Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0008850

Physical Location & Seq

Genomic Coordinates Forward (+)

39943195 .. 39947373

Gene Structure 4179 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1264200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2346 bp

ATGAGAGAAGAGAACCCATCAGAAACCAGAGCAAGATCGATCAAATTTTCCGACCAAAACCAGATTCCGAAATGTTCGAATGTGAAGGGCAGCAGCAATTCTTCGAGGTTGAGGTCTGCTTCCTCATGGGGTTCTCACATTGTGAAAGGGCTTGCTGGGGACAAGAAGGCCAAAGCGCAGCCCACAGTCACCAGCAAGAAACCACCGCTAACGGGGTACGATTTAGCGAACCAGAAGATCCCTTTTGCGCCTGCTCAGCCGCGCGTCAAACGCTCGCTGATTGGCGATTTGGCGTGCTCTGTGAATGCTAATCAGGTTCATCCTCAGATGCATCCGACCCACCGGAGGCAGTCGTCCCGAGATTTGTTTATTGAGCTTGATCACTTGAGGAACTTGCTTCGGGAGTCTAAGGAAAGGGAGTTTCAGTTGCAAGCTGAGTTGTCGGAGTGTAGGCGAAACCCGAGGGTCTTGGAGCTTGAGAGGGAGCTTGAGGTGAAAAGGAGGGAGCTTGATGGTCTGGCTCGGAAAGTTGAGCTGCTGGAAGAAGAAAAAACTAGTCTCTCCGATCAATTGACATCAATTTCGGAGAGGAGTGAAGTGATTTTGAAAAGAGAAGATCATGAAACCTCAGTGGCATCAGCATCGGGGAGTGCGGAAATGGAGGTTTTAGAGTTGAGGCGCCTGAACAAGGAGTTGCAGCTTCAGAAGAGAAATCTTGCTAGCAAATTTTCTTCTGCAACATCCCAGTTGGCTTCTCTGGCAAAGGCTTCTGAGAGTGACATTCTTGAGAAGATTAAAGCTGAGGTGTCTGCGCTAAGACATACAAACGAAGATTTGTGCAAACAAGTTGAAGGTTTACAAATGAGTAGGTTGAATGAGGTTGAGGAGCTGGCATACCTGAGGTGGGTGAATTCATGTTTACGAAATGAGTTGCAGAACTCATCCTCCACCGCAAATTCTGATAACACATTAAGTCCCACTTCGATTGAGAGGAGTAGAAAATCTGATGGAGCACTTTCATTTAGAAGCAGCAAGTACTTAGAATACAGTGGTGGAAAGCGATTGAATCTTATGAAGAAACTAAAGAACTGGCCAATTGCTGACGAGGATTTGCCTAACTTAGAAAGCTCAGACGAGGAAGCAGGAAGTCCGAAAAGAAGACACTCAATAAGTGGATCAAGATTCTTTGCAGAAGACTTGGTGCAGACAAATAAGAGAAGGCAGTCTGATGGTTTTATGTGTGTCCAAGAAATGGAGAAGGATACAAAGACTGTAACCTCTCAAGAATATGATTTGGGAATCCTTCACGGATCACAGTTCTTCGGAAATTGTCACGAAATTAATAAACTTCCATCTTGCTTAGATGTTGAGAAAAGGGCCTTGAGAATTCCCAACCCCCCTCCCAGGCCTTCATGTTCCATTTCTAGTGGAACCAAAGTGGATAGTTCTGCGCAAGTTCCTCCACCACCACCGCTTCCACCACCCCCACCGCCTCCTCCTAAGTTTGCGACGAAGACTAGTCCCACAGGAGTGGTACAAAGAGCCCCACAAGTAGTTGAGTTTTATCATTCACTGATGAAGAGAGATTCTAGGAAAGATTCTTCAAATGGAGGAGTTCCTGATGGTCCAGATGTTGCAAATGTTCGTAGTAGCATGATCGGAGAAATTGAGAATCGATCATCACATTTGCTTGCTATAAAGGCAGATGTGGAGACTCAAGGAGAATTCGTGAATTCGTTGATAAGAGAAGTGAACAATGCAGTTTATCAAAACATTGAAGATGTCGTGGCATTCGTGAAGTGGCTCGATGACGAACTTTCCTTTCTTGTGGATGAGAGGGCAGTCCTAAAGCACTTTGATTGGCCAGAAAAGAAAGCTGACACACTGCGAGAAGCAGCATTCAGCTACAGGGATCTCAAGAAACTAGAGTTTGAAGTGTCTTCTTACAAGGATGATAACAGACTGGCTTGTGACATTGCACTAAAGAAAATGGTTTCCTTGTCTGAGAAGATGGAGCGTACAGTTTATAACCTTTTCCGGACAAGGGAGTCGTTGATGCGTAATTGCAGGGACTTCAAAATCCCCACAGACTGGATGCTTGACAATGGAATTTTAAGCAAGATAAAGTTTGGCTCAGTCAAGTTGGCAAAGATGTACATGACGAGAGTGGCTATGGAACTTCAGTTGAAGGCAGCAGCGGAGAAAGATCCTGCAATGGATTACATGCTGCTTCAGGGAGTGAGATTTGCTTTCAGAGTTCATCAGTTTGCAGGGGGATTCGATGCAGACACAATGCACGCGTTCGAGGAACTTCGCTACCTTGCTCATCTTCTCAACAAAAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

782

Amino Acids

88.34

Weight (kDa)

8.76

Isoelectric Point (pI)

62.02

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008850)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g11100 FvH4_3g11100 FvH4_3g11100 FvH4_3g11100
malus_domestica	MD05G1264200.v1.1 MD10G1242300.v1.1
prunus_persica	Prupe.4G101400_v2.0.a1 Prupe.4G101400_v2.0.a1 Prupe.4G101400_v2.0.a1
pyrus_communis	pycom05g24830 pycom05g24840 pycom10g20290
rosa_chinensis	RchiOBHm_Chr5g0017991
rosa_laevigata	RLG00000032329
rosa_multiflora	Rmu_sc0010280.1_g000003 Rmu_sc0011118.1_g000004
rosa_roxburghii	Rroxscaffold_1G00059610
rosa_rugosa	Rorug05G0039500
rosa_samantha	Rh5AG132400 Rh5BG130500 Rh5CG142900 Rh5DG132500
rosa_wichuraiana	Rw5G011530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2028
AasI	GACNNNNNNGTC	1 cut(s)	2047
Acc16I	TGCGCA	1 cut(s)	1452
AccB1I	GGYRCC	1 cut(s)	678
AccB7I	CCANNNNNTGG	2 cut(s)	1252, 2091
AccII	CGCG	3 cut(s)	262, 264, 2300
AccIII	TCCGGA	1 cut(s)	2037
AciI	CCGC	7 cut(s)	206, 260, 653, 951, 1472, 1490, 2198
AclWI	GGATC	5 cut(s)	232, 1183, 1318, 1920, 2201
AcoI	YGGCCR	2 cut(s)	1091, 1862
AcsI	RAATTY	8 cut(s)	44, 725, 910, 955, 1386, 1724, 1732, 2109
AcuI	CTGAAG	3 cut(s)	686, 2165, 2216
AcyI	GRCGYC	1 cut(s)	679
AdeI	CACNNNGTG	1 cut(s)	142
AfaI	GTAC	5 cut(s)	218, 1037, 1536, 2020, 2156
AfiI	CCNNNNNNNGG	8 cut(s)	212, 345, 688, 904, 1252, 1404, 2044, 2091
AflIII	ACRYGT	1 cut(s)	2298
AgsI	TTSAA	9 cut(s)	607, 851, 874, 1066, 1605, 1778, 1934, 2077, 2188
AhlI	ACTAGT	2 cut(s)	554, 1517
AjnI	CCWGG	1 cut(s)	1403
AjuI	GAANNNNNNNTTGG	2 cut(s)	48, 80
AleI	CACNNNNGTG	1 cut(s)	1529
AloI	GAACNNNNNNTCC	2 cut(s)	929, 961
Alw21I	GWGCWC	2 cut(s)	299, 1015
Alw26I	GTCTC	2 cut(s)	563, 1706
AlwI	GGATC	5 cut(s)	232, 1183, 1318, 1920, 2201
Ama87I	CYCGRG	2 cut(s)	357, 460
Aor13HI	TCCGGA	1 cut(s)	2037
AoxI	GGCC	5 cut(s)	168, 1091, 1377, 1406, 1862
ApoI	RAATTY	8 cut(s)	44, 725, 910, 955, 1386, 1724, 1732, 2109
ArsI	GACNNNNNNTTYG	2 cut(s)	565, 597
AseI	ATTAAT	1 cut(s)	1341
AspLEI	GCGC	6 cut(s)	178, 250, 264, 681, 814, 1453
AspS9I	GGNCC	2 cut(s)	1377, 1625
AsuHPI	GGTGA	3 cut(s)	181, 505, 919
AsuII	TTCGAA	1 cut(s)	77
AsuNHI	GCTAGC	1 cut(s)	719
AvaI	CYCGRG	2 cut(s)	357, 460
AvaII	GGWCC	1 cut(s)	1625
AxyI	CCTNAGG	1 cut(s)	899
BalI	TGGCCA	2 cut(s)	1093, 1864
BanI	GGYRCC	1 cut(s)	678
BanII	GRGCYC	1 cut(s)	1546
BbsI	GAAGAC	4 cut(s)	1165, 1200, 1520, 1932
Bbv12I	GWGCWC	2 cut(s)	299, 1015
BbvCI	CCTCAGC	1 cut(s)	801
BccI	CCATC	7 cut(s)	25, 506, 1001, 1223, 1360, 1616, 2005
BcgI	CGANNNNNNTGC	2 cut(s)	624, 658
BciT130I	CCWGG	1 cut(s)	1405
BciVI	GTATCC	1 cut(s)	1255
BclI	TGATCA	1 cut(s)	379
BcoDI	GTCTC	2 cut(s)	563, 1706
BcuI	ACTAGT	2 cut(s)	554, 1517
BfaI	CTAG	6 cut(s)	555, 720, 1425, 1518, 1590, 1925
BfmI	CTRYAG	1 cut(s)	1906
BfoI	RGCGCY	1 cut(s)	682
BfuI	GTATCC	1 cut(s)	1255
BlpI	GCTNAGC	1 cut(s)	255
BmcAI	AGTACT	1 cut(s)	1037
Bme1390I	CCNGG	1 cut(s)	1405
Bme18I	GGWCC	1 cut(s)	1625
BmeT110I	CYCGRG	2 cut(s)	357, 460
BmgT120I	GGNCC	2 cut(s)	1377, 1625
BmiI	GGNNCC	2 cut(s)	680, 1432
BmrFI	CCNGG	1 cut(s)	1405
BmrI	ACTGGG	1 cut(s)	739
BmsI	GCATC	7 cut(s)	318, 340, 644, 650, 2046, 2085, 2272
BmtI	GCTAGC	1 cut(s)	723
BmuI	ACTGGG	1 cut(s)	739
BpiI	GAAGAC	4 cut(s)	1165, 1200, 1520, 1932
Bpu10I	CCTNAGC	1 cut(s)	801
Bpu1102I	GCTNAGC	1 cut(s)	255
Bpu14I	TTCGAA	1 cut(s)	77
BpuEI	CTTGAG	8 cut(s)	406, 497, 509, 806, 1266, 1402, 1701, 1901
Bsa29I	ATCGAT	2 cut(s)	38, 1675
BsaHI	GRCGYC	1 cut(s)	679
BsaJI	CCNNGG	2 cut(s)	461, 1403
BsaWI	WCCGGW	2 cut(s)	342, 2037
BsaXI	ACNNNNNCTCC	6 cut(s)	410, 440, 929, 959, 1713, 1743
Bsc4I	CCNNNNNNNGG	8 cut(s)	212, 345, 688, 904, 1252, 1404, 2044, 2091
Bse1I	ACTGG	4 cut(s)	745, 1094, 1968, 2096
Bse21I	CCTNAGG	1 cut(s)	899
Bse3DI	GCAATG	2 cut(s)	1974, 2220
BseAI	TCCGGA	1 cut(s)	2037
BseBI	CCWGG	1 cut(s)	1405
BseCI	ATCGAT	2 cut(s)	38, 1675
BseDI	CCNNGG	2 cut(s)	461, 1403
BseGI	GGATG	7 cut(s)	319, 331, 740, 941, 1837, 1957, 2100
BseLI	CCNNNNNNNGG	8 cut(s)	212, 345, 688, 904, 1252, 1404, 2044, 2091
BseMI	GCAATG	2 cut(s)	1974, 2220
BseNI	ACTGG	4 cut(s)	745, 1094, 1968, 2096
BseRI	GAGGAG	5 cut(s)	604, 899, 1006, 1485, 1626
BseYI	CCCAGC	1 cut(s)	155
BsgI	GTGCAG	1 cut(s)	1223
Bsh1236I	CGCG	3 cut(s)	262, 264, 2300
BshFI	GGCC	5 cut(s)	170, 1093, 1379, 1408, 1864
BshNI	GGYRCC	1 cut(s)	678
BshVI	ATCGAT	2 cut(s)	38, 1675
BsiHKAI	GWGCWC	2 cut(s)	299, 1015
BsiHKCI	CYCGRG	2 cut(s)	357, 460
BsiSI	CCGG	2 cut(s)	343, 2038
BslFI	GGGAC	5 cut(s)	173, 340, 960, 1506, 2084
BslI	CCNNNNNNNGG	8 cut(s)	212, 345, 688, 904, 1252, 1404, 2044, 2091
BsmAI	GTCTC	2 cut(s)	563, 1706
BsmFI	GGGAC	5 cut(s)	173, 340, 960, 1506, 2084
BsmI	GAATGC	3 cut(s)	310, 1790, 1898
BsnI	GGCC	5 cut(s)	170, 1093, 1379, 1408, 1864
BsoBI	CYCGRG	2 cut(s)	357, 460
Bsp119I	TTCGAA	1 cut(s)	77
Bsp1286I	GDGCHC	3 cut(s)	299, 1015, 1546
Bsp13I	TCCGGA	1 cut(s)	2037
Bsp1407I	TGTACA	1 cut(s)	2154
Bsp1720I	GCTNAGC	1 cut(s)	255
BspACI	CCGC	7 cut(s)	206, 260, 653, 951, 1472, 1490, 2198
BspANI	GGCC	5 cut(s)	170, 1093, 1379, 1408, 1864
BspDI	ATCGAT	2 cut(s)	38, 1675
BspEI	TCCGGA	1 cut(s)	2037
BspFNI	CGCG	3 cut(s)	262, 264, 2300
BspHI	TCATGA	1 cut(s)	619
BspLI	GGNNCC	2 cut(s)	680, 1432
BspOI	GCTAGC	1 cut(s)	723
BspPI	GGATC	5 cut(s)	232, 1183, 1318, 1920, 2201
BspT104I	TTCGAA	1 cut(s)	77
BspT107I	GGYRCC	1 cut(s)	678
BsrDI	GCAATG	2 cut(s)	1974, 2220
BsrGI	TGTACA	1 cut(s)	2154
BsrI	ACTGG	4 cut(s)	745, 1094, 1968, 2096
BssECI	CCNNGG	2 cut(s)	461, 1403
BssNI	GRCGYC	1 cut(s)	679
Bst2UI	CCWGG	1 cut(s)	1405
Bst4CI	ACNGT	5 cut(s)	187, 1049, 1273, 1317, 2023
Bst6I	CTCTTC	3 cut(s)	3, 701, 1574
BstACI	GRCGYC	1 cut(s)	679
BstAUI	TGTACA	1 cut(s)	2154
BstBI	TTCGAA	1 cut(s)	77
BstC8I	GCNNGC	9 cut(s)	153, 252, 275, 295, 432, 721, 891, 1692, 2298
BstENI	CCTNNNNNAGG	1 cut(s)	686
BstF5I	GGATG	7 cut(s)	319, 331, 740, 941, 1837, 1957, 2100
BstFNI	CGCG	3 cut(s)	262, 264, 2300
BstH2I	RGCGCY	1 cut(s)	682
BstHHI	GCGC	6 cut(s)	178, 250, 264, 681, 814, 1453
BstMAI	GTCTC	2 cut(s)	563, 1706
BstMWI	GCNNNNNNNGC	4 cut(s)	256, 270, 758, 1700
BstNI	CCWGG	1 cut(s)	1405
BstNSI	RCATGY	1 cut(s)	2227
BstSCI	CCNGG	1 cut(s)	1403
BstSFI	CTRYAG	1 cut(s)	1906
BstUI	CGCG	3 cut(s)	262, 264, 2300
BstV2I	GAAGAC	4 cut(s)	1165, 1200, 1520, 1932
BstX2I	RGATCY	3 cut(s)	237, 1912, 2206
BstXI	CCANNNNNNTGG	1 cut(s)	1531
BstYI	RGATCY	3 cut(s)	237, 1912, 2206
Bsu15I	ATCGAT	2 cut(s)	38, 1675
Bsu36I	CCTNAGG	1 cut(s)	899
BsuI	GTATCC	1 cut(s)	1255
BsuRI	GGCC	5 cut(s)	170, 1093, 1379, 1408, 1864
BsuTUI	ATCGAT	2 cut(s)	38, 1675
BtsCI	GGATG	7 cut(s)	319, 331, 740, 941, 1837, 1957, 2100
BtsI	GCAGTG	1 cut(s)	1883
BtsIMutI	CAGTG	4 cut(s)	636, 1054, 1571, 1883
Cac8I	GCNNGC	9 cut(s)	153, 252, 275, 295, 432, 721, 891, 1692, 2298
CciI	TCATGA	1 cut(s)	619
CfoI	GCGC	6 cut(s)	178, 250, 264, 681, 814, 1453
Cfr13I	GGNCC	2 cut(s)	1377, 1625
ClaI	ATCGAT	2 cut(s)	38, 1675
CseI	GACGC	1 cut(s)	253
Csp6I	GTAC	5 cut(s)	217, 1036, 1535, 2019, 2155
CspCI	CAANNNNNGTGG	2 cut(s)	967, 1002
CviAII	CATG	7 cut(s)	126, 620, 915, 1413, 1654, 2158, 2224
CviQI	GTAC	5 cut(s)	217, 1036, 1535, 2019, 2155
DinI	GGCGCC	1 cut(s)	680
DraIII	CACNNNGTG	1 cut(s)	142
DrdI	GACNNNNNNGTC	1 cut(s)	2047
DseDI	GACNNNNNNGTC	1 cut(s)	2047
EaeI	YGGCCR	2 cut(s)	1091, 1862
Eam1104I	CTCTTC	3 cut(s)	3, 701, 1574
EarI	CTCTTC	3 cut(s)	3, 701, 1574
Eco147I	AGGCCT	1 cut(s)	1408
Eco24I	GRGCYC	1 cut(s)	1546
Eco47I	GGWCC	1 cut(s)	1625
Eco57I	CTGAAG	3 cut(s)	686, 2165, 2216
Eco81I	CCTNAGG	1 cut(s)	899
Eco88I	CYCGRG	2 cut(s)	357, 460
EcoNI	CCTNNNNNAGG	1 cut(s)	686
EcoO109I	RGGNCCY	1 cut(s)	1377
EcoRI	GAATTC	4 cut(s)	910, 1386, 1724, 1732
EcoRII	CCWGG	1 cut(s)	1403
EcoT22I	ATGCAT	1 cut(s)	333
EcoT38I	GRGCYC	1 cut(s)	1546
EgeI	GGCGCC	1 cut(s)	680
EheI	GGCGCC	1 cut(s)	680
FaeI	CATG	7 cut(s)	129, 623, 918, 1416, 1657, 2161, 2227
FalI	AAGNNNNNCTT	2 cut(s)	964, 996
FaqI	GGGAC	5 cut(s)	173, 340, 960, 1506, 2084
FatI	CATG	7 cut(s)	125, 619, 914, 1412, 1653, 2157, 2223
FbaI	TGATCA	1 cut(s)	379
FokI	GGATG	7 cut(s)	306, 318, 727, 928, 1844, 1964, 2107
FriOI	GRGCYC	1 cut(s)	1546
FspBI	CTAG	6 cut(s)	555, 720, 1425, 1518, 1590, 1925
FspI	TGCGCA	1 cut(s)	1452
GlaI	GCGC	6 cut(s)	177, 249, 263, 680, 813, 1452
GsaI	CCCAGC	1 cut(s)	159
HaeII	RGCGCY	1 cut(s)	682
HaeIII	GGCC	5 cut(s)	170, 1093, 1379, 1408, 1864
HapII	CCGG	2 cut(s)	343, 2038
HgaI	GACGC	1 cut(s)	253
HhaI	GCGC	6 cut(s)	178, 250, 264, 681, 814, 1453
Hin1I	GRCGYC	1 cut(s)	679
Hin1II	CATG	7 cut(s)	129, 623, 918, 1416, 1657, 2161, 2227
Hin6I	GCGC	6 cut(s)	176, 248, 262, 679, 812, 1451
HinP1I	GCGC	6 cut(s)	176, 248, 262, 679, 812, 1451
HpaII	CCGG	2 cut(s)	343, 2038
HphI	GGTGA	3 cut(s)	181, 505, 919
Hpy166II	GTNNAC	3 cut(s)	857, 920, 1753
Hpy8I	GTNNAC	3 cut(s)	857, 920, 1753
Hpy99I	CGWCG	1 cut(s)	1513
HpyAV	CCTTC	8 cut(s)	79, 160, 845, 1212, 1252, 1313, 1419, 2182
HpyCH4III	ACNGT	5 cut(s)	187, 1049, 1273, 1317, 2023
HpyF10VI	GCNNNNNNNGC	4 cut(s)	256, 270, 758, 1700
Hsp92I	GRCGYC	1 cut(s)	679
Hsp92II	CATG	7 cut(s)	129, 623, 918, 1416, 1657, 2161, 2227
HspAI	GCGC	6 cut(s)	176, 248, 262, 679, 812, 1451
KasI	GGCGCC	1 cut(s)	678
Kpn2I	TCCGGA	1 cut(s)	2037
Ksp22I	TGATCA	1 cut(s)	379
LmnI	GCTCC	6 cut(s)	472, 484, 505, 886, 1010, 2014
LweI	GCATC	7 cut(s)	318, 340, 644, 650, 2046, 2085, 2272
MaeI	CTAG	6 cut(s)	555, 720, 1425, 1518, 1590, 1925
MaeIII	GTNAC	5 cut(s)	187, 776, 1273, 1331, 1970
MfeI	CAATTG	2 cut(s)	569, 1095
MflI	RGATCY	3 cut(s)	237, 1912, 2206
MhlI	GDGCHC	3 cut(s)	299, 1015, 1546
MlsI	TGGCCA	2 cut(s)	1093, 1864
MluI	ACGCGT	1 cut(s)	2298
MluNI	TGGCCA	2 cut(s)	1093, 1864
Mly113I	GGCGCC	1 cut(s)	679
MlyI	GAGTC	3 cut(s)	413, 1708, 2057
MmeI	TCCRAC	3 cut(s)	75, 359, 423
Mox20I	TGGCCA	2 cut(s)	1093, 1864
Mph1103I	ATGCAT	1 cut(s)	333
MroI	TCCGGA	1 cut(s)	2037
MscI	TGGCCA	2 cut(s)	1093, 1864
MseI	TTAA	4 cut(s)	795, 971, 1341, 2114
MslI	CAYNNNNRTG	1 cut(s)	1529
Msp20I	TGGCCA	2 cut(s)	1093, 1864
MspA1I	CMGCKG	1 cut(s)	2198
MspI	CCGG	2 cut(s)	343, 2038
MspR9I	CCNGG	1 cut(s)	1405
MunI	CAATTG	2 cut(s)	569, 1095
Mva1269I	GAATGC	3 cut(s)	310, 1790, 1898
MvaI	CCWGG	1 cut(s)	1405
MvnI	CGCG	3 cut(s)	262, 264, 2300
MwoI	GCNNNNNNNGC	4 cut(s)	256, 270, 758, 1700
NarI	GGCGCC	1 cut(s)	679
NheI	GCTAGC	1 cut(s)	719
NlaIII	CATG	7 cut(s)	129, 623, 918, 1416, 1657, 2161, 2227
NlaIV	GGNNCC	2 cut(s)	680, 1432
NmuCI	GTSAC	4 cut(s)	187, 776, 1331, 1970
NsbI	TGCGCA	1 cut(s)	1452
NsiI	ATGCAT	1 cut(s)	333
NspI	RCATGY	1 cut(s)	2227
NspV	TTCGAA	1 cut(s)	77
OliI	CACNNNNGTG	1 cut(s)	1529
PagI	TCATGA	1 cut(s)	619
PceI	AGGCCT	1 cut(s)	1408
PcsI	WCGNNNNNNNCGW	1 cut(s)	1791
PctI	GAATGC	3 cut(s)	310, 1790, 1898
PfeI	GAWTC	8 cut(s)	64, 1066, 1182, 1299, 1586, 1598, 1672, 2277
PflMI	CCANNNNNTGG	2 cut(s)	1252, 2091
PleI	GAGTC	3 cut(s)	412, 1708, 2056
PluTI	GGCGCC	1 cut(s)	682
PpsI	GAGTC	3 cut(s)	412, 1708, 2056
PshBI	ATTAAT	1 cut(s)	1341
PsiI	TTATAA	1 cut(s)	2028
Psp6I	CCWGG	1 cut(s)	1403
PspFI	CCCAGC	1 cut(s)	155
PspGI	CCWGG	1 cut(s)	1403
PspN4I	GGNNCC	2 cut(s)	680, 1432
PspPI	GGNCC	2 cut(s)	1377, 1625
PsuI	RGATCY	3 cut(s)	237, 1912, 2206
RsaI	GTAC	5 cut(s)	218, 1037, 1536, 2020, 2156
RsaNI	GTAC	5 cut(s)	217, 1036, 1535, 2019, 2155
RseI	CAYNNNNRTG	1 cut(s)	1529
SaqAI	TTAA	4 cut(s)	795, 971, 1341, 2114
Sau96I	GGNCC	2 cut(s)	1377, 1625
ScaI	AGTACT	1 cut(s)	1037
SchI	GAGTC	3 cut(s)	413, 1708, 2057
ScrFI	CCNGG	1 cut(s)	1405
SduI	GDGCHC	3 cut(s)	299, 1015, 1546
SfaNI	GCATC	7 cut(s)	318, 340, 644, 650, 2046, 2085, 2272
SfcI	CTRYAG	1 cut(s)	1906
SfoI	GGCGCC	1 cut(s)	680
SfuI	TTCGAA	1 cut(s)	77
SinI	GGWCC	1 cut(s)	1625
SmiMI	CAYNNNNRTG	1 cut(s)	1529
SmlI	CTYRAG	8 cut(s)	385, 476, 488, 785, 1281, 1381, 1716, 1916
SmoI	CTYRAG	8 cut(s)	385, 476, 488, 785, 1281, 1381, 1716, 1916
SpeI	ACTAGT	2 cut(s)	554, 1517
SseBI	AGGCCT	1 cut(s)	1408
SsiI	CCGC	7 cut(s)	206, 260, 653, 951, 1472, 1490, 2198
SspDI	GGCGCC	1 cut(s)	678
SspMI	CTAG	6 cut(s)	555, 720, 1425, 1518, 1590, 1925
StuI	AGGCCT	1 cut(s)	1408
StyD4I	CCNGG	1 cut(s)	1403
TaaI	ACNGT	5 cut(s)	187, 1049, 1273, 1317, 2023
TaqI	TCGA	8 cut(s)	38, 77, 104, 983, 1675, 1806, 2280, 2304
TatI	WGTACW	2 cut(s)	1035, 2154
TauI	GCSGC	1 cut(s)	262
TfiI	GAWTC	8 cut(s)	64, 1066, 1182, 1299, 1586, 1598, 1672, 2277
Tru1I	TTAA	4 cut(s)	795, 971, 1341, 2114
Tru9I	TTAA	4 cut(s)	795, 971, 1341, 2114
TscAI	CASTG	4 cut(s)	636, 1054, 1578, 1890
TseFI	GTSAC	4 cut(s)	187, 776, 1331, 1970
Tsp45I	GTSAC	4 cut(s)	187, 776, 1331, 1970
TspDTI	ATGAA	8 cut(s)	308, 636, 903, 1008, 1088, 1401, 1592, 2249
TspGWI	ACGGA	1 cut(s)	1323
TspRI	CASTG	4 cut(s)	636, 1054, 1578, 1890
Van91I	CCANNNNNTGG	2 cut(s)	1252, 2091
VpaK11BI	GGWCC	1 cut(s)	1625
VspI	ATTAAT	1 cut(s)	1341
XagI	CCTNNNNNAGG	1 cut(s)	686
XapI	RAATTY	8 cut(s)	44, 725, 910, 955, 1386, 1724, 1732, 2109
XceI	RCATGY	1 cut(s)	2227
XspI	CTAG	6 cut(s)	555, 720, 1425, 1518, 1590, 1925
ZrmI	AGTACT	1 cut(s)	1037
Zsp2I	ATGCAT	1 cut(s)	333

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.