Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0008850

Physical Location & Seq

Genomic Coordinates Forward (+)

13488254 .. 13491915

Gene Structure 3662 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG132400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2010 bp

ATGAGAGAAGAGAACCCATCTGAAACCAGAGCAAGAGCAACCAAGTTTTCTGACCAAAACCAGGCACCAAGGCCTCAAAACCCAAAGGGCAACAGCAACTCCTCAAAGTTGAAGTCTGCTTCTTCTTGGGGATCTCATATAGTCAAAGGGTTTGGAGGAGACAAGAAGACCAAGGTGCTAAACGCAGTTACAAGCAAGAAGCCACCGCTAATGGGTTGCGATTTGGCGAATCCGAAGACCCAATTGCCATTAGCCCCTGCTCACTCACGAGTCAAGCGTTCGCTGATCGGAGACTTATCTTGCTCAGTCAACAATGCTAATCAGATTCACCCTCAGATGTACCAGACCCACCGGAGACAGTCGTCGCGGGACTTGTTTCTCGAGCTTGATCACCTGAGGAACCTGCTCCAGGATTCGAAAGAGAGGGAGTTTCAGTTGCAGGCAGAGCTTTCGGAATGTAGGAGAAATCCGAGGGTTTTGGAGCTAGAGAGGGAGCTGGAGGAGAAAAGGAGAGAGGTTGATGGTGTGATGAGGAAAGTTGAGGTGCTGGAAGAGGAGAAGGCTAGTCTAGCTGAGCAACTAGCATCGATTTCCGAGAGGAGCGAAGAGGTGTTGAAGAGAGAAGACCAAGAATGTGCGGTGGTTTCAGCGTCAGGGAGTGTGGAGATGGAGGTTTTAGAGTTGAGAAGATTAAACAAGGAGCTACAGCTTCAGAAGAGAAACCTTGCTTGTAAACTTTCCGCTTTGACAGCCCAATTGGCTTCTCTAGCAAAAGCTTCTGAGAGTGACATTGTTGAGAAAATCAAAGCCGAGGCGTCTATTTTAAGGCATACAAATCAAGATTTGTGTAAACAAGTTGAAGGCTTACAGATGAATAGGTTGAATGAGGTTGAGGAGCTAGCTTACCTTAGGTGGGTCAATTCGTGCTTAAGAAATGAGTTGCAGAACTCTGATAAGCTGCAAAGCCCGAATTCGATTGATAGGAGTAGTAAATCAGCGGGAGATTTGTCAAGTAGGAGCAATGAGTACTTGGAATACAAGGGCGTGAAGAGATTGAATTTGTTAAAGAAGCTGAAAAAATGGCCTATTGCTAATGAGGATTTGCCTAACATGGAATCATCCCCAGATGAGCTATTGGATAAAAGTTGGGTTGATTCAGATGAAGGAAGAAGTCCAAGAAGAAGACACTCGATAAGCGGATCCAAATGCTTTGCAGAAGAGTTGGTGCTGACTAATAAGAGAAGGCAATCTGATGGTTTTATGTGTCCCCCAGAAATTGAGAAGGATATAGAGCCAGTGGCTTCTCAAAAATATGACTTGGGTATGCTTCAATGTCATGAAATCCATAAAATTCCGGCTTCGTTTGATGTTGAGAAAAGGGCATTGCGCATTCCGAATCCCCCTCCTAGGCCTTCGTGTTCTATTTCTAGTGGAACCAAAGCAGATGACTCTATGAAAGTTCCACCACCACCGCCTCCGCCCCCTCCACCTCCTCCTAAGTTCGCAGTGAGGACTAGTACTGCAGGAACGGTGCAAAGAGCCCCACAAGTAGTTGAGTTTTATCATTCACTCATGAAACGAGATTCCAGGAAGGATTCTTCAACTGGAGGAATTTGTGATGCACCGAATGTTGCCAACGTTCGTAGTAATATGATTGGAGAAATTGAAAACCGATCATCACATTTGCTTGCTATAAAGGCAGATGTTGAGACTCAAGGAGAATTTGTAAATTCACTGATAAGAGAGGTGAACAATGCTGTATATCATAGCATTGAAGATGTTGTGGCTTTTGTGAAGTGGCTCGATGACGAACTTTGCTTTCTTGTGGACGAAAGAGCAGTCCTAAAGCACTTTGATTGGCCAGAAAAGAAAGCAGACACACTGCGAGAAGCAGCATTTGGCTATAGAGATCTGAAGAAACTGGACCTTGAAGTGTCTTCTTTCAAAGATGATACTCGATTGCGCTGTGATATTGCACTGAAGAAAATGGTTGCCTTGTCTGAGAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

669

Amino Acids

75.54

Weight (kDa)

8.24

Isoelectric Point (pI)

65.1

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008850)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g11100 FvH4_3g11100 FvH4_3g11100 FvH4_3g11100
malus_domestica	MD05G1264200.v1.1 MD10G1242300.v1.1
prunus_persica	Prupe.4G101400_v2.0.a1 Prupe.4G101400_v2.0.a1 Prupe.4G101400_v2.0.a1
pyrus_communis	pycom05g24830 pycom05g24840 pycom10g20290
rosa_chinensis	RchiOBHm_Chr5g0017991
rosa_laevigata	RLG00000032329
rosa_multiflora	Rmu_sc0010280.1_g000003 Rmu_sc0011118.1_g000004
rosa_roxburghii	Rroxscaffold_1G00059610
rosa_rugosa	Rorug05G0039500
rosa_samantha	Rh5AG132400 Rh5BG130500 Rh5CG142900 Rh5DG132500
rosa_wichuraiana	Rw5G011530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1388
Acc36I	ACCTGC	1 cut(s)	411
AccB1I	GGYRCC	1 cut(s)	64
AccII	CGCG	1 cut(s)	367
AciI	CCGC	8 cut(s)	206, 367, 638, 741, 998, 1197, 1472, 1478
AclI	AACGTT	1 cut(s)	1638
AclWI	GGATC	3 cut(s)	139, 1194, 1207
AcoI	YGGCCR	1 cut(s)	1859
AcsI	RAATTY	6 cut(s)	970, 1057, 1350, 1611, 1721, 1729
AcuI	CTGAAG	3 cut(s)	695, 1934, 2000
AcyI	GRCGYC	1 cut(s)	815
AfaI	GTAC	3 cut(s)	341, 1028, 1519
AfiI	CCNNNNNNNGG	5 cut(s)	61, 212, 409, 913, 1407
AflII	CTTAAG	1 cut(s)	928
AhlI	ACTAGT	1 cut(s)	1514
AjnI	CCWGG	3 cut(s)	60, 408, 1586
AjuI	GAANNNNNNNTTGG	2 cut(s)	1881, 1913
Alw26I	GTCTC	4 cut(s)	153, 285, 349, 1703
AlwI	GGATC	3 cut(s)	139, 1194, 1207
Ama87I	CYCGRG	1 cut(s)	380
AoxI	GGCC	4 cut(s)	71, 1082, 1409, 1859
ApeKI	GCWGC	2 cut(s)	958, 1892
ApoI	RAATTY	6 cut(s)	970, 1057, 1350, 1611, 1721, 1729
ArsI	GACNNNNNNTTYG	4 cut(s)	98, 130, 1824, 1856
AspA2I	CCTAGG	1 cut(s)	1406
AspLEI	GCGC	2 cut(s)	1389, 1965
AspS9I	GGNCC	1 cut(s)	1924
AsuHPI	GGTGA	3 cut(s)	320, 383, 1759
AsuII	TTCGAA	1 cut(s)	416
AsuNHI	GCTAGC	1 cut(s)	898
AvaI	CYCGRG	1 cut(s)	380
AvaII	GGWCC	1 cut(s)	1924
AvrII	CCTAGG	1 cut(s)	1406
AxyI	CCTNAGG	2 cut(s)	395, 908
BalI	TGGCCA	1 cut(s)	1861
BamHI	GGATCC	1 cut(s)	1199
BanI	GGYRCC	1 cut(s)	64
BanII	GRGCYC	1 cut(s)	1543
BauI	CACGAG	1 cut(s)	267
BbsI	GAAGAC	5 cut(s)	173, 242, 630, 1189, 1929
BbvI	GCAGC	2 cut(s)	945, 1904
BccI	CCATC	4 cut(s)	25, 515, 661, 1247
BcgI	CGANNNNNNTGC	2 cut(s)	432, 466
BciT130I	CCWGG	3 cut(s)	62, 410, 1588
BclI	TGATCA	1 cut(s)	388
BcoDI	GTCTC	4 cut(s)	153, 285, 349, 1703
BcuI	ACTAGT	1 cut(s)	1514
BfaI	CTAG	9 cut(s)	485, 564, 569, 581, 767, 899, 1407, 1428, 1515
BfmI	CTRYAG	3 cut(s)	704, 1521, 1903
BfrI	CTTAAG	1 cut(s)	928
BfuAI	ACCTGC	1 cut(s)	411
BglI	GCCNNNNNGGC	1 cut(s)	758
BglII	AGATCT	1 cut(s)	1909
BisI	GCNGC	2 cut(s)	959, 1893
BlnI	CCTAGG	1 cut(s)	1406
BlpI	GCTNAGC	1 cut(s)	573
BlsI	GCNGC	2 cut(s)	960, 1894
BmcAI	AGTACT	2 cut(s)	1028, 1519
Bme1390I	CCNGG	3 cut(s)	62, 410, 1588
Bme18I	GGWCC	1 cut(s)	1924
BmeT110I	CYCGRG	1 cut(s)	380
BmgT120I	GGNCC	1 cut(s)	1924
BmiI	GGNNCC	4 cut(s)	66, 401, 1201, 1435
BmrFI	CCNGG	3 cut(s)	62, 410, 1588
BmsI	GCATC	2 cut(s)	593, 1609
BmtI	GCTAGC	1 cut(s)	902
BoxI	GACNNNNGTC	1 cut(s)	361
BpiI	GAAGAC	5 cut(s)	173, 242, 630, 1189, 1929
BpmI	CTGGAG	3 cut(s)	392, 518, 1626
Bpu1102I	GCTNAGC	1 cut(s)	573
Bpu14I	TTCGAA	1 cut(s)	416
BpuEI	CTTGAG	1 cut(s)	1698
Bsa29I	ATCGAT	1 cut(s)	587
BsaHI	GRCGYC	1 cut(s)	815
BsaJI	CCNNGG	5 cut(s)	68, 171, 470, 810, 1406
BsaWI	WCCGGW	1 cut(s)	351
BsaXI	ACNNNNNCTCC	6 cut(s)	83, 113, 419, 449, 1710, 1740
Bsc4I	CCNNNNNNNGG	5 cut(s)	61, 212, 409, 913, 1407
Bse1I	ACTGG	3 cut(s)	1295, 1609, 1926
Bse21I	CCTNAGG	2 cut(s)	395, 908
Bse3DI	GCAATG	2 cut(s)	1027, 1382
BseBI	CCWGG	3 cut(s)	62, 410, 1588
BseCI	ATCGAT	1 cut(s)	587
BseDI	CCNNGG	5 cut(s)	68, 171, 470, 810, 1406
BseGI	GGATG	1 cut(s)	1118
BseLI	CCNNNNNNNGG	5 cut(s)	61, 212, 409, 913, 1407
BseMI	GCAATG	2 cut(s)	1027, 1382
BseMII	CTCAG	6 cut(s)	318, 347, 386, 564, 771, 1992
BseNI	ACTGG	3 cut(s)	1295, 1609, 1926
BseRI	GAGGAG	7 cut(s)	91, 171, 515, 569, 613, 908, 1482
BseXI	GCAGC	2 cut(s)	945, 1904
Bsh1236I	CGCG	1 cut(s)	367
BshFI	GGCC	4 cut(s)	73, 1084, 1411, 1861
BshNI	GGYRCC	1 cut(s)	64
BshVI	ATCGAT	1 cut(s)	587
BsiHKCI	CYCGRG	1 cut(s)	380
BsiSI	CCGG	2 cut(s)	352, 1355
BslFI	GGGAC	2 cut(s)	383, 1251
BslI	CCNNNNNNNGG	5 cut(s)	61, 212, 409, 913, 1407
BsmAI	GTCTC	4 cut(s)	153, 285, 349, 1703
BsmFI	GGGAC	2 cut(s)	383, 1251
BsmI	GAATGC	1 cut(s)	1389
BsnI	GGCC	4 cut(s)	73, 1084, 1411, 1861
BsoBI	CYCGRG	1 cut(s)	380
Bsp119I	TTCGAA	1 cut(s)	416
Bsp1286I	GDGCHC	1 cut(s)	1543
Bsp143I	GATC	6 cut(s)	131, 285, 388, 1199, 1673, 1909
Bsp1720I	GCTNAGC	1 cut(s)	573
BspACI	CCGC	8 cut(s)	206, 367, 638, 741, 998, 1197, 1472, 1478
BspANI	GGCC	4 cut(s)	73, 1084, 1411, 1861
BspCNI	CTCAG	6 cut(s)	317, 346, 387, 565, 772, 1993
BspDI	ATCGAT	1 cut(s)	587
BspFNI	CGCG	1 cut(s)	367
BspHI	TCATGA	2 cut(s)	1336, 1572
BspLI	GGNNCC	4 cut(s)	66, 401, 1201, 1435
BspMAI	CTGCAG	1 cut(s)	1525
BspMI	ACCTGC	1 cut(s)	411
BspOI	GCTAGC	1 cut(s)	902
BspPI	GGATC	3 cut(s)	139, 1194, 1207
BspT104I	TTCGAA	1 cut(s)	416
BspT107I	GGYRCC	1 cut(s)	64
BspTI	CTTAAG	1 cut(s)	928
BsrDI	GCAATG	2 cut(s)	1027, 1382
BsrI	ACTGG	3 cut(s)	1295, 1609, 1926
BssECI	CCNNGG	5 cut(s)	68, 171, 470, 810, 1406
BssMI	GATC	6 cut(s)	131, 285, 388, 1199, 1673, 1909
BssNI	GRCGYC	1 cut(s)	815
BssSI	CACGAG	1 cut(s)	267
BssT1I	CCWWGG	3 cut(s)	68, 171, 1406
Bst2BI	CACGAG	1 cut(s)	267
Bst2UI	CCWGG	3 cut(s)	62, 410, 1588
Bst4CI	ACNGT	2 cut(s)	360, 1531
Bst6I	CTCTTC	7 cut(s)	3, 546, 600, 611, 710, 1043, 1212
BstACI	GRCGYC	1 cut(s)	815
BstAFI	CTTAAG	1 cut(s)	928
BstBI	TTCGAA	1 cut(s)	416
BstC8I	GCNNGC	3 cut(s)	441, 900, 1689
BstDEI	CTNAG	8 cut(s)	304, 333, 395, 573, 780, 908, 1497, 2001
BstENI	CCTNNNNNAGG	1 cut(s)	407
BstF5I	GGATG	1 cut(s)	1118
BstFNI	CGCG	1 cut(s)	367
BstHHI	GCGC	2 cut(s)	1389, 1965
BstKTI	GATC	6 cut(s)	134, 288, 391, 1202, 1676, 1912
BstMAI	GTCTC	4 cut(s)	153, 285, 349, 1703
BstMBI	GATC	6 cut(s)	131, 285, 388, 1199, 1673, 1909
BstMWI	GCNNNNNNNGC	6 cut(s)	445, 569, 749, 758, 767, 1697
BstNI	CCWGG	3 cut(s)	62, 410, 1588
BstPAI	GACNNNNGTC	1 cut(s)	361
BstSCI	CCNGG	3 cut(s)	60, 408, 1586
BstSFI	CTRYAG	3 cut(s)	704, 1521, 1903
BstUI	CGCG	1 cut(s)	367
BstV1I	GCAGC	2 cut(s)	945, 1904
BstV2I	GAAGAC	5 cut(s)	173, 242, 630, 1189, 1929
BstX2I	RGATCY	3 cut(s)	131, 1199, 1909
BstYI	RGATCY	3 cut(s)	131, 1199, 1909
Bsu15I	ATCGAT	1 cut(s)	587
Bsu36I	CCTNAGG	2 cut(s)	395, 908
BsuRI	GGCC	4 cut(s)	73, 1084, 1411, 1861
BsuTUI	ATCGAT	1 cut(s)	587
BtsCI	GGATG	1 cut(s)	1118
BtsI	GCAGTG	2 cut(s)	1512, 1880
BtsIMutI	CAGTG	5 cut(s)	1302, 1512, 1733, 1880, 1976
BveI	ACCTGC	1 cut(s)	411
Cac8I	GCNNGC	3 cut(s)	441, 900, 1689
CciI	TCATGA	2 cut(s)	1336, 1572
CfoI	GCGC	2 cut(s)	1389, 1965
Cfr13I	GGNCC	1 cut(s)	1924
ClaI	ATCGAT	1 cut(s)	587
CseI	GACGC	2 cut(s)	639, 804
Csp6I	GTAC	3 cut(s)	340, 1027, 1518
CviAII	CATG	3 cut(s)	1111, 1337, 1573
CviQI	GTAC	3 cut(s)	340, 1027, 1518
DdeI	CTNAG	8 cut(s)	304, 333, 395, 573, 780, 908, 1497, 2001
DpnI	GATC	6 cut(s)	133, 287, 390, 1201, 1675, 1911
DpnII	GATC	6 cut(s)	131, 285, 388, 1199, 1673, 1909
EaeI	YGGCCR	1 cut(s)	1859
Eam1104I	CTCTTC	7 cut(s)	3, 546, 600, 611, 710, 1043, 1212
EarI	CTCTTC	7 cut(s)	3, 546, 600, 611, 710, 1043, 1212
EciI	GGCGGA	1 cut(s)	1467
Eco130I	CCWWGG	3 cut(s)	68, 171, 1406
Eco147I	AGGCCT	2 cut(s)	73, 1411
Eco24I	GRGCYC	1 cut(s)	1543
Eco47I	GGWCC	1 cut(s)	1924
Eco57I	CTGAAG	3 cut(s)	695, 1934, 2000
Eco81I	CCTNAGG	2 cut(s)	395, 908
Eco88I	CYCGRG	1 cut(s)	380
EcoNI	CCTNNNNNAGG	1 cut(s)	407
EcoRI	GAATTC	1 cut(s)	970
EcoRII	CCWGG	3 cut(s)	60, 408, 1586
EcoT14I	CCWWGG	3 cut(s)	68, 171, 1406
EcoT38I	GRGCYC	1 cut(s)	1543
ErhI	CCWWGG	3 cut(s)	68, 171, 1406
FaeI	CATG	3 cut(s)	1114, 1340, 1576
FaqI	GGGAC	2 cut(s)	383, 1251
FatI	CATG	3 cut(s)	1110, 1336, 1572
FauI	CCCGC	2 cut(s)	360, 991
FbaI	TGATCA	1 cut(s)	388
Fnu4HI	GCNGC	2 cut(s)	959, 1893
FokI	GGATG	1 cut(s)	1105
FriOI	GRGCYC	1 cut(s)	1543
Fsp4HI	GCNGC	2 cut(s)	959, 1893
FspBI	CTAG	9 cut(s)	485, 564, 569, 581, 767, 899, 1407, 1428, 1515
FspI	TGCGCA	1 cut(s)	1388
GlaI	GCGC	2 cut(s)	1388, 1964
GluI	GCNGC	2 cut(s)	959, 1893
GsuI	CTGGAG	3 cut(s)	392, 518, 1626
HaeIII	GGCC	4 cut(s)	73, 1084, 1411, 1861
HapII	CCGG	2 cut(s)	352, 1355
HgaI	GACGC	2 cut(s)	639, 804
HhaI	GCGC	2 cut(s)	1389, 1965
Hin1I	GRCGYC	1 cut(s)	815
Hin1II	CATG	3 cut(s)	1114, 1340, 1576
Hin6I	GCGC	2 cut(s)	1387, 1963
HinP1I	GCGC	2 cut(s)	1387, 1963
HincII	GTYRAC	1 cut(s)	310
HindII	GTYRAC	1 cut(s)	310
HindIII	AAGCTT	1 cut(s)	774
HpaII	CCGG	2 cut(s)	352, 1355
HphI	GGTGA	3 cut(s)	320, 383, 1759
Hpy166II	GTNNAC	5 cut(s)	310, 734, 851, 1750, 1828
Hpy188III	TCNNGA	5 cut(s)	267, 380, 839, 1337, 1573
Hpy8I	GTNNAC	5 cut(s)	310, 734, 851, 1750, 1828
Hpy99I	CGWCG	1 cut(s)	367
HpyAV	CCTTC	7 cut(s)	553, 854, 1157, 1236, 1276, 1422, 1585
HpyCH4III	ACNGT	2 cut(s)	360, 1531
HpyCH4IV	ACGT	1 cut(s)	1638
HpyCH4V	TGCA	8 cut(s)	439, 943, 961, 1214, 1523, 1534, 1622, 1976
HpyF10VI	GCNNNNNNNGC	6 cut(s)	445, 569, 749, 758, 767, 1697
HpyF3I	CTNAG	8 cut(s)	304, 333, 395, 573, 780, 908, 1497, 2001
HpySE526I	ACGT	1 cut(s)	1638
Hsp92I	GRCGYC	1 cut(s)	815
Hsp92II	CATG	3 cut(s)	1114, 1340, 1576
HspAI	GCGC	2 cut(s)	1387, 1963
Ksp22I	TGATCA	1 cut(s)	388
Kzo9I	GATC	6 cut(s)	131, 285, 388, 1199, 1673, 1909
LmnI	GCTCC	7 cut(s)	411, 481, 493, 600, 700, 895, 1017
Lsp1109I	GCAGC	2 cut(s)	945, 1904
LweI	GCATC	2 cut(s)	593, 1609
MaeI	CTAG	9 cut(s)	485, 564, 569, 581, 767, 899, 1407, 1428, 1515
MaeII	ACGT	1 cut(s)	1638
MaeIII	GTNAC	2 cut(s)	187, 785
MalI	GATC	6 cut(s)	133, 287, 390, 1201, 1675, 1911
MboI	GATC	6 cut(s)	131, 285, 388, 1199, 1673, 1909
MfeI	CAATTG	2 cut(s)	242, 755
MflI	RGATCY	3 cut(s)	131, 1199, 1909
MhlI	GDGCHC	1 cut(s)	1543
MlsI	TGGCCA	1 cut(s)	1861
MluNI	TGGCCA	1 cut(s)	1861
MlyI	GAGTC	3 cut(s)	279, 1442, 1705
Mox20I	TGGCCA	1 cut(s)	1861
MscI	TGGCCA	1 cut(s)	1861
MseI	TTAA	4 cut(s)	692, 824, 929, 1064
Msp20I	TGGCCA	1 cut(s)	1861
MspA1I	CMGCKG	1 cut(s)	998
MspCI	CTTAAG	1 cut(s)	928
MspI	CCGG	2 cut(s)	352, 1355
MspR9I	CCNGG	3 cut(s)	62, 410, 1588
MunI	CAATTG	2 cut(s)	242, 755
Mva1269I	GAATGC	1 cut(s)	1389
MvaI	CCWGG	3 cut(s)	62, 410, 1588
MvnI	CGCG	1 cut(s)	367
MwoI	GCNNNNNNNGC	6 cut(s)	445, 569, 749, 758, 767, 1697
NdeII	GATC	6 cut(s)	131, 285, 388, 1199, 1673, 1909
NheI	GCTAGC	1 cut(s)	898
NlaIII	CATG	3 cut(s)	1114, 1340, 1576
NlaIV	GGNNCC	4 cut(s)	66, 401, 1201, 1435
NmeAIII	GCCGAG	1 cut(s)	835
NmuCI	GTSAC	1 cut(s)	785
NsbI	TGCGCA	1 cut(s)	1388
NspV	TTCGAA	1 cut(s)	416
PaeR7I	CTCGAG	1 cut(s)	380
PagI	TCATGA	2 cut(s)	1336, 1572
PceI	AGGCCT	2 cut(s)	73, 1411
PcsI	WCGNNNNNNNCGW	1 cut(s)	274
PctI	GAATGC	1 cut(s)	1389
PfeI	GAWTC	8 cut(s)	229, 325, 413, 1115, 1154, 1396, 1583, 1595
PfoI	TCCNGGA	2 cut(s)	408, 1586
PkrI	GCNGC	2 cut(s)	960, 1894
PleI	GAGTC	3 cut(s)	278, 1442, 1705
PpsI	GAGTC	3 cut(s)	278, 1442, 1705
PshAI	GACNNNNGTC	1 cut(s)	361
Psp1406I	AACGTT	1 cut(s)	1638
Psp6I	CCWGG	3 cut(s)	60, 408, 1586
PspGI	CCWGG	3 cut(s)	60, 408, 1586
PspN4I	GGNNCC	4 cut(s)	66, 401, 1201, 1435
PspPI	GGNCC	1 cut(s)	1924
PstI	CTGCAG	1 cut(s)	1525
PsuI	RGATCY	3 cut(s)	131, 1199, 1909
RsaI	GTAC	3 cut(s)	341, 1028, 1519
RsaNI	GTAC	3 cut(s)	340, 1027, 1518
SaqAI	TTAA	4 cut(s)	692, 824, 929, 1064
SatI	GCNGC	2 cut(s)	959, 1893
Sau3AI	GATC	6 cut(s)	131, 285, 388, 1199, 1673, 1909
Sau96I	GGNCC	1 cut(s)	1924
ScaI	AGTACT	2 cut(s)	1028, 1519
SchI	GAGTC	3 cut(s)	279, 1442, 1705
ScrFI	CCNGG	3 cut(s)	62, 410, 1588
SduI	GDGCHC	1 cut(s)	1543
SfaNI	GCATC	2 cut(s)	593, 1609
SfcI	CTRYAG	3 cut(s)	704, 1521, 1903
Sfr274I	CTCGAG	1 cut(s)	380
SfuI	TTCGAA	1 cut(s)	416
SinI	GGWCC	1 cut(s)	1924
SlaI	CTCGAG	1 cut(s)	380
SmlI	CTYRAG	3 cut(s)	380, 928, 1713
SmoI	CTYRAG	3 cut(s)	380, 928, 1713
SpeI	ACTAGT	1 cut(s)	1514
SseBI	AGGCCT	2 cut(s)	73, 1411
SsiI	CCGC	8 cut(s)	206, 367, 638, 741, 998, 1197, 1472, 1478
SspMI	CTAG	9 cut(s)	485, 564, 569, 581, 767, 899, 1407, 1428, 1515
StuI	AGGCCT	2 cut(s)	73, 1411
StyD4I	CCNGG	3 cut(s)	60, 408, 1586
StyI	CCWWGG	3 cut(s)	68, 171, 1406
TaaI	ACNGT	2 cut(s)	360, 1531
TaiI	ACGT	1 cut(s)	1641
TaqI	TCGA	7 cut(s)	381, 416, 587, 974, 1190, 1803, 1957
TatI	WGTACW	2 cut(s)	1026, 1517
TfiI	GAWTC	8 cut(s)	229, 325, 413, 1115, 1154, 1396, 1583, 1595
Tru1I	TTAA	4 cut(s)	692, 824, 929, 1064
Tru9I	TTAA	4 cut(s)	692, 824, 929, 1064
TscAI	CASTG	5 cut(s)	1302, 1512, 1740, 1887, 1983
TseFI	GTSAC	1 cut(s)	785
TseI	GCWGC	2 cut(s)	958, 1892
Tsp45I	GTSAC	1 cut(s)	785
TspDTI	ATGAA	5 cut(s)	887, 1176, 1353, 1469, 1589
TspRI	CASTG	5 cut(s)	1302, 1512, 1740, 1887, 1983
Vha464I	CTTAAG	1 cut(s)	928
VpaK11BI	GGWCC	1 cut(s)	1924
XagI	CCTNNNNNAGG	1 cut(s)	407
XapI	RAATTY	6 cut(s)	970, 1057, 1350, 1611, 1721, 1729
XhoI	CTCGAG	1 cut(s)	380
XmaJI	CCTAGG	1 cut(s)	1406
XspI	CTAG	9 cut(s)	485, 564, 569, 581, 767, 899, 1407, 1428, 1515
ZrmI	AGTACT	2 cut(s)	1028, 1519

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.