Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0015822

Physical Location & Seq

Genomic Coordinates Forward (+)

60887959 .. 60891986

Gene Structure 4028 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0454900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1221 bp

ATGGCGACTCTGCAACTCCTCACTACAGATTTCTCCAAACCAATGATTCTCCTCAAACCCTCTCTCTTCGTCTCCAGTACTCCTCCACGTCATTGCCCCACCTCTCTCCCTCGCTTCATTCCCAGAGCCTGTTCTTCTTCTTCTTCTCCCCTCAGTCGCCGCCACTTCGTCTCCGAGACGGCGGCGCTGTCTCTCGCCCTAACCGTGCCGTTGCTCGGCTCCCCTCAACCGGCCAAGTCCGAAGAGCCCGCCCTCTCCGAGTGGGAGAAAGTCTCCCTCCCTATCGACCCCGGCGTCGTCCTTCTCGACATCGCTTTCGTCCCCGACGACCCTAAACACGGATTTCTGTTGGGAACAAGGCAGACACTTTTGGAGACCAAGGACGGTGGACAAAGCTGGGCACCGCGGTCAATTCCGTCTGCTGAAGATGAAGATTTTAACTACAGGTTCAATGCCATAAGCTTCAAAGGGAAGGAGGGCTGGATTGTTGGAAAGCCTGCAATTCTGTTGCACACTTCTGATGCTGGCGACAGCTGGGAACGAATACCGCTAAGCTCTCAGCTGCCAGGAGATATGGTATATATAAAGGCAACTGGTGAGAAGAGCGCAGAGATGGTGACTGACGAAGGTGCGATTTATGTGACCTCCAATAGGGGATACAATTGGAGGGCTGCTGTTCAGGAGACTGTTTCAGCTACTCTTAATAGAACAGTCTCTAGTGGCATTAGCGGTGCAAGTTACTACACAGGAACTTTTAATGCCGTCAATCGCTCCCCAAATGGAAGCTATGTTGCTGTCTCAAGTCGTGGTAACTTCTTCCTTACTTGGGAGCCTGGTCAGCCATACTGGCAGCCACATAACAGATCAATTGCAAGAAGAATCCAAAACATGGGTTGGAGAGCTGATGGTGGTCTTTGGCTTCTTGTTCGTGGAGGGGGACTTTTTCTGAGCAAAGGTACAGGGATAACAGAGGAGTTTGAAGAAGTTCCAGTCCAAAGCCGGGGTTTTGGCATTCTTGATGTTGGGTACCGATCAAAGGATGAGGCTTGGGCAGCAGGTGGAAGTGGGATTTTATTGCGAACTACCAATGGTGGCAAGACATGGGTCCGTGACAAAGCAGCCGACAATATTGCTGCAAATCTATACTCTGTAAAGTTTATCGATGACAATCAAGGATTTGTGCTGGGGAACGATGGGGTATTGCTTCGGTATCTTGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018107 GO:0018193 GO:0018209 GO:0018210 GO:0019538 GO:0023052 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0097305 GO:0140096 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04068 ko04113 ko04138 ko04140 ko04150 ko04151 ko04152 ko04211 ko04213 ko04371 ko04530 ko04710 ko04714 ko04910 ko04920 ko04921 ko04922 ko04931 ko04932 ko05410 ko05418 map04068 map04113 map04138 map04140 map04150 map04151 map04152 map04211 map04213 map04371 map04530 map04710 map04714 map04910 map04920 map04921 map04922 map04931 map04932 map05410 map05418

Pfam Domains

Protein Families

NAF Pkinase

Protein Analysis

406

Amino Acids

44.18

Weight (kDa)

6.98

Isoelectric Point (pI)

39.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PSII_BNR	PF14870	84 - 404	2e-124	Photosynthesis system II assembly factor YCF48

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015822)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G45820
fragaria_vesca	FvH4_3g07630
malus_domestica	MD05G1298900.v1.1 MD10G1278400.v1.1
prunus_persica	Prupe.4G062900_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0011061
rosa_laevigata	RLG00000031806
rosa_multiflora	Rmu_sc0003242.1_g000007
rosa_roxburghii	Rroxscaffold_1G00065350
rosa_rugosa	Rorug04G0454900
rosa_samantha	Rh5AG087000 Rh5BG081900 Rh5CG094700
rosa_wichuraiana	Rw0G000150 Rw0G017800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1046
AasI	GACNNNNNNGTC	1 cut(s)	293
Acc36I	ACCTGC	1 cut(s)	1046
Acc65I	GGTACC	1 cut(s)	1026
AccB1I	GGYRCC	2 cut(s)	400, 1026
AccB7I	CCANNNNNTGG	1 cut(s)	889
AccII	CGCG	1 cut(s)	406
AciI	CCGC	7 cut(s)	160, 182, 249, 404, 406, 548, 729
AcoI	YGGCCR	1 cut(s)	231
AcuI	CTGAAG	1 cut(s)	444
AcyI	GRCGYC	1 cut(s)	294
AfaI	GTAC	3 cut(s)	79, 958, 1028
AfiI	CCNNNNNNNGG	8 cut(s)	215, 229, 338, 651, 826, 889, 1000, 1036
AgsI	TTSAA	3 cut(s)	451, 466, 980
AjiI	CACGTC	1 cut(s)	89
AjnI	CCWGG	2 cut(s)	565, 832
AluBI	AGCT	8 cut(s)	396, 462, 534, 555, 562, 695, 786, 902
AluI	AGCT	8 cut(s)	396, 462, 534, 555, 562, 695, 786, 902
Alw26I	GTCTC	9 cut(s)	76, 170, 175, 195, 277, 368, 677, 718, 802
AlwNI	CAGNNNCTG	1 cut(s)	129
AoxI	GGCC	1 cut(s)	231
ApeKI	GCWGC	6 cut(s)	562, 671, 850, 1052, 1118, 1133
ArsI	GACNNNNNNTTYG	2 cut(s)	299, 331
Asp700I	GAANNNNTTC	1 cut(s)	984
Asp718I	GGTACC	1 cut(s)	1026
AspLEI	GCGC	2 cut(s)	187, 608
AspS9I	GGNCC	1 cut(s)	1105
AsuC2I	CCSGG	2 cut(s)	291, 1001
AsuHPI	GGTGA	2 cut(s)	608, 628
AvaII	GGWCC	1 cut(s)	1105
BaeGI	GKGCMC	1 cut(s)	403
BanI	GGYRCC	2 cut(s)	400, 1026
BanII	GRGCYC	1 cut(s)	249
BbvI	GCAGC	6 cut(s)	549, 658, 862, 1064, 1120, 1130
BccI	CCATC	3 cut(s)	607, 899, 1187
BceAI	ACGGC	3 cut(s)	193, 195, 746
BcgI	CGANNNNNNTGC	2 cut(s)	1112, 1146
BciT130I	CCWGG	2 cut(s)	567, 834
BciVI	GTATCC	1 cut(s)	650
BcnI	CCSGG	2 cut(s)	291, 1001
BcoDI	GTCTC	9 cut(s)	76, 170, 175, 195, 277, 368, 677, 718, 802
BfaI	CTAG	1 cut(s)	717
BfmI	CTRYAG	2 cut(s)	24, 442
BfoI	RGCGCY	1 cut(s)	188
BfuAI	ACCTGC	1 cut(s)	1046
BfuI	GTATCC	1 cut(s)	650
BglI	GCCNNNNNGGC	1 cut(s)	847
BisI	GCNGC	8 cut(s)	160, 183, 563, 672, 851, 1053, 1119, 1134
BlpI	GCTNAGC	1 cut(s)	551
BlsI	GCNGC	8 cut(s)	161, 184, 564, 673, 852, 1054, 1120, 1135
BmcAI	AGTACT	1 cut(s)	79
Bme1390I	CCNGG	4 cut(s)	291, 567, 834, 1001
Bme18I	GGWCC	1 cut(s)	1105
BmgBI	CACGTC	1 cut(s)	89
BmgT120I	GGNCC	1 cut(s)	1105
BmiI	GGNNCC	5 cut(s)	220, 402, 831, 1028, 1106
BmrFI	CCNGG	4 cut(s)	291, 567, 834, 1001
BmsI	GCATC	1 cut(s)	511
BoxI	GACNNNNGTC	1 cut(s)	1103
BplI	GAGNNNNNCTC	2 cut(s)	257, 289
BpmI	CTGGAG	1 cut(s)	58
Bpu1102I	GCTNAGC	1 cut(s)	551
BpuEI	CTTGAG	1 cut(s)	784
BpuMI	CCSGG	2 cut(s)	291, 1001
Bsa29I	ATCGAT	1 cut(s)	1161
BsaBI	GATNNNNATC	1 cut(s)	1167
BsaHI	GRCGYC	1 cut(s)	294
BsaI	GGTCTC	1 cut(s)	368
BsaJI	CCNNGG	4 cut(s)	289, 378, 404, 1000
BsaXI	ACNNNNNCTCC	4 cut(s)	155, 185, 561, 591
Bsc4I	CCNNNNNNNGG	8 cut(s)	215, 229, 338, 651, 826, 889, 1000, 1036
Bse118I	RCCGGY	1 cut(s)	229
Bse1I	ACTGG	4 cut(s)	75, 598, 851, 989
Bse3DI	GCAATG	1 cut(s)	91
Bse8I	GATNNNNATC	1 cut(s)	1167
BseBI	CCWGG	2 cut(s)	567, 834
BseCI	ATCGAT	1 cut(s)	1161
BseDI	CCNNGG	4 cut(s)	289, 378, 404, 1000
BseGI	GGATG	1 cut(s)	1045
BseJI	GATNNNNATC	1 cut(s)	1167
BseLI	CCNNNNNNNGG	8 cut(s)	215, 229, 338, 651, 826, 889, 1000, 1036
BseMI	GCAATG	1 cut(s)	91
BseMII	CTCAG	3 cut(s)	166, 572, 938
BseNI	ACTGG	4 cut(s)	75, 598, 851, 989
BseRI	GAGGAG	4 cut(s)	8, 41, 72, 986
BseSI	GKGCMC	1 cut(s)	403
BseXI	GCAGC	6 cut(s)	549, 658, 862, 1064, 1120, 1130
BseYI	CCCAGC	3 cut(s)	396, 534, 1183
Bsh1236I	CGCG	1 cut(s)	406
BshFI	GGCC	1 cut(s)	233
BshNI	GGYRCC	2 cut(s)	400, 1026
BshVI	ATCGAT	1 cut(s)	1161
BsiSI	CCGG	3 cut(s)	230, 291, 1000
BslFI	GGGAC	2 cut(s)	305, 951
BslI	CCNNNNNNNGG	8 cut(s)	215, 229, 338, 651, 826, 889, 1000, 1036
BsmAI	GTCTC	9 cut(s)	76, 170, 175, 195, 277, 368, 677, 718, 802
BsmBI	CGTCTC	3 cut(s)	76, 170, 175
BsmFI	GGGAC	2 cut(s)	305, 951
BsmI	GAATGC	1 cut(s)	1011
BsnI	GGCC	1 cut(s)	233
Bso31I	GGTCTC	1 cut(s)	368
Bsp1286I	GDGCHC	2 cut(s)	249, 403
Bsp143I	GATC	2 cut(s)	863, 1031
Bsp1720I	GCTNAGC	1 cut(s)	551
BspACI	CCGC	7 cut(s)	160, 182, 249, 404, 406, 548, 729
BspANI	GGCC	1 cut(s)	233
BspCNI	CTCAG	3 cut(s)	165, 571, 939
BspDI	ATCGAT	1 cut(s)	1161
BspFNI	CGCG	1 cut(s)	406
BspLI	GGNNCC	5 cut(s)	220, 402, 831, 1028, 1106
BspMI	ACCTGC	1 cut(s)	1046
BspQI	GCTCTTC	2 cut(s)	237, 596
BspT107I	GGYRCC	2 cut(s)	400, 1026
BspTNI	GGTCTC	1 cut(s)	368
BsrDI	GCAATG	1 cut(s)	91
BsrFI	RCCGGY	1 cut(s)	229
BsrI	ACTGG	4 cut(s)	75, 598, 851, 989
BssAI	RCCGGY	1 cut(s)	229
BssECI	CCNNGG	4 cut(s)	289, 378, 404, 1000
BssMI	GATC	2 cut(s)	863, 1031
BssNI	GRCGYC	1 cut(s)	294
BssT1I	CCWWGG	1 cut(s)	378
Bst2UI	CCWGG	2 cut(s)	567, 834
Bst4CI	ACNGT	4 cut(s)	205, 386, 688, 712
Bst6I	CTCTTC	3 cut(s)	71, 237, 596
BstACI	GRCGYC	1 cut(s)	294
BstC8I	GCNNGC	3 cut(s)	249, 498, 526
BstDEI	CTNAG	4 cut(s)	152, 551, 558, 947
BstDSI	CCRYGG	1 cut(s)	404
BstENI	CCTNNNNNAGG	1 cut(s)	649
BstF5I	GGATG	1 cut(s)	1045
BstFNI	CGCG	1 cut(s)	406
BstH2I	RGCGCY	1 cut(s)	188
BstHHI	GCGC	2 cut(s)	187, 608
BstKTI	GATC	2 cut(s)	866, 1034
BstMAI	GTCTC	9 cut(s)	76, 170, 175, 195, 277, 368, 677, 718, 802
BstMBI	GATC	2 cut(s)	863, 1031
BstMWI	GCNNNNNNNGC	3 cut(s)	838, 847, 1052
BstNI	CCWGG	2 cut(s)	567, 834
BstPAI	GACNNNNGTC	1 cut(s)	1103
BstSCI	CCNGG	4 cut(s)	289, 565, 832, 999
BstSFI	CTRYAG	2 cut(s)	24, 442
BstSLI	GKGCMC	1 cut(s)	403
BstUI	CGCG	1 cut(s)	406
BstV1I	GCAGC	6 cut(s)	549, 658, 862, 1064, 1120, 1130
Bsu15I	ATCGAT	1 cut(s)	1161
BsuI	GTATCC	1 cut(s)	650
BsuRI	GGCC	1 cut(s)	233
BsuTUI	ATCGAT	1 cut(s)	1161
BtgI	CCRYGG	1 cut(s)	404
BtgZI	GCGATG	1 cut(s)	295
BtrI	CACGTC	1 cut(s)	89
BtsCI	GGATG	1 cut(s)	1045
BveI	ACCTGC	1 cut(s)	1046
Cac8I	GCNNGC	3 cut(s)	249, 498, 526
CaiI	CAGNNNCTG	1 cut(s)	129
CfoI	GCGC	2 cut(s)	187, 608
Cfr10I	RCCGGY	1 cut(s)	229
Cfr13I	GGNCC	1 cut(s)	1105
Cfr42I	CCGCGG	1 cut(s)	407
ClaI	ATCGAT	1 cut(s)	1161
CseI	GACGC	1 cut(s)	283
Csp6I	GTAC	3 cut(s)	78, 957, 1027
CspCI	CAANNNNNGTGG	2 cut(s)	367, 402
CviAII	CATG	2 cut(s)	889, 1101
CviQI	GTAC	3 cut(s)	78, 957, 1027
DdeI	CTNAG	4 cut(s)	152, 551, 558, 947
DpnI	GATC	2 cut(s)	865, 1033
DpnII	GATC	2 cut(s)	863, 1031
DrdI	GACNNNNNNGTC	1 cut(s)	293
DseDI	GACNNNNNNGTC	1 cut(s)	293
EaeI	YGGCCR	1 cut(s)	231
Eam1104I	CTCTTC	3 cut(s)	71, 237, 596
EarI	CTCTTC	3 cut(s)	71, 237, 596
Eco130I	CCWWGG	1 cut(s)	378
Eco24I	GRGCYC	1 cut(s)	249
Eco31I	GGTCTC	1 cut(s)	368
Eco47I	GGWCC	1 cut(s)	1105
Eco57I	CTGAAG	1 cut(s)	444
EcoNI	CCTNNNNNAGG	1 cut(s)	649
EcoRII	CCWGG	2 cut(s)	565, 832
EcoT14I	CCWWGG	1 cut(s)	378
EcoT38I	GRGCYC	1 cut(s)	249
ErhI	CCWWGG	1 cut(s)	378
Esp3I	CGTCTC	3 cut(s)	76, 170, 175
FaeI	CATG	2 cut(s)	892, 1104
FaqI	GGGAC	2 cut(s)	305, 951
FatI	CATG	2 cut(s)	888, 1100
FauI	CCCGC	1 cut(s)	256
Fnu4HI	GCNGC	8 cut(s)	160, 183, 563, 672, 851, 1053, 1119, 1134
FokI	GGATG	1 cut(s)	1052
FriOI	GRGCYC	1 cut(s)	249
Fsp4HI	GCNGC	8 cut(s)	160, 183, 563, 672, 851, 1053, 1119, 1134
FspBI	CTAG	1 cut(s)	717
GlaI	GCGC	2 cut(s)	186, 607
GluI	GCNGC	8 cut(s)	160, 183, 563, 672, 851, 1053, 1119, 1134
GsaI	CCCAGC	3 cut(s)	400, 538, 1187
GsuI	CTGGAG	1 cut(s)	58
HaeII	RGCGCY	1 cut(s)	188
HaeIII	GGCC	1 cut(s)	233
HapII	CCGG	3 cut(s)	230, 291, 1000
HgaI	GACGC	1 cut(s)	283
HhaI	GCGC	2 cut(s)	187, 608
Hin1I	GRCGYC	1 cut(s)	294
Hin1II	CATG	2 cut(s)	892, 1104
Hin6I	GCGC	2 cut(s)	185, 606
HinP1I	GCGC	2 cut(s)	185, 606
HindIII	AAGCTT	1 cut(s)	460
HinfI	GANTC	3 cut(s)	7, 46, 879
HpaII	CCGG	3 cut(s)	230, 291, 1000
HphI	GGTGA	2 cut(s)	608, 628
Hpy166II	GTNNAC	1 cut(s)	389
Hpy188I	TCNGA	5 cut(s)	175, 241, 259, 520, 948
Hpy188III	TCNNGA	3 cut(s)	305, 680, 1016
Hpy8I	GTNNAC	1 cut(s)	389
Hpy99I	CGWCG	2 cut(s)	299, 329
HpyAV	CCTTC	3 cut(s)	311, 466, 620
HpyCH4III	ACNGT	4 cut(s)	205, 386, 688, 712
HpyCH4IV	ACGT	1 cut(s)	88
HpyCH4V	TGCA	6 cut(s)	13, 500, 511, 734, 872, 1136
HpyF10VI	GCNNNNNNNGC	3 cut(s)	838, 847, 1052
HpyF3I	CTNAG	4 cut(s)	152, 551, 558, 947
HpySE526I	ACGT	1 cut(s)	88
Hsp92I	GRCGYC	1 cut(s)	294
Hsp92II	CATG	2 cut(s)	892, 1104
HspAI	GCGC	2 cut(s)	185, 606
KpnI	GGTACC	1 cut(s)	1030
KspI	CCGCGG	1 cut(s)	407
Kzo9I	GATC	2 cut(s)	863, 1031
LguI	GCTCTTC	2 cut(s)	237, 596
LmnI	GCTCC	3 cut(s)	224, 776, 829
Lsp1109I	GCAGC	6 cut(s)	549, 658, 862, 1064, 1120, 1130
LweI	GCATC	1 cut(s)	511
MaeI	CTAG	1 cut(s)	717
MaeII	ACGT	1 cut(s)	88
MaeIII	GTNAC	5 cut(s)	616, 640, 737, 809, 1109
MalI	GATC	2 cut(s)	865, 1033
MboI	GATC	2 cut(s)	863, 1031
MfeI	CAATTG	2 cut(s)	661, 867
MhlI	GDGCHC	2 cut(s)	249, 403
MluCI	AATT	4 cut(s)	411, 501, 661, 867
MmeI	TCCRAC	2 cut(s)	469, 875
MroXI	GAANNNNTTC	1 cut(s)	984
MseI	TTAA	3 cut(s)	438, 702, 756
MspA1I	CMGCKG	3 cut(s)	406, 534, 562
MspI	CCGG	3 cut(s)	230, 291, 1000
MspR9I	CCNGG	4 cut(s)	291, 567, 834, 1001
MunI	CAATTG	2 cut(s)	661, 867
Mva1269I	GAATGC	1 cut(s)	1011
MvaI	CCWGG	2 cut(s)	567, 834
MvnI	CGCG	1 cut(s)	406
MwoI	GCNNNNNNNGC	3 cut(s)	838, 847, 1052
NciI	CCSGG	2 cut(s)	291, 1001
NdeII	GATC	2 cut(s)	863, 1031
NlaIII	CATG	2 cut(s)	892, 1104
NlaIV	GGNNCC	5 cut(s)	220, 402, 831, 1028, 1106
NmeAIII	GCCGAG	1 cut(s)	195
NmuCI	GTSAC	3 cut(s)	616, 640, 1109
PaqCI	CACCTGC	1 cut(s)	1046
PciSI	GCTCTTC	2 cut(s)	237, 596
PcsI	WCGNNNNNNNCGW	4 cut(s)	201, 291, 303, 324
PctI	GAATGC	1 cut(s)	1011
PdmI	GAANNNNTTC	1 cut(s)	984
PfeI	GAWTC	2 cut(s)	46, 879
PflMI	CCANNNNNTGG	1 cut(s)	889
PkrI	GCNGC	8 cut(s)	161, 184, 564, 673, 852, 1054, 1120, 1135
PshAI	GACNNNNGTC	1 cut(s)	1103
Psp6I	CCWGG	2 cut(s)	565, 832
PspFI	CCCAGC	3 cut(s)	396, 534, 1183
PspGI	CCWGG	2 cut(s)	565, 832
PspN4I	GGNNCC	5 cut(s)	220, 402, 831, 1028, 1106
PspPI	GGNCC	1 cut(s)	1105
PstNI	CAGNNNCTG	1 cut(s)	129
PvuII	CAGCTG	2 cut(s)	534, 562
RsaI	GTAC	3 cut(s)	79, 958, 1028
RsaNI	GTAC	3 cut(s)	78, 957, 1027
SacII	CCGCGG	1 cut(s)	407
SapI	GCTCTTC	2 cut(s)	237, 596
SaqAI	TTAA	3 cut(s)	438, 702, 756
SatI	GCNGC	8 cut(s)	160, 183, 563, 672, 851, 1053, 1119, 1134
Sau3AI	GATC	2 cut(s)	863, 1031
Sau96I	GGNCC	1 cut(s)	1105
ScaI	AGTACT	1 cut(s)	79
ScrFI	CCNGG	4 cut(s)	291, 567, 834, 1001
SduI	GDGCHC	2 cut(s)	249, 403
SfaNI	GCATC	1 cut(s)	511
SfcI	CTRYAG	2 cut(s)	24, 442
Sfr303I	CCGCGG	1 cut(s)	407
SgrBI	CCGCGG	1 cut(s)	407
SinI	GGWCC	1 cut(s)	1105
SmlI	CTYRAG	1 cut(s)	799
SmoI	CTYRAG	1 cut(s)	799
Sse9I	AATT	4 cut(s)	411, 501, 661, 867
SsiI	CCGC	7 cut(s)	160, 182, 249, 404, 406, 548, 729
SspI	AATATT	1 cut(s)	1129
SspMI	CTAG	1 cut(s)	717
StyD4I	CCNGG	4 cut(s)	289, 565, 832, 999
StyI	CCWWGG	1 cut(s)	378
TaaI	ACNGT	4 cut(s)	205, 386, 688, 712
TaiI	ACGT	1 cut(s)	91
TaqI	TCGA	3 cut(s)	285, 306, 1161
TasI	AATT	4 cut(s)	411, 501, 661, 867
TatI	WGTACW	1 cut(s)	77
TauI	GCSGC	2 cut(s)	162, 185
TfiI	GAWTC	2 cut(s)	46, 879
Tru1I	TTAA	3 cut(s)	438, 702, 756
Tru9I	TTAA	3 cut(s)	438, 702, 756
TseFI	GTSAC	3 cut(s)	616, 640, 1109
TseI	GCWGC	6 cut(s)	562, 671, 850, 1052, 1118, 1133
Tsp45I	GTSAC	3 cut(s)	616, 640, 1109
TspDTI	ATGAA	2 cut(s)	106, 444
TspGWI	ACGGA	3 cut(s)	354, 405, 1097
Van91I	CCANNNNNTGG	1 cut(s)	889
VpaK11BI	GGWCC	1 cut(s)	1105
XagI	CCTNNNNNAGG	1 cut(s)	649
XmnI	GAANNNNTTC	1 cut(s)	984
XspI	CTAG	1 cut(s)	717
ZrmI	AGTACT	1 cut(s)	79

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.