Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0010642

Physical Location & Seq

Genomic Coordinates Forward (+)

25346012 .. 25351420

Gene Structure 5409 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom10g23090.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2970 bp

ATGATGCAGTCCGTGGCTCCTGTGTGCAATGTCTGCGGCGACCAGGTGGGGCTTGGTGCCAATGGGGAGGTTTTTGTGGCGTGCCACGAGTGTAATTTCCCCATTTGCAAGGCTTGTTTCGATGATGATGTCAAGGCCGGGCGTAAAGTTTGCTTGCAGTGTGGTATTCCCTATGACGATAACCCATTGGCGGAGTATGAAACAAAGGTGTCAGGCACTCGATCCACAATGGAAGCTCACCTGAATAATTCACAGCAGGATACAGGAATTCATGCTAGGCATATCAGCAGTGTGTCTACGTTGGATAGTGAATTAAACGATGAATCTGGCAATCCGATTTGGAAGAATAGAGTGGAAAGTTGGAAGGATAAGAAGGATAAGAAGGATAAAAAGATCAAGAAGAAAAAGGATACACCTAAGGGGGAAAAAGAGGCTCAAATTCCACCTGAGAAGCAGATGACAGAGGAATATTCATCAGAGGCTGCGGAACCACTTTCAGCTGTCGTACCACTTCCATCTAACAGAATCACACCATACCGAACTGTTATAATTATGCGATTGATCATTCTCGCCCTTTTCTTCCATTATCGAGTAACAAATCCTGTTGATAGTGCTTACGGTCTATGGTTCACTTCGATCATATGTGAGATCTGGTTTGCTTTTTCTTGGGTGTTGGATCAGTTTCCTAAGTGGTCTCCAGTTAATCGGACTACATTTACTGACCGGTTATCTGCCAGGTTTGAAAGAGAGGGTGAACCCTCTGAGCTTGCTGCTGTGGATTTCTTCGTGAGTACAGTTGATCCGTTGAAAGAACCACCCTTGATTACTGCCAATACTGTGCTTTCTATCCTTGCTGTAGACTACCCTGTGGACAAAGTTTCCTGCTATGTGTCTGATGATGGTGCTGCCATGCTTACATTTGAATCCCTTGCCGAAACATCTGAATTTGCAACAAAGTGGGTTCCTTTCTGCAAGAAATTTTCAATTGAACCACGTGCACCTGAGTTTTACTTCTCACAAAAGATTGACTACTTGAAGGATAAAGTGCAACCATCTTTTGTGAAGGAGCGCAGAGCGATGAAAAGAGATTACGAAGAGTTCAAAGTGCGAATGAATGCTTTAGTAGCAAAGGCTCAAAAAACACCAGAAGAAGGATGGACTATGCAAGATGGAACTCCATGGCCAGGAAATAACTCGCGTGACCATCCTGGGATGATCCAGGTGTTCCTTGGACATAGCGGTGCCTATGACATCGAGGGAAATGAACTTCCTCGATTGGTTTATGTCTCAAGAGAGAAGAGACCCGGCTACCCACATCACAAGAAAGCTGGTGCTGAAAATGCTTTGGTAAGAGTGTCTGCGGTTCTCACAAATGCCCCATACATCCTCAACCTTGACTGTGACCACTACGTTAACAACAGCCAGGCAATTCGTGAGGCAATGTGTTTCTTGATGGACCCTCAAGTCGGTCGAGAAGTATGCTATGTGCAGTTTCCTCAGAGGTTTGAAGGTATTGATCGCAGTGATCGATATGCAAATCGCAACACAGTTTTCTTTGATGTTAACATGAAAGGACTGGATGGCATTCAAGGTCCAGTATATGTGGGGACAGGATGTTGTTTCAACAGGCAAGCACTTTACGGCTACGGTCCTCCTACTATGCCCACCTTATCCAAGGCTGCTTCCTCATCCTCCTGCTCATGGTGTGGCTGCTGCTCTTGTTGCTGTCCCTCTAAGAAGCCCTCTAAAGATGTGTCAGAGGCTTATCGAGATGCAAAACAGGAGGAGCTTGATGCTGCCATTTTTAACCTTCGTGATATTGACAATTATGATGAGCTTGAGAGGTCAATGCTGATCTCTCAGACGAGCTTTGAGAAAACTTTTGGCTTATCATCTGTATTCATCGAATCTACGCTAATGGAGAATGGAGGAGTGGCCGAATCTTCCAACCCTTCAACATTGATCAAGGAGGCGATTCACGTCATTAGCTGTGGTTATGAAGAGAAGACTGCGTGGGGAAAAGAGATTGGTTGGATATATGGATCGATCACTGAGGATATCTTAACCGGTTTCAAGATGCATTGCCGCGGATGGAGGTCAATTTACTGCATGCCCTTGAGGCCTGCATTCAAAGGGTCAGCTCCCATTAACCTTTCTGATCGACTGCACCAAGTTCTCCGGTGGGCACTGGGCTCGGTGGAAATTATTCTCAGTAGAAATTGTCCTCTCTGGTACGGGTTTGCAGGAGGCCGCCTCAAATTGCTTCAGAGAATGGCATATATCAACACTATTGTTTACCCCTTCACATCCCTCCCTCTCGTCGCTTACTGCACACTCCCTGCAATATGCCTTCTCACAGGAAAATTCATCATCCCAACACTTACAAACCTGGCAAGTGCCCTGTTTCTTGGCCTCTTTATCTCCATCATTGCTACAAGTGTGCTTGAGTTGAGGTGGAGTGGAGTCCGCATTGAGGACTTATGGCGTAACGAGCAGTTCTGGGTGATCGGAGGTGTTTCAGCCCATCTCTTTGCCGTCTTCCAAGGTTTCTTAAAGATGTTGGCCGGAATTGACACCAACTTCACCGTCACAACCAAATCAGCTGAAGACACAGAATTTGGAGAGCTCGATCTAAAGATCAAATGGACCACACTTTTGATTCCCCCAACTACACTCCTCATCATCAACATGGTTGGTGTTGTTGCAGGATTTTCGGACGCCCTTAACAAGGGATACGAAGCTTGGGGGCCACTTTTCGGGAAGGTTTTCTTTGCCTTCTGGGTGATTCTTCATCTATATCCCTTCCTCAAAGGTCTCATGGGACGCCAAAACCGGACTCCAACCATCGTTGTTTTGTGGTCAGTGCTCTTGGCCTCTGTCTTCTCCCTTGTTTGGGTGAAGATAAATCCATTTGTGAGCAAAGTGGACAGCTCAACGCTTGCTCAAAGCTGCATTTCCATAGACTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0006950 GO:0006952 GO:0006970 GO:0007049 GO:0008150 GO:0008152 GO:0008194 GO:0009058 GO:0009059 GO:0009250 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009832 GO:0009833 GO:0009834 GO:0009987 GO:0010035 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0016760 GO:0022402 GO:0030243 GO:0030244 GO:0030312 GO:0033692 GO:0034637 GO:0034645 GO:0035251 GO:0042221 GO:0042546 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0050832 GO:0050896 GO:0051273 GO:0051274 GO:0051301 GO:0051704 GO:0051707 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:0098542 GO:1901576 GO:1901700 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt WD40 zf-UDP

Protein Analysis

990

Amino Acids

110.94

Weight (kDa)

6.27

Isoelectric Point (pI)

39.24

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010642)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G18780
fragaria_vesca	FvH4_3g07420 FvH4_3g07420
malus_domestica	MD05G1296600.v1.1 MD10G1276500.v1.1
prunus_persica	Prupe.4G065700_v2.0.a1 Prupe.4G065700_v2.0.a1
pyrus_communis	pycom05g27510 pycom10g23090
rosa_chinensis	RchiOBHm_Chr5g0011441
rosa_laevigata	RLG00000031835
rosa_multiflora	Rmu_co8341655.1_g000001 Rmu_sc0009001.1_g000001
rosa_roxburghii	Rroxscaffold_1G00065000
rosa_rugosa	Rorug04G0457000
rosa_samantha	Rh5AG088900 Rh5BG084100 Rh5CG097600 Rh5DG084100
rosa_wichuraiana	Rw5G007740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	548
AasI	GACNNNNNNGTC	1 cut(s)	1463
AccB1I	GGYRCC	2 cut(s)	56, 1241
AccI	GTMKAC	2 cut(s)	296, 858
AccII	CGCG	2 cut(s)	1198, 2088
AciI	CCGC	9 cut(s)	36, 191, 485, 1239, 1361, 2086, 2088, 2251, 2467
AclWI	GGATC	5 cut(s)	216, 684, 794, 1210, 2050
AcoI	YGGCCR	3 cut(s)	1181, 1935, 2562
AcsI	RAATTY	6 cut(s)	267, 438, 944, 977, 2363, 2615
AcuI	CTGAAG	2 cut(s)	2249, 2625
AcvI	CACGTG	1 cut(s)	995
AcyI	GRCGYC	2 cut(s)	2718, 2824
AfaI	GTAC	3 cut(s)	507, 793, 2234
AgeI	ACCGGT	2 cut(s)	723, 2066
AjiI	CACGTC	1 cut(s)	1981
AjnI	CCWGG	7 cut(s)	42, 734, 1183, 1207, 1218, 1422, 2388
Alw21I	GWGCWC	3 cut(s)	1000, 2628, 2868
Alw26I	GTCTC	4 cut(s)	699, 1291, 1294, 2819
Alw44I	GTGCAC	1 cut(s)	996
AlwI	GGATC	5 cut(s)	216, 684, 794, 1210, 2050
AlwNI	CAGNNNCTG	1 cut(s)	482
AoxI	GGCC	9 cut(s)	135, 1181, 1935, 2120, 2248, 2410, 2562, 2747, 2871
ApaLI	GTGCAC	1 cut(s)	996
ApeKI	GCWGC	8 cut(s)	482, 770, 905, 1679, 1710, 1713, 1796, 2949
ApoI	RAATTY	6 cut(s)	267, 438, 944, 977, 2363, 2615
ArsI	GACNNNNNNTTYG	4 cut(s)	2600, 2632, 2638, 2670
AsiGI	ACCGGT	2 cut(s)	723, 2066
Asp700I	GAANNNNTTC	2 cut(s)	2205, 2765
AspLEI	GCGC	1 cut(s)	1071
AspS9I	GGNCC	5 cut(s)	1456, 1592, 1649, 2646, 2747
AsuC2I	CCSGG	2 cut(s)	139, 1305
AsuHPI	GGTGA	6 cut(s)	230, 764, 2515, 2575, 2794, 2908
AvaII	GGWCC	4 cut(s)	1456, 1592, 1649, 2646
AxyI	CCTNAGG	1 cut(s)	417
BaeGI	GKGCMC	3 cut(s)	1000, 2188, 2401
BalI	TGGCCA	1 cut(s)	1183
BanI	GGYRCC	2 cut(s)	56, 1241
BanII	GRGCYC	2 cut(s)	2195, 2628
BauI	CACGAG	1 cut(s)	86
BbrPI	CACGTG	1 cut(s)	995
BbsI	GAAGAC	4 cut(s)	2012, 2530, 2613, 2872
Bbv12I	GWGCWC	3 cut(s)	1000, 2628, 2868
BbvI	GCAGC	8 cut(s)	469, 757, 892, 1666, 1697, 1700, 1783, 2936
BceAI	ACGGC	2 cut(s)	1657, 2519
BcgI	CGANNNNNNTGC	6 cut(s)	1461, 1495, 2175, 2209, 2694, 2728
BciT130I	CCWGG	7 cut(s)	44, 736, 1185, 1209, 1220, 1424, 2390
BciVI	GTATCC	3 cut(s)	253, 403, 2726
BclI	TGATCA	2 cut(s)	561, 1962
BcnI	CCSGG	2 cut(s)	139, 1305
BcoDI	GTCTC	4 cut(s)	699, 1291, 1294, 2819
BfaI	CTAG	1 cut(s)	276
BfmI	CTRYAG	1 cut(s)	855
BfuI	GTATCC	3 cut(s)	253, 403, 2726
BglI	GCCNNNNNGGC	1 cut(s)	2119
BglII	AGATCT	1 cut(s)	648
Bme1390I	CCNGG	9 cut(s)	44, 139, 736, 1185, 1209, 1220, 1305, 1424, 2390
Bme18I	GGWCC	4 cut(s)	1456, 1592, 1649, 2646
BmgBI	CACGTC	1 cut(s)	1981
BmgT120I	GGNCC	5 cut(s)	1456, 1592, 1649, 2646, 2747
BmiI	GGNNCC	7 cut(s)	18, 58, 489, 963, 1243, 1458, 2748
BmrFI	CCNGG	9 cut(s)	44, 139, 736, 1185, 1209, 1220, 1305, 1424, 2390
BmrI	ACTGGG	1 cut(s)	2198
BmsI	GCATC	3 cut(s)	1762, 1783, 2067
BmuI	ACTGGG	1 cut(s)	2198
BpiI	GAAGAC	4 cut(s)	2012, 2530, 2613, 2872
BplI	GAGNNNNNCTC	2 cut(s)	2238, 2270
BpmI	CTGGAG	1 cut(s)	681
BpuEI	CTTGAG	5 cut(s)	1273, 1446, 1859, 2137, 2465
BpuMI	CCSGG	2 cut(s)	139, 1305
Bsa29I	ATCGAT	2 cut(s)	1528, 2045
BsaAI	YACGTR	1 cut(s)	995
BsaHI	GRCGYC	2 cut(s)	2718, 2824
BsaI	GGTCTC	3 cut(s)	699, 1294, 2819
BsaJI	CCNNGG	7 cut(s)	12, 1178, 1208, 1228, 1674, 2086, 2542
BsaWI	WCCGGW	4 cut(s)	723, 2066, 2178, 2832
Bse118I	RCCGGY	2 cut(s)	723, 2066
Bse1I	ACTGG	4 cut(s)	698, 1581, 1595, 2193
Bse21I	CCTNAGG	1 cut(s)	417
Bse3DI	GCAATG	4 cut(s)	34, 1446, 2080, 2427
BseBI	CCWGG	7 cut(s)	44, 736, 1185, 1209, 1220, 1424, 2390
BseCI	ATCGAT	2 cut(s)	1528, 2045
BseDI	CCNNGG	7 cut(s)	12, 1178, 1208, 1228, 1674, 2086, 2542
BseMI	GCAATG	4 cut(s)	34, 1446, 2080, 2427
BseMII	CTCAG	7 cut(s)	438, 753, 993, 1511, 1874, 2043, 2224
BseNI	ACTGG	4 cut(s)	698, 1581, 1595, 2193
BseRI	GAGGAG	3 cut(s)	1799, 1944, 2666
BseSI	GKGCMC	3 cut(s)	1000, 2188, 2401
BseXI	GCAGC	8 cut(s)	469, 757, 892, 1666, 1697, 1700, 1783, 2936
BsgI	GTGCAG	3 cut(s)	1508, 2150, 2314
Bsh1236I	CGCG	2 cut(s)	1198, 2088
Bsh1285I	CGRYCG	1 cut(s)	1471
BshFI	GGCC	9 cut(s)	137, 1183, 1937, 2122, 2250, 2412, 2564, 2749, 2873
BshNI	GGYRCC	2 cut(s)	56, 1241
BshTI	ACCGGT	2 cut(s)	723, 2066
BshVI	ATCGAT	2 cut(s)	1528, 2045
BsiEI	CGRYCG	1 cut(s)	1471
BsiHKAI	GWGCWC	3 cut(s)	1000, 2628, 2868
BsiSI	CCGG	7 cut(s)	138, 724, 1305, 2067, 2179, 2565, 2833
BslFI	GGGAC	3 cut(s)	1621, 1713, 2835
BsmAI	GTCTC	4 cut(s)	699, 1291, 1294, 2819
BsmFI	GGGAC	3 cut(s)	1621, 1713, 2835
BsmI	GAATGC	3 cut(s)	1120, 1584, 2126
BsnI	GGCC	9 cut(s)	137, 1183, 1937, 2122, 2250, 2412, 2564, 2749, 2873
Bso31I	GGTCTC	3 cut(s)	699, 1294, 2819
Bsp1286I	GDGCHC	6 cut(s)	1000, 2188, 2195, 2401, 2628, 2868
Bsp19I	CCATGG	1 cut(s)	1178
BspACI	CCGC	9 cut(s)	36, 191, 485, 1239, 1361, 2086, 2088, 2251, 2467
BspANI	GGCC	9 cut(s)	137, 1183, 1937, 2122, 2250, 2412, 2564, 2749, 2873
BspCNI	CTCAG	7 cut(s)	439, 754, 994, 1510, 1873, 2044, 2223
BspDI	ATCGAT	2 cut(s)	1528, 2045
BspFNI	CGCG	2 cut(s)	1198, 2088
BspLI	GGNNCC	7 cut(s)	18, 58, 489, 963, 1243, 1458, 2748
BspPI	GGATC	5 cut(s)	216, 684, 794, 1210, 2050
BspT107I	GGYRCC	2 cut(s)	56, 1241
BspTNI	GGTCTC	3 cut(s)	699, 1294, 2819
BsrDI	GCAATG	4 cut(s)	34, 1446, 2080, 2427
BsrFI	RCCGGY	2 cut(s)	723, 2066
BsrI	ACTGG	4 cut(s)	698, 1581, 1595, 2193
BssAI	RCCGGY	2 cut(s)	723, 2066
BssECI	CCNNGG	7 cut(s)	12, 1178, 1208, 1228, 1674, 2086, 2542
BssNI	GRCGYC	2 cut(s)	2718, 2824
BssSI	CACGAG	1 cut(s)	86
BssT1I	CCWWGG	4 cut(s)	1178, 1228, 1674, 2542
Bst2BI	CACGAG	1 cut(s)	86
Bst2UI	CCWGG	7 cut(s)	44, 736, 1185, 1209, 1220, 1424, 2390
Bst4CI	ACNGT	8 cut(s)	544, 620, 796, 838, 1400, 1549, 1649, 2587
Bst6I	CTCTTC	3 cut(s)	1089, 1292, 1995
BstACI	GRCGYC	2 cut(s)	2718, 2824
BstAPI	GCANNNNNTGC	1 cut(s)	33
BstBAI	YACGTR	1 cut(s)	995
BstC8I	GCNNGC	7 cut(s)	82, 155, 768, 1632, 2111, 2124, 2940
BstDSI	CCRYGG	3 cut(s)	12, 1178, 2086
BstENI	CCTNNNNNAGG	1 cut(s)	2726
BstFNI	CGCG	2 cut(s)	1198, 2088
BstHHI	GCGC	1 cut(s)	1071
BstMAI	GTCTC	4 cut(s)	699, 1291, 1294, 2819
BstMCI	CGRYCG	1 cut(s)	1471
BstMWI	GCNNNNNNNGC	6 cut(s)	33, 1124, 1340, 1722, 2119, 2491
BstNI	CCWGG	7 cut(s)	44, 736, 1185, 1209, 1220, 1424, 2390
BstNSI	RCATGY	1 cut(s)	2113
BstSCI	CCNGG	9 cut(s)	42, 137, 734, 1183, 1207, 1218, 1303, 1422, 2388
BstSFI	CTRYAG	1 cut(s)	855
BstSLI	GKGCMC	3 cut(s)	1000, 2188, 2401
BstUI	CGCG	2 cut(s)	1198, 2088
BstV1I	GCAGC	8 cut(s)	469, 757, 892, 1666, 1697, 1700, 1783, 2936
BstV2I	GAAGAC	4 cut(s)	2012, 2530, 2613, 2872
BstX2I	RGATCY	1 cut(s)	648
BstYI	RGATCY	1 cut(s)	648
Bsu15I	ATCGAT	2 cut(s)	1528, 2045
Bsu36I	CCTNAGG	1 cut(s)	417
BsuI	GTATCC	3 cut(s)	253, 403, 2726
BsuRI	GGCC	9 cut(s)	137, 1183, 1937, 2122, 2250, 2412, 2564, 2749, 2873
BsuTUI	ATCGAT	2 cut(s)	1528, 2045
BtgI	CCRYGG	3 cut(s)	12, 1178, 2086
BtgZI	GCGATG	1 cut(s)	1091
BtrI	CACGTC	1 cut(s)	1981
BtsI	GCAGTG	3 cut(s)	164, 295, 1528
BtsIMutI	CAGTG	6 cut(s)	164, 295, 1528, 2049, 2186, 2868
Cac8I	GCNNGC	7 cut(s)	82, 155, 768, 1632, 2111, 2124, 2940
CaiI	CAGNNNCTG	1 cut(s)	482
CfoI	GCGC	1 cut(s)	1071
Cfr10I	RCCGGY	2 cut(s)	723, 2066
Cfr13I	GGNCC	5 cut(s)	1456, 1592, 1649, 2646, 2747
Cfr42I	CCGCGG	1 cut(s)	2089
ClaI	ATCGAT	2 cut(s)	1528, 2045
CseI	GACGC	2 cut(s)	2726, 2832
CsiI	ACCWGGT	1 cut(s)	42
Csp6I	GTAC	3 cut(s)	506, 792, 2233
CspAI	ACCGGT	2 cut(s)	723, 2066
CviAII	CATG	8 cut(s)	272, 910, 1179, 1567, 1701, 2110, 2689, 2818
CviQI	GTAC	3 cut(s)	506, 792, 2233
DrdI	GACNNNNNNGTC	1 cut(s)	1463
DseDI	GACNNNNNNGTC	1 cut(s)	1463
EaeI	YGGCCR	3 cut(s)	1181, 1935, 2562
Eam1104I	CTCTTC	3 cut(s)	1089, 1292, 1995
EarI	CTCTTC	3 cut(s)	1089, 1292, 1995
EciI	GGCGGA	1 cut(s)	206
Ecl136II	GAGCTC	1 cut(s)	2626
Eco130I	CCWWGG	4 cut(s)	1178, 1228, 1674, 2542
Eco147I	AGGCCT	1 cut(s)	2122
Eco24I	GRGCYC	2 cut(s)	2195, 2628
Eco31I	GGTCTC	3 cut(s)	699, 1294, 2819
Eco32I	GATATC	1 cut(s)	2059
Eco47I	GGWCC	4 cut(s)	1456, 1592, 1649, 2646
Eco53kI	GAGCTC	1 cut(s)	2626
Eco57I	CTGAAG	2 cut(s)	2249, 2625
Eco72I	CACGTG	1 cut(s)	995
Eco81I	CCTNAGG	1 cut(s)	417
EcoICRI	GAGCTC	1 cut(s)	2626
EcoNI	CCTNNNNNAGG	1 cut(s)	2726
EcoRI	GAATTC	1 cut(s)	267
EcoRII	CCWGG	7 cut(s)	42, 734, 1183, 1207, 1218, 1422, 2388
EcoRV	GATATC	1 cut(s)	2059
EcoT14I	CCWWGG	4 cut(s)	1178, 1228, 1674, 2542
EcoT22I	ATGCAT	1 cut(s)	2082
EcoT38I	GRGCYC	2 cut(s)	2195, 2628
ErhI	CCWWGG	4 cut(s)	1178, 1228, 1674, 2542
FaeI	CATG	8 cut(s)	275, 913, 1182, 1570, 1704, 2113, 2692, 2821
FalI	AAGNNNNNCTT	2 cut(s)	2753, 2785
FaqI	GGGAC	3 cut(s)	1621, 1713, 2835
FatI	CATG	8 cut(s)	271, 909, 1178, 1566, 1700, 2109, 2688, 2817
FauNDI	CATATG	1 cut(s)	641
FbaI	TGATCA	2 cut(s)	561, 1962
FblI	GTMKAC	2 cut(s)	296, 858
FriOI	GRGCYC	2 cut(s)	2195, 2628
FspBI	CTAG	1 cut(s)	276
GlaI	GCGC	1 cut(s)	1070
GsuI	CTGGAG	1 cut(s)	681
HaeIII	GGCC	9 cut(s)	137, 1183, 1937, 2122, 2250, 2412, 2564, 2749, 2873
HapII	CCGG	7 cut(s)	138, 724, 1305, 2067, 2179, 2565, 2833
HgaI	GACGC	2 cut(s)	2726, 2832
HhaI	GCGC	1 cut(s)	1071
Hin1I	GRCGYC	2 cut(s)	2718, 2824
Hin1II	CATG	8 cut(s)	275, 913, 1182, 1570, 1704, 2113, 2692, 2821
Hin6I	GCGC	1 cut(s)	1069
HinP1I	GCGC	1 cut(s)	1069
HincII	GTYRAC	2 cut(s)	1414, 1564
HindII	GTYRAC	2 cut(s)	1414, 1564
HindIII	AAGCTT	1 cut(s)	2739
HpaI	GTTAAC	2 cut(s)	1414, 1564
HpaII	CCGG	7 cut(s)	138, 724, 1305, 2067, 2179, 2565, 2833
HphI	GGTGA	6 cut(s)	230, 764, 2515, 2575, 2794, 2908
Hpy99I	CGWCG	1 cut(s)	2324
HpyCH4III	ACNGT	8 cut(s)	544, 620, 796, 838, 1400, 1549, 1649, 2587
HpyCH4IV	ACGT	4 cut(s)	299, 994, 1410, 1980
HpyF10VI	GCNNNNNNNGC	6 cut(s)	33, 1124, 1340, 1722, 2119, 2491
HpySE526I	ACGT	4 cut(s)	299, 994, 1410, 1980
Hsp92I	GRCGYC	2 cut(s)	2718, 2824
Hsp92II	CATG	8 cut(s)	275, 913, 1182, 1570, 1704, 2113, 2692, 2821
HspAI	GCGC	1 cut(s)	1069
Ksp22I	TGATCA	2 cut(s)	561, 1962
KspAI	GTTAAC	2 cut(s)	1414, 1564
KspI	CCGCGG	1 cut(s)	2089
LmnI	GCTCC	4 cut(s)	22, 1066, 1786, 2146
Lsp1109I	GCAGC	8 cut(s)	469, 757, 892, 1666, 1697, 1700, 1783, 2936
LweI	GCATC	3 cut(s)	1762, 1783, 2067
MabI	ACCWGGT	1 cut(s)	42
MaeI	CTAG	1 cut(s)	276
MaeII	ACGT	4 cut(s)	299, 994, 1410, 1980
MaeIII	GTNAC	5 cut(s)	592, 1199, 1400, 2486, 2587
MfeI	CAATTG	1 cut(s)	984
MflI	RGATCY	1 cut(s)	648
MhlI	GDGCHC	6 cut(s)	1000, 2188, 2195, 2401, 2628, 2868
MlsI	TGGCCA	1 cut(s)	1183
MluNI	TGGCCA	1 cut(s)	1183
MlyI	GAGTC	2 cut(s)	2472, 2830
MmeI	TCCRAC	6 cut(s)	282, 341, 654, 1971, 2012, 2864
Mox20I	TGGCCA	1 cut(s)	1183
Mph1103I	ATGCAT	1 cut(s)	2082
MroXI	GAANNNNTTC	2 cut(s)	2205, 2765
MscI	TGGCCA	1 cut(s)	1183
MseI	TTAA	9 cut(s)	314, 702, 1413, 1563, 1806, 2063, 2148, 2552, 2724
MslI	CAYNNNNRTG	2 cut(s)	1239, 2687
Msp20I	TGGCCA	1 cut(s)	1183
MspA1I	CMGCKG	3 cut(s)	500, 2088, 2603
MspI	CCGG	7 cut(s)	138, 724, 1305, 2067, 2179, 2565, 2833
MspR9I	CCNGG	9 cut(s)	44, 139, 736, 1185, 1209, 1220, 1305, 1424, 2390
MunI	CAATTG	1 cut(s)	984
Mva1269I	GAATGC	3 cut(s)	1120, 1584, 2126
MvaI	CCWGG	7 cut(s)	44, 736, 1185, 1209, 1220, 1424, 2390
MvnI	CGCG	2 cut(s)	1198, 2088
MwoI	GCNNNNNNNGC	6 cut(s)	33, 1124, 1340, 1722, 2119, 2491
NciI	CCSGG	2 cut(s)	139, 1305
NcoI	CCATGG	1 cut(s)	1178
NdeI	CATATG	1 cut(s)	641
NlaIII	CATG	8 cut(s)	275, 913, 1182, 1570, 1704, 2113, 2692, 2821
NlaIV	GGNNCC	7 cut(s)	18, 58, 489, 963, 1243, 1458, 2748
NmuCI	GTSAC	3 cut(s)	1199, 1400, 2587
NsiI	ATGCAT	1 cut(s)	2082
NspI	RCATGY	1 cut(s)	2113
PaeI	GCATGC	1 cut(s)	2113
PceI	AGGCCT	1 cut(s)	2122
PcsI	WCGNNNNNNNCGW	1 cut(s)	1525
PctI	GAATGC	3 cut(s)	1120, 1584, 2126
PdmI	GAANNNNTTC	2 cut(s)	2205, 2765
PfeI	GAWTC	8 cut(s)	323, 525, 923, 1907, 1940, 1975, 2659, 2785
PinAI	ACCGGT	2 cut(s)	723, 2066
PleI	GAGTC	2 cut(s)	2471, 2830
PmaCI	CACGTG	1 cut(s)	995
PmlI	CACGTG	1 cut(s)	995
PpsI	GAGTC	2 cut(s)	2471, 2830
Ppu21I	YACGTR	1 cut(s)	995
PsiI	TTATAA	1 cut(s)	548
Psp124BI	GAGCTC	1 cut(s)	2628
Psp6I	CCWGG	7 cut(s)	42, 734, 1183, 1207, 1218, 1422, 2388
PspCI	CACGTG	1 cut(s)	995
PspGI	CCWGG	7 cut(s)	42, 734, 1183, 1207, 1218, 1422, 2388
PspN4I	GGNNCC	7 cut(s)	18, 58, 489, 963, 1243, 1458, 2748
PspPI	GGNCC	5 cut(s)	1456, 1592, 1649, 2646, 2747
PstNI	CAGNNNCTG	1 cut(s)	482
PsuI	RGATCY	1 cut(s)	648
PvuII	CAGCTG	2 cut(s)	500, 2603
RsaI	GTAC	3 cut(s)	507, 793, 2234
RsaNI	GTAC	3 cut(s)	506, 792, 2233
RseI	CAYNNNNRTG	2 cut(s)	1239, 2687
SacI	GAGCTC	1 cut(s)	2628
SacII	CCGCGG	1 cut(s)	2089
SaqAI	TTAA	9 cut(s)	314, 702, 1413, 1563, 1806, 2063, 2148, 2552, 2724
Sau96I	GGNCC	5 cut(s)	1456, 1592, 1649, 2646, 2747
SchI	GAGTC	2 cut(s)	2472, 2830
ScrFI	CCNGG	9 cut(s)	44, 139, 736, 1185, 1209, 1220, 1305, 1424, 2390
SduI	GDGCHC	6 cut(s)	1000, 2188, 2195, 2401, 2628, 2868
SexAI	ACCWGGT	1 cut(s)	42
SfaNI	GCATC	3 cut(s)	1762, 1783, 2067
SfcI	CTRYAG	1 cut(s)	855
Sfr303I	CCGCGG	1 cut(s)	2089
SgrBI	CCGCGG	1 cut(s)	2089
SinI	GGWCC	4 cut(s)	1456, 1592, 1649, 2646
SmiMI	CAYNNNNRTG	2 cut(s)	1239, 2687
SmlI	CTYRAG	5 cut(s)	1288, 1461, 1838, 2116, 2444
SmoI	CTYRAG	5 cut(s)	1288, 1461, 1838, 2116, 2444
SphI	GCATGC	1 cut(s)	2113
SseBI	AGGCCT	1 cut(s)	2122
SsiI	CCGC	9 cut(s)	36, 191, 485, 1239, 1361, 2086, 2088, 2251, 2467
SspI	AATATT	1 cut(s)	470
SspMI	CTAG	1 cut(s)	276
SstI	GAGCTC	1 cut(s)	2628
StuI	AGGCCT	1 cut(s)	2122
StyD4I	CCNGG	9 cut(s)	42, 137, 734, 1183, 1207, 1218, 1303, 1422, 2388
StyI	CCWWGG	4 cut(s)	1178, 1228, 1674, 2542
TaaI	ACNGT	8 cut(s)	544, 620, 796, 838, 1400, 1549, 1649, 2587
TaiI	ACGT	4 cut(s)	302, 997, 1413, 1983
TaqII	GACCGA	1 cut(s)	1457
TatI	WGTACW	1 cut(s)	791
TauI	GCSGC	3 cut(s)	39, 2088, 2253
TfiI	GAWTC	8 cut(s)	323, 525, 923, 1907, 1940, 1975, 2659, 2785
Tru1I	TTAA	9 cut(s)	314, 702, 1413, 1563, 1806, 2063, 2148, 2552, 2724
Tru9I	TTAA	9 cut(s)	314, 702, 1413, 1563, 1806, 2063, 2148, 2552, 2724
TscAI	CASTG	6 cut(s)	164, 295, 1528, 2056, 2193, 2868
TseFI	GTSAC	3 cut(s)	1199, 1400, 2587
TseI	GCWGC	8 cut(s)	482, 770, 905, 1679, 1710, 1713, 1796, 2949
Tsp45I	GTSAC	3 cut(s)	1199, 1400, 2587
TspGWI	ACGGA	1 cut(s)	792
TspRI	CASTG	6 cut(s)	164, 295, 1528, 2056, 2193, 2868
VneI	GTGCAC	1 cut(s)	996
VpaK11BI	GGWCC	4 cut(s)	1456, 1592, 1649, 2646
XagI	CCTNNNNNAGG	1 cut(s)	2726
XapI	RAATTY	6 cut(s)	267, 438, 944, 977, 2363, 2615
XceI	RCATGY	1 cut(s)	2113
XcmI	CCANNNNNNNNNTGG	3 cut(s)	50, 1152, 1226
XmiI	GTMKAC	2 cut(s)	296, 858
XmnI	GAANNNNTTC	2 cut(s)	2205, 2765
XspI	CTAG	1 cut(s)	276
Zsp2I	ATGCAT	1 cut(s)	2082

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.