Protein CHUP1, chloroplastic-like
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g11100 FvH4_3g11100 FvH4_3g11100 FvH4_3g11100 |
| malus_domestica | MD05G1264200.v1.1 MD10G1242300.v1.1 |
| prunus_persica | Prupe.4G101400_v2.0.a1 Prupe.4G101400_v2.0.a1 Prupe.4G101400_v2.0.a1 |
| pyrus_communis | pycom05g24830 pycom05g24840 pycom10g20290 |
| rosa_chinensis | RchiOBHm_Chr5g0017991 |
| rosa_laevigata | RLG00000032329 |
| rosa_multiflora | Rmu_sc0010280.1_g000003 Rmu_sc0011118.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00059610 |
| rosa_rugosa | Rorug05G0039500 |
| rosa_samantha | Rh5AG132400 Rh5BG130500 Rh5CG142900 Rh5DG132500 |
| rosa_wichuraiana | Rw5G011530 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 1430 |
| Acc36I | ACCTGC | 1 cut(s) | 411 |
| AccB1I | GGYRCC | 1 cut(s) | 64 |
| AccII | CGCG | 1 cut(s) | 367 |
| AclI | AACGTT | 1 cut(s) | 1680 |
| AclWI | GGATC | 3 cut(s) | 139, 1236, 1249 |
| AcoI | YGGCCR | 1 cut(s) | 1901 |
| AcsI | RAATTY | 7 cut(s) | 1012, 1099, 1392, 1653, 1763, 1771, 2295 |
| AcuI | CTGAAG | 5 cut(s) | 392, 692, 1976, 2255, 2275 |
| AcyI | GRCGYC | 2 cut(s) | 647, 857 |
| AfaI | GTAC | 4 cut(s) | 341, 1070, 1561, 2059 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 61, 212, 409, 634, 955, 1449, 2083, 2254 |
| AhlI | ACTAGT | 1 cut(s) | 1556 |
| AjnI | CCWGG | 2 cut(s) | 60, 1628 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 795, 827, 1923, 1955 |
| Alw21I | GWGCWC | 1 cut(s) | 450 |
| Alw26I | GTCTC | 4 cut(s) | 153, 285, 349, 1745 |
| AlwI | GGATC | 3 cut(s) | 139, 1236, 1249 |
| Ama87I | CYCGRG | 1 cut(s) | 380 |
| AoxI | GGCC | 4 cut(s) | 71, 1124, 1451, 1901 |
| ApeKI | GCWGC | 3 cut(s) | 1000, 1934, 2266 |
| ApoI | RAATTY | 7 cut(s) | 1012, 1099, 1392, 1653, 1763, 1771, 2295 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 98, 130, 1866, 1898 |
| AspA2I | CCTAGG | 1 cut(s) | 1448 |
| AspLEI | GCGC | 1 cut(s) | 1431 |
| AspS9I | GGNCC | 1 cut(s) | 1966 |
| AsuHPI | GGTGA | 3 cut(s) | 320, 383, 1801 |
| AsuII | TTCGAA | 1 cut(s) | 416 |
| AsuNHI | GCTAGC | 2 cut(s) | 940, 2182 |
| AvaI | CYCGRG | 1 cut(s) | 380 |
| AvaII | GGWCC | 1 cut(s) | 1966 |
| AvrII | CCTAGG | 1 cut(s) | 1448 |
| AxyI | CCTNAGG | 2 cut(s) | 395, 950 |
| BalI | TGGCCA | 1 cut(s) | 1903 |
| BamHI | GGATCC | 1 cut(s) | 1241 |
| BanI | GGYRCC | 1 cut(s) | 64 |
| BanII | GRGCYC | 2 cut(s) | 450, 1585 |
| BbsI | GAAGAC | 5 cut(s) | 173, 242, 630, 1231, 1971 |
| Bbv12I | GWGCWC | 1 cut(s) | 450 |
| BbvI | GCAGC | 3 cut(s) | 987, 1946, 2253 |
| BccI | CCATC | 5 cut(s) | 25, 515, 658, 1289, 2373 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 432, 466 |
| BciT130I | CCWGG | 2 cut(s) | 62, 1630 |
| BclI | TGATCA | 1 cut(s) | 388 |
| BcoDI | GTCTC | 4 cut(s) | 153, 285, 349, 1745 |
| BcuI | ACTAGT | 1 cut(s) | 1556 |
| BfaI | CTAG | 9 cut(s) | 485, 569, 764, 941, 1218, 1449, 1470, 1557, 2183 |
| BfmI | CTRYAG | 4 cut(s) | 701, 1563, 1945, 2219 |
| BfuAI | ACCTGC | 1 cut(s) | 411 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 755 |
| BglII | AGATCT | 1 cut(s) | 1951 |
| BisI | GCNGC | 7 cut(s) | 203, 206, 1001, 1514, 1935, 2232, 2267 |
| BlnI | CCTAGG | 1 cut(s) | 1448 |
| BlpI | GCTNAGC | 1 cut(s) | 573 |
| BlsI | GCNGC | 7 cut(s) | 204, 207, 1002, 1515, 1936, 2233, 2268 |
| BmcAI | AGTACT | 2 cut(s) | 1070, 1561 |
| Bme1390I | CCNGG | 2 cut(s) | 62, 1630 |
| Bme18I | GGWCC | 1 cut(s) | 1966 |
| BmeT110I | CYCGRG | 1 cut(s) | 380 |
| BmgT120I | GGNCC | 1 cut(s) | 1966 |
| BmiI | GGNNCC | 4 cut(s) | 66, 401, 1243, 1477 |
| BmrFI | CCNGG | 2 cut(s) | 62, 1630 |
| BmsI | GCATC | 5 cut(s) | 593, 1651, 2085, 2124, 2311 |
| BmtI | GCTAGC | 2 cut(s) | 944, 2186 |
| BoxI | GACNNNNGTC | 1 cut(s) | 361 |
| BpiI | GAAGAC | 5 cut(s) | 173, 242, 630, 1231, 1971 |
| BpmI | CTGGAG | 2 cut(s) | 518, 1668 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1134 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 573 |
| Bpu14I | TTCGAA | 1 cut(s) | 416 |
| BpuEI | CTTGAG | 2 cut(s) | 1740, 2006 |
| BsaHI | GRCGYC | 2 cut(s) | 647, 857 |
| BsaJI | CCNNGG | 5 cut(s) | 68, 171, 470, 852, 1448 |
| BsaWI | WCCGGW | 1 cut(s) | 351 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 83, 113, 1752, 1782 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 61, 212, 409, 634, 955, 1449, 2083, 2254 |
| Bse1I | ACTGG | 4 cut(s) | 1337, 1651, 1968, 2135 |
| Bse21I | CCTNAGG | 2 cut(s) | 395, 950 |
| Bse3DI | GCAATG | 3 cut(s) | 1069, 1424, 2259 |
| BseBI | CCWGG | 2 cut(s) | 62, 1630 |
| BseDI | CCNNGG | 5 cut(s) | 68, 171, 470, 852, 1448 |
| BseGI | GGATG | 3 cut(s) | 1160, 1492, 2139 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 61, 212, 409, 634, 955, 1449, 2083, 2254 |
| BseMI | GCAATG | 3 cut(s) | 1069, 1424, 2259 |
| BseMII | CTCAG | 7 cut(s) | 318, 347, 386, 564, 768, 2034, 2187 |
| BseNI | ACTGG | 4 cut(s) | 1337, 1651, 1968, 2135 |
| BseRI | GAGGAG | 7 cut(s) | 91, 171, 515, 569, 613, 950, 1524 |
| BseXI | GCAGC | 3 cut(s) | 987, 1946, 2253 |
| Bsh1236I | CGCG | 1 cut(s) | 367 |
| BshFI | GGCC | 4 cut(s) | 73, 1126, 1453, 1903 |
| BshNI | GGYRCC | 1 cut(s) | 64 |
| BsiHKAI | GWGCWC | 1 cut(s) | 450 |
| BsiHKCI | CYCGRG | 1 cut(s) | 380 |
| BsiSI | CCGG | 2 cut(s) | 352, 1397 |
| BslFI | GGGAC | 3 cut(s) | 383, 1293, 2099 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 61, 212, 409, 634, 955, 1449, 2083, 2254 |
| BsmAI | GTCTC | 4 cut(s) | 153, 285, 349, 1745 |
| BsmFI | GGGAC | 3 cut(s) | 383, 1293, 2099 |
| BsmI | GAATGC | 1 cut(s) | 1431 |
| BsnI | GGCC | 4 cut(s) | 73, 1126, 1453, 1903 |
| BsoBI | CYCGRG | 1 cut(s) | 380 |
| Bsp119I | TTCGAA | 1 cut(s) | 416 |
| Bsp1286I | GDGCHC | 2 cut(s) | 450, 1585 |
| Bsp143I | GATC | 7 cut(s) | 131, 285, 388, 1021, 1241, 1715, 1951 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 573 |
| BspANI | GGCC | 4 cut(s) | 73, 1126, 1453, 1903 |
| BspCNI | CTCAG | 7 cut(s) | 317, 346, 387, 565, 769, 2035, 2186 |
| BspFNI | CGCG | 1 cut(s) | 367 |
| BspHI | TCATGA | 1 cut(s) | 1614 |
| BspLI | GGNNCC | 4 cut(s) | 66, 401, 1243, 1477 |
| BspMAI | CTGCAG | 1 cut(s) | 1567 |
| BspMI | ACCTGC | 1 cut(s) | 411 |
| BspOI | GCTAGC | 2 cut(s) | 944, 2186 |
| BspPI | GGATC | 3 cut(s) | 139, 1236, 1249 |
| BspQI | GCTCTTC | 1 cut(s) | 28 |
| BspT104I | TTCGAA | 1 cut(s) | 416 |
| BspT107I | GGYRCC | 1 cut(s) | 64 |
| BsrDI | GCAATG | 3 cut(s) | 1069, 1424, 2259 |
| BsrI | ACTGG | 4 cut(s) | 1337, 1651, 1968, 2135 |
| BssECI | CCNNGG | 5 cut(s) | 68, 171, 470, 852, 1448 |
| BssMI | GATC | 7 cut(s) | 131, 285, 388, 1021, 1241, 1715, 1951 |
| BssNI | GRCGYC | 2 cut(s) | 647, 857 |
| BssT1I | CCWWGG | 3 cut(s) | 68, 171, 1448 |
| Bst2UI | CCWGG | 2 cut(s) | 62, 1630 |
| Bst4CI | ACNGT | 5 cut(s) | 360, 1573, 1796, 2062, 2223 |
| Bst6I | CTCTTC | 9 cut(s) | 3, 28, 546, 600, 611, 707, 1085, 1254, 2195 |
| BstACI | GRCGYC | 2 cut(s) | 647, 857 |
| BstBI | TTCGAA | 1 cut(s) | 416 |
| BstC8I | GCNNGC | 5 cut(s) | 441, 942, 1731, 2184, 2337 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 407 |
| BstF5I | GGATG | 3 cut(s) | 1160, 1492, 2139 |
| BstFNI | CGCG | 1 cut(s) | 367 |
| BstHHI | GCGC | 1 cut(s) | 1431 |
| BstKTI | GATC | 7 cut(s) | 134, 288, 391, 1024, 1244, 1718, 1954 |
| BstMAI | GTCTC | 4 cut(s) | 153, 285, 349, 1745 |
| BstMBI | GATC | 7 cut(s) | 131, 285, 388, 1021, 1241, 1715, 1951 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 445, 746, 755, 764, 1519, 1739, 2154 |
| BstNI | CCWGG | 2 cut(s) | 62, 1630 |
| BstNSI | RCATGY | 1 cut(s) | 2339 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 361 |
| BstSCI | CCNGG | 2 cut(s) | 60, 1628 |
| BstSFI | CTRYAG | 4 cut(s) | 701, 1563, 1945, 2219 |
| BstUI | CGCG | 1 cut(s) | 367 |
| BstV1I | GCAGC | 3 cut(s) | 987, 1946, 2253 |
| BstV2I | GAAGAC | 5 cut(s) | 173, 242, 630, 1231, 1971 |
| BstX2I | RGATCY | 3 cut(s) | 131, 1241, 1951 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2130 |
| BstYI | RGATCY | 3 cut(s) | 131, 1241, 1951 |
| Bsu36I | CCTNAGG | 2 cut(s) | 395, 950 |
| BsuRI | GGCC | 4 cut(s) | 73, 1126, 1453, 1903 |
| BtsCI | GGATG | 3 cut(s) | 1160, 1492, 2139 |
| BtsI | GCAGTG | 2 cut(s) | 1554, 1922 |
| BtsIMutI | CAGTG | 5 cut(s) | 1344, 1554, 1775, 1801, 1922 |
| BveI | ACCTGC | 1 cut(s) | 411 |
| Cac8I | GCNNGC | 5 cut(s) | 441, 942, 1731, 2184, 2337 |
| CciI | TCATGA | 1 cut(s) | 1614 |
| CfoI | GCGC | 1 cut(s) | 1431 |
| Cfr13I | GGNCC | 1 cut(s) | 1966 |
| CseI | GACGC | 3 cut(s) | 636, 846, 2087 |
| Csp6I | GTAC | 4 cut(s) | 340, 1069, 1560, 2058 |
| CviAII | CATG | 5 cut(s) | 126, 1153, 1379, 1615, 2336 |
| CviQI | GTAC | 4 cut(s) | 340, 1069, 1560, 2058 |
| DpnI | GATC | 7 cut(s) | 133, 287, 390, 1023, 1243, 1717, 1953 |
| DpnII | GATC | 7 cut(s) | 131, 285, 388, 1021, 1241, 1715, 1951 |
| EaeI | YGGCCR | 1 cut(s) | 1901 |
| Eam1104I | CTCTTC | 9 cut(s) | 3, 28, 546, 600, 611, 707, 1085, 1254, 2195 |
| EarI | CTCTTC | 9 cut(s) | 3, 28, 546, 600, 611, 707, 1085, 1254, 2195 |
| EciI | GGCGGA | 1 cut(s) | 1509 |
| Ecl136II | GAGCTC | 1 cut(s) | 448 |
| Eco130I | CCWWGG | 3 cut(s) | 68, 171, 1448 |
| Eco147I | AGGCCT | 2 cut(s) | 73, 1453 |
| Eco24I | GRGCYC | 2 cut(s) | 450, 1585 |
| Eco47I | GGWCC | 1 cut(s) | 1966 |
| Eco53kI | GAGCTC | 1 cut(s) | 448 |
| Eco57I | CTGAAG | 5 cut(s) | 392, 692, 1976, 2255, 2275 |
| Eco81I | CCTNAGG | 2 cut(s) | 395, 950 |
| Eco88I | CYCGRG | 1 cut(s) | 380 |
| EcoICRI | GAGCTC | 1 cut(s) | 448 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 407 |
| EcoRI | GAATTC | 2 cut(s) | 1012, 2295 |
| EcoRII | CCWGG | 2 cut(s) | 60, 1628 |
| EcoT14I | CCWWGG | 3 cut(s) | 68, 171, 1448 |
| EcoT22I | ATGCAT | 2 cut(s) | 2337, 2341 |
| EcoT38I | GRGCYC | 2 cut(s) | 450, 1585 |
| ErhI | CCWWGG | 3 cut(s) | 68, 171, 1448 |
| FaeI | CATG | 5 cut(s) | 129, 1156, 1382, 1618, 2339 |
| FaqI | GGGAC | 3 cut(s) | 383, 1293, 2099 |
| FatI | CATG | 5 cut(s) | 125, 1152, 1378, 1614, 2335 |
| FauI | CCCGC | 2 cut(s) | 360, 1033 |
| FbaI | TGATCA | 1 cut(s) | 388 |
| Fnu4HI | GCNGC | 7 cut(s) | 203, 206, 1001, 1514, 1935, 2232, 2267 |
| FokI | GGATG | 3 cut(s) | 1147, 1499, 2146 |
| FriOI | GRGCYC | 2 cut(s) | 450, 1585 |
| Fsp4HI | GCNGC | 7 cut(s) | 203, 206, 1001, 1514, 1935, 2232, 2267 |
| FspBI | CTAG | 9 cut(s) | 485, 569, 764, 941, 1218, 1449, 1470, 1557, 2183 |
| FspI | TGCGCA | 1 cut(s) | 1430 |
| GlaI | GCGC | 1 cut(s) | 1430 |
| GluI | GCNGC | 7 cut(s) | 203, 206, 1001, 1514, 1935, 2232, 2267 |
| GsuI | CTGGAG | 2 cut(s) | 518, 1668 |
| HaeIII | GGCC | 4 cut(s) | 73, 1126, 1453, 1903 |
| HapII | CCGG | 2 cut(s) | 352, 1397 |
| HgaI | GACGC | 3 cut(s) | 636, 846, 2087 |
| HhaI | GCGC | 1 cut(s) | 1431 |
| Hin1I | GRCGYC | 2 cut(s) | 647, 857 |
| Hin1II | CATG | 5 cut(s) | 129, 1156, 1382, 1618, 2339 |
| Hin6I | GCGC | 1 cut(s) | 1429 |
| HinP1I | GCGC | 1 cut(s) | 1429 |
| HincII | GTYRAC | 1 cut(s) | 310 |
| HindII | GTYRAC | 1 cut(s) | 310 |
| HindIII | AAGCTT | 1 cut(s) | 771 |
| HpaII | CCGG | 2 cut(s) | 352, 1397 |
| HphI | GGTGA | 3 cut(s) | 320, 383, 1801 |
| Hpy166II | GTNNAC | 6 cut(s) | 310, 731, 893, 1792, 1870, 2065 |
| Hpy188III | TCNNGA | 5 cut(s) | 380, 410, 881, 1615, 2023 |
| Hpy8I | GTNNAC | 6 cut(s) | 310, 731, 893, 1792, 1870, 2065 |
| Hpy99I | CGWCG | 1 cut(s) | 367 |
| HpyAV | CCTTC | 7 cut(s) | 553, 896, 1199, 1278, 1464, 1627, 2299 |
| HpyCH4III | ACNGT | 5 cut(s) | 360, 1573, 1796, 2062, 2223 |
| HpyCH4IV | ACGT | 1 cut(s) | 1680 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 445, 746, 755, 764, 1519, 1739, 2154 |
| HpySE526I | ACGT | 1 cut(s) | 1680 |
| Hsp92I | GRCGYC | 2 cut(s) | 647, 857 |
| Hsp92II | CATG | 5 cut(s) | 129, 1156, 1382, 1618, 2339 |
| HspAI | GCGC | 1 cut(s) | 1429 |
| Ksp22I | TGATCA | 1 cut(s) | 388 |
| Kzo9I | GATC | 7 cut(s) | 131, 285, 388, 1021, 1241, 1715, 1951 |
| LguI | GCTCTTC | 1 cut(s) | 28 |
| LmnI | GCTCC | 7 cut(s) | 481, 493, 600, 697, 937, 1059, 2053 |
| Lsp1109I | GCAGC | 3 cut(s) | 987, 1946, 2253 |
| LweI | GCATC | 5 cut(s) | 593, 1651, 2085, 2124, 2311 |
| MaeI | CTAG | 9 cut(s) | 485, 569, 764, 941, 1218, 1449, 1470, 1557, 2183 |
| MaeII | ACGT | 1 cut(s) | 1680 |
| MaeIII | GTNAC | 2 cut(s) | 187, 827 |
| MalI | GATC | 7 cut(s) | 133, 287, 390, 1023, 1243, 1717, 1953 |
| MboI | GATC | 7 cut(s) | 131, 285, 388, 1021, 1241, 1715, 1951 |
| MfeI | CAATTG | 2 cut(s) | 242, 752 |
| MflI | RGATCY | 3 cut(s) | 131, 1241, 1951 |
| MhlI | GDGCHC | 2 cut(s) | 450, 1585 |
| MlsI | TGGCCA | 1 cut(s) | 1903 |
| MluNI | TGGCCA | 1 cut(s) | 1903 |
| MlyI | GAGTC | 3 cut(s) | 1484, 1747, 2081 |
| Mox20I | TGGCCA | 1 cut(s) | 1903 |
| Mph1103I | ATGCAT | 2 cut(s) | 2337, 2341 |
| MscI | TGGCCA | 1 cut(s) | 1903 |
| MseI | TTAA | 5 cut(s) | 689, 866, 971, 2153, 2373 |
| Msp20I | TGGCCA | 1 cut(s) | 1903 |
| MspA1I | CMGCKG | 1 cut(s) | 1040 |
| MspI | CCGG | 2 cut(s) | 352, 1397 |
| MspR9I | CCNGG | 2 cut(s) | 62, 1630 |
| MunI | CAATTG | 2 cut(s) | 242, 752 |
| Mva1269I | GAATGC | 1 cut(s) | 1431 |
| MvaI | CCWGG | 2 cut(s) | 62, 1630 |
| MvnI | CGCG | 1 cut(s) | 367 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 445, 746, 755, 764, 1519, 1739, 2154 |
| NdeII | GATC | 7 cut(s) | 131, 285, 388, 1021, 1241, 1715, 1951 |
| NheI | GCTAGC | 2 cut(s) | 940, 2182 |
| NlaIII | CATG | 5 cut(s) | 129, 1156, 1382, 1618, 2339 |
| NlaIV | GGNNCC | 4 cut(s) | 66, 401, 1243, 1477 |
| NmeAIII | GCCGAG | 1 cut(s) | 877 |
| NmuCI | GTSAC | 1 cut(s) | 827 |
| NsbI | TGCGCA | 1 cut(s) | 1430 |
| NsiI | ATGCAT | 2 cut(s) | 2337, 2341 |
| NspI | RCATGY | 1 cut(s) | 2339 |
| NspV | TTCGAA | 1 cut(s) | 416 |
| PaeI | GCATGC | 1 cut(s) | 2339 |
| PaeR7I | CTCGAG | 1 cut(s) | 380 |
| PagI | TCATGA | 1 cut(s) | 1614 |
| PceI | AGGCCT | 2 cut(s) | 73, 1453 |
| PciSI | GCTCTTC | 1 cut(s) | 28 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 274 |
| PctI | GAATGC | 1 cut(s) | 1431 |
| PfeI | GAWTC | 8 cut(s) | 229, 325, 413, 1157, 1196, 1438, 1625, 1637 |
| PfoI | TCCNGGA | 1 cut(s) | 1628 |
| PkrI | GCNGC | 7 cut(s) | 204, 207, 1002, 1515, 1936, 2233, 2268 |
| PleI | GAGTC | 3 cut(s) | 1484, 1747, 2081 |
| PpsI | GAGTC | 3 cut(s) | 1484, 1747, 2081 |
| PshAI | GACNNNNGTC | 1 cut(s) | 361 |
| Psp124BI | GAGCTC | 1 cut(s) | 450 |
| Psp1406I | AACGTT | 1 cut(s) | 1680 |
| Psp6I | CCWGG | 2 cut(s) | 60, 1628 |
| PspGI | CCWGG | 2 cut(s) | 60, 1628 |
| PspN4I | GGNNCC | 4 cut(s) | 66, 401, 1243, 1477 |
| PspPI | GGNCC | 1 cut(s) | 1966 |
| PstI | CTGCAG | 1 cut(s) | 1567 |
| PsuI | RGATCY | 3 cut(s) | 131, 1241, 1951 |
| RsaI | GTAC | 4 cut(s) | 341, 1070, 1561, 2059 |
| RsaNI | GTAC | 4 cut(s) | 340, 1069, 1560, 2058 |
| SacI | GAGCTC | 1 cut(s) | 450 |
| SapI | GCTCTTC | 1 cut(s) | 28 |
| SaqAI | TTAA | 5 cut(s) | 689, 866, 971, 2153, 2373 |
| SatI | GCNGC | 7 cut(s) | 203, 206, 1001, 1514, 1935, 2232, 2267 |
| Sau3AI | GATC | 7 cut(s) | 131, 285, 388, 1021, 1241, 1715, 1951 |
| Sau96I | GGNCC | 1 cut(s) | 1966 |
| ScaI | AGTACT | 2 cut(s) | 1070, 1561 |
| SchI | GAGTC | 3 cut(s) | 1484, 1747, 2081 |
| ScrFI | CCNGG | 2 cut(s) | 62, 1630 |
| SduI | GDGCHC | 2 cut(s) | 450, 1585 |
| SfaNI | GCATC | 5 cut(s) | 593, 1651, 2085, 2124, 2311 |
| SfcI | CTRYAG | 4 cut(s) | 701, 1563, 1945, 2219 |
| Sfr274I | CTCGAG | 1 cut(s) | 380 |
| SfuI | TTCGAA | 1 cut(s) | 416 |
| SinI | GGWCC | 1 cut(s) | 1966 |
| SlaI | CTCGAG | 1 cut(s) | 380 |
| SmlI | CTYRAG | 3 cut(s) | 380, 1755, 2021 |
| SmoI | CTYRAG | 3 cut(s) | 380, 1755, 2021 |
| SpeI | ACTAGT | 1 cut(s) | 1556 |
| SphI | GCATGC | 1 cut(s) | 2339 |
| SseBI | AGGCCT | 2 cut(s) | 73, 1453 |
| SspI | AATATT | 1 cut(s) | 2071 |
| SspMI | CTAG | 9 cut(s) | 485, 569, 764, 941, 1218, 1449, 1470, 1557, 2183 |
| SstI | GAGCTC | 1 cut(s) | 450 |
| StuI | AGGCCT | 2 cut(s) | 73, 1453 |
| StyD4I | CCNGG | 2 cut(s) | 60, 1628 |
| StyI | CCWWGG | 3 cut(s) | 68, 171, 1448 |
| TaaI | ACNGT | 5 cut(s) | 360, 1573, 1796, 2062, 2223 |
| TaiI | ACGT | 1 cut(s) | 1683 |
| TaqI | TCGA | 6 cut(s) | 381, 416, 1016, 1232, 1845, 1999 |
| TatI | WGTACW | 2 cut(s) | 1068, 1559 |
| TauI | GCSGC | 4 cut(s) | 205, 208, 1516, 2234 |
| TfiI | GAWTC | 8 cut(s) | 229, 325, 413, 1157, 1196, 1438, 1625, 1637 |
| Tru1I | TTAA | 5 cut(s) | 689, 866, 971, 2153, 2373 |
| Tru9I | TTAA | 5 cut(s) | 689, 866, 971, 2153, 2373 |
| TscAI | CASTG | 5 cut(s) | 1344, 1554, 1782, 1801, 1929 |
| TseFI | GTSAC | 1 cut(s) | 827 |
| TseI | GCWGC | 3 cut(s) | 1000, 1934, 2266 |
| Tsp45I | GTSAC | 1 cut(s) | 827 |
| TspDTI | ATGAA | 9 cut(s) | 114, 929, 1218, 1395, 1511, 1631, 1866, 2213, 2288 |
| TspRI | CASTG | 5 cut(s) | 1344, 1554, 1782, 1801, 1929 |
| VpaK11BI | GGWCC | 1 cut(s) | 1966 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 407 |
| XapI | RAATTY | 7 cut(s) | 1012, 1099, 1392, 1653, 1763, 1771, 2295 |
| XceI | RCATGY | 1 cut(s) | 2339 |
| XhoI | CTCGAG | 1 cut(s) | 380 |
| XmaJI | CCTAGG | 1 cut(s) | 1448 |
| XspI | CTAG | 9 cut(s) | 485, 569, 764, 941, 1218, 1449, 1470, 1557, 2183 |
| ZrmI | AGTACT | 2 cut(s) | 1070, 1561 |
| Zsp2I | ATGCAT | 2 cut(s) | 2337, 2341 |