Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0006720

Physical Location & Seq

Genomic Coordinates Reverse (-)

7807267 .. 7813933

Gene Structure 6667 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g13070.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1944 bp

ATGCCAAAATGCCCAACTCACTACTCAAAGCTCCTCACCTCCTCACTCTACCAACGCCTCAAGAATCACACCCTCTTCCCAATTGACCTCAAGTTCTCATCTCTCTCAATCCCATCAGGCAATGAAGAACCAGATCCCCCAATTAGTGAAGAAATCTTCAGGAAAGGTCCCAACTTTGGGGCCTACAAGTCAGGTGATTCAACTTTCTATTCACTCATTGAGAACTATGCGAGTCTTGGGGATTTTGGGTCCTTAGAGAAGGTTCTGGATCGAATGAAACGCGAAAGGAGAGTCTTTGTTGAGGGGAGTTTCATTGCTGTGTTTAGAGCTTTTGGGAAAGCACATTTGCCCAATCAAGCTGTAGACTTGTTTCATAGAATGGTAGATGAGTTTCAGTGTAGGAGGACTGTTAAGTCGTTTAATTCGGTTCTTAATGTTATTGTACAGGAGGGTCATTATGCACATGCATTGGAGTTTTATGACCATGTTGTTGGTGATAGAAGCATGAATATTTCGCCCAATGTGCTTAGTTATAATTTGATTATTAAGGCATTGTGTAGGTTTGGATTGGTTGATAAAGCTGTGGAGAAGTTTCGGGAGATGCCGGTTAGGGACTGTGCTCCTGATGTGTTTACGTATTGTACATTGATGGATGGGTTGTGCAAGGTGAATAGGGTTGACGAGGCGGTGTTTTTGTTGGACGAGATGCAGATTGAGGGCTGCTCCCCAAGTCCTGCGGCGTTCAATGTGTTGATTGATGCAGTGTGCAAGAAGGGTGACTTGGGGCGTGCGGCAAAGCTTGTTGATAATATGTTTCTTAAGGGGTGTGTTCCAAATGAAGTGACTTATAACACACTTATACACGGTTTGTGTCTCCAAGGGAAGTTGGAGAAGGCAATTAGTCTTTTGGATAGAATGGTTTTGAATAAATGTGTGCCCAATGATGTCACCTATGGGACAATCATCAATGGACTTGTTAAGCAAGGGCGGTCTCTTGATGGAGTTCGAGTGCTGATATCTATGGAGGAAAGAGGGCGTCGTGCAAATGAGTATATTTATTCAGTTCTTGTTAGTGGATTGTTCAAGGAGGGAAAATCTGAAGAGGCAATGAAATTGTGGAAGGAGATGATGGAAAAGGGATGTAAACCCAACACTGTGGTGTATAGTGCCCTAATAGATGGTCTTTGTTTAGATGGAAAACCCGATGAAGCTAAGGAAGTATTCTGTGAGATGGTGCGTAATGGTTGCATGCCCAATTCCTATGCTTACAGTTCCTTAATGAGGGGTTTCTTCAGGACAGGTCAGAGTCAGAAAGCGATTCTTTTGTGGAAAGAAATGGCAGCCAATAACGTTGTACGTAATGAGGTTTGTTACAGTGTCATAATTGATGGTTTCTGCAAGGAGGGGAAAGTCAAAGAGGCATTGATGGTGTGGAAGCAGATACTTGCAAGAGGATATAAACTAGATGTCGTGGCTTATAGCTCAATGATCCATGGCCTGTGCAACGATGGTTTGGTTGAGCAGGGTTTGAAACTTTTTAATGACATGCTTTCTCAGGAACCTGAATGTCAGCCTGATGTAATCACTTATAACATACTTTTGAATGCTCTCTGCAAGCAGCATACCATCTCACGTGCCATTGATCTTTTGAACAGTATGCTGGATCATGGTTGTGATCCTGACTTGGTTACTTGTGACATCTTCCTAACAACTTTGGGAGAAAAGCTCGACCCACCTCAAGATGGGAGGGAGTTCCTAAATGAGCTAGTTGTCCGGCTATTTAAACGGCAGAGGACAGTAGGTGCTTTCAGGATTGTTGAAGTGATGCTGAAAAAGTTTTTGCCTCCGACAGCCTGTACCTGGACAACAGTTGTACAAGAGCTTTGCAAGCCTAAGAAGGTTAGAGCAGCTATAGACAAATGTTGGAGCAGCCTATATTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006412 GO:0006518 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009451 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0019538 GO:0022414 GO:0032501 GO:0032502 GO:0032543 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:0140053 GO:1901360 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

648

Amino Acids

72.97

Weight (kDa)

7.87

Isoelectric Point (pI)

35.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_1	PF12854	45 - 76	1.9e-10	PPR repeat
PPR_2	PF13041	48 - 97	3.3e-16	PPR repeat family
PPR	PF01535	52 - 81	7.9e-06	PPR repeat
PPR_1	PF12854	80 - 112	2.2e-12	PPR repeat
PPR	PF01535	86 - 116	8.4e-07	PPR repeat
PPR_2	PF13041	90 - 131	1.8e-09	PPR repeat family
PPR_long	PF17177	101 - 205	7.3e-07	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	115 - 146	1.9e-06	PPR repeat
PPR_2	PF13041	119 - 166	1.1e-14	PPR repeat family
PPR_3	PF13812	141 - 201	4.6e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	149 - 182	2.4e-15	PPR repeat
PPR_2	PF13041	153 - 202	5e-17	PPR repeat family
PPR	PF01535	156 - 186	3.1e-08	PPR repeat
PPR_2	PF13041	188 - 237	1.7e-08	PPR repeat family
PPR_3	PF13812	212 - 268	4.1e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	222 - 251	9.4e-06	PPR repeat
PPR_long	PF17177	223 - 337	2.6e-07	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	225 - 271	7.6e-15	PPR repeat family
PPR	PF01535	227 - 256	1.2e-07	PPR repeat
PPR_1	PF12854	254 - 287	6.2e-13	PPR repeat
PPR_2	PF13041	258 - 306	7.4e-16	PPR repeat family
PPR	PF01535	261 - 291	2.1e-09	PPR repeat
PPR_2	PF13041	297 - 342	4.9e-10	PPR repeat family
PPR_1	PF12854	325 - 355	2.4e-08	PPR repeat
PPR_2	PF13041	329 - 377	5.6e-14	PPR repeat family
PPR	PF01535	331 - 360	2.7e-06	PPR repeat
PPR_1	PF12854	359 - 391	4.1e-09	PPR repeat
PPR_2	PF13041	364 - 414	7.1e-16	PPR repeat family
PPR	PF01535	366 - 393	3.5e-06	PPR repeat
PPR_1	PF12854	398 - 428	1e-08	PPR repeat
PPR_2	PF13041	400 - 447	6.8e-13	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0006720)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G20090 AT4G20090
fragaria_vesca	FvH4_3g13070 FvH4_3g13070 FvH4_3g13070 FvH4_3g13070
malus_domestica	MD10G1226600.v1.1
prunus_persica	Prupe.4G118800_v2.0.a1
pyrus_communis	pycom05g22130 pycom05g22140 pycom10g19050
rosa_chinensis	RchiOBHm_Chr5g0021261
rosa_laevigata	RLG00000032600
rosa_multiflora	Rmu_sc0003392.1_g000013 Rmu_sc0004847.1_g000003
rosa_roxburghii	Rroxscaffold_1G00057240
rosa_rugosa	Rorug05G0065600 Rorug05G0065700 Rorug05G0065800 Rorug05G0065900 Rorug05G0065900
rosa_samantha	Rh5AG154600 Rh5BG154400 Rh5CG168000 Rh5DG154700
rosa_wichuraiana	Rw5G013780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	534, 849, 1590
AasI	GACNNNNNNGTC	1 cut(s)	412
AccI	GTMKAC	1 cut(s)	363
AccII	CGCG	1 cut(s)	282
AciI	CCGC	4 cut(s)	686, 737, 791, 988
AclI	AACGTT	1 cut(s)	1350
AclWI	GGATC	5 cut(s)	128, 276, 1483, 1670, 1671
AcuI	CTGAAG	3 cut(s)	142, 1119, 1276
AcvI	CACGTG	1 cut(s)	1634
AcyI	GRCGYC	1 cut(s)	1036
AfaI	GTAC	5 cut(s)	444, 643, 1356, 1858, 1875
AfiI	CCNNNNNNNGG	5 cut(s)	176, 177, 1281, 1742, 1860
AflII	CTTAAG	1 cut(s)	818
AgsI	TTSAA	8 cut(s)	201, 745, 925, 1084, 1531, 1603, 1651, 1820
AjnI	CCWGG	1 cut(s)	1859
AjuI	GAANNNNNNNTTGG	2 cut(s)	764, 796
AleI	CACNNNNGTG	1 cut(s)	1157
Alw21I	GWGCWC	1 cut(s)	622
Alw26I	GTCTC	2 cut(s)	878, 996
AlwI	GGATC	5 cut(s)	128, 276, 1483, 1670, 1671
AoxI	GGCC	2 cut(s)	180, 1495
ApeKI	GCWGC	5 cut(s)	720, 1340, 1618, 1907, 1929
ArsI	GACNNNNNNTTYG	2 cut(s)	276, 308
AspS9I	GGNCC	3 cut(s)	167, 180, 249
AsuHPI	GGTGA	6 cut(s)	28, 206, 506, 679, 788, 940
AvaII	GGWCC	2 cut(s)	167, 249
BaeGI	GKGCMC	2 cut(s)	939, 1171
BbrPI	CACGTG	1 cut(s)	1634
Bbv12I	GWGCWC	1 cut(s)	622
BbvI	GCAGC	4 cut(s)	707, 1352, 1630, 1919
BceAI	ACGGC	1 cut(s)	1802
BciT130I	CCWGG	1 cut(s)	1861
BcoDI	GTCTC	2 cut(s)	878, 996
BfaI	CTAG	2 cut(s)	1463, 1766
BfmI	CTRYAG	2 cut(s)	360, 1911
BfrI	CTTAAG	1 cut(s)	818
BisI	GCNGC	7 cut(s)	721, 738, 792, 1341, 1619, 1908, 1930
BlsI	GCNGC	7 cut(s)	722, 739, 793, 1342, 1620, 1909, 1931
Bme1390I	CCNGG	1 cut(s)	1861
Bme18I	GGWCC	2 cut(s)	167, 249
BmgT120I	GGNCC	3 cut(s)	167, 180, 249
BmiI	GGNNCC	4 cut(s)	169, 181, 250, 1560
BmrFI	CCNGG	1 cut(s)	1861
BmsI	GCATC	4 cut(s)	591, 696, 748, 1815
BplI	GAGNNNNNCTC	4 cut(s)	707, 739, 1710, 1742
Bpu10I	CCTNAGC	1 cut(s)	1212
BpuEI	CTTGAG	3 cut(s)	44, 74, 1722
BsaAI	YACGTR	3 cut(s)	636, 1358, 1634
BsaHI	GRCGYC	1 cut(s)	1036
BsaI	GGTCTC	1 cut(s)	996
BsaJI	CCNNGG	2 cut(s)	877, 1492
BsaXI	ACNNNNNCTCC	2 cut(s)	993, 1023
Bsc4I	CCNNNNNNNGG	5 cut(s)	176, 177, 1281, 1742, 1860
Bse118I	RCCGGY	1 cut(s)	604
Bse3DI	GCAATG	3 cut(s)	127, 312, 1113
BseBI	CCWGG	1 cut(s)	1861
BseDI	CCNNGG	2 cut(s)	877, 1492
BseGI	GGATG	2 cut(s)	658, 1145
BseLI	CCNNNNNNNGG	5 cut(s)	176, 177, 1281, 1742, 1860
BseMI	GCAATG	3 cut(s)	127, 312, 1113
BseMII	CTCAG	1 cut(s)	1568
BseRI	GAGGAG	2 cut(s)	23, 31
BseSI	GKGCMC	2 cut(s)	939, 1171
BseXI	GCAGC	4 cut(s)	707, 1352, 1630, 1919
Bsh1236I	CGCG	1 cut(s)	282
BshFI	GGCC	2 cut(s)	182, 1497
BsiHKAI	GWGCWC	1 cut(s)	622
BsiSI	CCGG	2 cut(s)	605, 1774
BslFI	GGGAC	3 cut(s)	153, 626, 970
BslI	CCNNNNNNNGG	5 cut(s)	176, 177, 1281, 1742, 1860
BsmAI	GTCTC	2 cut(s)	878, 996
BsmFI	GGGAC	3 cut(s)	153, 626, 970
BsmI	GAATGC	1 cut(s)	1609
BsnI	GGCC	2 cut(s)	182, 1497
Bso31I	GGTCTC	1 cut(s)	996
Bsp1286I	GDGCHC	3 cut(s)	622, 939, 1171
Bsp1407I	TGTACA	3 cut(s)	442, 641, 1873
Bsp143I	GATC	6 cut(s)	133, 268, 1488, 1642, 1663, 1675
Bsp19I	CCATGG	1 cut(s)	1492
BspACI	CCGC	4 cut(s)	686, 737, 791, 988
BspANI	GGCC	2 cut(s)	182, 1497
BspCNI	CTCAG	1 cut(s)	1567
BspFNI	CGCG	1 cut(s)	282
BspLI	GGNNCC	4 cut(s)	169, 181, 250, 1560
BspPI	GGATC	5 cut(s)	128, 276, 1483, 1670, 1671
BspTI	CTTAAG	1 cut(s)	818
BspTNI	GGTCTC	1 cut(s)	996
BsrDI	GCAATG	3 cut(s)	127, 312, 1113
BsrFI	RCCGGY	1 cut(s)	604
BsrGI	TGTACA	3 cut(s)	442, 641, 1873
BssAI	RCCGGY	1 cut(s)	604
BssECI	CCNNGG	2 cut(s)	877, 1492
BssMI	GATC	6 cut(s)	133, 268, 1488, 1642, 1663, 1675
BssNI	GRCGYC	1 cut(s)	1036
BssT1I	CCWWGG	2 cut(s)	877, 1492
Bst2UI	CCWGG	1 cut(s)	1861
Bst4CI	ACNGT	9 cut(s)	409, 617, 866, 1156, 1271, 1376, 1655, 1798, 1870
Bst6I	CTCTTC	2 cut(s)	80, 1095
BstACI	GRCGYC	1 cut(s)	1036
BstAFI	CTTAAG	1 cut(s)	818
BstAUI	TGTACA	3 cut(s)	442, 641, 1873
BstBAI	YACGTR	3 cut(s)	636, 1358, 1634
BstC8I	GCNNGC	4 cut(s)	789, 1250, 1616, 1889
BstDEI	CTNAG	5 cut(s)	253, 527, 1212, 1554, 1893
BstDSI	CCRYGG	1 cut(s)	1492
BstENI	CCTNNNNNAGG	1 cut(s)	1279
BstF5I	GGATG	2 cut(s)	658, 1145
BstFNI	CGCG	1 cut(s)	282
BstKTI	GATC	6 cut(s)	136, 271, 1491, 1645, 1666, 1678
BstMAI	GTCTC	2 cut(s)	878, 996
BstMBI	GATC	6 cut(s)	133, 268, 1488, 1642, 1663, 1675
BstMWI	GCNNNNNNNGC	3 cut(s)	523, 1888, 1938
BstNI	CCWGG	1 cut(s)	1861
BstNSI	RCATGY	3 cut(s)	467, 1252, 1549
BstSCI	CCNGG	1 cut(s)	1859
BstSFI	CTRYAG	2 cut(s)	360, 1911
BstSLI	GKGCMC	2 cut(s)	939, 1171
BstSNI	TACGTA	2 cut(s)	636, 1358
BstUI	CGCG	1 cut(s)	282
BstV1I	GCAGC	4 cut(s)	707, 1352, 1630, 1919
BstX2I	RGATCY	1 cut(s)	133
BstXI	CCANNNNNNTGG	2 cut(s)	491, 1156
BstYI	RGATCY	1 cut(s)	133
BsuRI	GGCC	2 cut(s)	182, 1497
BtgI	CCRYGG	1 cut(s)	1492
BtsCI	GGATG	2 cut(s)	658, 1145
BtsI	GCAGTG	1 cut(s)	768
BtsIMutI	CAGTG	4 cut(s)	401, 768, 1152, 1381
Cac8I	GCNNGC	4 cut(s)	789, 1250, 1616, 1889
Cfr10I	RCCGGY	1 cut(s)	604
Cfr13I	GGNCC	3 cut(s)	167, 180, 249
CseI	GACGC	1 cut(s)	1025
Csp6I	GTAC	5 cut(s)	443, 642, 1355, 1857, 1874
CviAII	CATG	7 cut(s)	464, 485, 505, 1249, 1493, 1546, 1667
CviQI	GTAC	5 cut(s)	443, 642, 1355, 1857, 1874
DdeI	CTNAG	5 cut(s)	253, 527, 1212, 1554, 1893
DpnI	GATC	6 cut(s)	135, 270, 1490, 1644, 1665, 1677
DpnII	GATC	6 cut(s)	133, 268, 1488, 1642, 1663, 1675
DraI	TTTAAA	1 cut(s)	1783
DrdI	GACNNNNNNGTC	1 cut(s)	412
DseDI	GACNNNNNNGTC	1 cut(s)	412
Eam1104I	CTCTTC	2 cut(s)	80, 1095
EarI	CTCTTC	2 cut(s)	80, 1095
Eco105I	TACGTA	2 cut(s)	636, 1358
Eco130I	CCWWGG	2 cut(s)	877, 1492
Eco31I	GGTCTC	1 cut(s)	996
Eco32I	GATATC	1 cut(s)	1017
Eco47I	GGWCC	2 cut(s)	167, 249
Eco57I	CTGAAG	3 cut(s)	142, 1119, 1276
Eco72I	CACGTG	1 cut(s)	1634
EcoNI	CCTNNNNNAGG	1 cut(s)	1279
EcoO109I	RGGNCCY	3 cut(s)	167, 180, 249
EcoRII	CCWGG	1 cut(s)	1859
EcoRV	GATATC	1 cut(s)	1017
EcoT14I	CCWWGG	2 cut(s)	877, 1492
EcoT22I	ATGCAT	1 cut(s)	469
ErhI	CCWWGG	2 cut(s)	877, 1492
FaeI	CATG	7 cut(s)	467, 488, 508, 1252, 1496, 1549, 1670
FalI	AAGNNNNNCTT	4 cut(s)	764, 796, 1305, 1337
FaqI	GGGAC	3 cut(s)	153, 626, 970
FatI	CATG	7 cut(s)	463, 484, 504, 1248, 1492, 1545, 1666
FblI	GTMKAC	1 cut(s)	363
Fnu4HI	GCNGC	7 cut(s)	721, 738, 792, 1341, 1619, 1908, 1930
FokI	GGATG	2 cut(s)	665, 1152
Fsp4HI	GCNGC	7 cut(s)	721, 738, 792, 1341, 1619, 1908, 1930
FspBI	CTAG	2 cut(s)	1463, 1766
GluI	GCNGC	7 cut(s)	721, 738, 792, 1341, 1619, 1908, 1930
HaeIII	GGCC	2 cut(s)	182, 1497
HapII	CCGG	2 cut(s)	605, 1774
HgaI	GACGC	1 cut(s)	1025
Hin1I	GRCGYC	1 cut(s)	1036
Hin1II	CATG	7 cut(s)	467, 488, 508, 1252, 1496, 1549, 1670
HincII	GTYRAC	1 cut(s)	679
HindII	GTYRAC	1 cut(s)	679
HindIII	AAGCTT	1 cut(s)	797
HinfI	GANTC	6 cut(s)	64, 197, 232, 291, 1306, 1318
HpaII	CCGG	2 cut(s)	605, 1774
HphI	GGTGA	6 cut(s)	28, 206, 506, 679, 788, 940
Hpy166II	GTNNAC	4 cut(s)	364, 633, 679, 1145
Hpy188I	TCNGA	4 cut(s)	1099, 1305, 1311, 1848
Hpy8I	GTNNAC	4 cut(s)	364, 633, 679, 1145
Hpy99I	CGWCG	1 cut(s)	1041
HpyAV	CCTTC	5 cut(s)	253, 766, 886, 1114, 1891
HpyCH4III	ACNGT	9 cut(s)	409, 617, 866, 1156, 1271, 1376, 1655, 1798, 1870
HpyCH4IV	ACGT	4 cut(s)	635, 1350, 1357, 1633
HpyF10VI	GCNNNNNNNGC	3 cut(s)	523, 1888, 1938
HpyF3I	CTNAG	5 cut(s)	253, 527, 1212, 1554, 1893
HpySE526I	ACGT	4 cut(s)	635, 1350, 1357, 1633
Hsp92I	GRCGYC	1 cut(s)	1036
Hsp92II	CATG	7 cut(s)	467, 488, 508, 1252, 1496, 1549, 1670
Kzo9I	GATC	6 cut(s)	133, 268, 1488, 1642, 1663, 1675
LmnI	GCTCC	4 cut(s)	36, 625, 728, 1926
Lsp1109I	GCAGC	4 cut(s)	707, 1352, 1630, 1919
LweI	GCATC	4 cut(s)	591, 696, 748, 1815
MaeI	CTAG	2 cut(s)	1463, 1766
MaeII	ACGT	4 cut(s)	635, 1350, 1357, 1633
MaeIII	GTNAC	6 cut(s)	776, 841, 946, 1370, 1687, 1694
MalI	GATC	6 cut(s)	135, 270, 1490, 1644, 1665, 1677
MboI	GATC	6 cut(s)	133, 268, 1488, 1642, 1663, 1675
MboII	GAAGA	7 cut(s)	67, 137, 148, 161, 1112, 1282, 1693
MfeI	CAATTG	1 cut(s)	81
MflI	RGATCY	1 cut(s)	133
MhlI	GDGCHC	3 cut(s)	622, 939, 1171
MluCI	AATT	8 cut(s)	81, 141, 421, 535, 897, 1112, 1255, 1383
MlyI	GAGTC	3 cut(s)	241, 300, 1315
MmeI	TCCRAC	4 cut(s)	678, 867, 1871, 1904
Mph1103I	ATGCAT	1 cut(s)	469
MseI	TTAA	9 cut(s)	411, 420, 432, 546, 819, 978, 1277, 1539, 1782
MslI	CAYNNNNRTG	3 cut(s)	317, 1157, 1671
MspCI	CTTAAG	1 cut(s)	818
MspI	CCGG	2 cut(s)	605, 1774
MspR9I	CCNGG	1 cut(s)	1861
MunI	CAATTG	1 cut(s)	81
Mva1269I	GAATGC	1 cut(s)	1609
MvaI	CCWGG	1 cut(s)	1861
MvnI	CGCG	1 cut(s)	282
MwoI	GCNNNNNNNGC	3 cut(s)	523, 1888, 1938
NcoI	CCATGG	1 cut(s)	1492
NdeII	GATC	6 cut(s)	133, 268, 1488, 1642, 1663, 1675
NlaIII	CATG	7 cut(s)	467, 488, 508, 1252, 1496, 1549, 1670
NlaIV	GGNNCC	4 cut(s)	169, 181, 250, 1560
NmuCI	GTSAC	4 cut(s)	776, 841, 946, 1694
NsiI	ATGCAT	1 cut(s)	469
NspI	RCATGY	3 cut(s)	467, 1252, 1549
OliI	CACNNNNGTG	1 cut(s)	1157
PaeI	GCATGC	1 cut(s)	1252
PctI	GAATGC	1 cut(s)	1609
PfeI	GAWTC	3 cut(s)	64, 197, 1318
PkrI	GCNGC	7 cut(s)	722, 739, 793, 1342, 1620, 1909, 1931
PleI	GAGTC	3 cut(s)	240, 299, 1314
PmaCI	CACGTG	1 cut(s)	1634
PmlI	CACGTG	1 cut(s)	1634
PpsI	GAGTC	3 cut(s)	240, 299, 1314
Ppu21I	YACGTR	3 cut(s)	636, 1358, 1634
PpuMI	RGGWCCY	2 cut(s)	167, 249
PsiI	TTATAA	3 cut(s)	534, 849, 1590
Psp1406I	AACGTT	1 cut(s)	1350
Psp5II	RGGWCCY	2 cut(s)	167, 249
Psp6I	CCWGG	1 cut(s)	1859
PspCI	CACGTG	1 cut(s)	1634
PspGI	CCWGG	1 cut(s)	1859
PspN4I	GGNNCC	4 cut(s)	169, 181, 250, 1560
PspPI	GGNCC	3 cut(s)	167, 180, 249
PspPPI	RGGWCCY	2 cut(s)	167, 249
PsuI	RGATCY	1 cut(s)	133
RsaI	GTAC	5 cut(s)	444, 643, 1356, 1858, 1875
RsaNI	GTAC	5 cut(s)	443, 642, 1355, 1857, 1874
RseI	CAYNNNNRTG	3 cut(s)	317, 1157, 1671
SaqAI	TTAA	9 cut(s)	411, 420, 432, 546, 819, 978, 1277, 1539, 1782
SatI	GCNGC	7 cut(s)	721, 738, 792, 1341, 1619, 1908, 1930
Sau3AI	GATC	6 cut(s)	133, 268, 1488, 1642, 1663, 1675
Sau96I	GGNCC	3 cut(s)	167, 180, 249
SchI	GAGTC	3 cut(s)	241, 300, 1315
ScrFI	CCNGG	1 cut(s)	1861
SduI	GDGCHC	3 cut(s)	622, 939, 1171
SfaNI	GCATC	4 cut(s)	591, 696, 748, 1815
SfcI	CTRYAG	2 cut(s)	360, 1911
SinI	GGWCC	2 cut(s)	167, 249
SmiMI	CAYNNNNRTG	3 cut(s)	317, 1157, 1671
SmlI	CTYRAG	4 cut(s)	59, 89, 818, 1737
SmoI	CTYRAG	4 cut(s)	59, 89, 818, 1737
SnaBI	TACGTA	2 cut(s)	636, 1358
SphI	GCATGC	1 cut(s)	1252
Sse9I	AATT	8 cut(s)	81, 141, 421, 535, 897, 1112, 1255, 1383
SsiI	CCGC	4 cut(s)	686, 737, 791, 988
SspI	AATATT	1 cut(s)	511
SspMI	CTAG	2 cut(s)	1463, 1766
StyD4I	CCNGG	1 cut(s)	1859
StyI	CCWWGG	2 cut(s)	877, 1492
TaaI	ACNGT	9 cut(s)	409, 617, 866, 1156, 1271, 1376, 1655, 1798, 1870
TaiI	ACGT	4 cut(s)	638, 1353, 1360, 1636
TaqI	TCGA	3 cut(s)	271, 1006, 1728
TasI	AATT	8 cut(s)	81, 141, 421, 535, 897, 1112, 1255, 1383
TatI	WGTACW	3 cut(s)	442, 641, 1873
TauI	GCSGC	2 cut(s)	740, 794
TfiI	GAWTC	3 cut(s)	64, 197, 1318
Tru1I	TTAA	9 cut(s)	411, 420, 432, 546, 819, 978, 1277, 1539, 1782
Tru9I	TTAA	9 cut(s)	411, 420, 432, 546, 819, 978, 1277, 1539, 1782
TscAI	CASTG	4 cut(s)	401, 768, 1159, 1381
TseFI	GTSAC	4 cut(s)	776, 841, 946, 1694
TseI	GCWGC	5 cut(s)	720, 1340, 1618, 1907, 1929
Tsp45I	GTSAC	4 cut(s)	776, 841, 946, 1694
TspDTI	ATGAA	8 cut(s)	138, 290, 301, 362, 521, 852, 1124, 1221
TspRI	CASTG	4 cut(s)	401, 768, 1159, 1381
Vha464I	CTTAAG	1 cut(s)	818
VpaK11BI	GGWCC	2 cut(s)	167, 249
XagI	CCTNNNNNAGG	1 cut(s)	1279
XceI	RCATGY	3 cut(s)	467, 1252, 1549
XmiI	GTMKAC	1 cut(s)	363
XspI	CTAG	2 cut(s)	1463, 1766
Zsp2I	ATGCAT	1 cut(s)	469

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.