Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0008850

Physical Location & Seq

Genomic Coordinates Forward (+)

6537562 .. 6541516

Gene Structure 3955 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g11100.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2334 bp

ATGAGAGAAGAGAACCCATCTGAGACCAGAGCCAGAGCAACCAAGTTTTCTGACCAAAACCAGGCACCAAGGTCTCAAAACACAAAGGGCAACAGCAACACATCAAAACTGAAGTCTGCTTCTTCATGGGGATCTCACATAGTCAAAGGGTTCGGAGGAGACAAGAAGACGAAAGTGCTAAACGCAGTGACGAGCAAGAAGCCGCCGTTAATGGGTTGCGATTTGTCGAATCCGAAACCTCAGTTGCCATTAGCCCCTGCTCATTCATCACGAGTCAAGCGTTCGCTGATCGGAGACTTGTCTTGCTCAGTCAACAATGCTAATCAGATGTACCAGACCCACCGGAGACAGTCTTCGCGGGACTTGTTTCTCGAGCTTGATCACTTGAGGAACCTGCTGCAGGATTCGAAAGAGAGGGAGTTTCAGCTGCAGGCTGAGCTTTCGGAATGTAAGAGGAATCCGAGGGTTTTGGAGCTGGAGAGGGAGCTGGAGGCGAAAAGGAGAGAATTGGATGGTGTGATGAGGAAAGTTGAGGTGCTGGAAGAGGAGAAGGCTAGTCTAGCTGAGCAATTAGTGTCGATTTCGGAGAGGAGTGAAGAGGTGTTGAAGAGGGAAGACCAGGAATGTGGGGTGGTTTCAGCGTCAGGAAGTGTGGAGATGGAGGTTTTAGAGTTGAGAAGACTCAACAAGGAGCTACAGCTTCAGAAAAGAAACCTTGCTTGTAAACTTTCCGCTGTGACAGCCCAATTGGCTTCTCCAGCAAAACCTTCTGAGAGTGACATTGTTGAGAAAATCAAAGCCGAGGCGTCTATGTTAAGGCATACAAATGAAGATTTGTGCAAACAAGTTGAGGGGTTACAGATGAACAGGTTGAATGAGGTTGAGGAGCTAGCATACCTTAGGTGGGTCAATTCTTGTTTAAGAAATGAGTTGCAGAACTCTGACAAGCTGCAGAGTCCAAATTCGATTGATAGGAGTAGTAAATCAGCTGGGGACTTGTCGAGTAGGAGCAATGACTACTTGGAATTCAAGAGTGTGAAGAGAATGAATTTGGTAAAGAAGCTGAAAAAGTGGCCTATTGCTAATGAGGATGTGCCTAACCTGGAATCATCCCCAGATGAGCTCTTGGATAAAAGTTGGGTTGATTCAGATGAAGGAAGAAGTCCTAGAAGAAGACACTCAATCAGCGGATCCAAGTGCTTTGCAGAAGAGCTGGTGCTGTCTAGTAAGAGAAGGCAATCCGATGGTTTTATGTGCCCCCCAGAAATTGAGAAGGATATAGAGCCAGTGGCTTCTCAAAAATATGATTTGGGAATGCTCCAATGCCATGAAATCCATAAAATTCCGGCTTCGTTTGATGTTGAGAAAAGGGCATTGCGCATTCCAAATCCCCCTCCTAGGCCTTCATGTTCTAATTCTAGTGGAACCAAAGTGGATGAGTCTATGAAAGTGCCGCCACCACCGCCTCCGCCCCCTCCACCTCCTCCAAAGTTTGCAGCAAGGACTAATACTGCAGGAACGGTGCAAAGAGCCCCACAAGTAGTTGAGTTCTATCATTCACTCATGAAAAGAGATTCCAGGAAGGATTCTTCAACTGGAGGAATTTGTGATGCACCAGATGTTGCCAATGTTCGTAGTAATATGATTGGAGAAATTGAAAACCGATCATCACATTTGCTTGCTATAAAGGCAGATGTTGAGACTCAAGGAGAATTTGTAAATTCACTGATAAGAGAGGTGAACAATGCTGTATATCATAGCATTGAAGATGTTGTGGCTTTTGTAAAGTGGCTCGATGACGAACTTTGCTTTCTTGTGGATGAAAGAGCAGTCCTAAAGCACTTTGATTGGCCAGAAAAGAAAGCAGACACACTGAGAGAAGCAGCATTTGGCTATAGAGATTTGAAGAAACTGGACCTTGAAGTGTCTTCTTTCAAAGATGATACTCGAACGCCATGTGATATTGCGCTCAAGAAAATGGTTGCCTTGTCTGAGAAGATGGAGCGTACAGTTTACAACATTCTCCGAACAAGGGAGTCCTTGATGCGTCATTGCAGGGATTATCAAATACCAACAGACTGGATGCTTGACAATGGCATTTTAAGCAAGATAAAATTTGGCTCAGTCAAGCTAGCAAAGATGTATATGAAGAGGGTGGCTATGGAACTACAGTCAAAGGCAGCAGCAGAGAAAGATCCTGCAATGGACTATATGCTGCTTCAGGGAGTGAGATTTGCCTTCAGAATTCATCAGTTTGCAGGAGGTTTTGATGCAGACACAATGCATGCATTTGAGGAACTTCGCTACCTTGCCCATCTTCTTAACAAAAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

778

Amino Acids

88.07

Weight (kDa)

8.51

Isoelectric Point (pI)

63.94

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008850)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g11100 FvH4_3g11100 FvH4_3g11100 FvH4_3g11100
malus_domestica	MD05G1264200.v1.1 MD10G1242300.v1.1
prunus_persica	Prupe.4G101400_v2.0.a1 Prupe.4G101400_v2.0.a1 Prupe.4G101400_v2.0.a1
pyrus_communis	pycom05g24830 pycom05g24840 pycom10g20290
rosa_chinensis	RchiOBHm_Chr5g0017991
rosa_laevigata	RLG00000032329
rosa_multiflora	Rmu_sc0010280.1_g000003 Rmu_sc0011118.1_g000004
rosa_roxburghii	Rroxscaffold_1G00059610
rosa_rugosa	Rorug05G0039500
rosa_samantha	Rh5AG132400 Rh5BG130500 Rh5CG142900 Rh5DG132500
rosa_wichuraiana	Rw5G011530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1379
Acc36I	ACCTGC	1 cut(s)	402
AccB1I	GGYRCC	1 cut(s)	64
AccII	CGCG	1 cut(s)	358
AciI	CCGC	7 cut(s)	203, 358, 732, 1188, 1454, 1463, 1469
AclWI	GGATC	4 cut(s)	139, 1185, 1198, 2189
AcoI	YGGCCR	1 cut(s)	1850
AcsI	RAATTY	9 cut(s)	961, 1025, 1048, 1341, 1602, 1712, 1720, 2114, 2244
AcuI	CTGAAG	4 cut(s)	131, 686, 2204, 2224
AcyI	GRCGYC	1 cut(s)	806
AfaI	GTAC	2 cut(s)	332, 2008
AfiI	CCNNNNNNNGG	6 cut(s)	61, 212, 400, 904, 1398, 2032
AgsI	TTSAA	9 cut(s)	607, 874, 1030, 1593, 1658, 1766, 1906, 1922, 1936
AjnI	CCWGG	4 cut(s)	60, 618, 1101, 1577
AjuI	GAANNNNNNNTTGG	2 cut(s)	1872, 1904
Alw21I	GWGCWC	1 cut(s)	1125
Alw26I	GTCTC	6 cut(s)	17, 78, 153, 288, 340, 1694
AlwI	GGATC	4 cut(s)	139, 1185, 1198, 2189
Ama87I	CYCGRG	1 cut(s)	371
AoxI	GGCC	3 cut(s)	1073, 1400, 1850
ApeKI	GCWGC	8 cut(s)	397, 427, 949, 1496, 1883, 2180, 2183, 2215
ApoI	RAATTY	9 cut(s)	961, 1025, 1048, 1341, 1602, 1712, 1720, 2114, 2244
ArsI	GACNNNNNNTTYG	2 cut(s)	98, 130
AspA2I	CCTAGG	1 cut(s)	1397
AspLEI	GCGC	2 cut(s)	1380, 1969
AspS9I	GGNCC	1 cut(s)	1915
AsuHPI	GGTGA	1 cut(s)	1750
AsuII	TTCGAA	1 cut(s)	407
AsuNHI	GCTAGC	2 cut(s)	889, 2131
AvaI	CYCGRG	1 cut(s)	371
AvaII	GGWCC	1 cut(s)	1915
AvrII	CCTAGG	1 cut(s)	1397
AxyI	CCTNAGG	1 cut(s)	899
BaeGI	GKGCMC	1 cut(s)	1259
BalI	TGGCCA	1 cut(s)	1852
BamHI	GGATCC	1 cut(s)	1190
BanI	GGYRCC	1 cut(s)	64
BanII	GRGCYC	2 cut(s)	1125, 1534
BauI	CACGAG	1 cut(s)	270
BbsI	GAAGAC	6 cut(s)	173, 345, 621, 685, 1180, 1920
Bbv12I	GWGCWC	1 cut(s)	1125
BbvI	GCAGC	8 cut(s)	384, 414, 936, 1508, 1895, 2192, 2195, 2202
BccI	CCATC	6 cut(s)	25, 506, 652, 1238, 1993, 2322
BceAI	ACGGC	1 cut(s)	190
BciT130I	CCWGG	4 cut(s)	62, 620, 1103, 1579
BclI	TGATCA	1 cut(s)	379
BcoDI	GTCTC	6 cut(s)	17, 78, 153, 288, 340, 1694
BfaI	CTAG	8 cut(s)	555, 560, 890, 1167, 1224, 1398, 1419, 2132
BfmI	CTRYAG	7 cut(s)	398, 428, 695, 950, 1512, 1894, 2168
BfuAI	ACCTGC	1 cut(s)	402
BglI	GCCNNNNNGGC	1 cut(s)	749
BlnI	CCTAGG	1 cut(s)	1397
BlpI	GCTNAGC	2 cut(s)	435, 564
Bme1390I	CCNGG	4 cut(s)	62, 620, 1103, 1579
Bme18I	GGWCC	1 cut(s)	1915
BmeT110I	CYCGRG	1 cut(s)	371
BmgT120I	GGNCC	1 cut(s)	1915
BmiI	GGNNCC	4 cut(s)	66, 392, 1192, 1426
BmrFI	CCNGG	4 cut(s)	62, 620, 1103, 1579
BmsI	GCATC	4 cut(s)	1600, 2034, 2073, 2260
BmtI	GCTAGC	2 cut(s)	893, 2135
BpiI	GAAGAC	6 cut(s)	173, 345, 621, 685, 1180, 1920
BpmI	CTGGAG	4 cut(s)	497, 509, 741, 1617
Bpu1102I	GCTNAGC	2 cut(s)	435, 564
Bpu14I	TTCGAA	1 cut(s)	407
BpuEI	CTTGAG	3 cut(s)	406, 1689, 1955
BsaHI	GRCGYC	1 cut(s)	806
BsaI	GGTCTC	2 cut(s)	17, 78
BsaJI	CCNNGG	4 cut(s)	68, 461, 801, 1397
BsaWI	WCCGGW	1 cut(s)	342
BsaXI	ACNNNNNCTCC	2 cut(s)	1701, 1731
Bsc4I	CCNNNNNNNGG	6 cut(s)	61, 212, 400, 904, 1398, 2032
Bse1I	ACTGG	4 cut(s)	1286, 1600, 1917, 2084
Bse21I	CCTNAGG	1 cut(s)	899
Bse3DI	GCAATG	4 cut(s)	1018, 1373, 2050, 2208
BseBI	CCWGG	4 cut(s)	62, 620, 1103, 1579
BseDI	CCNNGG	4 cut(s)	68, 461, 801, 1397
BseGI	GGATG	6 cut(s)	517, 1096, 1109, 1441, 1825, 2088
BseLI	CCNNNNNNNGG	6 cut(s)	61, 212, 400, 904, 1398, 2032
BseMI	GCAATG	4 cut(s)	1018, 1373, 2050, 2208
BseMII	CTCAG	9 cut(s)	12, 254, 321, 426, 555, 762, 1865, 1983, 2136
BseNI	ACTGG	4 cut(s)	1286, 1600, 1917, 2084
BseRI	GAGGAG	5 cut(s)	171, 560, 604, 899, 1473
BseSI	GKGCMC	1 cut(s)	1259
BseXI	GCAGC	8 cut(s)	384, 414, 936, 1508, 1895, 2192, 2195, 2202
BseYI	CCCAGC	1 cut(s)	989
Bsh1236I	CGCG	1 cut(s)	358
BshFI	GGCC	3 cut(s)	1075, 1402, 1852
BshNI	GGYRCC	1 cut(s)	64
BsiHKAI	GWGCWC	1 cut(s)	1125
BsiHKCI	CYCGRG	1 cut(s)	371
BsiSI	CCGG	2 cut(s)	343, 1346
BslFI	GGGAC	2 cut(s)	374, 1007
BslI	CCNNNNNNNGG	6 cut(s)	61, 212, 400, 904, 1398, 2032
BsmAI	GTCTC	6 cut(s)	17, 78, 153, 288, 340, 1694
BsmFI	GGGAC	2 cut(s)	374, 1007
BsmI	GAATGC	2 cut(s)	1320, 1380
BsnI	GGCC	3 cut(s)	1075, 1402, 1852
Bso31I	GGTCTC	2 cut(s)	17, 78
BsoBI	CYCGRG	1 cut(s)	371
Bsp119I	TTCGAA	1 cut(s)	407
Bsp1286I	GDGCHC	3 cut(s)	1125, 1259, 1534
Bsp143I	GATC	6 cut(s)	131, 288, 379, 1190, 1664, 2194
Bsp1720I	GCTNAGC	2 cut(s)	435, 564
BspACI	CCGC	7 cut(s)	203, 358, 732, 1188, 1454, 1463, 1469
BspANI	GGCC	3 cut(s)	1075, 1402, 1852
BspCNI	CTCAG	9 cut(s)	13, 253, 320, 427, 556, 763, 1866, 1984, 2135
BspFNI	CGCG	1 cut(s)	358
BspHI	TCATGA	1 cut(s)	1563
BspLI	GGNNCC	4 cut(s)	66, 392, 1192, 1426
BspMAI	CTGCAG	4 cut(s)	402, 432, 954, 1516
BspMI	ACCTGC	1 cut(s)	402
BspOI	GCTAGC	2 cut(s)	893, 2135
BspPI	GGATC	4 cut(s)	139, 1185, 1198, 2189
BspQI	GCTCTTC	1 cut(s)	1203
BspT104I	TTCGAA	1 cut(s)	407
BspT107I	GGYRCC	1 cut(s)	64
BspTNI	GGTCTC	2 cut(s)	17, 78
BsrDI	GCAATG	4 cut(s)	1018, 1373, 2050, 2208
BsrI	ACTGG	4 cut(s)	1286, 1600, 1917, 2084
BssECI	CCNNGG	4 cut(s)	68, 461, 801, 1397
BssMI	GATC	6 cut(s)	131, 288, 379, 1190, 1664, 2194
BssNI	GRCGYC	1 cut(s)	806
BssSI	CACGAG	1 cut(s)	270
BssT1I	CCWWGG	2 cut(s)	68, 1397
Bst2BI	CACGAG	1 cut(s)	270
Bst2UI	CCWGG	4 cut(s)	62, 620, 1103, 1579
Bst4CI	ACNGT	4 cut(s)	351, 1522, 2011, 2172
Bst6I	CTCTTC	7 cut(s)	3, 537, 591, 602, 1034, 1203, 2144
BstACI	GRCGYC	1 cut(s)	806
BstBI	TTCGAA	1 cut(s)	407
BstC8I	GCNNGC	5 cut(s)	432, 891, 1680, 2133, 2286
BstENI	CCTNNNNNAGG	1 cut(s)	398
BstF5I	GGATG	6 cut(s)	517, 1096, 1109, 1441, 1825, 2088
BstFNI	CGCG	1 cut(s)	358
BstHHI	GCGC	2 cut(s)	1380, 1969
BstKTI	GATC	6 cut(s)	134, 291, 382, 1193, 1667, 2197
BstMAI	GTCTC	6 cut(s)	17, 78, 153, 288, 340, 1694
BstMBI	GATC	6 cut(s)	131, 288, 379, 1190, 1664, 2194
BstMWI	GCNNNNNNNGC	8 cut(s)	436, 560, 740, 749, 758, 1462, 1688, 2103
BstNI	CCWGG	4 cut(s)	62, 620, 1103, 1579
BstNSI	RCATGY	1 cut(s)	2288
BstSCI	CCNGG	4 cut(s)	60, 618, 1101, 1577
BstSFI	CTRYAG	7 cut(s)	398, 428, 695, 950, 1512, 1894, 2168
BstSLI	GKGCMC	1 cut(s)	1259
BstUI	CGCG	1 cut(s)	358
BstV1I	GCAGC	8 cut(s)	384, 414, 936, 1508, 1895, 2192, 2195, 2202
BstV2I	GAAGAC	6 cut(s)	173, 345, 621, 685, 1180, 1920
BstX2I	RGATCY	3 cut(s)	131, 1190, 2194
BstXI	CCANNNNNNTGG	2 cut(s)	626, 2079
BstYI	RGATCY	3 cut(s)	131, 1190, 2194
Bsu36I	CCTNAGG	1 cut(s)	899
BsuRI	GGCC	3 cut(s)	1075, 1402, 1852
BtsCI	GGATG	6 cut(s)	517, 1096, 1109, 1441, 1825, 2088
BtsI	GCAGTG	1 cut(s)	192
BtsIMutI	CAGTG	4 cut(s)	192, 1293, 1724, 1871
BveI	ACCTGC	1 cut(s)	402
Cac8I	GCNNGC	5 cut(s)	432, 891, 1680, 2133, 2286
CciI	TCATGA	1 cut(s)	1563
CfoI	GCGC	2 cut(s)	1380, 1969
Cfr13I	GGNCC	1 cut(s)	1915
CseI	GACGC	3 cut(s)	630, 795, 2036
Csp6I	GTAC	2 cut(s)	331, 2007
CviAII	CATG	6 cut(s)	126, 1328, 1407, 1564, 1956, 2285
CviQI	GTAC	2 cut(s)	331, 2007
DpnI	GATC	6 cut(s)	133, 290, 381, 1192, 1666, 2196
DpnII	GATC	6 cut(s)	131, 288, 379, 1190, 1664, 2194
EaeI	YGGCCR	1 cut(s)	1850
Eam1104I	CTCTTC	7 cut(s)	3, 537, 591, 602, 1034, 1203, 2144
EarI	CTCTTC	7 cut(s)	3, 537, 591, 602, 1034, 1203, 2144
EciI	GGCGGA	1 cut(s)	1458
Ecl136II	GAGCTC	1 cut(s)	1123
Eco130I	CCWWGG	2 cut(s)	68, 1397
Eco147I	AGGCCT	1 cut(s)	1402
Eco24I	GRGCYC	2 cut(s)	1125, 1534
Eco31I	GGTCTC	2 cut(s)	17, 78
Eco47I	GGWCC	1 cut(s)	1915
Eco53kI	GAGCTC	1 cut(s)	1123
Eco57I	CTGAAG	4 cut(s)	131, 686, 2204, 2224
Eco81I	CCTNAGG	1 cut(s)	899
Eco88I	CYCGRG	1 cut(s)	371
EcoICRI	GAGCTC	1 cut(s)	1123
EcoNI	CCTNNNNNAGG	1 cut(s)	398
EcoRI	GAATTC	2 cut(s)	1025, 2244
EcoRII	CCWGG	4 cut(s)	60, 618, 1101, 1577
EcoT14I	CCWWGG	2 cut(s)	68, 1397
EcoT22I	ATGCAT	2 cut(s)	2286, 2290
EcoT38I	GRGCYC	2 cut(s)	1125, 1534
ErhI	CCWWGG	2 cut(s)	68, 1397
FaeI	CATG	6 cut(s)	129, 1331, 1410, 1567, 1959, 2288
FaqI	GGGAC	2 cut(s)	374, 1007
FatI	CATG	6 cut(s)	125, 1327, 1406, 1563, 1955, 2284
FauI	CCCGC	1 cut(s)	351
FbaI	TGATCA	1 cut(s)	379
FokI	GGATG	6 cut(s)	524, 1096, 1103, 1448, 1832, 2095
FriOI	GRGCYC	2 cut(s)	1125, 1534
FspBI	CTAG	8 cut(s)	555, 560, 890, 1167, 1224, 1398, 1419, 2132
FspI	TGCGCA	1 cut(s)	1379
GlaI	GCGC	2 cut(s)	1379, 1968
GsaI	CCCAGC	1 cut(s)	993
GsuI	CTGGAG	4 cut(s)	497, 509, 741, 1617
HaeIII	GGCC	3 cut(s)	1075, 1402, 1852
HapII	CCGG	2 cut(s)	343, 1346
HgaI	GACGC	3 cut(s)	630, 795, 2036
HhaI	GCGC	2 cut(s)	1380, 1969
Hin1I	GRCGYC	1 cut(s)	806
Hin1II	CATG	6 cut(s)	129, 1331, 1410, 1567, 1959, 2288
Hin6I	GCGC	2 cut(s)	1378, 1967
HinP1I	GCGC	2 cut(s)	1378, 1967
HincII	GTYRAC	1 cut(s)	313
HindII	GTYRAC	1 cut(s)	313
HpaII	CCGG	2 cut(s)	343, 1346
HphI	GGTGA	1 cut(s)	1750
Hpy166II	GTNNAC	4 cut(s)	313, 725, 1741, 2014
Hpy188III	TCNNGA	6 cut(s)	270, 371, 645, 1030, 1564, 1972
Hpy8I	GTNNAC	4 cut(s)	313, 725, 1741, 2014
HpyAV	CCTTC	8 cut(s)	544, 777, 1148, 1227, 1267, 1413, 1576, 2248
HpyCH4III	ACNGT	4 cut(s)	351, 1522, 2011, 2172
HpyF10VI	GCNNNNNNNGC	8 cut(s)	436, 560, 740, 749, 758, 1462, 1688, 2103
Hsp92I	GRCGYC	1 cut(s)	806
Hsp92II	CATG	6 cut(s)	129, 1331, 1410, 1567, 1959, 2288
HspAI	GCGC	2 cut(s)	1378, 1967
Ksp22I	TGATCA	1 cut(s)	379
Kzo9I	GATC	6 cut(s)	131, 288, 379, 1190, 1664, 2194
LguI	GCTCTTC	1 cut(s)	1203
LmnI	GCTCC	7 cut(s)	472, 484, 691, 886, 1008, 1323, 2002
Lsp1109I	GCAGC	8 cut(s)	384, 414, 936, 1508, 1895, 2192, 2195, 2202
LweI	GCATC	4 cut(s)	1600, 2034, 2073, 2260
MaeI	CTAG	8 cut(s)	555, 560, 890, 1167, 1224, 1398, 1419, 2132
MaeIII	GTNAC	4 cut(s)	187, 736, 776, 855
MalI	GATC	6 cut(s)	133, 290, 381, 1192, 1666, 2196
MboI	GATC	6 cut(s)	131, 288, 379, 1190, 1664, 2194
MfeI	CAATTG	1 cut(s)	746
MflI	RGATCY	3 cut(s)	131, 1190, 2194
MhlI	GDGCHC	3 cut(s)	1125, 1259, 1534
MlsI	TGGCCA	1 cut(s)	1852
MluNI	TGGCCA	1 cut(s)	1852
MlyI	GAGTC	6 cut(s)	282, 675, 964, 1448, 1696, 2045
Mox20I	TGGCCA	1 cut(s)	1852
Mph1103I	ATGCAT	2 cut(s)	2286, 2290
MscI	TGGCCA	1 cut(s)	1852
MseI	TTAA	5 cut(s)	209, 815, 920, 2102, 2322
MslI	CAYNNNNRTG	1 cut(s)	825
Msp20I	TGGCCA	1 cut(s)	1852
MspA1I	CMGCKG	4 cut(s)	427, 734, 989, 1188
MspI	CCGG	2 cut(s)	343, 1346
MspR9I	CCNGG	4 cut(s)	62, 620, 1103, 1579
MunI	CAATTG	1 cut(s)	746
Mva1269I	GAATGC	2 cut(s)	1320, 1380
MvaI	CCWGG	4 cut(s)	62, 620, 1103, 1579
MvnI	CGCG	1 cut(s)	358
MwoI	GCNNNNNNNGC	8 cut(s)	436, 560, 740, 749, 758, 1462, 1688, 2103
NdeII	GATC	6 cut(s)	131, 288, 379, 1190, 1664, 2194
NheI	GCTAGC	2 cut(s)	889, 2131
NlaIII	CATG	6 cut(s)	129, 1331, 1410, 1567, 1959, 2288
NlaIV	GGNNCC	4 cut(s)	66, 392, 1192, 1426
NmeAIII	GCCGAG	1 cut(s)	826
NmuCI	GTSAC	3 cut(s)	187, 736, 776
NsbI	TGCGCA	1 cut(s)	1379
NsiI	ATGCAT	2 cut(s)	2286, 2290
NspI	RCATGY	1 cut(s)	2288
NspV	TTCGAA	1 cut(s)	407
PaeI	GCATGC	1 cut(s)	2288
PaeR7I	CTCGAG	1 cut(s)	371
PagI	TCATGA	1 cut(s)	1563
PceI	AGGCCT	1 cut(s)	1402
PciSI	GCTCTTC	1 cut(s)	1203
PcsI	WCGNNNNNNNCGW	1 cut(s)	277
PctI	GAATGC	2 cut(s)	1320, 1380
PfeI	GAWTC	7 cut(s)	229, 404, 457, 1106, 1145, 1574, 1586
PfoI	TCCNGGA	1 cut(s)	1577
PleI	GAGTC	6 cut(s)	281, 675, 963, 1447, 1696, 2044
PpsI	GAGTC	6 cut(s)	281, 675, 963, 1447, 1696, 2044
Psp124BI	GAGCTC	1 cut(s)	1125
Psp6I	CCWGG	4 cut(s)	60, 618, 1101, 1577
PspFI	CCCAGC	1 cut(s)	989
PspGI	CCWGG	4 cut(s)	60, 618, 1101, 1577
PspN4I	GGNNCC	4 cut(s)	66, 392, 1192, 1426
PspPI	GGNCC	1 cut(s)	1915
PstI	CTGCAG	4 cut(s)	402, 432, 954, 1516
PsuI	RGATCY	3 cut(s)	131, 1190, 2194
PvuII	CAGCTG	2 cut(s)	427, 989
RsaI	GTAC	2 cut(s)	332, 2008
RsaNI	GTAC	2 cut(s)	331, 2007
RseI	CAYNNNNRTG	1 cut(s)	825
SacI	GAGCTC	1 cut(s)	1125
SapI	GCTCTTC	1 cut(s)	1203
SaqAI	TTAA	5 cut(s)	209, 815, 920, 2102, 2322
Sau3AI	GATC	6 cut(s)	131, 288, 379, 1190, 1664, 2194
Sau96I	GGNCC	1 cut(s)	1915
SchI	GAGTC	6 cut(s)	282, 675, 964, 1448, 1696, 2045
ScrFI	CCNGG	4 cut(s)	62, 620, 1103, 1579
SduI	GDGCHC	3 cut(s)	1125, 1259, 1534
SfaNI	GCATC	4 cut(s)	1600, 2034, 2073, 2260
SfcI	CTRYAG	7 cut(s)	398, 428, 695, 950, 1512, 1894, 2168
Sfr274I	CTCGAG	1 cut(s)	371
SfuI	TTCGAA	1 cut(s)	407
SinI	GGWCC	1 cut(s)	1915
SlaI	CTCGAG	1 cut(s)	371
SmiMI	CAYNNNNRTG	1 cut(s)	825
SmlI	CTYRAG	4 cut(s)	371, 385, 1704, 1970
SmoI	CTYRAG	4 cut(s)	371, 385, 1704, 1970
SphI	GCATGC	1 cut(s)	2288
SseBI	AGGCCT	1 cut(s)	1402
SsiI	CCGC	7 cut(s)	203, 358, 732, 1188, 1454, 1463, 1469
SspMI	CTAG	8 cut(s)	555, 560, 890, 1167, 1224, 1398, 1419, 2132
SstI	GAGCTC	1 cut(s)	1125
StuI	AGGCCT	1 cut(s)	1402
StyD4I	CCNGG	4 cut(s)	60, 618, 1101, 1577
StyI	CCWWGG	2 cut(s)	68, 1397
TaaI	ACNGT	4 cut(s)	351, 1522, 2011, 2172
TaqI	TCGA	8 cut(s)	227, 372, 407, 578, 965, 1001, 1794, 1948
TauI	GCSGC	2 cut(s)	205, 1456
TfiI	GAWTC	7 cut(s)	229, 404, 457, 1106, 1145, 1574, 1586
Tru1I	TTAA	5 cut(s)	209, 815, 920, 2102, 2322
Tru9I	TTAA	5 cut(s)	209, 815, 920, 2102, 2322
TscAI	CASTG	4 cut(s)	192, 1293, 1731, 1878
TseFI	GTSAC	3 cut(s)	187, 736, 776
TseI	GCWGC	8 cut(s)	397, 427, 949, 1496, 1883, 2180, 2183, 2215
Tsp45I	GTSAC	3 cut(s)	187, 736, 776
TspRI	CASTG	4 cut(s)	192, 1293, 1731, 1878
VpaK11BI	GGWCC	1 cut(s)	1915
XagI	CCTNNNNNAGG	1 cut(s)	398
XapI	RAATTY	9 cut(s)	961, 1025, 1048, 1341, 1602, 1712, 1720, 2114, 2244
XceI	RCATGY	1 cut(s)	2288
XhoI	CTCGAG	1 cut(s)	371
XmaJI	CCTAGG	1 cut(s)	1397
XspI	CTAG	8 cut(s)	555, 560, 890, 1167, 1224, 1398, 1419, 2132
Zsp2I	ATGCAT	2 cut(s)	2286, 2290

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.