Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0006720

Physical Location & Seq

Genomic Coordinates Forward (+)

22236003 .. 22238462

Gene Structure 2460 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom10g19050.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2022 bp

ATGCCAAAATTCTCAACTTACTACTCGAAGCTCCTCGGCAGCTCAATCCTACAGGGCGTTTGGAAGCTGGGTCTTTATCCAATCCCCCTATGTGAGTTGTTAACTTCTTCACTTCTCTCTCACTATTCAGTTGTTGCAATTCCATCCAACCAAACTCTCGAAGCCGAACCTGTAAACAATGACGAAATCCAGCCCCCACTTTCTAATGAAATGTTCAGGAAAGGTGCCAAATTGGGTTCTTACAGATCGAGTGATTCGACATTTTATTCACTCATTGAGAATTACGCGAATTCGGGTGATTTTCGGTCCCTGGAGCAGGTTTTGGATCGCATGAAGCGCGAAAGGCGGGTTTTTATTGAGAAGAGCTTTATTCTGATGTTTAGAGCTTTTGGAAAAGCGCATTTACCCAATAAAGCTGTAGAATTGTTCTACAGAATGGTGGATGAATTTCAGTGTAGACGAACTGTTAAGTCGTTTAATTCGGTTCTTAATGTCATTATACAGGAGGGCCATTATTCTCATGCTATAGAGTTTTATTCCCGTGTTGTTGGTACTGCAAACTTGAACATTTCGCCCAATGTACTCAGTTATAATCTGATTATCAAGGCCATGTGTAAGTTTGGATTGGTTGATAGAGCAGTCGAATTGTTTAGAGAAATGCCGAGTAGGAATTGCACTCCTGATGTGTTCACGTATTGTACATTGATGGATGGATTATGCAAGGATAATAGGATTGATGAGGCCGTTTTTTTGTTGGATGAAATGCAAATTGAGGGGTGCTTGCCGAGTCCTATGACTTTTAATGTGTTAATAAACGCATTGTGCAAGAAGGGTGACTTGGCACGTGCAGCGAAGCTTGTTGATAATATGTTTCTCAAAGGCTGTGTTCCAAATGAAGTCACTTATAACACCCTTATTCATGGTTTGTGTCTCAAGGGTAAGTTGGATAAGGCAGTTAGTCTTTTGGATCGAATGATTTCAAATAAATGTGTGCCTAATGATGTGACATACGGAACAATCATCAATGGACTTGTTAAGCAAGGACGAGCAGTTGATGGGGCTCGAGTGTTGATCTCTATGGAGGAAAGAGGGCGTCATGCAAATGAGTATATTTATTCGGTCCTTGTTAGTGGACTGTTCAAGGAGGGAAAATCTGATGATGCAATGATATTGTGGAAGGAGATGATGGAGAAGGGATGTAAACCCAACACTGTTGTCTATAGTGCTCTGATAGATGGCCTTTGTCGAGAAGGAAAACCAGATGAAGCCAAGGAAGTATTCTGTGAGATGGTGAGTAATGGTTACATGCCCAATTCCTTCACTTATAGCTCCTTAATGAGGGGGTTCTTTCAGACGGGTCAGAGTAAAAAAGCCATTCGTTTGTGGAATGAAATGGCAAACAAGAATTTTATGCATAATGAGGTGTGTTACAGTGTCCTAATTCATGGTTTATGCAAGGATGGGCAACTCAAAGAGGCCCTGATGGCGTGGCAGAAGATGTTGGGAAGTGGACATAAACCTGATGTTGTGGCTTATAGTTCAATGATTCATGGCCTTTGCAATGATGGTTTGGTTGAGCAGGGTTTGAAACTTTTCAATGAAATGCTTTGTCAGGAGCCTGAATGTCAACCAGATGTTATCACTTTTAACATACTTTTCGATGCTATCTGCAAGCAGAGTAATATCTCCCTTGCCATTGATATTTTAAATAGAATGCTGGATAGGGGTTGTGATCCCGATTCAGTTACGTGTGACATCTTCCTGAGAACTTTGAGAGAAAAGCTCAACCCACCTCAAGATGGAAGGGAGTTCCTAAATGAGCTTGTTGTCCGTCTATTTAAGCAGCAGAGGATAGTAGGTGCTTCCCAGATTGTGGAAGTAATGCTGAAAAAGTTTTTGCCACCCAAAGCCTCTGTGTGGACAAAAGTTGTGCAAGAGCTTTGCAAGCCTAAGAAGTTTCTGTCCATTCTTTTGGAGAAGGAAACCAGAAATAATGAGGCTAACTTTTGGTTGAAGGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006412 GO:0006518 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009451 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0019538 GO:0022414 GO:0032501 GO:0032502 GO:0032543 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:0140053 GO:1901360 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

674

Amino Acids

76.34

Weight (kDa)

8.19

Isoelectric Point (pI)

38.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_1	PF12854	189 - 220	6.4e-11	PPR repeat
PPR_2	PF13041	192 - 241	1.6e-18	PPR repeat family
TPR_24	PF23276	194 - 286	6.3e-07	Fungal tetratrico peptide repeats
PPR	PF01535	196 - 225	3e-07	PPR repeat
PPR_3	PF13812	216 - 274	8.9e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	223 - 256	9.3e-13	PPR repeat
PPR	PF01535	230 - 260	8.4e-07	PPR repeat
PPR_2	PF13041	234 - 276	1.2e-11	PPR repeat family
PPR_long	PF17177	251 - 350	1.6e-06	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	259 - 290	2.1e-09	PPR repeat
PPR_2	PF13041	262 - 310	4.7e-16	PPR repeat family
PPR_3	PF13812	285 - 345	5.2e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	293 - 325	6.2e-16	PPR repeat
PPR_2	PF13041	297 - 346	4.8e-17	PPR repeat family
PPR	PF01535	300 - 330	6.7e-09	PPR repeat
PPR_2	PF13041	335 - 381	1.1e-06	PPR repeat family
PPR_long	PF17177	350 - 457	1.1e-06	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	356 - 412	7.9e-07	Pentatricopeptide repeat domain
PPR_2	PF13041	368 - 416	7.6e-14	PPR repeat family
PPR	PF01535	371 - 400	6.9e-06	PPR repeat
PPR_1	PF12854	398 - 431	5e-14	PPR repeat
PPR_2	PF13041	402 - 450	5.2e-17	PPR repeat family
PPR	PF01535	405 - 434	8.1e-10	PPR repeat
PPR_1	PF12854	433 - 465	2.1e-06	PPR repeat
PPR_2	PF13041	444 - 486	8.7e-11	PPR repeat family
PPR_1	PF12854	473 - 500	6.4e-07	PPR repeat
PPR_2	PF13041	473 - 521	7.9e-15	PPR repeat family
PPR	PF01535	475 - 504	2.8e-06	PPR repeat
PPR_1	PF12854	504 - 535	7.5e-11	PPR repeat
PPR_2	PF13041	507 - 558	5.3e-15	PPR repeat family
PPR	PF01535	510 - 536	2.2e-06	PPR repeat
PPR_2	PF13041	544 - 591	5.6e-12	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0006720)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G20090 AT4G20090
fragaria_vesca	FvH4_3g13070 FvH4_3g13070 FvH4_3g13070 FvH4_3g13070
malus_domestica	MD10G1226600.v1.1
prunus_persica	Prupe.4G118800_v2.0.a1
pyrus_communis	pycom05g22130 pycom05g22140 pycom10g19050
rosa_chinensis	RchiOBHm_Chr5g0021261
rosa_laevigata	RLG00000032600
rosa_multiflora	Rmu_sc0003392.1_g000013 Rmu_sc0004847.1_g000003
rosa_roxburghii	Rroxscaffold_1G00057240
rosa_rugosa	Rorug05G0065600 Rorug05G0065700 Rorug05G0065800 Rorug05G0065900 Rorug05G0065900
rosa_samantha	Rh5AG154600 Rh5BG154400 Rh5CG168000 Rh5DG154700
rosa_wichuraiana	Rw5G013780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	591, 906
Acc36I	ACCTGC	1 cut(s)	307
AccB1I	GGYRCC	1 cut(s)	224
AccB7I	CCANNNNNTGG	1 cut(s)	1873
AccI	GTMKAC	1 cut(s)	457
AccII	CGCG	2 cut(s)	287, 339
AciI	CCGC	1 cut(s)	346
AclWI	GGATC	3 cut(s)	333, 975, 1727
AcsI	RAATTY	4 cut(s)	8, 289, 446, 1405
AcvI	CACGTG	1 cut(s)	845
AcyI	GRCGYC	1 cut(s)	1093
AfaI	GTAC	3 cut(s)	553, 582, 700
AfiI	CCNNNNNNNGG	5 cut(s)	316, 1338, 1799, 1873, 1917
AflIII	ACRYGT	1 cut(s)	1748
AgsI	TTSAA	7 cut(s)	565, 981, 1141, 1542, 1588, 1597, 2014
AjnI	CCWGG	1 cut(s)	309
AjuI	GAANNNNNNNTTGG	4 cut(s)	821, 853, 1262, 1294
Alw21I	GWGCWC	1 cut(s)	1228
Alw26I	GTCTC	1 cut(s)	935
AlwI	GGATC	3 cut(s)	333, 975, 1727
Ama87I	CYCGRG	1 cut(s)	1062
AoxI	GGCC	6 cut(s)	508, 606, 741, 1237, 1476, 1552
ApeKI	GCWGC	3 cut(s)	39, 848, 1843
ApoI	RAATTY	4 cut(s)	8, 289, 446, 1405
Asp700I	GAANNNNTTC	2 cut(s)	976, 1592
AspLEI	GCGC	2 cut(s)	339, 400
AspS9I	GGNCC	4 cut(s)	306, 508, 1120, 1477
AsuHPI	GGTGA	3 cut(s)	308, 845, 1303
AvaI	CYCGRG	1 cut(s)	1062
AvaII	GGWCC	2 cut(s)	306, 1120
BanI	GGYRCC	1 cut(s)	224
BanII	GRGCYC	1 cut(s)	1063
BbrPI	CACGTG	1 cut(s)	845
Bbv12I	GWGCWC	1 cut(s)	1228
BbvI	GCAGC	3 cut(s)	51, 860, 1855
BceAI	ACGGC	1 cut(s)	728
BciT130I	CCWGG	1 cut(s)	311
BcoDI	GTCTC	1 cut(s)	935
BfmI	CTRYAG	5 cut(s)	50, 417, 430, 525, 1219
BfuAI	ACCTGC	1 cut(s)	307
BglI	GCCNNNNNGGC	1 cut(s)	1484
BisI	GCNGC	3 cut(s)	40, 849, 1844
BlsI	GCNGC	3 cut(s)	41, 850, 1845
Bme1390I	CCNGG	1 cut(s)	311
Bme18I	GGWCC	2 cut(s)	306, 1120
BmeT110I	CYCGRG	1 cut(s)	1062
BmgT120I	GGNCC	4 cut(s)	306, 508, 1120, 1477
BmiI	GGNNCC	3 cut(s)	226, 308, 1617
BmrFI	CCNGG	1 cut(s)	311
BmsI	GCATC	2 cut(s)	1150, 1651
BplI	GAGNNNNNCTC	2 cut(s)	1767, 1799
BpmI	CTGGAG	1 cut(s)	332
BpuEI	CTTGAG	2 cut(s)	917, 1779
BsaAI	YACGTR	3 cut(s)	693, 845, 1749
BsaHI	GRCGYC	1 cut(s)	1093
BsaJI	CCNNGG	3 cut(s)	34, 309, 1269
Bsc4I	CCNNNNNNNGG	5 cut(s)	316, 1338, 1799, 1873, 1917
Bse3DI	GCAATG	2 cut(s)	1170, 1567
BseBI	CCWGG	1 cut(s)	311
BseDI	CCNNGG	3 cut(s)	34, 309, 1269
BseGI	GGATG	6 cut(s)	143, 448, 715, 763, 1202, 1465
BseLI	CCNNNNNNNGG	5 cut(s)	316, 1338, 1799, 1873, 1917
BseMI	GCAATG	2 cut(s)	1170, 1567
BseMII	CTCAG	2 cut(s)	598, 1754
BseRI	GAGGAG	1 cut(s)	23
BseXI	GCAGC	3 cut(s)	51, 860, 1855
BseYI	CCCAGC	1 cut(s)	67
BsgI	GTGCAG	1 cut(s)	867
Bsh1236I	CGCG	2 cut(s)	287, 339
BshFI	GGCC	6 cut(s)	510, 608, 743, 1239, 1478, 1554
BshNI	GGYRCC	1 cut(s)	224
BsiHKAI	GWGCWC	1 cut(s)	1228
BsiHKCI	CYCGRG	1 cut(s)	1062
BslFI	GGGAC	1 cut(s)	292
BslI	CCNNNNNNNGG	5 cut(s)	316, 1338, 1799, 1873, 1917
BsmAI	GTCTC	1 cut(s)	935
BsmFI	GGGAC	1 cut(s)	292
BsmI	GAATGC	1 cut(s)	1719
BsnI	GGCC	6 cut(s)	510, 608, 743, 1239, 1478, 1554
BsoBI	CYCGRG	1 cut(s)	1062
Bsp1286I	GDGCHC	2 cut(s)	1063, 1228
Bsp1407I	TGTACA	1 cut(s)	698
Bsp143I	GATC	5 cut(s)	245, 325, 967, 1071, 1732
BspACI	CCGC	1 cut(s)	346
BspANI	GGCC	6 cut(s)	510, 608, 743, 1239, 1478, 1554
BspCNI	CTCAG	2 cut(s)	597, 1755
BspFNI	CGCG	2 cut(s)	287, 339
BspLI	GGNNCC	3 cut(s)	226, 308, 1617
BspMI	ACCTGC	1 cut(s)	307
BspPI	GGATC	3 cut(s)	333, 975, 1727
BspQI	GCTCTTC	1 cut(s)	356
BspT107I	GGYRCC	1 cut(s)	224
BsrDI	GCAATG	2 cut(s)	1170, 1567
BsrGI	TGTACA	1 cut(s)	698
BssECI	CCNNGG	3 cut(s)	34, 309, 1269
BssMI	GATC	5 cut(s)	245, 325, 967, 1071, 1732
BssNI	GRCGYC	1 cut(s)	1093
BssT1I	CCWWGG	1 cut(s)	1269
Bst2UI	CCWGG	1 cut(s)	311
Bst4CI	ACNGT	4 cut(s)	466, 1137, 1213, 1433
Bst6I	CTCTTC	1 cut(s)	356
BstACI	GRCGYC	1 cut(s)	1093
BstAUI	TGTACA	1 cut(s)	698
BstBAI	YACGTR	3 cut(s)	693, 845, 1749
BstC8I	GCNNGC	3 cut(s)	782, 1673, 1946
BstDEI	CTNAG	3 cut(s)	584, 1763, 1950
BstENI	CCTNNNNNAGG	2 cut(s)	314, 1336
BstF5I	GGATG	6 cut(s)	143, 448, 715, 763, 1202, 1465
BstFNI	CGCG	2 cut(s)	287, 339
BstHHI	GCGC	2 cut(s)	339, 400
BstKTI	GATC	5 cut(s)	248, 328, 970, 1074, 1735
BstMAI	GTCTC	1 cut(s)	935
BstMBI	GATC	5 cut(s)	245, 325, 967, 1071, 1732
BstMWI	GCNNNNNNNGC	5 cut(s)	336, 343, 848, 1484, 1945
BstNI	CCWGG	1 cut(s)	311
BstNSI	RCATGY	1 cut(s)	1309
BstSCI	CCNGG	1 cut(s)	309
BstSFI	CTRYAG	5 cut(s)	50, 417, 430, 525, 1219
BstUI	CGCG	2 cut(s)	287, 339
BstV1I	GCAGC	3 cut(s)	51, 860, 1855
BstXI	CCANNNNNNTGG	1 cut(s)	1972
BsuRI	GGCC	6 cut(s)	510, 608, 743, 1239, 1478, 1554
BtsCI	GGATG	6 cut(s)	143, 448, 715, 763, 1202, 1465
BtsIMutI	CAGTG	3 cut(s)	458, 1209, 1438
BveI	ACCTGC	1 cut(s)	307
Cac8I	GCNNGC	3 cut(s)	782, 1673, 1946
CfoI	GCGC	2 cut(s)	339, 400
Cfr13I	GGNCC	4 cut(s)	306, 508, 1120, 1477
CseI	GACGC	1 cut(s)	1082
Csp6I	GTAC	3 cut(s)	552, 581, 699
CviAII	CATG	8 cut(s)	331, 521, 610, 920, 1097, 1306, 1445, 1550
CviQI	GTAC	3 cut(s)	552, 581, 699
DdeI	CTNAG	3 cut(s)	584, 1763, 1950
DpnI	GATC	5 cut(s)	247, 327, 969, 1073, 1734
DpnII	GATC	5 cut(s)	245, 325, 967, 1071, 1732
DraI	TTTAAA	1 cut(s)	1707
Eam1104I	CTCTTC	1 cut(s)	356
EarI	CTCTTC	1 cut(s)	356
Eco130I	CCWWGG	1 cut(s)	1269
Eco24I	GRGCYC	1 cut(s)	1063
Eco47I	GGWCC	2 cut(s)	306, 1120
Eco72I	CACGTG	1 cut(s)	845
Eco88I	CYCGRG	1 cut(s)	1062
EcoNI	CCTNNNNNAGG	2 cut(s)	314, 1336
EcoO109I	RGGNCCY	1 cut(s)	1477
EcoRI	GAATTC	1 cut(s)	289
EcoRII	CCWGG	1 cut(s)	309
EcoT14I	CCWWGG	1 cut(s)	1269
EcoT22I	ATGCAT	1 cut(s)	1416
EcoT38I	GRGCYC	1 cut(s)	1063
ErhI	CCWWGG	1 cut(s)	1269
FaeI	CATG	8 cut(s)	334, 524, 613, 923, 1100, 1309, 1448, 1553
FalI	AAGNNNNNCTT	2 cut(s)	821, 853
FaqI	GGGAC	1 cut(s)	292
FatI	CATG	8 cut(s)	330, 520, 609, 919, 1096, 1305, 1444, 1549
FauI	CCCGC	1 cut(s)	339
FblI	GTMKAC	1 cut(s)	457
Fnu4HI	GCNGC	3 cut(s)	40, 849, 1844
FokI	GGATG	6 cut(s)	130, 455, 722, 770, 1209, 1472
FriOI	GRGCYC	1 cut(s)	1063
Fsp4HI	GCNGC	3 cut(s)	40, 849, 1844
GlaI	GCGC	2 cut(s)	338, 399
GluI	GCNGC	3 cut(s)	40, 849, 1844
GsaI	CCCAGC	1 cut(s)	71
GsuI	CTGGAG	1 cut(s)	332
HaeIII	GGCC	6 cut(s)	510, 608, 743, 1239, 1478, 1554
HgaI	GACGC	1 cut(s)	1082
HhaI	GCGC	2 cut(s)	339, 400
Hin1I	GRCGYC	1 cut(s)	1093
Hin1II	CATG	8 cut(s)	334, 524, 613, 923, 1100, 1309, 1448, 1553
Hin6I	GCGC	2 cut(s)	337, 398
HinP1I	GCGC	2 cut(s)	337, 398
HincII	GTYRAC	2 cut(s)	102, 1628
HindII	GTYRAC	2 cut(s)	102, 1628
HindIII	AAGCTT	1 cut(s)	854
HinfI	GANTC	4 cut(s)	254, 787, 1546, 1739
HpaI	GTTAAC	1 cut(s)	102
HphI	GGTGA	3 cut(s)	308, 845, 1303
Hpy166II	GTNNAC	9 cut(s)	102, 175, 458, 690, 1133, 1202, 1511, 1628, 1920
Hpy188I	TCNGA	6 cut(s)	375, 597, 1156, 1230, 1353, 1362
Hpy188III	TCNNGA	8 cut(s)	158, 217, 680, 1247, 1613, 1736, 1762, 1796
Hpy8I	GTNNAC	9 cut(s)	102, 175, 458, 690, 1133, 1202, 1511, 1628, 1920
HpyAV	CCTTC	8 cut(s)	823, 1171, 1186, 1244, 1327, 1797, 1972, 2008
HpyCH4III	ACNGT	4 cut(s)	466, 1137, 1213, 1433
HpyCH4IV	ACGT	3 cut(s)	692, 844, 1748
HpyF10VI	GCNNNNNNNGC	5 cut(s)	336, 343, 848, 1484, 1945
HpyF3I	CTNAG	3 cut(s)	584, 1763, 1950
HpySE526I	ACGT	3 cut(s)	692, 844, 1748
Hsp92I	GRCGYC	1 cut(s)	1093
Hsp92II	CATG	8 cut(s)	334, 524, 613, 923, 1100, 1309, 1448, 1553
HspAI	GCGC	2 cut(s)	337, 398
KspAI	GTTAAC	1 cut(s)	102
Kzo9I	GATC	5 cut(s)	245, 325, 967, 1071, 1732
LguI	GCTCTTC	1 cut(s)	356
LmnI	GCTCC	4 cut(s)	36, 313, 1334, 1615
Lsp1109I	GCAGC	3 cut(s)	51, 860, 1855
LweI	GCATC	2 cut(s)	1150, 1651
MaeII	ACGT	3 cut(s)	692, 844, 1748
MaeIII	GTNAC	7 cut(s)	833, 898, 1003, 1301, 1427, 1744, 1751
MalI	GATC	5 cut(s)	247, 327, 969, 1073, 1734
MboI	GATC	5 cut(s)	245, 325, 967, 1071, 1732
MboII	GAAGA	4 cut(s)	99, 373, 1507, 1750
MhlI	GDGCHC	2 cut(s)	1063, 1228
MlyI	GAGTC	1 cut(s)	796
MmeI	TCCRAC	3 cut(s)	171, 735, 924
Mph1103I	ATGCAT	1 cut(s)	1416
MroXI	GAANNNNTTC	2 cut(s)	976, 1592
MslI	CAYNNNNRTG	1 cut(s)	1101
MspR9I	CCNGG	1 cut(s)	311
Mva1269I	GAATGC	1 cut(s)	1719
MvaI	CCWGG	1 cut(s)	311
MvnI	CGCG	2 cut(s)	287, 339
MwoI	GCNNNNNNNGC	5 cut(s)	336, 343, 848, 1484, 1945
NdeII	GATC	5 cut(s)	245, 325, 967, 1071, 1732
NlaIII	CATG	8 cut(s)	334, 524, 613, 923, 1100, 1309, 1448, 1553
NlaIV	GGNNCC	3 cut(s)	226, 308, 1617
NmeAIII	GCCGAG	3 cut(s)	15, 687, 810
NmuCI	GTSAC	4 cut(s)	833, 898, 1003, 1751
NsiI	ATGCAT	1 cut(s)	1416
NspI	RCATGY	1 cut(s)	1309
PaeR7I	CTCGAG	1 cut(s)	1062
PciSI	GCTCTTC	1 cut(s)	356
PcsI	WCGNNNNNNNCGW	1 cut(s)	254
PctI	GAATGC	1 cut(s)	1719
PdmI	GAANNNNTTC	2 cut(s)	976, 1592
PfeI	GAWTC	3 cut(s)	254, 1546, 1739
PflMI	CCANNNNNTGG	1 cut(s)	1873
PkrI	GCNGC	3 cut(s)	41, 850, 1845
PleI	GAGTC	1 cut(s)	795
PmaCI	CACGTG	1 cut(s)	845
PmlI	CACGTG	1 cut(s)	845
PpsI	GAGTC	1 cut(s)	795
Ppu21I	YACGTR	3 cut(s)	693, 845, 1749
PsiI	TTATAA	2 cut(s)	591, 906
Psp6I	CCWGG	1 cut(s)	309
PspCI	CACGTG	1 cut(s)	845
PspFI	CCCAGC	1 cut(s)	67
PspGI	CCWGG	1 cut(s)	309
PspN4I	GGNNCC	3 cut(s)	226, 308, 1617
PspPI	GGNCC	4 cut(s)	306, 508, 1120, 1477
PspXI	VCTCGAGB	1 cut(s)	1062
RsaI	GTAC	3 cut(s)	553, 582, 700
RsaNI	GTAC	3 cut(s)	552, 581, 699
RseI	CAYNNNNRTG	1 cut(s)	1101
SapI	GCTCTTC	1 cut(s)	356
SatI	GCNGC	3 cut(s)	40, 849, 1844
Sau3AI	GATC	5 cut(s)	245, 325, 967, 1071, 1732
Sau96I	GGNCC	4 cut(s)	306, 508, 1120, 1477
SchI	GAGTC	1 cut(s)	796
ScrFI	CCNGG	1 cut(s)	311
SduI	GDGCHC	2 cut(s)	1063, 1228
SfaNI	GCATC	2 cut(s)	1150, 1651
SfcI	CTRYAG	5 cut(s)	50, 417, 430, 525, 1219
Sfr274I	CTCGAG	1 cut(s)	1062
SinI	GGWCC	2 cut(s)	306, 1120
SlaI	CTCGAG	1 cut(s)	1062
SmiMI	CAYNNNNRTG	1 cut(s)	1101
SmlI	CTYRAG	3 cut(s)	932, 1062, 1794
SmoI	CTYRAG	3 cut(s)	932, 1062, 1794
SsiI	CCGC	1 cut(s)	346
StyD4I	CCNGG	1 cut(s)	309
StyI	CCWWGG	1 cut(s)	1269
TaaI	ACNGT	4 cut(s)	466, 1137, 1213, 1433
TaiI	ACGT	3 cut(s)	695, 847, 1751
TaqI	TCGA	9 cut(s)	26, 159, 248, 257, 642, 970, 1063, 1246, 1659
TaqII	GACCGA	2 cut(s)	294, 1108
TatI	WGTACW	2 cut(s)	580, 698
TfiI	GAWTC	3 cut(s)	254, 1546, 1739
TscAI	CASTG	3 cut(s)	458, 1216, 1438
TseFI	GTSAC	4 cut(s)	833, 898, 1003, 1751
TseI	GCWGC	3 cut(s)	39, 848, 1843
Tsp45I	GTSAC	4 cut(s)	833, 898, 1003, 1751
TspGWI	ACGGA	2 cut(s)	1026, 1820
TspRI	CASTG	3 cut(s)	458, 1216, 1438
Van91I	CCANNNNNTGG	1 cut(s)	1873
VpaK11BI	GGWCC	2 cut(s)	306, 1120
XagI	CCTNNNNNAGG	2 cut(s)	314, 1336
XapI	RAATTY	4 cut(s)	8, 289, 446, 1405
XceI	RCATGY	1 cut(s)	1309
XhoI	CTCGAG	1 cut(s)	1062
XmiI	GTMKAC	1 cut(s)	457
XmnI	GAANNNNTTC	2 cut(s)	976, 1592
Zsp2I	ATGCAT	1 cut(s)	1416

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.