FvH4_3g07630

CBL-interacting protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Reverse (-)
4492649 .. 4494783
2135 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g07630.t1

Sequence Viewer

Length: 1395 bp
ATGTCCAAAATGGAGAACAAGAAAGCAAACATATTGATGCACAAGTACGAGCTGGGGCGCCTTCTCGGGAAAGGTACTTTCGCCAAGGTTTACCATGCTCGAAACTTGAGGACCGGCCAAAGTGTTGCCATTAAGATCATAGACAAAGAGAAGGTGCAACAGGTTGGATTGATTGATCAAATCAAGCGTGAAATTTCGGTCATGCGCCTTGTTAGGCACCCCAATGTTGTTCAGCTCTATGAAGTGATGGCCAGCAAGACCAAAATCTACTTTGCCATGGAGTATGTGAAAGGTGGTGAGCTCTTCAACAAGGTTGCCAAAGGGAAGCTCAAGGAAGACATAGCCCGAAAATACTTCCAACAGTTGATTGGAGCCGTTGATTACTGCCACAGCCGCGGAGTTTATCACCGTGACATCAAGCCAGAGAATCTCCTGGTTGATGAGCATGGTAACCTCAAGGTCTCAGATTTCGGGCTGAGTGCATTGATAGAGTCAAGAGGTCAAGATGGTCTGTTGCACACCACTTGCGGAACTCCTGCTTATGTAGCACCAGAAGTGATCAACAAGAAAGGTTATGATGGTGCCAAGGCAGATACATGGTCATGCGGGGTAGTCCTGTATGTTCTTTTAGCTGGTTTTCTTCCATTCCACGACACAAATCTCATGGAAATGTACAGGAAGATCAGCAGAGGAGACTTCAAGAGTCCACAATGGTTCCCTCCAGAGGTTCGTAAGCTACTTGCACGGATTCTTGATCCGAATGCCACCATGAGAATAAGCGTGGATAAGATCATGGAGAACAGTTGGTTTAAGAAGGGGTTTAAGCATATTGATGCCCCGTTACCAATTCCATGTGATCCAAGCACATCTATCAGTGATGTGCATTCTGCTTTTGGATCACCAGACAGTTCAGAAGGCAGTTCTAATAGGAAAGCGGAAACTACTAATGCAGCAAGCCCCATGAGGCCAACTAACTTCAATGCCTTCGACATCATATCTCTCTCACCGGGATTTGATCTATCTGGTTTGTTTGAGGGTGATCACAAGCATAGATCATCACAGTCACGATTCACCACTACAAAACCAGCATCTACTATTGTTTCGAAATTTGAACAGATTGCACAAATGGAGAGATTCAGATGCATGCAGAAGGACGGGACTGTCAAATTGCAGGGCAGCAGGGAAGGAAGGAAAGGGCAGCTTGGTATTGATGCTGAGATTTTCGAAGTCACACCTTCGTTTTTCGTTGTGGAGGTGAAGAAAACAGCTGGGGACACATTGGAATACATTCAATTCTATGACCATGATTTAAAGCCCTCTCTTAAGGACATAGTATGGACTTGGCAAGGAAATGATCCACAGCAGCAACACCAGCCAGCAACTCAAGTCTCTTGA

Protein Analysis

465

Amino Acids

52.29

Weight (kDa)

9.16

Isoelectric Point (pI)

33.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 16 - 270 1.3e-75 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 17 - 266 4e-41 Protein tyrosine and serine/threonine kinase
Kinase-like PF14531 107 - 257 5.8e-09 Kinase-like
NAF PF03822 323 - 380 4e-20 NAF domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015822)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G45820
fragaria_vesca FvH4_3g07630
malus_domestica MD05G1298900.v1.1 MD10G1278400.v1.1
prunus_persica Prupe.4G062900_v2.0.a1
rosa_chinensis RchiOBHm_Chr5g0011061
rosa_laevigata RLG00000031806
rosa_multiflora Rmu_sc0003242.1_g000007
rosa_roxburghii Rroxscaffold_1G00065350
rosa_rugosa Rorug04G0454900
rosa_samantha Rh5AG087000 Rh5BG081900 Rh5CG094700
rosa_wichuraiana Rw0G000150 Rw0G017800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1160
AccB1I GGYRCC 3 cut(s) 57, 216, 581
AccII CGCG 1 cut(s) 396
AciI CCGC 5 cut(s) 394, 396, 528, 606, 935
AclWI GGATC 4 cut(s) 749, 851, 904, 1349
AcoI YGGCCR 2 cut(s) 115, 249
AcsI RAATTY 2 cut(s) 192, 1106
AcyI GRCGYC 1 cut(s) 58
AfaI GTAC 3 cut(s) 47, 76, 674
AfiI CCNNNNNNNGG 1 cut(s) 724
AflII CTTAAG 1 cut(s) 1322
AgsI TTSAA 5 cut(s) 307, 700, 979, 1112, 1292
AjnI CCWGG 1 cut(s) 432
AluBI AGCT 8 cut(s) 52, 235, 301, 328, 632, 736, 1201, 1268
AluI AGCT 8 cut(s) 52, 235, 301, 328, 632, 736, 1201, 1268
Alw21I GWGCWC 1 cut(s) 303
Alw26I GTCTC 2 cut(s) 466, 687
AlwI GGATC 4 cut(s) 749, 851, 904, 1349
Ama87I CYCGRG 1 cut(s) 65
AoxI GGCC 3 cut(s) 115, 249, 965
ApeKI GCWGC 4 cut(s) 950, 1176, 1198, 1363
ApoI RAATTY 2 cut(s) 192, 1106
Asp700I GAANNNNTTC 1 cut(s) 1287
AspLEI GCGC 2 cut(s) 60, 207
AspS9I GGNCC 1 cut(s) 111
AsuC2I CCSGG 1 cut(s) 1008
AsuHPI GGTGA 7 cut(s) 308, 398, 891, 996, 1049, 1063, 1267
AsuII TTCGAA 2 cut(s) 1103, 1224
AvaI CYCGRG 1 cut(s) 65
AvaII GGWCC 1 cut(s) 111
BalI TGGCCA 1 cut(s) 251
BanI GGYRCC 3 cut(s) 57, 216, 581
BanII GRGCYC 1 cut(s) 303
BbsI GAAGAC 1 cut(s) 342
Bbv12I GWGCWC 1 cut(s) 303
BbvI GCAGC 4 cut(s) 962, 1188, 1210, 1375
BccI CCATC 3 cut(s) 241, 500, 572
BceAI ACGGC 1 cut(s) 359
BciT130I CCWGG 1 cut(s) 434
BclI TGATCA 3 cut(s) 175, 558, 1039
BcnI CCSGG 1 cut(s) 1008
BcoDI GTCTC 2 cut(s) 466, 687
BfoI RGCGCY 1 cut(s) 61
BfrI CTTAAG 1 cut(s) 1322
BisI GCNGC 5 cut(s) 394, 951, 1177, 1199, 1364
BlsI GCNGC 5 cut(s) 395, 952, 1178, 1200, 1365
Bme1390I CCNGG 2 cut(s) 434, 1008
Bme18I GGWCC 1 cut(s) 111
BmeT110I CYCGRG 1 cut(s) 65
BmgT120I GGNCC 1 cut(s) 111
BmiI GGNNCC 5 cut(s) 59, 218, 373, 583, 716
BmrFI CCNGG 2 cut(s) 434, 1008
BmsI GCATC 5 cut(s) 27, 823, 1097, 1130, 1201
BpiI GAAGAC 1 cut(s) 342
BpmI CTGGAG 1 cut(s) 705
Bpu14I TTCGAA 2 cut(s) 1103, 1224
BpuEI CTTGAG 4 cut(s) 127, 314, 440, 1368
BpuMI CCSGG 1 cut(s) 1008
BsaHI GRCGYC 1 cut(s) 58
BsaI GGTCTC 1 cut(s) 466
BsaJI CCNNGG 4 cut(s) 84, 276, 394, 585
Bsc4I CCNNNNNNNGG 1 cut(s) 724
Bse118I RCCGGY 1 cut(s) 113
BseBI CCWGG 1 cut(s) 434
BseDI CCNNGG 4 cut(s) 84, 276, 394, 585
BseLI CCNNNNNNNGG 1 cut(s) 724
BseMII CTCAG 3 cut(s) 467, 477, 1206
BseRI GAGGAG 1 cut(s) 705
BseXI GCAGC 4 cut(s) 962, 1188, 1210, 1375
BseYI CCCAGC 2 cut(s) 52, 1268
Bsh1236I CGCG 1 cut(s) 396
BshFI GGCC 3 cut(s) 117, 251, 967
BshNI GGYRCC 3 cut(s) 57, 216, 581
BsiHKAI GWGCWC 1 cut(s) 303
BsiHKCI CYCGRG 1 cut(s) 65
BsiSI CCGG 2 cut(s) 114, 1007
BslFI GGGAC 2 cut(s) 1171, 1286
BslI CCNNNNNNNGG 1 cut(s) 724
BsmAI GTCTC 2 cut(s) 466, 687
BsmFI GGGAC 2 cut(s) 1171, 1286
BsmI GAATGC 2 cut(s) 766, 883
BsnI GGCC 3 cut(s) 117, 251, 967
Bso31I GGTCTC 1 cut(s) 466
BsoBI CYCGRG 1 cut(s) 65
Bsp119I TTCGAA 2 cut(s) 1103, 1224
Bsp1286I GDGCHC 1 cut(s) 303
Bsp1407I TGTACA 1 cut(s) 672
Bsp19I CCATGG 1 cut(s) 276
BspACI CCGC 5 cut(s) 394, 396, 528, 606, 935
BspANI GGCC 3 cut(s) 117, 251, 967
BspCNI CTCAG 3 cut(s) 468, 476, 1207
BspFNI CGCG 1 cut(s) 396
BspLI GGNNCC 5 cut(s) 59, 218, 373, 583, 716
BspPI GGATC 4 cut(s) 749, 851, 904, 1349
BspQI GCTCTTC 1 cut(s) 308
BspT104I TTCGAA 2 cut(s) 1103, 1224
BspT107I GGYRCC 3 cut(s) 57, 216, 581
BspTI CTTAAG 1 cut(s) 1322
BspTNI GGTCTC 1 cut(s) 466
BsrFI RCCGGY 1 cut(s) 113
BsrGI TGTACA 1 cut(s) 672
BssAI RCCGGY 1 cut(s) 113
BssECI CCNNGG 4 cut(s) 84, 276, 394, 585
BssNI GRCGYC 1 cut(s) 58
BssT1I CCWWGG 3 cut(s) 84, 276, 585
Bst2UI CCWGG 1 cut(s) 434
Bst4CI ACNGT 6 cut(s) 363, 410, 803, 908, 1062, 1162
Bst6I CTCTTC 1 cut(s) 308
BstACI GRCGYC 1 cut(s) 58
BstAFI CTTAAG 1 cut(s) 1322
BstAUI TGTACA 1 cut(s) 672
BstBI TTCGAA 2 cut(s) 1103, 1224
BstC8I GCNNGC 4 cut(s) 253, 955, 1145, 1377
BstDEI CTNAG 3 cut(s) 463, 476, 1215
BstDSI CCRYGG 2 cut(s) 276, 394
BstEII GGTNACC 1 cut(s) 449
BstFNI CGCG 1 cut(s) 396
BstH2I RGCGCY 1 cut(s) 61
BstHHI GCGC 2 cut(s) 60, 207
BstMAI GTCTC 2 cut(s) 466, 687
BstMWI GCNNNNNNNGC 3 cut(s) 393, 545, 1372
BstNI CCWGG 1 cut(s) 434
BstNSI RCATGY 1 cut(s) 1147
BstPI GGTNACC 1 cut(s) 449
BstSCI CCNGG 2 cut(s) 432, 1006
BstUI CGCG 1 cut(s) 396
BstV1I GCAGC 4 cut(s) 962, 1188, 1210, 1375
BstV2I GAAGAC 1 cut(s) 342
BsuRI GGCC 3 cut(s) 117, 251, 967
BtgI CCRYGG 2 cut(s) 276, 394
BtsIMutI CAGTG 1 cut(s) 880
Cac8I GCNNGC 4 cut(s) 253, 955, 1145, 1377
CfoI GCGC 2 cut(s) 60, 207
Cfr10I RCCGGY 1 cut(s) 113
Cfr13I GGNCC 1 cut(s) 111
Cfr42I CCGCGG 1 cut(s) 397
Csp6I GTAC 3 cut(s) 46, 75, 673
CviQI GTAC 3 cut(s) 46, 75, 673
DdeI CTNAG 3 cut(s) 463, 476, 1215
DinI GGCGCC 1 cut(s) 59
DraI TTTAAA 1 cut(s) 1311
DrdI GACNNNNNNGTC 1 cut(s) 1160
DseDI GACNNNNNNGTC 1 cut(s) 1160
EaeI YGGCCR 2 cut(s) 115, 249
Eam1104I CTCTTC 1 cut(s) 308
EarI CTCTTC 1 cut(s) 308
Ecl136II GAGCTC 1 cut(s) 301
Eco130I CCWWGG 3 cut(s) 84, 276, 585
Eco24I GRGCYC 1 cut(s) 303
Eco31I GGTCTC 1 cut(s) 466
Eco47I GGWCC 1 cut(s) 111
Eco53kI GAGCTC 1 cut(s) 301
Eco88I CYCGRG 1 cut(s) 65
Eco91I GGTNACC 1 cut(s) 449
EcoICRI GAGCTC 1 cut(s) 301
EcoO65I GGTNACC 1 cut(s) 449
EcoRII CCWGG 1 cut(s) 432
EcoT14I CCWWGG 3 cut(s) 84, 276, 585
EcoT22I ATGCAT 1 cut(s) 1145
EcoT38I GRGCYC 1 cut(s) 303
EgeI GGCGCC 1 cut(s) 59
EheI GGCGCC 1 cut(s) 59
ErhI CCWWGG 3 cut(s) 84, 276, 585
FalI AAGNNNNNCTT 2 cut(s) 1185, 1217
FaqI GGGAC 2 cut(s) 1171, 1286
FauI CCCGC 1 cut(s) 599
FbaI TGATCA 3 cut(s) 175, 558, 1039
Fnu4HI GCNGC 5 cut(s) 394, 951, 1177, 1199, 1364
FriOI GRGCYC 1 cut(s) 303
Fsp4HI GCNGC 5 cut(s) 394, 951, 1177, 1199, 1364
GlaI GCGC 2 cut(s) 59, 206
GluI GCNGC 5 cut(s) 394, 951, 1177, 1199, 1364
GsaI CCCAGC 2 cut(s) 56, 1272
GsuI CTGGAG 1 cut(s) 705
HaeII RGCGCY 1 cut(s) 61
HaeIII GGCC 3 cut(s) 117, 251, 967
HapII CCGG 2 cut(s) 114, 1007
HhaI GCGC 2 cut(s) 60, 207
Hin1I GRCGYC 1 cut(s) 58
Hin6I GCGC 2 cut(s) 58, 205
HinP1I GCGC 2 cut(s) 58, 205
HinfI GANTC 6 cut(s) 427, 491, 703, 748, 1068, 1134
HpaII CCGG 2 cut(s) 114, 1007
HphI GGTGA 7 cut(s) 308, 398, 891, 996, 1049, 1063, 1267
Hpy166II GTNNAC 2 cut(s) 91, 707
Hpy188I TCNGA 4 cut(s) 466, 759, 913, 1139
Hpy188III TCNNGA 8 cut(s) 67, 495, 503, 700, 722, 752, 1065, 1392
Hpy8I GTNNAC 2 cut(s) 91, 707
HpyAV CCTTC 9 cut(s) 71, 145, 808, 908, 994, 1144, 1178, 1182, 1245
HpyCH4III ACNGT 6 cut(s) 363, 410, 803, 908, 1062, 1162
HpyF10VI GCNNNNNNNGC 3 cut(s) 393, 545, 1372
HpyF3I CTNAG 3 cut(s) 463, 476, 1215
Hsp92I GRCGYC 1 cut(s) 58
HspAI GCGC 2 cut(s) 58, 205
KasI GGCGCC 1 cut(s) 57
Ksp22I TGATCA 3 cut(s) 175, 558, 1039
KspI CCGCGG 1 cut(s) 397
LguI GCTCTTC 1 cut(s) 308
LmnI GCTCC 1 cut(s) 371
Lsp1109I GCAGC 4 cut(s) 962, 1188, 1210, 1375
LweI GCATC 5 cut(s) 27, 823, 1097, 1130, 1201
MaeIII GTNAC 5 cut(s) 410, 449, 840, 1062, 1228
MboII GAAGA 5 cut(s) 295, 347, 632, 691, 1270
MhlI GDGCHC 1 cut(s) 303
MlsI TGGCCA 1 cut(s) 251
MluCI AATT 5 cut(s) 192, 846, 1106, 1166, 1292
MluNI TGGCCA 1 cut(s) 251
Mly113I GGCGCC 1 cut(s) 58
MlyI GAGTC 2 cut(s) 500, 712
MmeI TCCRAC 2 cut(s) 145, 382
Mox20I TGGCCA 1 cut(s) 251
Mph1103I ATGCAT 1 cut(s) 1145
MroXI GAANNNNTTC 1 cut(s) 1287
MscI TGGCCA 1 cut(s) 251
MseI TTAA 5 cut(s) 132, 810, 822, 1310, 1323
MslI CAYNNNNRTG 5 cut(s) 35, 222, 601, 668, 831
Msp20I TGGCCA 1 cut(s) 251
MspA1I CMGCKG 2 cut(s) 396, 1268
MspCI CTTAAG 1 cut(s) 1322
MspI CCGG 2 cut(s) 114, 1007
MspR9I CCNGG 2 cut(s) 434, 1008
Mva1269I GAATGC 2 cut(s) 766, 883
MvaI CCWGG 1 cut(s) 434
MvnI CGCG 1 cut(s) 396
MwoI GCNNNNNNNGC 3 cut(s) 393, 545, 1372
NarI GGCGCC 1 cut(s) 58
NciI CCSGG 1 cut(s) 1008
NcoI CCATGG 1 cut(s) 276
NlaIV GGNNCC 5 cut(s) 59, 218, 373, 583, 716
NmuCI GTSAC 3 cut(s) 410, 1062, 1228
NsiI ATGCAT 1 cut(s) 1145
NspI RCATGY 1 cut(s) 1147
NspV TTCGAA 2 cut(s) 1103, 1224
PaeI GCATGC 1 cut(s) 1147
PciSI GCTCTTC 1 cut(s) 308
PctI GAATGC 2 cut(s) 766, 883
PdmI GAANNNNTTC 1 cut(s) 1287
PfeI GAWTC 4 cut(s) 427, 748, 1068, 1134
PkrI GCNGC 5 cut(s) 395, 952, 1178, 1200, 1365
PleI GAGTC 2 cut(s) 499, 711
PluTI GGCGCC 1 cut(s) 61
PpsI GAGTC 2 cut(s) 499, 711
Psp124BI GAGCTC 1 cut(s) 303
Psp6I CCWGG 1 cut(s) 432
PspEI GGTNACC 1 cut(s) 449
PspFI CCCAGC 2 cut(s) 52, 1268
PspGI CCWGG 1 cut(s) 432
PspN4I GGNNCC 5 cut(s) 59, 218, 373, 583, 716
PspPI GGNCC 1 cut(s) 111
PvuII CAGCTG 1 cut(s) 1268
RsaI GTAC 3 cut(s) 47, 76, 674
RsaNI GTAC 3 cut(s) 46, 75, 673
RseI CAYNNNNRTG 5 cut(s) 35, 222, 601, 668, 831
SacI GAGCTC 1 cut(s) 303
SacII CCGCGG 1 cut(s) 397
SapI GCTCTTC 1 cut(s) 308
SaqAI TTAA 5 cut(s) 132, 810, 822, 1310, 1323
SatI GCNGC 5 cut(s) 394, 951, 1177, 1199, 1364
Sau96I GGNCC 1 cut(s) 111
SchI GAGTC 2 cut(s) 500, 712
ScrFI CCNGG 2 cut(s) 434, 1008
SduI GDGCHC 1 cut(s) 303
SfaNI GCATC 5 cut(s) 27, 823, 1097, 1130, 1201
SfoI GGCGCC 1 cut(s) 59
Sfr303I CCGCGG 1 cut(s) 397
SfuI TTCGAA 2 cut(s) 1103, 1224
SgrBI CCGCGG 1 cut(s) 397
SinI GGWCC 1 cut(s) 111
SmiMI CAYNNNNRTG 5 cut(s) 35, 222, 601, 668, 831
SmlI CTYRAG 5 cut(s) 106, 329, 455, 1322, 1383
SmoI CTYRAG 5 cut(s) 106, 329, 455, 1322, 1383
SphI GCATGC 1 cut(s) 1147
Sse9I AATT 5 cut(s) 192, 846, 1106, 1166, 1292
SsiI CCGC 5 cut(s) 394, 396, 528, 606, 935
SspDI GGCGCC 1 cut(s) 57
SstI GAGCTC 1 cut(s) 303
StyD4I CCNGG 2 cut(s) 432, 1006
StyI CCWWGG 3 cut(s) 84, 276, 585
TaaI ACNGT 6 cut(s) 363, 410, 803, 908, 1062, 1162
TaqI TCGA 4 cut(s) 100, 987, 1103, 1224
TaqII GACCGA 1 cut(s) 187
TasI AATT 5 cut(s) 192, 846, 1106, 1166, 1292
TatI WGTACW 1 cut(s) 672
TauI GCSGC 1 cut(s) 396
TfiI GAWTC 4 cut(s) 427, 748, 1068, 1134
Tru1I TTAA 5 cut(s) 132, 810, 822, 1310, 1323
Tru9I TTAA 5 cut(s) 132, 810, 822, 1310, 1323
TscAI CASTG 1 cut(s) 880
TseFI GTSAC 3 cut(s) 410, 1062, 1228
TseI GCWGC 4 cut(s) 950, 1176, 1198, 1363
Tsp45I GTSAC 3 cut(s) 410, 1062, 1228
TspDTI ATGAA 1 cut(s) 255
TspGWI ACGGA 1 cut(s) 760
TspRI CASTG 1 cut(s) 880
Vha464I CTTAAG 1 cut(s) 1322
VpaK11BI GGWCC 1 cut(s) 111
XapI RAATTY 2 cut(s) 192, 1106
XceI RCATGY 1 cut(s) 1147
XcmI CCANNNNNNNNNTGG 1 cut(s) 365
XmnI GAANNNNTTC 1 cut(s) 1287
Zsp2I ATGCAT 1 cut(s) 1145
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.