MD05G1298900.v1.1

CBL-interacting protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Reverse (-)
43234137 .. 43235528
1392 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1298900.v1.1.491

Sequence Viewer

Length: 1392 bp
ATGGAGGTGAAAAAAGGAAACATATTGATGCACAAGTACGAGGTGGGACGGTTGCTTGGAAAAGGGACATTTGCCAAGGTTTACCATGCACGGAACCTGAAGTCCGGCCAGAGCGTTGCAATTAAGATAATCGACAAGGAGAAGGTGCAGAAGGTCGGATTGATTGATCAGATCAAGAGGGAAATCTCCGTGATGCGCCTTGTGAGGCACCCGAATGTGGTTCAGCTCTTTGAGGTTATGGCCAGCAAGACCAAGATTTATTTTGCCATGGAGTACGTGAGAGGCGGGGAGCTTTTCAACAAGGTTGCCAAAGGGAAGCTTAAGGAAGATGTGGCAAGAAAATACTTTCAGCAACTGATTGGGGCTGTCGATTACTGCCACAGTCGAGGGGTCTATCACCGCGACATCAAGCCAGAGAATCTCTTGGTGGACGAGAATGGAAACCTCAAAGTTTCGGATTTTGGATTAAGCGCATTGTGGGAGTCTAGGGGACAAGATGGCCTCCTCCACACCACGTGTGGTACGCCAGCGTATGTAGCACCAGAGGTAATAAACAAGAAAGGTTATGATGGCGCAAAGGCGGATACATGGTCTTGTGGGGTTGTCCTCTTTGTTCTGCTGGCCGCCTTCCTGCCATTCCATGACACCAATCTCATGGAAATGTATAGGAAAATCAGCAGAGGAGACTTCAGGAGCCCTCAGTGGTTTCCCCCAGAGGTACGTAAGCTTCTTTCGAGGATTCTCGATCCTAATCCAAGCTCAAGAATAAGTGTTGACAAGATCATGGAGAATAGTTGGTTCAAGAAGGGGTTTAAACAAATCGAAGCATCTTTAGCCCCTCCGTGTGATCCAAACACCTCAATCCGTGATGTCCATGAGGCTTTTGCATCAACAAATCATTCAGCTGAAGAAAGTTCCAACAAGAATTCTAGCGGAGCAGGAACAAGCCCCATGAGGCCAACATGTTTCAATGCGTTCGACATCATATCTCTCTCGCCAGGTTTTGACCTATCCGGTTTGTTTGAGAATGATATGAATCACAGACCGCAGGAGCGATTCATGAGCACACAACCAGCCGCGACAATTGTTTCAAAATTTGAAGCCATAGCACAGACGGAGAGGTTCAAATGCCTGAAAAAAGACGGAACCCTTAAACTACAGGGTAGCAAGGAAGGAAGGAAAGGGCAGCTAGGCATCGATGCTGAGATTTTCGAGGTCACACCTTCATTTTATGTCGTGGAGATGAAGAAAACGGCTGGGGACACATTGGAATACATGGAGTTCTGTGACAATGGCTTGAAGCCCTCTCTTAAGGATATAGTATGGACTTGGCAAGGAACCGAGCAGCAACAGCAACCGCCGCTAGTAGTAGCACCTGAAGTCGTTTCTTAG

Protein Analysis

464

Amino Acids

52.02

Weight (kDa)

8.9

Isoelectric Point (pI)

33.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 13 - 267 1.7e-75 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 15 - 263 7.5e-40 Protein tyrosine and serine/threonine kinase
Kinase-like PF14531 103 - 255 6.5e-10 Kinase-like
NAF PF03822 320 - 377 1.8e-20 NAF domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015822)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G45820
fragaria_vesca FvH4_3g07630
malus_domestica MD05G1298900.v1.1 MD10G1278400.v1.1
prunus_persica Prupe.4G062900_v2.0.a1
rosa_chinensis RchiOBHm_Chr5g0011061
rosa_laevigata RLG00000031806
rosa_multiflora Rmu_sc0003242.1_g000007
rosa_roxburghii Rroxscaffold_1G00065350
rosa_rugosa Rorug04G0454900
rosa_samantha Rh5AG087000 Rh5BG081900 Rh5CG094700
rosa_wichuraiana Rw0G000150 Rw0G017800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 207
AccII CGCG 2 cut(s) 402, 1079
AciI CCGC 9 cut(s) 285, 400, 581, 624, 933, 1046, 1077, 1358, 1361
AclWI GGATC 2 cut(s) 740, 842
AcoI YGGCCR 3 cut(s) 106, 240, 621
AcsI RAATTY 2 cut(s) 925, 1094
AcuI CTGAAG 3 cut(s) 119, 673, 927
AcvI CACGTG 1 cut(s) 516
AdeI CACNNNGTG 1 cut(s) 516
AfaI GTAC 4 cut(s) 38, 275, 523, 720
AfiI CCNNNNNNNGG 1 cut(s) 217
AflII CTTAAG 2 cut(s) 320, 1310
AflIII ACRYGT 2 cut(s) 515, 962
AgsI TTSAA 7 cut(s) 298, 802, 970, 1092, 1100, 1126, 1300
AjnI CCWGG 1 cut(s) 997
AloI GAACNNNNNNTCC 2 cut(s) 86, 118
AluBI AGCT 7 cut(s) 226, 292, 319, 727, 759, 905, 1189
AluI AGCT 7 cut(s) 226, 292, 319, 727, 759, 905, 1189
Alw21I GWGCWC 1 cut(s) 1067
Alw26I GTCTC 1 cut(s) 678
AlwI GGATC 2 cut(s) 740, 842
AlwNI CAGNNNCTG 1 cut(s) 355
AoxI GGCC 5 cut(s) 106, 240, 499, 621, 956
ApeKI GCWGC 2 cut(s) 1186, 1345
ApoI RAATTY 2 cut(s) 925, 1094
AspLEI GCGC 3 cut(s) 198, 473, 575
AsuHPI GGTGA 2 cut(s) 19, 389
BalI TGGCCA 1 cut(s) 242
BanI GGYRCC 1 cut(s) 207
BanII GRGCYC 1 cut(s) 698
BarI GAAGNNNNNNTAC 2 cut(s) 711, 743
BbrPI CACGTG 1 cut(s) 516
Bbv12I GWGCWC 1 cut(s) 1067
BbvI GCAGC 2 cut(s) 1198, 1357
BccI CCATC 2 cut(s) 491, 563
BceAI ACGGC 1 cut(s) 1269
BciT130I CCWGG 1 cut(s) 999
BciVI GTATCC 1 cut(s) 577
BclI TGATCA 1 cut(s) 166
BcoDI GTCTC 1 cut(s) 678
BfaI CTAG 4 cut(s) 486, 930, 1190, 1364
BfmI CTRYAG 1 cut(s) 1157
BfrI CTTAAG 2 cut(s) 320, 1310
BfuI GTATCC 1 cut(s) 577
BisI GCNGC 5 cut(s) 624, 1077, 1187, 1346, 1361
BlsI GCNGC 5 cut(s) 625, 1078, 1188, 1347, 1362
Bme1390I CCNGG 1 cut(s) 999
BmiI GGNNCC 5 cut(s) 95, 209, 695, 1147, 1339
BmrFI CCNGG 1 cut(s) 999
BmsI GCATC 6 cut(s) 18, 183, 836, 896, 1189, 1203
BpuEI CTTGAG 1 cut(s) 745
Bsa29I ATCGAT 1 cut(s) 1197
BsaAI YACGTR 3 cut(s) 277, 516, 722
BsaBI GATNNNNATC 2 cut(s) 750, 1035
BsaJI CCNNGG 2 cut(s) 75, 267
BsaWI WCCGGW 1 cut(s) 1013
Bsc4I CCNNNNNNNGG 1 cut(s) 217
Bse8I GATNNNNATC 2 cut(s) 750, 1035
BseBI CCWGG 1 cut(s) 999
BseCI ATCGAT 1 cut(s) 1197
BseDI CCNNGG 2 cut(s) 75, 267
BseJI GATNNNNATC 2 cut(s) 750, 1035
BseLI CCNNNNNNNGG 1 cut(s) 217
BseMII CTCAG 2 cut(s) 713, 1194
BseRI GAGGAG 2 cut(s) 494, 696
BseXI GCAGC 2 cut(s) 1198, 1357
BseYI CCCAGC 1 cut(s) 1256
BsgI GTGCAG 1 cut(s) 167
Bsh1236I CGCG 2 cut(s) 402, 1079
BshFI GGCC 5 cut(s) 108, 242, 501, 623, 958
BshNI GGYRCC 1 cut(s) 207
BshVI ATCGAT 1 cut(s) 1197
BsiHKAI GWGCWC 1 cut(s) 1067
BsiSI CCGG 2 cut(s) 105, 1014
BslFI GGGAC 4 cut(s) 60, 79, 504, 1274
BslI CCNNNNNNNGG 1 cut(s) 217
BsmAI GTCTC 1 cut(s) 678
BsmFI GGGAC 4 cut(s) 60, 79, 504, 1274
BsnI GGCC 5 cut(s) 108, 242, 501, 623, 958
Bsp1286I GDGCHC 2 cut(s) 698, 1067
Bsp143I GATC 5 cut(s) 166, 171, 745, 780, 847
Bsp19I CCATGG 1 cut(s) 267
BspACI CCGC 9 cut(s) 285, 400, 581, 624, 933, 1046, 1077, 1358, 1361
BspANI GGCC 5 cut(s) 108, 242, 501, 623, 958
BspCNI CTCAG 2 cut(s) 712, 1195
BspDI ATCGAT 1 cut(s) 1197
BspFNI CGCG 2 cut(s) 402, 1079
BspHI TCATGA 1 cut(s) 1059
BspLI GGNNCC 5 cut(s) 95, 209, 695, 1147, 1339
BspPI GGATC 2 cut(s) 740, 842
BspT107I GGYRCC 1 cut(s) 207
BspTI CTTAAG 2 cut(s) 320, 1310
BssECI CCNNGG 2 cut(s) 75, 267
BssMI GATC 5 cut(s) 166, 171, 745, 780, 847
BssT1I CCWWGG 2 cut(s) 75, 267
Bst2UI CCWGG 1 cut(s) 999
Bst4CI ACNGT 2 cut(s) 51, 383
BstAFI CTTAAG 2 cut(s) 320, 1310
BstBAI YACGTR 3 cut(s) 277, 516, 722
BstC8I GCNNGC 3 cut(s) 244, 528, 621
BstDEI CTNAG 3 cut(s) 699, 1203, 1389
BstDSI CCRYGG 1 cut(s) 267
BstFNI CGCG 2 cut(s) 402, 1079
BstHHI GCGC 3 cut(s) 198, 473, 575
BstKTI GATC 5 cut(s) 169, 174, 748, 783, 850
BstMAI GTCTC 1 cut(s) 678
BstMBI GATC 5 cut(s) 166, 171, 745, 780, 847
BstMWI GCNNNNNNNGC 4 cut(s) 536, 833, 1351, 1360
BstNI CCWGG 1 cut(s) 999
BstNSI RCATGY 1 cut(s) 966
BstSCI CCNGG 1 cut(s) 997
BstSFI CTRYAG 1 cut(s) 1157
BstSNI TACGTA 1 cut(s) 722
BstUI CGCG 2 cut(s) 402, 1079
BstV1I GCAGC 2 cut(s) 1198, 1357
BstXI CCANNNNNNTGG 1 cut(s) 655
Bsu15I ATCGAT 1 cut(s) 1197
BsuI GTATCC 1 cut(s) 577
BsuRI GGCC 5 cut(s) 108, 242, 501, 623, 958
BsuTUI ATCGAT 1 cut(s) 1197
BtgI CCRYGG 1 cut(s) 267
BtsIMutI CAGTG 1 cut(s) 707
Cac8I GCNNGC 3 cut(s) 244, 528, 621
CaiI CAGNNNCTG 1 cut(s) 355
CciI TCATGA 1 cut(s) 1059
CfoI GCGC 3 cut(s) 198, 473, 575
ClaI ATCGAT 1 cut(s) 1197
Csp6I GTAC 4 cut(s) 37, 274, 522, 719
CviQI GTAC 4 cut(s) 37, 274, 522, 719
DdeI CTNAG 3 cut(s) 699, 1203, 1389
DpnI GATC 5 cut(s) 168, 173, 747, 782, 849
DpnII GATC 5 cut(s) 166, 171, 745, 780, 847
DraI TTTAAA 1 cut(s) 814
DraIII CACNNNGTG 1 cut(s) 516
EaeI YGGCCR 3 cut(s) 106, 240, 621
EciI GGCGGA 1 cut(s) 596
Eco105I TACGTA 1 cut(s) 722
Eco130I CCWWGG 2 cut(s) 75, 267
Eco24I GRGCYC 1 cut(s) 698
Eco57I CTGAAG 3 cut(s) 119, 673, 927
Eco72I CACGTG 1 cut(s) 516
EcoRI GAATTC 1 cut(s) 925
EcoRII CCWGG 1 cut(s) 997
EcoT14I CCWWGG 2 cut(s) 75, 267
EcoT38I GRGCYC 1 cut(s) 698
ErhI CCWWGG 2 cut(s) 75, 267
FalI AAGNNNNNCTT 2 cut(s) 303, 335
FaqI GGGAC 4 cut(s) 60, 79, 504, 1274
FauI CCCGC 1 cut(s) 278
FbaI TGATCA 1 cut(s) 166
Fnu4HI GCNGC 5 cut(s) 624, 1077, 1187, 1346, 1361
FriOI GRGCYC 1 cut(s) 698
Fsp4HI GCNGC 5 cut(s) 624, 1077, 1187, 1346, 1361
FspBI CTAG 4 cut(s) 486, 930, 1190, 1364
GlaI GCGC 3 cut(s) 197, 472, 574
GluI GCNGC 5 cut(s) 624, 1077, 1187, 1346, 1361
GsaI CCCAGC 1 cut(s) 1260
HaeIII GGCC 5 cut(s) 108, 242, 501, 623, 958
HapII CCGG 2 cut(s) 105, 1014
HhaI GCGC 3 cut(s) 198, 473, 575
Hin6I GCGC 3 cut(s) 196, 471, 573
HinP1I GCGC 3 cut(s) 196, 471, 573
HincII GTYRAC 1 cut(s) 775
HindII GTYRAC 1 cut(s) 775
HindIII AAGCTT 2 cut(s) 317, 725
HinfI GANTC 5 cut(s) 418, 482, 739, 1036, 1056
HpaII CCGG 2 cut(s) 105, 1014
HphI GGTGA 2 cut(s) 19, 389
Hpy166II GTNNAC 3 cut(s) 82, 430, 775
Hpy188I TCNGA 3 cut(s) 158, 171, 457
Hpy188III TCNNGA 6 cut(s) 175, 691, 743, 762, 802, 1060
Hpy8I GTNNAC 3 cut(s) 82, 430, 775
HpyAV CCTTC 7 cut(s) 136, 145, 637, 799, 1166, 1170, 1233
HpyCH4III ACNGT 2 cut(s) 51, 383
HpyCH4IV ACGT 3 cut(s) 276, 515, 721
HpyCH4V TGCA 5 cut(s) 31, 89, 119, 148, 887
HpyF10VI GCNNNNNNNGC 4 cut(s) 536, 833, 1351, 1360
HpyF3I CTNAG 3 cut(s) 699, 1203, 1389
HpySE526I ACGT 3 cut(s) 276, 515, 721
HspAI GCGC 3 cut(s) 196, 471, 573
Ksp22I TGATCA 1 cut(s) 166
Kzo9I GATC 5 cut(s) 166, 171, 745, 780, 847
LmnI GCTCC 4 cut(s) 289, 693, 935, 1051
Lsp1109I GCAGC 2 cut(s) 1198, 1357
LweI GCATC 6 cut(s) 18, 183, 836, 896, 1189, 1203
MaeI CTAG 4 cut(s) 486, 930, 1190, 1364
MaeII ACGT 3 cut(s) 276, 515, 721
MaeIII GTNAC 2 cut(s) 1216, 1286
MalI GATC 5 cut(s) 168, 173, 747, 782, 849
MboI GATC 5 cut(s) 166, 171, 745, 780, 847
MboII GAAGA 3 cut(s) 338, 920, 1258
MfeI CAATTG 1 cut(s) 1083
MhlI GDGCHC 2 cut(s) 698, 1067
MlsI TGGCCA 1 cut(s) 242
MluCI AATT 4 cut(s) 120, 925, 1083, 1094
MluNI TGGCCA 1 cut(s) 242
MlyI GAGTC 1 cut(s) 491
MmeI TCCRAC 2 cut(s) 136, 942
Mox20I TGGCCA 1 cut(s) 242
MscI TGGCCA 1 cut(s) 242
MseI TTAA 6 cut(s) 123, 321, 467, 813, 1152, 1311
MslI CAYNNNNRTG 3 cut(s) 26, 213, 659
Msp20I TGGCCA 1 cut(s) 242
MspA1I CMGCKG 1 cut(s) 905
MspCI CTTAAG 2 cut(s) 320, 1310
MspI CCGG 2 cut(s) 105, 1014
MspR9I CCNGG 1 cut(s) 999
MssI GTTTAAAC 1 cut(s) 814
MunI CAATTG 1 cut(s) 1083
MvaI CCWGG 1 cut(s) 999
MvnI CGCG 2 cut(s) 402, 1079
MwoI GCNNNNNNNGC 4 cut(s) 536, 833, 1351, 1360
NcoI CCATGG 1 cut(s) 267
NdeII GATC 5 cut(s) 166, 171, 745, 780, 847
NlaIV GGNNCC 5 cut(s) 95, 209, 695, 1147, 1339
NmuCI GTSAC 2 cut(s) 1216, 1286
NspI RCATGY 1 cut(s) 966
PagI TCATGA 1 cut(s) 1059
PciI ACATGT 1 cut(s) 962
PfeI GAWTC 4 cut(s) 418, 739, 1036, 1056
PkrI GCNGC 5 cut(s) 625, 1078, 1188, 1347, 1362
PleI GAGTC 1 cut(s) 490
PmaCI CACGTG 1 cut(s) 516
PmeI GTTTAAAC 1 cut(s) 814
PmlI CACGTG 1 cut(s) 516
PpsI GAGTC 1 cut(s) 490
Ppu21I YACGTR 3 cut(s) 277, 516, 722
PscI ACATGT 1 cut(s) 962
Psp6I CCWGG 1 cut(s) 997
PspCI CACGTG 1 cut(s) 516
PspFI CCCAGC 1 cut(s) 1256
PspGI CCWGG 1 cut(s) 997
PspN4I GGNNCC 5 cut(s) 95, 209, 695, 1147, 1339
PstNI CAGNNNCTG 1 cut(s) 355
PvuII CAGCTG 1 cut(s) 905
RsaI GTAC 4 cut(s) 38, 275, 523, 720
RsaNI GTAC 4 cut(s) 37, 274, 522, 719
RseI CAYNNNNRTG 3 cut(s) 26, 213, 659
SaqAI TTAA 6 cut(s) 123, 321, 467, 813, 1152, 1311
SatI GCNGC 5 cut(s) 624, 1077, 1187, 1346, 1361
Sau3AI GATC 5 cut(s) 166, 171, 745, 780, 847
SchI GAGTC 1 cut(s) 491
ScrFI CCNGG 1 cut(s) 999
SduI GDGCHC 2 cut(s) 698, 1067
SfaNI GCATC 6 cut(s) 18, 183, 836, 896, 1189, 1203
SfcI CTRYAG 1 cut(s) 1157
SmiMI CAYNNNNRTG 3 cut(s) 26, 213, 659
SmlI CTYRAG 3 cut(s) 320, 760, 1310
SmoI CTYRAG 3 cut(s) 320, 760, 1310
SnaBI TACGTA 1 cut(s) 722
Sse9I AATT 4 cut(s) 120, 925, 1083, 1094
SsiI CCGC 9 cut(s) 285, 400, 581, 624, 933, 1046, 1077, 1358, 1361
SspMI CTAG 4 cut(s) 486, 930, 1190, 1364
StyD4I CCNGG 1 cut(s) 997
StyI CCWWGG 2 cut(s) 75, 267
TaaI ACNGT 2 cut(s) 51, 383
TaiI ACGT 3 cut(s) 279, 518, 724
TaqI TCGA 9 cut(s) 132, 369, 385, 734, 744, 822, 978, 1197, 1212
TasI AATT 4 cut(s) 120, 925, 1083, 1094
TauI GCSGC 3 cut(s) 626, 1079, 1363
TfiI GAWTC 4 cut(s) 418, 739, 1036, 1056
Tru1I TTAA 6 cut(s) 123, 321, 467, 813, 1152, 1311
Tru9I TTAA 6 cut(s) 123, 321, 467, 813, 1152, 1311
TscAI CASTG 1 cut(s) 707
TseFI GTSAC 2 cut(s) 1216, 1286
TseI GCWGC 2 cut(s) 1186, 1345
Tsp45I GTSAC 2 cut(s) 1216, 1286
TspDTI ATGAA 4 cut(s) 1048, 1049, 1215, 1259
TspGWI ACGGA 6 cut(s) 106, 178, 831, 854, 1130, 1158
TspRI CASTG 1 cut(s) 707
Vha464I CTTAAG 2 cut(s) 320, 1310
XapI RAATTY 2 cut(s) 925, 1094
XceI RCATGY 1 cut(s) 966
XcmI CCANNNNNNNNNTGG 1 cut(s) 515
XspI CTAG 4 cut(s) 486, 930, 1190, 1364
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.