghii	Rroxscaffold_1G00065000
rosa_rugosa	Rorug04G0457000
rosa_samantha	Rh5AG088900 Rh5BG084100 Rh5CG097600 Rh5DG084100
rosa_wichuraiana	Rw5G007740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	545
AarI	CACCTGC	1 cut(s)	34
AasI	GACNNNNNNGTC	1 cut(s)	1460
Acc36I	ACCTGC	2 cut(s)	34, 2110
AccB1I	GGYRCC	2 cut(s)	56, 1238
AccI	GTMKAC	3 cut(s)	293, 855, 2194
AccII	CGCG	2 cut(s)	1195, 1991
AciI	CCGC	9 cut(s)	36, 191, 482, 812, 1236, 1662, 1989, 2230, 2446
AclWI	GGATC	6 cut(s)	216, 681, 791, 1207, 2029, 2179
AcoI	YGGCCR	3 cut(s)	1178, 1914, 2541
AcsI	RAATTY	7 cut(s)	264, 435, 941, 974, 2181, 2342, 2594
AcuI	CTGAAG	1 cut(s)	2228
AcvI	CACGTG	1 cut(s)	992
AcyI	GRCGYC	2 cut(s)	2694, 2800
AfaI	GTAC	2 cut(s)	790, 2213
AfiI	CCNNNNNNNGG	9 cut(s)	190, 1148, 1181, 1463, 2452, 2704, 2732, 2868, 2869
AgeI	ACCGGT	1 cut(s)	2045
AjiI	CACGTC	1 cut(s)	1960
AjnI	CCWGG	6 cut(s)	731, 1180, 1204, 1215, 1419, 2367
Alw21I	GWGCWC	3 cut(s)	997, 2607, 2844
Alw26I	GTCTC	5 cut(s)	696, 1288, 1291, 2092, 2795
Alw44I	GTGCAC	1 cut(s)	993
AlwI	GGATC	6 cut(s)	216, 681, 791, 1207, 2029, 2179
AlwNI	CAGNNNCTG	1 cut(s)	479
Ama87I	CYCGRG	1 cut(s)	1285
AoxI	GGCC	7 cut(s)	1178, 1914, 2227, 2389, 2541, 2723, 2847
ApaLI	GTGCAC	1 cut(s)	993
ApeKI	GCWGC	6 cut(s)	479, 767, 902, 1676, 1775, 2925
ApoI	RAATTY	7 cut(s)	264, 435, 941, 974, 2181, 2342, 2594
ArsI	GACNNNNNNTTYG	4 cut(s)	2579, 2611, 2614, 2646
AsiGI	ACCGGT	1 cut(s)	2045
Asp700I	GAANNNNTTC	1 cut(s)	2741
AspLEI	GCGC	1 cut(s)	1068
AspS9I	GGNCC	5 cut(s)	1453, 1589, 1646, 2622, 2723
AsuC2I	CCSGG	1 cut(s)	1302
AsuHPI	GGTGA	6 cut(s)	230, 761, 2494, 2554, 2770, 2884
AvaI	CYCGRG	1 cut(s)	1285
AvaII	GGWCC	4 cut(s)	1453, 1589, 1646, 2622
BaeGI	GKGCMC	3 cut(s)	997, 2167, 2380
BalI	TGGCCA	1 cut(s)	1180
BanI	GGYRCC	2 cut(s)	56, 1238
BanII	GRGCYC	1 cut(s)	2607
BauI	CACGAG	1 cut(s)	86
BbrPI	CACGTG	1 cut(s)	992
BbsI	GAAGAC	4 cut(s)	1991, 2509, 2592, 2848
Bbv12I	GWGCWC	3 cut(s)	997, 2607, 2844
BbvI	GCAGC	6 cut(s)	466, 754, 889, 1663, 1762, 2912
BceAI	ACGGC	3 cut(s)	1654, 2049, 2498
BcgI	CGANNNNNNTGC	8 cut(s)	749, 783, 1458, 1492, 2154, 2188, 2670, 2704
BciT130I	CCWGG	6 cut(s)	733, 1182, 1206, 1217, 1421, 2369
BciVI	GTATCC	3 cut(s)	250, 400, 2702
BclI	TGATCA	4 cut(s)	558, 1399, 1941, 2613
BcnI	CCSGG	1 cut(s)	1302
BcoDI	GTCTC	5 cut(s)	696, 1288, 1291, 2092, 2795
BfaI	CTAG	1 cut(s)	273
BfmI	CTRYAG	2 cut(s)	852, 1356
BfuAI	ACCTGC	2 cut(s)	34, 2110
BfuI	GTATCC	3 cut(s)	250, 400, 2702
BglII	AGATCT	1 cut(s)	645
BisI	GCNGC	8 cut(s)	37, 480, 768, 903, 1677, 1776, 2230, 2926
BlsI	GCNGC	8 cut(s)	38, 481, 769, 904, 1678, 1777, 2231, 2927
Bme1390I	CCNGG	7 cut(s)	733, 1182, 1206, 1217, 1302, 1421, 2369
Bme18I	GGWCC	4 cut(s)	1453, 1589, 1646, 2622
BmeT110I	CYCGRG	1 cut(s)	1285
BmgBI	CACGTC	1 cut(s)	1960
BmgT120I	GGNCC	5 cut(s)	1453, 1589, 1646, 2622, 2723
BmiI	GGNNCC	7 cut(s)	18, 58, 486, 960, 1240, 1455, 2724
BmrFI	CCNGG	7 cut(s)	733, 1182, 1206, 1217, 1302, 1421, 2369
BmrI	ACTGGG	1 cut(s)	2177
BmsI	GCATC	3 cut(s)	1741, 1762, 2046
BmuI	ACTGGG	1 cut(s)	2177
BpiI	GAAGAC	4 cut(s)	1991, 2509, 2592, 2848
BplI	GAGNNNNNCTC	2 cut(s)	2217, 2249
BpmI	CTGGAG	1 cut(s)	678
BpuEI	CTTGAG	4 cut(s)	1443, 1838, 2116, 2444
BpuMI	CCSGG	1 cut(s)	1302
Bsa29I	ATCGAT	1 cut(s)	1525
BsaAI	YACGTR	1 cut(s)	992
BsaHI	GRCGYC	2 cut(s)	2694, 2800
BsaI	GGTCTC	4 cut(s)	696, 1291, 2092, 2795
BsaJI	CCNNGG	7 cut(s)	12, 1175, 1205, 1225, 1671, 2065, 2521
BsaWI	WCCGGW	2 cut(s)	2045, 2808
Bsc4I	CCNNNNNNNGG	9 cut(s)	190, 1148, 1181, 1463, 2452, 2704, 2732, 2868, 2869
Bse118I	RCCGGY	1 cut(s)	2045
Bse1I	ACTGG	4 cut(s)	695, 1578, 1592, 2172
Bse3DI	GCAATG	4 cut(s)	34, 1443, 2059, 2406
BseBI	CCWGG	6 cut(s)	733, 1182, 1206, 1217, 1421, 2369
BseCI	ATCGAT	1 cut(s)	1525
BseDI	CCNNGG	7 cut(s)	12, 1175, 1205, 1225, 1671, 2065, 2521
BseLI	CCNNNNNNNGG	9 cut(s)	190, 1148, 1181, 1463, 2452, 2704, 2732, 2868, 2869
BseMI	GCAATG	4 cut(s)	34, 1443, 2059, 2406
BseMII	CTCAG	5 cut(s)	435, 990, 1508, 2022, 2203
BseNI	ACTGG	4 cut(s)	695, 1578, 1592, 2172
BseRI	GAGGAG	3 cut(s)	1778, 1923, 2642
BseSI	GKGCMC	3 cut(s)	997, 2167, 2380
BseXI	GCAGC	6 cut(s)	466, 754, 889, 1663, 1762, 2912
BseYI	CCCAGC	1 cut(s)	137
BsgI	GTGCAG	3 cut(s)	1505, 2129, 2293
Bsh1236I	CGCG	2 cut(s)	1195, 1991
Bsh1285I	CGRYCG	1 cut(s)	1468
BshFI	GGCC	7 cut(s)	1180, 1916, 2229, 2391, 2543, 2725, 2849
BshNI	GGYRCC	2 cut(s)	56, 1238
BshTI	ACCGGT	1 cut(s)	2045
BshVI	ATCGAT	1 cut(s)	1525
BsiEI	CGRYCG	1 cut(s)	1468
BsiHKAI	GWGCWC	3 cut(s)	997, 2607, 2844
BsiHKCI	CYCGRG	1 cut(s)	1285
BsiSI	CCGG	4 cut(s)	1302, 2046, 2544, 2809
BslFI	GGGAC	4 cut(s)	488, 1618, 1692, 2811
BslI	CCNNNNNNNGG	9 cut(s)	190, 1148, 1181, 1463, 2452, 2704, 2732, 2868, 2869
BsmAI	GTCTC	5 cut(s)	696, 1288, 1291, 2092, 2795
BsmFI	GGGAC	4 cut(s)	488, 1618, 1692, 2811
BsmI	GAATGC	3 cut(s)	1117, 1581, 2105
BsnI	GGCC	7 cut(s)	1180, 1916, 2229, 2391, 2543, 2725, 2849
Bso31I	GGTCTC	4 cut(s)	696, 1291, 2092, 2795
BsoBI	CYCGRG	1 cut(s)	1285
Bsp1286I	GDGCHC	5 cut(s)	997, 2167, 2380, 2607, 2844
Bsp19I	CCATGG	1 cut(s)	1175
BspACI	CCGC	9 cut(s)	36, 191, 482, 812, 1236, 1662, 1989, 2230, 2446
BspANI	GGCC	7 cut(s)	1180, 1916, 2229, 2391, 2543, 2725, 2849
BspCNI	CTCAG	5 cut(s)	436, 991, 1507, 2023, 2202
BspDI	ATCGAT	1 cut(s)	1525
BspFNI	CGCG	2 cut(s)	1195, 1991
BspLI	GGNNCC	7 cut(s)	18, 58, 486, 960, 1240, 1455, 2724
BspMAI	CTGCAG	1 cut(s)	1360
BspMI	ACCTGC	2 cut(s)	34, 2110
BspPI	GGATC	6 cut(s)	216, 681, 791, 1207, 2029, 2179
BspT107I	GGYRCC	2 cut(s)	56, 1238
BspTNI	GGTCTC	4 cut(s)	696, 1291, 2092, 2795
BsrDI	GCAATG	4 cut(s)	34, 1443, 2059, 2406
BsrFI	RCCGGY	1 cut(s)	2045
BsrI	ACTGG	4 cut(s)	695, 1578, 1592, 2172
BssAI	RCCGGY	1 cut(s)	2045
BssECI	CCNNGG	7 cut(s)	12, 1175, 1205, 1225, 1671, 2065, 2521
BssNI	GRCGYC	2 cut(s)	2694, 2800
BssSI	CACGAG	1 cut(s)	86
BssT1I	CCWWGG	4 cut(s)	1175, 1225, 1671, 2521
Bst2BI	CACGAG	1 cut(s)	86
Bst2UI	CCWGG	6 cut(s)	733, 1182, 1206, 1217, 1421, 2369
Bst4CI	ACNGT	8 cut(s)	541, 617, 793, 835, 1397, 1546, 1646, 2566
Bst6I	CTCTTC	4 cut(s)	1086, 1289, 1974, 2399
BstACI	GRCGYC	2 cut(s)	2694, 2800
BstAPI	GCANNNNNTGC	1 cut(s)	33
BstBAI	YACGTR	1 cut(s)	992
BstC8I	GCNNGC	8 cut(s)	41, 82, 155, 765, 1629, 1662, 2090, 2916
BstDEI	CTNAG	7 cut(s)	444, 684, 999, 1494, 1713, 2031, 2189
BstDSI	CCRYGG	3 cut(s)	12, 1175, 2065
BstENI	CCTNNNNNAGG	1 cut(s)	2702
BstFNI	CGCG	2 cut(s)	1195, 1991
BstHHI	GCGC	1 cut(s)	1068
BstMAI	GTCTC	5 cut(s)	696, 1288, 1291, 2092, 2795
BstMCI	CGRYCG	1 cut(s)	1468
BstMWI	GCNNNNNNNGC	7 cut(s)	33, 49, 1121, 1337, 1701, 1837, 2470
BstNI	CCWGG	6 cut(s)	733, 1182, 1206, 1217, 1421, 2369
BstNSI	RCATGY	2 cut(s)	84, 2092
BstSCI	CCNGG	7 cut(s)	731, 1180, 1204, 1215, 1300, 1419, 2367
BstSFI	CTRYAG	2 cut(s)	852, 1356
BstSLI	GKGCMC	3 cut(s)	997, 2167, 2380
BstUI	CGCG	2 cut(s)	1195, 1991
BstV1I	GCAGC	6 cut(s)	466, 754, 889, 1663, 1762, 2912
BstV2I	GAAGAC	4 cut(s)	1991, 2509, 2592, 2848
BstX2I	RGATCY	1 cut(s)	645
BstYI	RGATCY	1 cut(s)	645
Bsu15I	ATCGAT	1 cut(s)	1525
BsuI	GTATCC	3 cut(s)	250, 400, 2702
BsuRI	GGCC	7 cut(s)	1180, 1916, 2229, 2391, 2543, 2725, 2849
BsuTUI	ATCGAT	1 cut(s)	1525
BtgI	CCRYGG	3 cut(s)	12, 1175, 2065
BtgZI	GCGATG	1 cut(s)	1088
BtrI	CACGTC	1 cut(s)	1960
BtsI	GCAGTG	3 cut(s)	164, 292, 1525
BtsIMutI	CAGTG	6 cut(s)	164, 292, 1525, 2028, 2165, 2844
BveI	ACCTGC	2 cut(s)	34, 2110
Cac8I	GCNNGC	8 cut(s)	41, 82, 155, 765, 1629, 1662, 2090, 2916
CaiI	CAGNNNCTG	1 cut(s)	479
CfoI	GCGC	1 cut(s)	1068
Cfr10I	RCCGGY	1 cut(s)	2045
Cfr13I	GGNCC	5 cut(s)	1453, 1589, 1646, 2622, 2723
ClaI	ATCGAT	1 cut(s)	1525
CseI	GACGC	2 cut(s)	2702, 2808
Csp6I	GTAC	2 cut(s)	789, 2212
CspAI	ACCGGT	1 cut(s)	2045
CviAII	CATG	8 cut(s)	81, 269, 907, 1176, 1564, 2089, 2665, 2794
CviQI	GTAC	2 cut(s)	789, 2212
DdeI	CTNAG	7 cut(s)	444, 684, 999, 1494, 1713, 2031, 2189
DrdI	GACNNNNNNGTC	1 cut(s)	1460
DseDI	GACNNNNNNGTC	1 cut(s)	1460
EaeI	YGGCCR	3 cut(s)	1178, 1914, 2541
Eam1104I	CTCTTC	4 cut(s)	1086, 1289, 1974, 2399
EarI	CTCTTC	4 cut(s)	1086, 1289, 1974, 2399
EciI	GGCGGA	1 cut(s)	206
Ecl136II	GAGCTC	1 cut(s)	2605
Eco130I	CCWWGG	4 cut(s)	1175, 1225, 1671, 2521
Eco24I	GRGCYC	1 cut(s)	2607
Eco31I	GGTCTC	4 cut(s)	696, 1291, 2092, 2795
Eco32I	GATATC	1 cut(s)	2038
Eco47I	GGWCC	4 cut(s)	1453, 1589, 1646, 2622
Eco53kI	GAGCTC	1 cut(s)	2605
Eco57I	CTGAAG	1 cut(s)	2228
Eco72I	CACGTG	1 cut(s)	992
Eco88I	CYCGRG	1 cut(s)	1285
EcoICRI	GAGCTC	1 cut(s)	2605
EcoNI	CCTNNNNNAGG	1 cut(s)	2702
EcoRI	GAATTC	2 cut(s)	264, 2594
EcoRII	CCWGG	6 cut(s)	731, 1180, 1204, 1215, 1419, 2367
EcoRV	GATATC	1 cut(s)	2038
EcoT14I	CCWWGG	4 cut(s)	1175, 1225, 1671, 2521
EcoT22I	ATGCAT	1 cut(s)	2061
EcoT38I	GRGCYC	1 cut(s)	2607
ErhI	CCWWGG	4 cut(s)	1175, 1225, 1671, 2521
FaeI	CATG	8 cut(s)	84, 272, 910, 1179, 1567, 2092, 2668, 2797
FalI	AAGNNNNNCTT	2 cut(s)	2729, 2761
FaqI	GGGAC	4 cut(s)	488, 1618, 1692, 2811
FatI	CATG	8 cut(s)	80, 268, 906, 1175, 1563, 2088, 2664, 2793
FauI	CCCGC	1 cut(s)	1669
FauNDI	CATATG	1 cut(s)	638
FbaI	TGATCA	4 cut(s)	558, 1399, 1941, 2613
FblI	GTMKAC	3 cut(s)	293, 855, 2194
Fnu4HI	GCNGC	8 cut(s)	37, 480, 768, 903, 1677, 1776, 2230, 2926
FriOI	GRGCYC	1 cut(s)	2607
Fsp4HI	GCNGC	8 cut(s)	37, 480, 768, 903, 1677, 1776, 2230, 2926
FspBI	CTAG	1 cut(s)	273
GlaI	GCGC	1 cut(s)	1067
GluI	GCNGC	8 cut(s)	37, 480, 768, 903, 1677, 1776, 2230, 2926
GsaI	CCCAGC	1 cut(s)	141
GsuI	CTGGAG	1 cut(s)	678
HaeIII	GGCC	7 cut(s)	1180, 1916, 2229, 2391, 2543, 2725, 2849
HapII	CCGG	4 cut(s)	1302, 2046, 2544, 2809
HgaI	GACGC	2 cut(s)	2702, 2808
HhaI	GCGC	1 cut(s)	1068
Hin1I	GRCGYC	2 cut(s)	2694, 2800
Hin1II	CATG	8 cut(s)	84, 272, 910, 1179, 1567, 2092, 2668, 2797
Hin6I	GCGC	1 cut(s)	1066
HinP1I	GCGC	1 cut(s)	1066
HincII	GTYRAC	3 cut(s)	1411, 1561, 2662
HindII	GTYRAC	3 cut(s)	1411, 1561, 2662
HindIII	AAGCTT	2 cut(s)	1846, 2715
HpaI	GTTAAC	2 cut(s)	1411, 1561
HpaII	CCGG	4 cut(s)	1302, 2046, 2544, 2809
HphI	GGTGA	6 cut(s)	230, 761, 2494, 2554, 2770, 2884
Hpy99I	CGWCG	1 cut(s)	2303
HpyCH4III	ACNGT	8 cut(s)	541, 617, 793, 835, 1397, 1546, 1646, 2566
HpyCH4IV	ACGT	4 cut(s)	296, 991, 1407, 1959
HpyF10VI	GCNNNNNNNGC	7 cut(s)	33, 49, 1121, 1337, 1701, 1837, 2470
HpyF3I	CTNAG	7 cut(s)	444, 684, 999, 1494, 1713, 2031, 2189
HpySE526I	ACGT	4 cut(s)	296, 991, 1407, 1959
Hsp92I	GRCGYC	2 cut(s)	2694, 2800
Hsp92II	CATG	8 cut(s)	84, 272, 910, 1179, 1567, 2092, 2668, 2797
HspAI	GCGC	1 cut(s)	1066
Ksp22I	TGATCA	4 cut(s)	558, 1399, 1941, 2613
KspAI	GTTAAC	2 cut(s)	1411, 1561
LmnI	GCTCC	4 cut(s)	22, 1063, 1765, 2125
Lsp1109I	GCAGC	6 cut(s)	466, 754, 889, 1663, 1762, 2912
LweI	GCATC	3 cut(s)	1741, 1762, 2046
MaeI	CTAG	1 cut(s)	273
MaeII	ACGT	4 cut(s)	296, 991, 1407, 1959
MaeIII	GTNAC	4 cut(s)	589, 1196, 2465, 2566
MfeI	CAATTG	1 cut(s)	981
MflI	RGATCY	1 cut(s)	645
MhlI	GDGCHC	5 cut(s)	997, 2167, 2380, 2607, 2844
MlsI	TGGCCA	1 cut(s)	1180
MluNI	TGGCCA	1 cut(s)	1180
MlyI	GAGTC	2 cut(s)	2451, 2806
MmeI	TCCRAC	6 cut(s)	279, 338, 651, 1950, 1991, 2840
Mox20I	TGGCCA	1 cut(s)	1180
Mph1103I	ATGCAT	1 cut(s)	2061
MroXI	GAANNNNTTC	1 cut(s)	2741
MscI	TGGCCA	1 cut(s)	1180
MseI	TTAA	8 cut(s)	311, 699, 1410, 1560, 1785, 2042, 2127, 2531
MslI	CAYNNNNRTG	2 cut(s)	1236, 2064
Msp20I	TGGCCA	1 cut(s)	1180
MspI	CCGG	4 cut(s)	1302, 2046, 2544, 2809
MspR9I	CCNGG	7 cut(s)	733, 1182, 1206, 1217, 1302, 1421, 2369
MunI	CAATTG	1 cut(s)	981
Mva1269I	GAATGC	3 cut(s)	1117, 1581, 2105
MvaI	CCWGG	6 cut(s)	733, 1182, 1206, 1217, 1421, 2369
MvnI	CGCG	2 cut(s)	1195, 1991
MwoI	GCNNNNNNNGC	7 cut(s)	33, 49, 1121, 1337, 1701, 1837, 2470
NciI	CCSGG	1 cut(s)	1302
NcoI	CCATGG	1 cut(s)	1175
NdeI	CATATG	1 cut(s)	638
NlaIII	CATG	8 cut(s)	84, 272, 910, 1179, 1567, 2092, 2668, 2797
NlaIV	GGNNCC	7 cut(s)	18, 58, 486, 960, 1240, 1455, 2724
NmuCI	GTSAC	2 cut(s)	1196, 2566
NsiI	ATGCAT	1 cut(s)	2061
NspI	RCATGY	2 cut(s)	84, 2092
PaeI	GCATGC	2 cut(s)	84, 2092
PaeR7I	CTCGAG	1 cut(s)	1285
PaqCI	CACCTGC	1 cut(s)	34
PcsI	WCGNNNNNNNCGW	1 cut(s)	1522
PctI	GAATGC	3 cut(s)	1117, 1581, 2105
PdmI	GAANNNNTTC	1 cut(s)	2741
PfeI	GAWTC	8 cut(s)	320, 522, 920, 1886, 1919, 1954, 2635, 2761
PflFI	GACNNNGTC	1 cut(s)	2199
PinAI	ACCGGT	1 cut(s)	2045
PkrI	GCNGC	8 cut(s)	38, 481, 769, 904, 1678, 1777, 2231, 2927
PleI	GAGTC	2 cut(s)	2450, 2806
PmaCI	CACGTG	1 cut(s)	992
PmlI	CACGTG	1 cut(s)	992
PpsI	GAGTC	2 cut(s)	2450, 2806
Ppu21I	YACGTR	1 cut(s)	992
PsiI	TTATAA	1 cut(s)	545
Psp124BI	GAGCTC	1 cut(s)	2607
Psp6I	CCWGG	6 cut(s)	731, 1180, 1204, 1215, 1419, 2367
PspCI	CACGTG	1 cut(s)	992
PspFI	CCCAGC	1 cut(s)	137
PspGI	CCWGG	6 cut(s)	731, 1180, 1204, 1215, 1419, 2367
PspN4I	GGNNCC	7 cut(s)	18, 58, 486, 960, 1240, 1455, 2724
PspPI	GGNCC	5 cut(s)	1453, 1589, 1646, 2622, 2723
PstI	CTGCAG	1 cut(s)	1360
PstNI	CAGNNNCTG	1 cut(s)	479
PsuI	RGATCY	1 cut(s)	645
PsyI	GACNNNGTC	1 cut(s)	2199
RsaI	GTAC	2 cut(s)	790, 2213
RsaNI	GTAC	2 cut(s)	789, 2212
RseI	CAYNNNNRTG	2 cut(s)	1236, 2064
SacI	GAGCTC	1 cut(s)	2607
SaqAI	TTAA	8 cut(s)	311, 699, 1410, 1560, 1785, 2042, 2127, 2531
SatI	GCNGC	8 cut(s)	37, 480, 768, 903, 1677, 1776, 2230, 2926
Sau96I	GGNCC	5 cut(s)	1453, 1589, 1646, 2622, 2723
SchI	GAGTC	2 cut(s)	2451, 2806
ScrFI	CCNGG	7 cut(s)	733, 1182, 1206, 1217, 1302, 1421, 2369
SduI	GDGCHC	5 cut(s)	997, 2167, 2380, 2607, 2844
SfaNI	GCATC	3 cut(s)	1741, 1762, 2046
SfcI	CTRYAG	2 cut(s)	852, 1356
Sfr274I	CTCGAG	1 cut(s)	1285
SinI	GGWCC	4 cut(s)	1453, 1589, 1646, 2622
SlaI	CTCGAG	1 cut(s)	1285
SmiMI	CAYNNNNRTG	2 cut(s)	1236, 2064
SmlI	CTYRAG	5 cut(s)	1285, 1458, 1817, 2095, 2423
SmoI	CTYRAG	5 cut(s)	1285, 1458, 1817, 2095, 2423
SphI	GCATGC	2 cut(s)	84, 2092
SsiI	CCGC	9 cut(s)	36, 191, 482, 812, 1236, 1662, 1989, 2230, 2446
SspI	AATATT	1 cut(s)	467
SspMI	CTAG	1 cut(s)	273
SstI	GAGCTC	1 cut(s)	2607
StyD4I	CCNGG	7 cut(s)	731, 1180, 1204, 1215, 1300, 1419, 2367
StyI	CCWWGG	4 cut(s)	1175, 1225, 1671, 2521
TaaI	ACNGT	8 cut(s)	541, 617, 793, 835, 1397, 1546, 1646, 2566
TaiI	ACGT	4 cut(s)	299, 994, 1410, 1962
TaqII	GACCGA	1 cut(s)	1454
TatI	WGTACW	1 cut(s)	788
TauI	GCSGC	2 cut(s)	39, 2232
TfiI	GAWTC	8 cut(s)	320, 522, 920, 1886, 1919, 1954, 2635, 2761
Tru1I	TTAA	8 cut(s)	311, 699, 1410, 1560, 1785, 2042, 2127, 2531
Tru9I	TTAA	8 cut(s)	311, 699, 1410, 1560, 1785, 2042, 2127, 2531
TscAI	CASTG	6 cut(s)	164, 292, 1525, 2035, 2172, 2844
TseFI	GTSAC	2 cut(s)	1196, 2566
TseI	GCWGC	6 cut(s)	479, 767, 902, 1676, 1775, 2925
Tsp45I	GTSAC	2 cut(s)	1196, 2566
TspGWI	ACGGA	3 cut(s)	789, 1781, 1920
TspRI	CASTG	6 cut(s)	164, 292, 1525, 2035, 2172, 2844
Tth111I	GACNNNGTC	1 cut(s)	2199
VneI	GTGCAC	1 cut(s)	993
VpaK11BI	GGWCC	4 cut(s)	1453, 1589, 1646, 2622
XagI	CCTNNNNNAGG	1 cut(s)	2702
XapI	RAATTY	7 cut(s)	264, 435, 941, 974, 2181, 2342, 2594
XceI	RCATGY	2 cut(s)	84, 2092
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1149, 1223
XhoI	CTCGAG	1 cut(s)	1285
XmiI	GTMKAC	3 cut(s)	293, 855, 2194
XmnI	GAANNNNTTC	1 cut(s)	2741
XspI	CTAG	1 cut(s)	273
Zsp2I	ATGCAT	1 cut(s)	2061

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.