FvH4_3g16200
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0011424
Physical Location & Seq
Reverse (-)
10215065 .. 10220042
4978 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g16200.t1

Sequence Viewer

Length: 2934 bp
ATGGTTTCTTCTCACCTGGAAATGCTATTACACTTGGGATTCCTAGTGTTGTGTTTCTGTTTTGGCAACACAAACTCATTAGGTGAGGAAAGTCTTTTTCTTTTGGAGTTCAAGAGAACTTTGTCTGATCCAAGTAACAATCTTGGAAGCTGGAATTCCAAGCATTTGAGTCCTTGCAGTTGGACTGGTGTGAGGTGTCTCAAGTCCAAGGTAACTTCTATAAATCTCAGCGGCCGTAATTTGTCTGGTGCTTTGTCTCCAATCATTTGCAATCTTCCTTACTTAGTTGAATTCAATGTGTCCATTAACTTCTTCTCTGGCCCATTTCCCAATGGTCTTGCTAACTGTCATAATCTAGAGATTCTAGACCTTTGCACAAATAGGTTTCATGGGGAATTGATTACCCCATTCACTAAAATGGCAAACCTTAGGAAGTTGTATCTCTGTGAGAATTATGTTTTTGGTGAAATGCCTGAGGAGATAGGGAACTTAGCTCTTATTGAGGAGCTTGTGATTTATAGTAATAATCTCACTGGCTCCATTCCTGGGTCAATTAGTAAGTTGAAAAGGTTAGAAGTCCTCAGGGCGGGTCGAAATTCTCTTTCGGGTCCAATACCAACTGGTATCAGTGAGTGTGAGAGCTTGGAGGTTTTGGGGTTGTCACAGAATCATTTAGAAGGTTCAATTCCTAGGGAGCTTGAGAAACTTCAAAATCTGACTGATTTGATCCTGTGGCAAAATCATTTAACCGGTTCGGTTCCTCCTGAGATTGGTAATCTAAGTAGTTTAGAGTTGCTTGCTTTGCATCAAAACTCTCTCGGAGGAATGATCCCCAAGGAACTTGGGAAGTTAGCACAGCTGAAGAAATTGTATATATACACCAACCAGTTGAATGGAACTATCCCAAGTGAACTAGGGAATTGTACCAATGCGGTTCATATAGATTTTTCTGAAAACCAGTTAACTGGAGTCATACCGCGGGAGTTGGGTTACATTCCTAATCTTGTCTTGCTTCACCTCTTCGAAAATCATCTGGAAGGAAACATTCCGAGGGAGCTTGGGGAGTTGAGGCAGCTGCAGATGTTAGACTTGTCCATAAACAATTTGACTGGCACAATCCCTCTAGAATTTCAAAACCTTACTTACATGGATGAGTTGCAATTGTTTGATAATCATCTCGAGGGTAAAATTCCTCCTCTCCTTGGAGCTAACAGTAACCTCAGCATTCTTGACATGTCTGCAAATAAGCTTGAGGGTAGCATACCTGCACATCTTTGCAAGTATGGGAAATTAGCATTTCTAAGCCTTGGGTCAAATAGGTTGTCTGGAAATATTCCTTATGGTATTAAAACATGCAAGTCTTTAGTGCAACTGATGCTAGGAGACAATCATCTTACAGGAAGTCTGCCTATGGAGTTATACACTCTTTCTGCTCTTGAAGTCTTTCAAAACCGATTCTCAGGACCTATACCTCCAGAGATTGGCAGGTTTAGAAGTTTAGAAAGGCTACTGTTGTCAGATAACTATTTTATTGGGTACATTCCTCCTGTGATCGGCAACCTATCGCAGCTTGTGACCTTCAACTTGTCCTCCAACAGGCTCACAGGGAGCATTCCTCGTGAGCTGGGAAATTGTACAAAGCTACAGAGGCTTGATCTCAGTAGGAATTACTTCACTGGAGTTCTCCCGGAGGAACTGGGAAAGCTAGTGAATCTGGAACTTCTGAAGCTTTCTGATAACAAGTTGATGGGAGGGATACCGAGTTCGCTAGGGGACCTAGTCCGATTGACTGAGTTGCAGATGGGGGGAAATCACTTATCTGGTAACATCCCTTTTCAACTGGGCCAACTAAGTGCTCTACAGATTGCCCTCAATATAAGCCATAATAATCTTTCAGGTGAAATTCCTGAAAAGTTGGGGGACTTGCAGATGTTGATATCCCTTTACTTGAATGATAATCAGCTTGTTGGTGAGATTCCTACCTCAATCGGTGAGTTGCTTAGCCTTTTGGTGTGCAACCTCTCTAACAATAACCTAGTGGGAACTGTGCCAAACACACAAGTATTTCGGAGGATGGATTCTTCGAATTTTGCTGGAAACAATGGATTGTGCAGATCAGGCTCTTATCATTGTCATCAATCTGCAGTTCAGTCTAATACTTCAAAACGGAGCTGGATAAAGGAGGGTTCATCTAAAGAGAAATTAGTAAGCATCATCGCTGCTGTAATTGGATTCATTTCCTTGATTCTCATAGTTGGTTTCTGTTGGGCGATGAAGCGCACCAGACCTACTTTTGTTCCACTTGAAGATCCAATCAAGCCAGACGTGTTGGACAACTATTACTTTCCGAAGGAAGGTTTCAAGTACCAGGATCTTGTTGTAGCCACCAACAATTTTTCAGACAATGCAGTTCTTGGAAGGGGAGCCTGTGGCACTGTGTACAAGGCTGTTATGGCTGATGGGCAGGTGATTGCAGTCAAAAAGCTCAGGGCACAAGGGGAAGGAGTTGGTGTCGATAGCAGCTTCCGCGCTGAGATATCAACCCTTGGGAATATCAGCCATTGCAATATTGTGAAGCTCTATGGCTTCTGCTGTCACCAAGACTCAAATCTGCTCTTGTATGAGTACATGGAAAATGGTAGCCTAGGAGAACATCTACATGGAAATGATCAAAGATGTTTTCTAGACTGGAATACACGATATAAGATTGCTCTTGGAGCAGCAGAAGGTTTGTGCTATCTCCATTATTACTGCAAGCCCCAAATCGTCCACCGTGACATAAAGTCAAATAACATTTTACTGGATGAAGTTCTTGAAGCACATGTGGGAGATTTCGGCTTGGCAAAATTGATTGAACTGCCATACTCAAAATCCATGTCTGCTGTTGCTGGCTCATATGGCTACATTGCACCAGATCCTGAAAAGGGAAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase

Protein Analysis

978

Amino Acids

107.66

Weight (kDa)

6.01

Isoelectric Point (pI)

32.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 29 - 66 6.3e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 105 - 244 7.7e-14 Leucine-rich repeat region
LRR_8 PF13855 238 - 297 4.7e-06 Leucine rich repeat
LRR_8 PF13855 498 - 557 1.5e-07 Leucine rich repeat
LRR_8 PF13855 547 - 606 4.8e-08 Leucine rich repeat
Pkinase PF00069 801 - 972 2.4e-34 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 803 - 960 1.8e-28 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011424)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17230 AT1G17230 AT1G17230
fragaria_vesca FvH4_3g16200 FvH4_3g16200 FvH4_3g16200
malus_domestica MD05G1211500.v1.1
prunus_persica Prupe.4G145700_v2.0.a1
pyrus_communis pycom05g19650
rosa_chinensis RchiOBHm_Chr5g0027271
rosa_laevigata RLG00000033007
rosa_multiflora Rmu_sc0001503.1_g000006
rosa_roxburghii Rroxscaffold_1G00052220 Rroxscaffold_4G00329160
rosa_rugosa Rorug05G0098000
rosa_samantha Rh5AG192100 Rh5BG189800 Rh5CG210200 Rh5DG191800
rosa_wichuraiana Rw5G017490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2455
Acc36I ACCTGC 3 cut(s) 1273, 1476, 2455
AccB7I CCANNNNNTGG 1 cut(s) 1481
AccII CGCG 2 cut(s) 979, 2529
AciI CCGC 6 cut(s) 231, 587, 932, 977, 979, 2527
AclWI GGATC 6 cut(s) 122, 721, 823, 2303, 2379, 2909
AcoI YGGCCR 1 cut(s) 232
AcsI RAATTY 7 cut(s) 154, 290, 595, 1127, 1188, 1902, 2086
AcuI CTGAAG 2 cut(s) 881, 1745
AfaI GTAC 6 cut(s) 925, 1538, 1636, 2366, 2441, 2627
AfiI CCNNNNNNNGG 9 cut(s) 546, 586, 770, 1202, 1481, 1553, 1596, 2354, 2924
AflIII ACRYGT 3 cut(s) 1233, 2325, 2821
AgeI ACCGGT 1 cut(s) 749
AhdI GACNNNNNGTC 1 cut(s) 2782
AjiI CACGTC 1 cut(s) 2326
AjnI CCWGG 3 cut(s) 15, 544, 2367
AloI GAACNNNNNNTCC 2 cut(s) 1747, 1779
Alw21I GWGCWC 1 cut(s) 1858
Alw26I GTCTC 3 cut(s) 203, 261, 1377
AlwI GGATC 6 cut(s) 122, 721, 823, 2303, 2379, 2909
AlwNI CAGNNNCTG 1 cut(s) 2918
Ama87I CYCGRG 1 cut(s) 1178
AoxI GGCC 3 cut(s) 232, 319, 1843
ApeKI GCWGC 6 cut(s) 1072, 1075, 1567, 2219, 2520, 2720
ApoI RAATTY 7 cut(s) 154, 290, 595, 1127, 1188, 1902, 2086
ArsI GACNNNNNNTTYG 4 cut(s) 1307, 1339, 2861, 2893
AsiGI ACCGGT 1 cut(s) 749
Asp700I GAANNNNTTC 2 cut(s) 1443, 1670
AspA2I CCTAGG 2 cut(s) 689, 2644
AspLEI GCGC 2 cut(s) 2280, 2531
AspS9I GGNCC 5 cut(s) 320, 608, 1463, 1774, 1843
AsuC2I CCSGG 1 cut(s) 1688
AsuHPI GGTGA 9 cut(s) 5, 95, 476, 1007, 1910, 1982, 2003, 2479, 2588
AsuII TTCGAA 2 cut(s) 1023, 2084
AvaI CYCGRG 1 cut(s) 1178
AvaII GGWCC 3 cut(s) 608, 1463, 1774
AvrII CCTAGG 2 cut(s) 689, 2644
AxyI CCTNAGG 3 cut(s) 428, 474, 581
BaeGI GKGCMC 1 cut(s) 2494
BauI CACGAG 1 cut(s) 1617
Bbv12I GWGCWC 1 cut(s) 1858
BbvCI CCTCAGC 1 cut(s) 1220
BbvI GCAGC 6 cut(s) 1062, 1084, 1579, 2206, 2532, 2732
BccI CCATC 4 cut(s) 1741, 1795, 2068, 2453
BceAI ACGGC 1 cut(s) 219
BciT130I CCWGG 3 cut(s) 17, 546, 2369
BciVI GTATCC 1 cut(s) 1749
BclI TGATCA 1 cut(s) 2668
BcnI CCSGG 1 cut(s) 1688
BcoDI GTCTC 3 cut(s) 203, 261, 1377
BfmI CTRYAG 4 cut(s) 1076, 1643, 1859, 2142
BfuAI ACCTGC 3 cut(s) 1273, 1476, 2455
BfuI GTATCC 1 cut(s) 1749
BisI GCNGC 7 cut(s) 232, 1073, 1076, 1568, 2220, 2521, 2721
BlnI CCTAGG 2 cut(s) 689, 2644
BlpI GCTNAGC 1 cut(s) 2000
BlsI GCNGC 7 cut(s) 233, 1074, 1077, 1569, 2221, 2522, 2722
Bme1390I CCNGG 4 cut(s) 17, 546, 1688, 2369
Bme18I GGWCC 3 cut(s) 608, 1463, 1774
BmeRI GACNNNNNGTC 1 cut(s) 2782
BmeT110I CYCGRG 1 cut(s) 1178
BmgBI CACGTC 1 cut(s) 2326
BmgT120I GGNCC 5 cut(s) 320, 608, 1463, 1774, 1843
BmiI GGNNCC 5 cut(s) 538, 609, 759, 1775, 2425
BmrFI CCNGG 4 cut(s) 17, 546, 1688, 2369
BmrI ACTGGG 2 cut(s) 1706, 1850
BmsI GCATC 3 cut(s) 814, 1365, 2220
BmuI ACTGGG 2 cut(s) 1706, 1850
BplI GAGNNNNNCTC 2 cut(s) 1600, 1632
BpmI CTGGAG 3 cut(s) 987, 1458, 1698
Bpu10I CCTNAGC 2 cut(s) 1220, 2486
Bpu1102I GCTNAGC 1 cut(s) 2000
Bpu14I TTCGAA 2 cut(s) 1023, 2084
BpuEI CTTGAG 3 cut(s) 185, 719, 1271
BpuMI CCSGG 1 cut(s) 1688
BsaBI GATNNNNATC 1 cut(s) 1173
BsaWI WCCGGW 1 cut(s) 749
BsaXI ACNNNNNCTCC 4 cut(s) 1574, 1604, 2496, 2526
Bsc4I CCNNNNNNNGG 9 cut(s) 546, 586, 770, 1202, 1481, 1553, 1596, 2354, 2924
Bse118I RCCGGY 1 cut(s) 749
Bse21I CCTNAGG 3 cut(s) 428, 474, 581
Bse3DI GCAATG 2 cut(s) 2560, 2904
Bse8I GATNNNNATC 1 cut(s) 1173
BseBI CCWGG 3 cut(s) 17, 546, 2369
BseGI GGATG 4 cut(s) 1156, 1827, 2079, 2809
BseJI GATNNNNATC 1 cut(s) 1173
BseLI CCNNNNNNNGG 9 cut(s) 546, 586, 770, 1202, 1481, 1553, 1596, 2354, 2924
BseMI GCAATG 2 cut(s) 2560, 2904
BseRI GAGGAG 3 cut(s) 491, 518, 1185
BseSI GKGCMC 1 cut(s) 2494
BseX3I CGGCCG 1 cut(s) 232
BseXI GCAGC 6 cut(s) 1062, 1084, 1579, 2206, 2532, 2732
BseYI CCCAGC 1 cut(s) 1624
BsgI GTGCAG 2 cut(s) 1251, 2131
Bsh1236I CGCG 2 cut(s) 979, 2529
Bsh1285I CGRYCG 1 cut(s) 235
BshFI GGCC 3 cut(s) 234, 321, 1845
BshTI ACCGGT 1 cut(s) 749
BsiEI CGRYCG 1 cut(s) 235
BsiHKAI GWGCWC 1 cut(s) 1858
BsiHKCI CYCGRG 1 cut(s) 1178
BsiSI CCGG 2 cut(s) 750, 1688
BslFI GGGAC 2 cut(s) 1787, 1934
BslI CCNNNNNNNGG 9 cut(s) 546, 586, 770, 1202, 1481, 1553, 1596, 2354, 2924
BsmAI GTCTC 3 cut(s) 203, 261, 1377
BsmFI GGGAC 2 cut(s) 1787, 1934
BsmI GAATGC 2 cut(s) 1224, 1611
BsnI GGCC 3 cut(s) 234, 321, 1845
BsoBI CYCGRG 1 cut(s) 1178
Bsp119I TTCGAA 2 cut(s) 1023, 2084
Bsp1286I GDGCHC 2 cut(s) 1858, 2494
Bsp1407I TGTACA 2 cut(s) 1634, 2439
Bsp1720I GCTNAGC 1 cut(s) 2000
BspACI CCGC 6 cut(s) 231, 587, 932, 977, 979, 2527
BspANI GGCC 3 cut(s) 234, 321, 1845
BspFNI CGCG 2 cut(s) 979, 2529
BspLI GGNNCC 5 cut(s) 538, 609, 759, 1775, 2425
BspMAI CTGCAG 2 cut(s) 1080, 2146
BspMI ACCTGC 3 cut(s) 1273, 1476, 2455
BspPI GGATC 6 cut(s) 122, 721, 823, 2303, 2379, 2909
BspT104I TTCGAA 2 cut(s) 1023, 2084
BsrDI GCAATG 2 cut(s) 2560, 2904
BsrFI RCCGGY 1 cut(s) 749
BsrGI TGTACA 2 cut(s) 1634, 2439
BssAI RCCGGY 1 cut(s) 749
BssSI CACGAG 1 cut(s) 1617
BssT1I CCWWGG 7 cut(s) 207, 689, 834, 1201, 1306, 2545, 2644
Bst2BI CACGAG 1 cut(s) 1617
Bst2UI CCWGG 3 cut(s) 17, 546, 2369
Bst4CI ACNGT 6 cut(s) 347, 1214, 1512, 2047, 2437, 2774
Bst6I CTCTTC 1 cut(s) 1025
BstAPI GCANNNNNTGC 1 cut(s) 1375
BstAUI TGTACA 2 cut(s) 1634, 2439
BstBI TTCGAA 2 cut(s) 1023, 2084
BstC8I GCNNGC 3 cut(s) 798, 2756, 2890
BstDSI CCRYGG 1 cut(s) 977
BstENI CCTNNNNNAGG 1 cut(s) 1594
BstF5I GGATG 4 cut(s) 1156, 1827, 2079, 2809
BstFNI CGCG 2 cut(s) 979, 2529
BstHHI GCGC 2 cut(s) 2280, 2531
BstMAI GTCTC 3 cut(s) 203, 261, 1377
BstMCI CGRYCG 1 cut(s) 235
BstMWI GCNNNNNNNGC 8 cut(s) 802, 1375, 1648, 2118, 2453, 2526, 2717, 2898
BstNI CCWGG 3 cut(s) 17, 546, 2369
BstNSI RCATGY 3 cut(s) 1237, 1356, 2825
BstSCI CCNGG 4 cut(s) 15, 544, 1686, 2367
BstSFI CTRYAG 4 cut(s) 1076, 1643, 1859, 2142
BstSLI GKGCMC 1 cut(s) 2494
BstUI CGCG 2 cut(s) 979, 2529
BstV1I GCAGC 6 cut(s) 1062, 1084, 1579, 2206, 2532, 2732
BstX2I RGATCY 3 cut(s) 2308, 2371, 2914
BstXI CCANNNNNNTGG 2 cut(s) 893, 965
BstYI RGATCY 3 cut(s) 2308, 2371, 2914
BstZI CGGCCG 1 cut(s) 232
Bsu36I CCTNAGG 3 cut(s) 428, 474, 581
BsuI GTATCC 1 cut(s) 1749
BsuRI GGCC 3 cut(s) 234, 321, 1845
BtgI CCRYGG 1 cut(s) 977
BtgZI GCGATG 2 cut(s) 2200, 2285
BtrI CACGTC 1 cut(s) 2326
BtsCI GGATG 4 cut(s) 1156, 1827, 2079, 2809
BtsIMutI CAGTG 4 cut(s) 531, 634, 1674, 2433
BveI ACCTGC 3 cut(s) 1273, 1476, 2455
Cac8I GCNNGC 3 cut(s) 798, 2756, 2890
CaiI CAGNNNCTG 1 cut(s) 2918
CfoI GCGC 2 cut(s) 2280, 2531
Cfr10I RCCGGY 1 cut(s) 749
Cfr13I GGNCC 5 cut(s) 320, 608, 1463, 1774, 1843
Cfr42I CCGCGG 1 cut(s) 980
Csp6I GTAC 6 cut(s) 924, 1537, 1635, 2365, 2440, 2626
CspAI ACCGGT 1 cut(s) 749
CviAII CATG 8 cut(s) 389, 1147, 1234, 1353, 2629, 2660, 2822, 2875
CviQI GTAC 6 cut(s) 924, 1537, 1635, 2365, 2440, 2626
DriI GACNNNNNGTC 1 cut(s) 2782
EaeI YGGCCR 1 cut(s) 232
EagI CGGCCG 1 cut(s) 232
Eam1104I CTCTTC 1 cut(s) 1025
Eam1105I GACNNNNNGTC 1 cut(s) 2782
EarI CTCTTC 1 cut(s) 1025
EclXI CGGCCG 1 cut(s) 232
Eco130I CCWWGG 7 cut(s) 207, 689, 834, 1201, 1306, 2545, 2644
Eco32I GATATC 2 cut(s) 1938, 2538
Eco47I GGWCC 3 cut(s) 608, 1463, 1774
Eco52I CGGCCG 1 cut(s) 232
Eco57I CTGAAG 2 cut(s) 881, 1745
Eco81I CCTNAGG 3 cut(s) 428, 474, 581
Eco88I CYCGRG 1 cut(s) 1178
EcoNI CCTNNNNNAGG 1 cut(s) 1594
EcoO109I RGGNCCY 2 cut(s) 1463, 1774
EcoRI GAATTC 2 cut(s) 154, 290
EcoRII CCWGG 3 cut(s) 15, 544, 2367
EcoRV GATATC 2 cut(s) 1938, 2538
EcoT14I CCWWGG 7 cut(s) 207, 689, 834, 1201, 1306, 2545, 2644
ErhI CCWWGG 7 cut(s) 207, 689, 834, 1201, 1306, 2545, 2644
FaeI CATG 8 cut(s) 392, 1150, 1237, 1356, 2632, 2663, 2825, 2878
FaqI GGGAC 2 cut(s) 1787, 1934
FatI CATG 8 cut(s) 388, 1146, 1233, 1352, 2628, 2659, 2821, 2874
FauI CCCGC 2 cut(s) 580, 972
FauNDI CATATG 1 cut(s) 2896
FbaI TGATCA 1 cut(s) 2668
Fnu4HI GCNGC 7 cut(s) 232, 1073, 1076, 1568, 2220, 2521, 2721
FokI GGATG 4 cut(s) 1163, 1814, 2086, 2816
Fsp4HI GCNGC 7 cut(s) 232, 1073, 1076, 1568, 2220, 2521, 2721
GlaI GCGC 2 cut(s) 2279, 2530
GluI GCNGC 7 cut(s) 232, 1073, 1076, 1568, 2220, 2521, 2721
GsaI CCCAGC 1 cut(s) 1628
GsuI CTGGAG 3 cut(s) 987, 1458, 1698
HaeIII GGCC 3 cut(s) 234, 321, 1845
HapII CCGG 2 cut(s) 750, 1688
HhaI GCGC 2 cut(s) 2280, 2531
Hin1II CATG 8 cut(s) 392, 1150, 1237, 1356, 2632, 2663, 2825, 2878
Hin6I GCGC 2 cut(s) 2278, 2529
HinP1I GCGC 2 cut(s) 2278, 2529
HincII GTYRAC 1 cut(s) 963
HindII GTYRAC 1 cut(s) 963
HindIII AAGCTT 2 cut(s) 1247, 1727
HpaI GTTAAC 1 cut(s) 963
HpaII CCGG 2 cut(s) 750, 1688
HphI GGTGA 9 cut(s) 5, 95, 476, 1007, 1910, 1982, 2003, 2479, 2588
Hpy166II GTNNAC 4 cut(s) 911, 963, 2440, 2770
Hpy8I GTNNAC 4 cut(s) 911, 963, 2440, 2770
HpyAV CCTTC 8 cut(s) 671, 1031, 1588, 2344, 2348, 2412, 2495, 2720
HpyCH4III ACNGT 6 cut(s) 347, 1214, 1512, 2047, 2437, 2774
HpyCH4IV ACGT 1 cut(s) 2325
HpyF10VI GCNNNNNNNGC 8 cut(s) 802, 1375, 1648, 2118, 2453, 2526, 2717, 2898
HpySE526I ACGT 1 cut(s) 2325
Hsp92II CATG 8 cut(s) 392, 1150, 1237, 1356, 2632, 2663, 2825, 2878
HspAI GCGC 2 cut(s) 2278, 2529
Ksp22I TGATCA 1 cut(s) 2668
KspAI GTTAAC 1 cut(s) 963
KspI CCGCGG 1 cut(s) 980
LmnI GCTCC 9 cut(s) 505, 542, 694, 1054, 1205, 1608, 2169, 2423, 2717
Lsp1109I GCAGC 6 cut(s) 1062, 1084, 1579, 2206, 2532, 2732
LweI GCATC 3 cut(s) 814, 1365, 2220
MaeII ACGT 1 cut(s) 2325
MaeIII GTNAC 9 cut(s) 134, 211, 660, 989, 1214, 1573, 1823, 2594, 2774
MboII GAAGA 6 cut(s) 266, 304, 874, 1012, 2073, 2318
MfeI CAATTG 1 cut(s) 1160
MflI RGATCY 3 cut(s) 2308, 2371, 2914
MhlI GDGCHC 2 cut(s) 1858, 2494
MlyI GAGTC 3 cut(s) 178, 978, 2597
MmeI TCCRAC 3 cut(s) 161, 1617, 2310
MroXI GAANNNNTTC 2 cut(s) 1443, 1670
MseI TTAA 4 cut(s) 306, 746, 962, 1347
MslI CAYNNNNRTG 3 cut(s) 416, 2658, 2664
MspA1I CMGCKG 4 cut(s) 231, 859, 979, 1075
MspI CCGG 2 cut(s) 750, 1688
MspR9I CCNGG 4 cut(s) 17, 546, 1688, 2369
MunI CAATTG 1 cut(s) 1160
Mva1269I GAATGC 2 cut(s) 1224, 1611
MvaI CCWGG 3 cut(s) 17, 546, 2369
MvnI CGCG 2 cut(s) 979, 2529
MwoI GCNNNNNNNGC 8 cut(s) 802, 1375, 1648, 2118, 2453, 2526, 2717, 2898
NciI CCSGG 1 cut(s) 1688
NdeI CATATG 1 cut(s) 2896
NlaIII CATG 8 cut(s) 392, 1150, 1237, 1356, 2632, 2663, 2825, 2878
NlaIV GGNNCC 5 cut(s) 538, 609, 759, 1775, 2425
NmuCI GTSAC 4 cut(s) 660, 1573, 2594, 2774
NspI RCATGY 3 cut(s) 1237, 1356, 2825
NspV TTCGAA 2 cut(s) 1023, 2084
PaeR7I CTCGAG 1 cut(s) 1178
PaqCI CACCTGC 1 cut(s) 2455
PciI ACATGT 2 cut(s) 1233, 2821
PctI GAATGC 2 cut(s) 1224, 1611
PdmI GAANNNNTTC 2 cut(s) 1443, 1670
PfeI GAWTC 9 cut(s) 39, 361, 667, 1455, 1711, 1975, 2078, 2232, 2245
PflFI GACNNNGTC 1 cut(s) 1778
PflMI CCANNNNNTGG 1 cut(s) 1481
PfoI TCCNGGA 1 cut(s) 1686
PinAI ACCGGT 1 cut(s) 749
PkrI GCNGC 7 cut(s) 233, 1074, 1077, 1569, 2221, 2522, 2722
PleI GAGTC 3 cut(s) 177, 977, 2597
PpsI GAGTC 3 cut(s) 177, 977, 2597
PpuMI RGGWCCY 2 cut(s) 1463, 1774
PscI ACATGT 2 cut(s) 1233, 2821
Psp5II RGGWCCY 2 cut(s) 1463, 1774
Psp6I CCWGG 3 cut(s) 15, 544, 2367
PspFI CCCAGC 1 cut(s) 1624
PspGI CCWGG 3 cut(s) 15, 544, 2367
PspN4I GGNNCC 5 cut(s) 538, 609, 759, 1775, 2425
PspPI GGNCC 5 cut(s) 320, 608, 1463, 1774, 1843
PspPPI RGGWCCY 2 cut(s) 1463, 1774
PstI CTGCAG 2 cut(s) 1080, 2146
PstNI CAGNNNCTG 1 cut(s) 2918
PsuI RGATCY 3 cut(s) 2308, 2371, 2914
PsyI GACNNNGTC 1 cut(s) 1778
PvuII CAGCTG 2 cut(s) 859, 1075
RsaI GTAC 6 cut(s) 925, 1538, 1636, 2366, 2441, 2627
RsaNI GTAC 6 cut(s) 924, 1537, 1635, 2365, 2440, 2626
RseI CAYNNNNRTG 3 cut(s) 416, 2658, 2664
SacII CCGCGG 1 cut(s) 980
SaqAI TTAA 4 cut(s) 306, 746, 962, 1347
SatI GCNGC 7 cut(s) 232, 1073, 1076, 1568, 2220, 2521, 2721
Sau96I GGNCC 5 cut(s) 320, 608, 1463, 1774, 1843
SchI GAGTC 3 cut(s) 178, 978, 2597
ScrFI CCNGG 4 cut(s) 17, 546, 1688, 2369
SduI GDGCHC 2 cut(s) 1858, 2494
SfaNI GCATC 3 cut(s) 814, 1365, 2220
SfcI CTRYAG 4 cut(s) 1076, 1643, 1859, 2142
Sfr274I CTCGAG 1 cut(s) 1178
Sfr303I CCGCGG 1 cut(s) 980
SfuI TTCGAA 2 cut(s) 1023, 2084
SgrBI CCGCGG 1 cut(s) 980
SinI GGWCC 3 cut(s) 608, 1463, 1774
SlaI CTCGAG 1 cut(s) 1178
SmiMI CAYNNNNRTG 3 cut(s) 416, 2658, 2664
SmlI CTYRAG 4 cut(s) 200, 698, 1178, 1250
SmoI CTYRAG 4 cut(s) 200, 698, 1178, 1250
SsiI CCGC 6 cut(s) 231, 587, 932, 977, 979, 2527
SspI AATATT 2 cut(s) 1333, 2569
StyD4I CCNGG 4 cut(s) 15, 544, 1686, 2367
StyI CCWWGG 7 cut(s) 207, 689, 834, 1201, 1306, 2545, 2644
TaaI ACNGT 6 cut(s) 347, 1214, 1512, 2047, 2437, 2774
TaiI ACGT 1 cut(s) 2328
TaqI TCGA 5 cut(s) 592, 1023, 1179, 2084, 2514
TatI WGTACW 3 cut(s) 1634, 2439, 2625
TauI GCSGC 1 cut(s) 234
TfiI GAWTC 9 cut(s) 39, 361, 667, 1455, 1711, 1975, 2078, 2232, 2245
Tru1I TTAA 4 cut(s) 306, 746, 962, 1347
Tru9I TTAA 4 cut(s) 306, 746, 962, 1347
TscAI CASTG 4 cut(s) 538, 634, 1681, 2440
TseFI GTSAC 4 cut(s) 660, 1573, 2594, 2774
TseI GCWGC 6 cut(s) 1072, 1075, 1567, 2219, 2520, 2720
Tsp45I GTSAC 4 cut(s) 660, 1573, 2594, 2774
TspDTI ATGAA 6 cut(s) 377, 926, 2178, 2224, 2288, 2820
TspGWI ACGGA 1 cut(s) 2182
TspRI CASTG 4 cut(s) 538, 634, 1681, 2440
Tth111I GACNNNGTC 1 cut(s) 1778
Van91I CCANNNNNTGG 1 cut(s) 1481
VpaK11BI GGWCC 3 cut(s) 608, 1463, 1774
XagI CCTNNNNNAGG 1 cut(s) 1594
XapI RAATTY 7 cut(s) 154, 290, 595, 1127, 1188, 1902, 2086
XbaI TCTAGA 4 cut(s) 355, 364, 1123, 2683
XceI RCATGY 3 cut(s) 1237, 1356, 2825
XhoI CTCGAG 1 cut(s) 1178
XmaJI CCTAGG 2 cut(s) 689, 2644
XmnI GAANNNNTTC 2 cut(s) 1443, 1670
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.