Rw0G017800

CBL-interacting protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00792
Physical Location & Seq
Reverse (-)
39882 .. 41273
1392 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G017800.1

Sequence Viewer

Length: 1392 bp
ATGGAGAACAAGAAAGGAAACATATTGATGCAGAAGTACGAGCTGGGGCGCCTTCTCGGGAAAGGTACATTTGCAAAGGTTTACCATGCTCGAAACATGAAGACCGGCCAAAGTGTTGCCATTAAGATCATAGACAAGGAGAAGGTGCAACAAGTGGGATTGATTGATCAAATCAAGCGTGAAATCTCTGTGATGCGCCTTGTTAGGCACCCCAATGTTGTTCAGCTCTATGAAGTGATGGCCAGCAAGACCAAAATCTACTTTGCCATGGAGTATGTGAGAGGTGGTGAGCTCTTCAACAAGGTTGCCAGGGGAAAGCTCAAGGAAGACATGGCTAGAAAATACTTTCAACAGTTGATTGGCGCAGTTGATTACTGCCACAGCCGCGGAGTTTATCACCGTGATATCAAGCCAGAGAATCTCCTGGTTGATGAGCATGGTAACCTCAAGGTTTCAGATTTCGGGCTGAGTGCATTGTGGGAGTCGAGAGGTCAAGATGGTCTGCTGCACACAACTTGTGGAACTCCTGCTTATGTAGCACCAGAAGTGATCAACAAGAAAGGTTATGATGGTGCCAAGGCTGATATATGGTCATGTGGGGTTGTCCTTTACGTTCTTTTGGCTGGTTTTCTTCCATTCCATGACACAAATCTCATGGAAATGTACAGGAAGATCAGCAGAGGAGACTTCAAGAGTCCGCAATGGTTCCCTCCAGAGGTTCGTAAGCTTCTTGCACGGATTCTTGATCCAAATGCCACCGCGAGAATAAGTGTGGACAAGATCATGGAGAACAGTTGGTTCAAGAAGGGGTTTAAGCACATTGATGCCCCATTACCGATTCCAGGTGATCCAAACACATCTATCACTGATGTGCATTCTGCTTTTGGATCACCAGACAGTTCTGAAAGCAGTTCTAATAGGAAACCAGCAATTACTACTGCAGCAGCAAGCCCCATGAAGCCAACTAACTTCAATGCCTTTGACATCATATCTCTCTCACCCGGATTTGATCTATCCGGTTTGTTTGAGGGTGATATAAAGCAAAGATCATCACAGTCACGATTCACCACTACAAAACCAGCCTCTACTATTGTTTCAAAATTTGAAGAGATAGCGCAGATGGAGAGATTCAGATGCATGAAGCAGGACGGAACTGTCAAGTTGCAGGGCAGCAGGGAAGGAAGAAAAGGGCAGCTTGGTATTGATGCTGAGATTTTCGAGGTCACGCCTTCGTTTTTTGTTGTGGAGGTGAAGAAAACAGCTGGGGACACATTGGAATACATGCAATTCTATGACGAAGATTTAAAGCCCTCTCTTAAAGACATAGTATGGACTTGGCAAGGAAATGATCCACAGCAACAACATCAGCCAGCAACCCAAGTTATTTCTTAG

Protein Analysis

463

Amino Acids

52.13

Weight (kDa)

9.08

Isoelectric Point (pI)

32.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 13 - 267 1.8e-76 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 14 - 263 2e-41 Protein tyrosine and serine/threonine kinase
Kinase-like PF14531 104 - 255 1.9e-09 Kinase-like
NAF PF03822 321 - 381 6.8e-21 NAF domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015822)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G45820
fragaria_vesca FvH4_3g07630
malus_domestica MD05G1298900.v1.1 MD10G1278400.v1.1
prunus_persica Prupe.4G062900_v2.0.a1
rosa_chinensis RchiOBHm_Chr5g0011061
rosa_laevigata RLG00000031806
rosa_multiflora Rmu_sc0003242.1_g000007
rosa_roxburghii Rroxscaffold_1G00065350
rosa_rugosa Rorug04G0454900
rosa_samantha Rh5AG087000 Rh5BG081900 Rh5CG094700
rosa_wichuraiana Rw0G000150 Rw0G017800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1154
AccB1I GGYRCC 3 cut(s) 48, 207, 572
AccII CGCG 2 cut(s) 387, 761
AciI CCGC 4 cut(s) 385, 387, 698, 759
AclWI GGATC 4 cut(s) 740, 842, 895, 1343
AcoI YGGCCR 2 cut(s) 106, 240
AcsI RAATTY 1 cut(s) 1100
AcyI GRCGYC 1 cut(s) 49
AfaI GTAC 3 cut(s) 38, 67, 665
AfiI CCNNNNNNNGG 2 cut(s) 715, 842
AgsI TTSAA 7 cut(s) 298, 350, 691, 802, 973, 1098, 1106
AjnI CCWGG 3 cut(s) 308, 423, 841
AleI CACNNNNGTG 1 cut(s) 869
AluBI AGCT 7 cut(s) 43, 226, 292, 319, 727, 1195, 1262
AluI AGCT 7 cut(s) 43, 226, 292, 319, 727, 1195, 1262
Alw21I GWGCWC 1 cut(s) 294
Alw26I GTCTC 1 cut(s) 678
AlwI GGATC 4 cut(s) 740, 842, 895, 1343
Ama87I CYCGRG 1 cut(s) 56
AoxI GGCC 2 cut(s) 106, 240
ApeKI GCWGC 5 cut(s) 505, 941, 944, 1170, 1192
ApoI RAATTY 1 cut(s) 1100
AspLEI GCGC 4 cut(s) 51, 198, 365, 1117
AsuC2I CCSGG 1 cut(s) 1002
AsuHPI GGTGA 8 cut(s) 299, 389, 857, 882, 990, 1043, 1057, 1261
AvaI CYCGRG 1 cut(s) 56
BalI TGGCCA 1 cut(s) 242
BanI GGYRCC 3 cut(s) 48, 207, 572
BanII GRGCYC 1 cut(s) 294
BbsI GAAGAC 2 cut(s) 107, 333
Bbv12I GWGCWC 1 cut(s) 294
BbvI GCAGC 5 cut(s) 492, 953, 956, 1182, 1204
BccI CCATC 4 cut(s) 232, 491, 563, 1114
BciT130I CCWGG 3 cut(s) 310, 425, 843
BclI TGATCA 2 cut(s) 166, 549
BcnI CCSGG 1 cut(s) 1002
BcoDI GTCTC 1 cut(s) 678
BfaI CTAG 1 cut(s) 336
BfmI CTRYAG 1 cut(s) 939
BfoI RGCGCY 1 cut(s) 52
BisI GCNGC 6 cut(s) 385, 506, 942, 945, 1171, 1193
BlsI GCNGC 6 cut(s) 386, 507, 943, 946, 1172, 1194
Bme1390I CCNGG 4 cut(s) 310, 425, 843, 1002
BmeT110I CYCGRG 1 cut(s) 56
BmiI GGNNCC 4 cut(s) 50, 209, 574, 707
BmrFI CCNGG 4 cut(s) 310, 425, 843, 1002
BmsI GCATC 5 cut(s) 18, 183, 814, 1124, 1195
BpiI GAAGAC 2 cut(s) 107, 333
BpmI CTGGAG 1 cut(s) 696
BpuEI CTTGAG 2 cut(s) 305, 431
BpuMI CCSGG 1 cut(s) 1002
BsaHI GRCGYC 1 cut(s) 49
BsaJI CCNNGG 4 cut(s) 267, 309, 385, 576
BsaWI WCCGGW 1 cut(s) 1016
Bsc4I CCNNNNNNNGG 2 cut(s) 715, 842
Bse118I RCCGGY 1 cut(s) 104
Bse3DI GCAATG 1 cut(s) 707
BseBI CCWGG 3 cut(s) 310, 425, 843
BseDI CCNNGG 4 cut(s) 267, 309, 385, 576
BseLI CCNNNNNNNGG 2 cut(s) 715, 842
BseMI GCAATG 1 cut(s) 707
BseMII CTCAG 2 cut(s) 458, 1200
BseRI GAGGAG 1 cut(s) 696
BseXI GCAGC 5 cut(s) 492, 953, 956, 1182, 1204
BseYI CCCAGC 2 cut(s) 43, 1262
BsgI GTGCAG 1 cut(s) 491
Bsh1236I CGCG 2 cut(s) 387, 761
BshFI GGCC 2 cut(s) 108, 242
BshNI GGYRCC 3 cut(s) 48, 207, 572
BsiHKAI GWGCWC 1 cut(s) 294
BsiHKCI CYCGRG 1 cut(s) 56
BsiSI CCGG 3 cut(s) 105, 1002, 1017
BslFI GGGAC 1 cut(s) 1280
BslI CCNNNNNNNGG 2 cut(s) 715, 842
BsmAI GTCTC 1 cut(s) 678
BsmFI GGGAC 1 cut(s) 1280
BsmI GAATGC 1 cut(s) 874
BsnI GGCC 2 cut(s) 108, 242
BsoBI CYCGRG 1 cut(s) 56
Bsp1286I GDGCHC 1 cut(s) 294
Bsp1407I TGTACA 1 cut(s) 663
Bsp19I CCATGG 1 cut(s) 267
BspACI CCGC 4 cut(s) 385, 387, 698, 759
BspANI GGCC 2 cut(s) 108, 242
BspCNI CTCAG 2 cut(s) 459, 1201
BspFNI CGCG 2 cut(s) 387, 761
BspLI GGNNCC 4 cut(s) 50, 209, 574, 707
BspMAI CTGCAG 1 cut(s) 943
BspPI GGATC 4 cut(s) 740, 842, 895, 1343
BspQI GCTCTTC 1 cut(s) 299
BspT107I GGYRCC 3 cut(s) 48, 207, 572
BsrDI GCAATG 1 cut(s) 707
BsrFI RCCGGY 1 cut(s) 104
BsrGI TGTACA 1 cut(s) 663
BssAI RCCGGY 1 cut(s) 104
BssECI CCNNGG 4 cut(s) 267, 309, 385, 576
BssNI GRCGYC 1 cut(s) 49
BssT1I CCWWGG 2 cut(s) 267, 576
Bst2UI CCWGG 3 cut(s) 310, 425, 843
Bst4CI ACNGT 6 cut(s) 354, 401, 794, 899, 1056, 1156
Bst6I CTCTTC 2 cut(s) 299, 1101
BstACI GRCGYC 1 cut(s) 49
BstAUI TGTACA 1 cut(s) 663
BstC8I GCNNGC 3 cut(s) 244, 949, 1371
BstDEI CTNAG 3 cut(s) 467, 1209, 1389
BstDSI CCRYGG 2 cut(s) 267, 385
BstEII GGTNACC 1 cut(s) 440
BstFNI CGCG 2 cut(s) 387, 761
BstH2I RGCGCY 1 cut(s) 52
BstHHI GCGC 4 cut(s) 51, 198, 365, 1117
BstMAI GTCTC 1 cut(s) 678
BstMWI GCNNNNNNNGC 2 cut(s) 384, 536
BstNI CCWGG 3 cut(s) 310, 425, 843
BstNSI RCATGY 1 cut(s) 1285
BstPI GGTNACC 1 cut(s) 440
BstSCI CCNGG 4 cut(s) 308, 423, 841, 1000
BstSFI CTRYAG 1 cut(s) 939
BstUI CGCG 2 cut(s) 387, 761
BstV1I GCAGC 5 cut(s) 492, 953, 956, 1182, 1204
BstV2I GAAGAC 2 cut(s) 107, 333
BsuRI GGCC 2 cut(s) 108, 242
BtgI CCRYGG 2 cut(s) 267, 385
BtsIMutI CAGTG 1 cut(s) 864
Cac8I GCNNGC 3 cut(s) 244, 949, 1371
CfoI GCGC 4 cut(s) 51, 198, 365, 1117
Cfr10I RCCGGY 1 cut(s) 104
Cfr42I CCGCGG 1 cut(s) 388
Csp6I GTAC 3 cut(s) 37, 66, 664
CviQI GTAC 3 cut(s) 37, 66, 664
DdeI CTNAG 3 cut(s) 467, 1209, 1389
DinI GGCGCC 1 cut(s) 50
DraI TTTAAA 1 cut(s) 1305
DrdI GACNNNNNNGTC 1 cut(s) 1154
DseDI GACNNNNNNGTC 1 cut(s) 1154
EaeI YGGCCR 2 cut(s) 106, 240
Eam1104I CTCTTC 2 cut(s) 299, 1101
EarI CTCTTC 2 cut(s) 299, 1101
Ecl136II GAGCTC 1 cut(s) 292
Eco130I CCWWGG 2 cut(s) 267, 576
Eco24I GRGCYC 1 cut(s) 294
Eco32I GATATC 1 cut(s) 406
Eco53kI GAGCTC 1 cut(s) 292
Eco88I CYCGRG 1 cut(s) 56
Eco91I GGTNACC 1 cut(s) 440
EcoICRI GAGCTC 1 cut(s) 292
EcoO65I GGTNACC 1 cut(s) 440
EcoRII CCWGG 3 cut(s) 308, 423, 841
EcoRV GATATC 1 cut(s) 406
EcoT14I CCWWGG 2 cut(s) 267, 576
EcoT22I ATGCAT 1 cut(s) 1139
EcoT38I GRGCYC 1 cut(s) 294
EgeI GGCGCC 1 cut(s) 50
EheI GGCGCC 1 cut(s) 50
ErhI CCWWGG 2 cut(s) 267, 576
FalI AAGNNNNNCTT 2 cut(s) 1179, 1211
FaqI GGGAC 1 cut(s) 1280
FbaI TGATCA 2 cut(s) 166, 549
Fnu4HI GCNGC 6 cut(s) 385, 506, 942, 945, 1171, 1193
FriOI GRGCYC 1 cut(s) 294
Fsp4HI GCNGC 6 cut(s) 385, 506, 942, 945, 1171, 1193
FspBI CTAG 1 cut(s) 336
GlaI GCGC 4 cut(s) 50, 197, 364, 1116
GluI GCNGC 6 cut(s) 385, 506, 942, 945, 1171, 1193
GsaI CCCAGC 2 cut(s) 47, 1266
GsuI CTGGAG 1 cut(s) 696
HaeII RGCGCY 1 cut(s) 52
HaeIII GGCC 2 cut(s) 108, 242
HapII CCGG 3 cut(s) 105, 1002, 1017
HhaI GCGC 4 cut(s) 51, 198, 365, 1117
Hin1I GRCGYC 1 cut(s) 49
Hin6I GCGC 4 cut(s) 49, 196, 363, 1115
HinP1I GCGC 4 cut(s) 49, 196, 363, 1115
HindIII AAGCTT 1 cut(s) 725
HinfI GANTC 7 cut(s) 418, 482, 694, 739, 838, 1062, 1128
HpaII CCGG 3 cut(s) 105, 1002, 1017
HphI GGTGA 8 cut(s) 299, 389, 857, 882, 990, 1043, 1057, 1261
Hpy166II GTNNAC 2 cut(s) 82, 775
Hpy188I TCNGA 3 cut(s) 457, 904, 1133
Hpy188III TCNNGA 8 cut(s) 58, 486, 494, 691, 713, 743, 802, 1059
Hpy8I GTNNAC 2 cut(s) 82, 775
HpyAV CCTTC 5 cut(s) 62, 136, 799, 1172, 1239
HpyCH4III ACNGT 6 cut(s) 354, 401, 794, 899, 1056, 1156
HpyCH4IV ACGT 1 cut(s) 612
HpyF10VI GCNNNNNNNGC 2 cut(s) 384, 536
HpyF3I CTNAG 3 cut(s) 467, 1209, 1389
HpySE526I ACGT 1 cut(s) 612
Hsp92I GRCGYC 1 cut(s) 49
HspAI GCGC 4 cut(s) 49, 196, 363, 1115
KasI GGCGCC 1 cut(s) 48
Ksp22I TGATCA 2 cut(s) 166, 549
KspI CCGCGG 1 cut(s) 388
LguI GCTCTTC 1 cut(s) 299
Lsp1109I GCAGC 5 cut(s) 492, 953, 956, 1182, 1204
LweI GCATC 5 cut(s) 18, 183, 814, 1124, 1195
MaeI CTAG 1 cut(s) 336
MaeII ACGT 1 cut(s) 612
MaeIII GTNAC 3 cut(s) 440, 1056, 1222
MboII GAAGA 9 cut(s) 112, 286, 338, 623, 682, 1118, 1194, 1264, 1310
MhlI GDGCHC 1 cut(s) 294
MlsI TGGCCA 1 cut(s) 242
MluCI AATT 3 cut(s) 930, 1100, 1286
MluNI TGGCCA 1 cut(s) 242
Mly113I GGCGCC 1 cut(s) 49
MlyI GAGTC 2 cut(s) 491, 703
Mox20I TGGCCA 1 cut(s) 242
Mph1103I ATGCAT 1 cut(s) 1139
MscI TGGCCA 1 cut(s) 242
MseI TTAA 4 cut(s) 123, 813, 1304, 1317
MslI CAYNNNNRTG 5 cut(s) 26, 213, 659, 822, 869
Msp20I TGGCCA 1 cut(s) 242
MspA1I CMGCKG 2 cut(s) 387, 1262
MspI CCGG 3 cut(s) 105, 1002, 1017
MspR9I CCNGG 4 cut(s) 310, 425, 843, 1002
Mva1269I GAATGC 1 cut(s) 874
MvaI CCWGG 3 cut(s) 310, 425, 843
MvnI CGCG 2 cut(s) 387, 761
MwoI GCNNNNNNNGC 2 cut(s) 384, 536
NarI GGCGCC 1 cut(s) 49
NciI CCSGG 1 cut(s) 1002
NcoI CCATGG 1 cut(s) 267
NlaIV GGNNCC 4 cut(s) 50, 209, 574, 707
NmuCI GTSAC 2 cut(s) 1056, 1222
NsiI ATGCAT 1 cut(s) 1139
NspI RCATGY 1 cut(s) 1285
OliI CACNNNNGTG 1 cut(s) 869
PciSI GCTCTTC 1 cut(s) 299
PctI GAATGC 1 cut(s) 874
PfeI GAWTC 5 cut(s) 418, 739, 838, 1062, 1128
PkrI GCNGC 6 cut(s) 386, 507, 943, 946, 1172, 1194
PleI GAGTC 2 cut(s) 490, 702
PluTI GGCGCC 1 cut(s) 52
PpsI GAGTC 2 cut(s) 490, 702
Psp124BI GAGCTC 1 cut(s) 294
Psp6I CCWGG 3 cut(s) 308, 423, 841
PspEI GGTNACC 1 cut(s) 440
PspFI CCCAGC 2 cut(s) 43, 1262
PspGI CCWGG 3 cut(s) 308, 423, 841
PspN4I GGNNCC 4 cut(s) 50, 209, 574, 707
PstI CTGCAG 1 cut(s) 943
PvuII CAGCTG 1 cut(s) 1262
RsaI GTAC 3 cut(s) 38, 67, 665
RsaNI GTAC 3 cut(s) 37, 66, 664
RseI CAYNNNNRTG 5 cut(s) 26, 213, 659, 822, 869
SacI GAGCTC 1 cut(s) 294
SacII CCGCGG 1 cut(s) 388
SapI GCTCTTC 1 cut(s) 299
SaqAI TTAA 4 cut(s) 123, 813, 1304, 1317
SatI GCNGC 6 cut(s) 385, 506, 942, 945, 1171, 1193
SchI GAGTC 2 cut(s) 491, 703
ScrFI CCNGG 4 cut(s) 310, 425, 843, 1002
SduI GDGCHC 1 cut(s) 294
SfaNI GCATC 5 cut(s) 18, 183, 814, 1124, 1195
SfcI CTRYAG 1 cut(s) 939
SfoI GGCGCC 1 cut(s) 50
Sfr303I CCGCGG 1 cut(s) 388
SgrBI CCGCGG 1 cut(s) 388
SmiMI CAYNNNNRTG 5 cut(s) 26, 213, 659, 822, 869
SmlI CTYRAG 2 cut(s) 320, 446
SmoI CTYRAG 2 cut(s) 320, 446
Sse9I AATT 3 cut(s) 930, 1100, 1286
SsiI CCGC 4 cut(s) 385, 387, 698, 759
SspDI GGCGCC 1 cut(s) 48
SspMI CTAG 1 cut(s) 336
SstI GAGCTC 1 cut(s) 294
StyD4I CCNGG 4 cut(s) 308, 423, 841, 1000
StyI CCWWGG 2 cut(s) 267, 576
TaaI ACNGT 6 cut(s) 354, 401, 794, 899, 1056, 1156
TaiI ACGT 1 cut(s) 615
TaqI TCGA 3 cut(s) 91, 485, 1218
TasI AATT 3 cut(s) 930, 1100, 1286
TatI WGTACW 1 cut(s) 663
TauI GCSGC 1 cut(s) 387
TfiI GAWTC 5 cut(s) 418, 739, 838, 1062, 1128
Tru1I TTAA 4 cut(s) 123, 813, 1304, 1317
Tru9I TTAA 4 cut(s) 123, 813, 1304, 1317
TscAI CASTG 1 cut(s) 871
TseFI GTSAC 2 cut(s) 1056, 1222
TseI GCWGC 5 cut(s) 505, 941, 944, 1170, 1192
Tsp45I GTSAC 2 cut(s) 1056, 1222
TspDTI ATGAA 4 cut(s) 113, 246, 971, 1154
TspGWI ACGGA 2 cut(s) 751, 1164
TspRI CASTG 1 cut(s) 871
XapI RAATTY 1 cut(s) 1100
XceI RCATGY 1 cut(s) 1285
XspI CTAG 1 cut(s) 336
Zsp2I ATGCAT 1 cut(s) 1139
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.