FvH4_3g16920

Pentatricopeptide repeat-containing protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Reverse (-)
10666442 .. 10668481
2040 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g16920.t1

Sequence Viewer

Length: 2040 bp
ATGTCAACAAAACTCAAAACTACAACCAACCTTTTCCATGGACACATCCTCAACTACAGCTTCCCTCGTTACAACTTAAGCTGCTCATATGTGTCTACTCAAGCATTCCAAACCAGAAAAGTTGCTGCTAGCAGCTTTCTTGTTTTCTGCAACTCCCAGATCACCAAAAGTGGAAGAAATGGTGATCTCAAACAAGCAGAGTCGATATTCAATCGCATGCCATCTAAGGACACCATTACCTGGACTGCCATGCTCACTGCATACGCTGAAAATGGCCAAACCAGGTTGGCACGCAAGATGTTCGATGAAATGCCCCAACGAAACGTAGCGTCGTATAATGCGATGATGACAGCTTATATTAGGAGCAAAGGTAATGTAGATGAAGCTTATCAGTTGTTTTATGTAATGCCTGAGCGTAATGCCGTGTCTTATATTGTAATGATCACTGGTTTCGTAAAGGCGGGGATGTTCGACCAGGCTGAGAGGATATACTGTAGTTTGCCGGTTAAGTGGCGAGAGCCAGTTTGTTCAAATGTGTTGTTAAATGGGTATCTGAAGGCTGGGAGGATTGAAGAGGCGGTGAGAGTTTTTGAGGGAATGTCAAAGAGGAATGTGGTTTCTCAGAGTTGTATGGTTGATGGGTATTGCAAAGTAGGAAGGATTGGTGATGCTGGAAATCTGTTTGATGTGATGGTGGAGAGGACTGTGGTTACTTGGACGGCAATGATTGATGGGTACATGAAGAATGGAATGTTTGAGATGGGTTTTGAGTTGTTTTTGGATATGAGAAGGGAGGGGATAGTGGAGGTCAATTCCATTACCATGAGCATAATGTTTGAAGCTTGCGGTGGTTTTGGGAGACGTGGAGAAGGGTTTCAGATGCACGGGTTAGTTTCTCGAATGGGATTCGATTATGATGTCTTTTTAGGAAATTCTGCTATCATTATGTATTGCAGGTTTGGTTTTGTAGATGAAGCTACTAAGATATTACATATGATGAGCAACAAAAATATAGTTTCCTGGAATTCCTTAATTGCAGGTTATGTTCAATGTGCCGAAATTGAAGTAGCTTTTAAACTGTTTGAGATGATGCCTGAAAAGGATGTAGTTACATGGACGGTCTTGATATCAGGATTCTCAAGCAAGGGCATGACTAAGAAAGCCATCCAATTGTTTTTGTTGATGCCTGACAAGGATGATGTTGCTTGGACTGCTCTAGTTTCAGGTTTTGTAAATAATGAGGAATATGTGGAGGCTCTCTGTTGGTTTATCAAGATGCTTCGGAGCACAATCAAGCCTAATCCACTTACTTTGAGCAGTGTGCTCAGTGCTTCAGCCAGTTTGGCCGCTTTAAATGAGGGGATGCAGATCCATTCTTTTTCACTGAAGGTGAATATGGAATGTAATTTATCTGTTCAAAATGCTCTGGTCTCAATGTATTCAAAGTGTGGAAATGTCATTGATGCCAGTCGGATCTTCACAAATATCGTTTCACCCAATACTGTTTCATTCAACTCCATGATTACTGGCTTTGCCCAAAATGGTTTTGGGGAAGAAGCCCTGAACTTGTTTTGGAGCATGCAGAATGAAGGTTGTGAGCCCAACCAAATCACGTTTCTGGGTGTTCTTTCAGCTTGTGTCCATGTTGGATTAGTAAAAGAAGGACGGCAGTTTTTTTATTCGATGCAATCATTACACAACATAGAACCAGGACCAGATCACTATGCTTGCATGGTTGATCTCCTTGGACGATCTGGTTTGCTCGATGAAGCTGTTGAGTTGATTTATTCAATGCCATTTGAGCCACATGCTGGGGTTTGGGGAGCTCTTCTTAGTGCTAGCAGGACTCATTTACGTCCTGATCTTGCAGAGCTTGCAAGTAGGCACCTGATCAAATCGGAGCCTGATAATGCAGCCCCTTATGTGGTTCTATCCAATATATATTCTTCTTTAGGGAAAGTGAAGGATGAAGACCAAGTGAGGATGACCAAGAAAACAAAAGGGGTAAAGAAGAGTCCAGGCTGCAGCTGGGTTACATAG

Protein Analysis

680

Amino Acids

75.9

Weight (kDa)

7.48

Isoelectric Point (pI)

40.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 76 - 109 6.9e-07 PPR repeat family
PPR PF01535 79 - 109 2.7e-06 PPR repeat
PPR_2 PF13041 175 - 205 5.1e-06 PPR repeat family
PPR_2 PF13041 235 - 282 8.7e-13 PPR repeat family
PPR PF01535 237 - 267 1.4e-09 PPR repeat
PPR_2 PF13041 336 - 368 1.4e-06 PPR repeat family
PPR PF01535 370 - 398 9.1e-06 PPR repeat
PPR_2 PF13041 399 - 444 3.1e-06 PPR repeat family
PPR_3 PF13812 498 - 547 8.8e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 499 - 547 1e-11 PPR repeat family
PPR PF01535 502 - 532 7.8e-08 PPR repeat
E_motif PF20431 621 - 678 9.4e-14 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014592)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53600 AT1G53600
fragaria_vesca FvH4_3g16920
malus_domestica MD03G1255800.v1.1
prunus_persica Prupe.4G151400_v2.0.a1
pyrus_communis pycom03g20240
rosa_chinensis RchiOBHm_Chr5g0028141
rosa_laevigata RLG00000033071
rosa_multiflora Rmu_co8381305.1_g000001 Rmu_sc0002598.1_g000012
rosa_roxburghii Rroxscaffold_1G00051540
rosa_rugosa Rorug05G0104400
rosa_samantha Rh5AG197600 Rh5BG196200 Rh5CG216200 Rh5DG197900
rosa_wichuraiana Rw5G018060

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 945, 1028
AccB1I GGYRCC 1 cut(s) 1884
AccB7I CCANNNNNTGG 2 cut(s) 240, 1811
AccI GTMKAC 1 cut(s) 95
AciI CCGC 4 cut(s) 461, 578, 846, 1347
AclWI GGATC 2 cut(s) 1363, 1481
AcoI YGGCCR 2 cut(s) 274, 1344
AcsI RAATTY 2 cut(s) 931, 1024
AcuI CTGAAG 3 cut(s) 575, 1317, 1406
AfaI GTAC 1 cut(s) 737
AfiI CCNNNNNNNGG 3 cut(s) 240, 1811, 1924
AflII CTTAAG 1 cut(s) 76
AjiI CACGTC 1 cut(s) 863
AjnI CCWGG 6 cut(s) 239, 281, 474, 1019, 1708, 2017
AjuI GAANNNNNNNTTGG 2 cut(s) 1599, 1631
Alw21I GWGCWC 3 cut(s) 1289, 1326, 1828
Alw26I GTCTC 2 cut(s) 853, 1435
AlwI GGATC 2 cut(s) 1363, 1481
AoxI GGCC 2 cut(s) 274, 1344
ApeKI GCWGC 6 cut(s) 81, 125, 132, 1913, 2022, 2025
ApoI RAATTY 2 cut(s) 931, 1024
Asp700I GAANNNNTTC 1 cut(s) 873
AspS9I GGNCC 1 cut(s) 1712
AsuHPI GGTGA 6 cut(s) 154, 194, 592, 677, 1402, 1485
AsuNHI GCTAGC 2 cut(s) 128, 1838
AvaII GGWCC 1 cut(s) 1712
BalI TGGCCA 1 cut(s) 276
BanI GGYRCC 1 cut(s) 1884
BanII GRGCYC 2 cut(s) 1602, 1828
BbsI GAAGAC 1 cut(s) 1977
Bbv12I GWGCWC 3 cut(s) 1289, 1326, 1828
BbvI GCAGC 5 cut(s) 68, 112, 144, 1925, 2009
BccI CCATC 6 cut(s) 229, 632, 685, 725, 754, 1172
BceAI ACGGC 3 cut(s) 407, 735, 1682
BcgI CGANNNNNNTGC 2 cut(s) 283, 317
BciT130I CCWGG 6 cut(s) 241, 283, 476, 1021, 1710, 2019
BclI TGATCA 2 cut(s) 441, 1890
BcoDI GTCTC 2 cut(s) 853, 1435
BfaI CTAG 3 cut(s) 129, 1217, 1839
BfmI CTRYAG 3 cut(s) 55, 493, 2023
BfrI CTTAAG 1 cut(s) 76
BfuAI ACCTGC 2 cut(s) 945, 1028
BglI GCCNNNNNGGC 1 cut(s) 1343
BisI GCNGC 7 cut(s) 82, 126, 133, 1347, 1914, 2023, 2026
BlsI GCNGC 7 cut(s) 83, 127, 134, 1348, 1915, 2024, 2027
Bme1390I CCNGG 6 cut(s) 241, 283, 476, 1021, 1710, 2019
Bme18I GGWCC 1 cut(s) 1712
BmgBI CACGTC 1 cut(s) 863
BmgT120I GGNCC 1 cut(s) 1712
BmiI GGNNCC 2 cut(s) 1886, 1902
BmrFI CCNGG 6 cut(s) 241, 283, 476, 1021, 1710, 2019
BmsI GCATC 8 cut(s) 658, 870, 1080, 1173, 1266, 1353, 1453, 1674
BmtI GCTAGC 2 cut(s) 132, 1842
BpiI GAAGAC 1 cut(s) 1977
Bpu10I CCTNAGC 1 cut(s) 411
BpuEI CTTGAG 2 cut(s) 84, 1123
BsaBI GATNNNNATC 1 cut(s) 1367
BsaI GGTCTC 1 cut(s) 1435
BsaJI CCNNGG 2 cut(s) 37, 1744
BsaXI ACNNNNNCTCC 2 cut(s) 355, 385
Bsc4I CCNNNNNNNGG 3 cut(s) 240, 1811, 1924
Bse118I RCCGGY 1 cut(s) 502
Bse1I ACTGG 5 cut(s) 451, 521, 1338, 1467, 1531
Bse3DI GCAATG 1 cut(s) 729
Bse8I GATNNNNATC 1 cut(s) 1367
BseBI CCWGG 6 cut(s) 241, 283, 476, 1021, 1710, 2019
BseDI CCNNGG 2 cut(s) 37, 1744
BseGI GGATG 8 cut(s) 45, 471, 1108, 1164, 1201, 1368, 1972, 1989
BseJI GATNNNNATC 1 cut(s) 1367
BseLI CCNNNNNNNGG 3 cut(s) 240, 1811, 1924
BseMI GCAATG 1 cut(s) 729
BseMII CTCAG 4 cut(s) 402, 471, 635, 1339
BseNI ACTGG 5 cut(s) 451, 521, 1338, 1467, 1531
BseXI GCAGC 5 cut(s) 68, 112, 144, 1925, 2009
BseYI CCCAGC 3 cut(s) 560, 1811, 2028
BshFI GGCC 2 cut(s) 276, 1346
BshNI GGYRCC 1 cut(s) 1884
BsiHKAI GWGCWC 3 cut(s) 1289, 1326, 1828
BsiSI CCGG 1 cut(s) 503
BslI CCNNNNNNNGG 3 cut(s) 240, 1811, 1924
BsmAI GTCTC 2 cut(s) 853, 1435
BsmBI CGTCTC 1 cut(s) 853
BsmI GAATGC 1 cut(s) 104
BsnI GGCC 2 cut(s) 276, 1346
Bso31I GGTCTC 1 cut(s) 1435
Bsp1286I GDGCHC 4 cut(s) 1289, 1326, 1602, 1828
Bsp19I CCATGG 1 cut(s) 37
BspACI CCGC 4 cut(s) 461, 578, 846, 1347
BspANI GGCC 2 cut(s) 276, 1346
BspCNI CTCAG 4 cut(s) 403, 472, 634, 1338
BspLI GGNNCC 2 cut(s) 1886, 1902
BspMAI CTGCAG 1 cut(s) 2027
BspMI ACCTGC 2 cut(s) 945, 1028
BspOI GCTAGC 2 cut(s) 132, 1842
BspPI GGATC 2 cut(s) 1363, 1481
BspQI GCTCTTC 1 cut(s) 1833
BspT107I GGYRCC 1 cut(s) 1884
BspTI CTTAAG 1 cut(s) 76
BspTNI GGTCTC 1 cut(s) 1435
BsrDI GCAATG 1 cut(s) 729
BsrFI RCCGGY 1 cut(s) 502
BsrI ACTGG 5 cut(s) 451, 521, 1338, 1467, 1531
BssAI RCCGGY 1 cut(s) 502
BssECI CCNNGG 2 cut(s) 37, 1744
BssT1I CCWWGG 2 cut(s) 37, 1744
Bst2UI CCWGG 6 cut(s) 241, 283, 476, 1021, 1710, 2019
Bst4CI ACNGT 5 cut(s) 494, 706, 1080, 1120, 1504
Bst6I CTCTTC 3 cut(s) 567, 1833, 2006
BstAFI CTTAAG 1 cut(s) 76
BstAPI GCANNNNNTGC 1 cut(s) 1874
BstC8I GCNNGC 8 cut(s) 130, 218, 292, 844, 1580, 1729, 1840, 1875
BstDEI CTNAG 8 cut(s) 225, 411, 480, 621, 981, 1155, 1325, 1832
BstDSI CCRYGG 1 cut(s) 37
BstF5I GGATG 8 cut(s) 45, 471, 1108, 1164, 1201, 1368, 1972, 1989
BstMAI GTCTC 2 cut(s) 853, 1435
BstMWI GCNNNNNNNGC 4 cut(s) 1211, 1343, 1801, 1874
BstNI CCWGG 6 cut(s) 241, 283, 476, 1021, 1710, 2019
BstNSI RCATGY 3 cut(s) 220, 1582, 1811
BstSCI CCNGG 6 cut(s) 239, 281, 474, 1019, 1708, 2017
BstSFI CTRYAG 3 cut(s) 55, 493, 2023
BstV1I GCAGC 5 cut(s) 68, 112, 144, 1925, 2009
BstV2I GAAGAC 1 cut(s) 1977
BstX2I RGATCY 2 cut(s) 1368, 1473
BstYI RGATCY 2 cut(s) 1368, 1473
BsuRI GGCC 2 cut(s) 276, 1346
BtgI CCRYGG 1 cut(s) 37
BtgZI GCGATG 1 cut(s) 356
BtrI CACGTC 1 cut(s) 863
BtsCI GGATG 8 cut(s) 45, 471, 1108, 1164, 1201, 1368, 1972, 1989
BtsI GCAGTG 2 cut(s) 255, 1324
BtsIMutI CAGTG 5 cut(s) 255, 444, 1324, 1333, 1382
BveI ACCTGC 2 cut(s) 945, 1028
Cac8I GCNNGC 8 cut(s) 130, 218, 292, 844, 1580, 1729, 1840, 1875
Cfr10I RCCGGY 1 cut(s) 502
Cfr13I GGNCC 1 cut(s) 1712
CseI GACGC 1 cut(s) 318
CsiI ACCWGGT 1 cut(s) 281
Csp6I GTAC 1 cut(s) 736
CspCI CAANNNNNGTGG 2 cut(s) 1293, 1328
CviQI GTAC 1 cut(s) 736
DdeI CTNAG 8 cut(s) 225, 411, 480, 621, 981, 1155, 1325, 1832
DraI TTTAAA 2 cut(s) 1075, 1353
EaeI YGGCCR 2 cut(s) 274, 1344
Eam1104I CTCTTC 3 cut(s) 567, 1833, 2006
EarI CTCTTC 3 cut(s) 567, 1833, 2006
Ecl136II GAGCTC 1 cut(s) 1826
Eco130I CCWWGG 2 cut(s) 37, 1744
Eco24I GRGCYC 2 cut(s) 1602, 1828
Eco31I GGTCTC 1 cut(s) 1435
Eco32I GATATC 1 cut(s) 1128
Eco47I GGWCC 1 cut(s) 1712
Eco53kI GAGCTC 1 cut(s) 1826
Eco57I CTGAAG 3 cut(s) 575, 1317, 1406
EcoICRI GAGCTC 1 cut(s) 1826
EcoRI GAATTC 1 cut(s) 1024
EcoRII CCWGG 6 cut(s) 239, 281, 474, 1019, 1708, 2017
EcoRV GATATC 1 cut(s) 1128
EcoT14I CCWWGG 2 cut(s) 37, 1744
EcoT38I GRGCYC 2 cut(s) 1602, 1828
ErhI CCWWGG 2 cut(s) 37, 1744
Esp3I CGTCTC 1 cut(s) 853
FauI CCCGC 1 cut(s) 454
FauNDI CATATG 2 cut(s) 88, 993
FbaI TGATCA 2 cut(s) 441, 1890
FblI GTMKAC 1 cut(s) 95
Fnu4HI GCNGC 7 cut(s) 82, 126, 133, 1347, 1914, 2023, 2026
FokI GGATG 8 cut(s) 32, 478, 1115, 1151, 1208, 1375, 1979, 1996
FriOI GRGCYC 2 cut(s) 1602, 1828
Fsp4HI GCNGC 7 cut(s) 82, 126, 133, 1347, 1914, 2023, 2026
FspBI CTAG 3 cut(s) 129, 1217, 1839
GluI GCNGC 7 cut(s) 82, 126, 133, 1347, 1914, 2023, 2026
GsaI CCCAGC 3 cut(s) 564, 1815, 2032
HaeIII GGCC 2 cut(s) 276, 1346
HapII CCGG 1 cut(s) 503
HgaI GACGC 1 cut(s) 318
HincII GTYRAC 1 cut(s) 6
HindII GTYRAC 1 cut(s) 6
HindIII AAGCTT 2 cut(s) 384, 840
HinfI GANTC 5 cut(s) 200, 906, 1134, 1846, 2014
HpaII CCGG 1 cut(s) 503
HphI GGTGA 6 cut(s) 154, 194, 592, 677, 1402, 1485
Hpy166II GTNNAC 2 cut(s) 6, 96
Hpy188I TCNGA 6 cut(s) 555, 624, 879, 1284, 1473, 1900
Hpy188III TCNNGA 5 cut(s) 897, 1123, 1131, 1273, 1859
Hpy8I GTNNAC 2 cut(s) 6, 96
Hpy99I CGWCG 1 cut(s) 334
HpyAV CCTTC 8 cut(s) 550, 651, 783, 863, 1381, 1583, 1655, 1957
HpyCH4III ACNGT 5 cut(s) 494, 706, 1080, 1120, 1504
HpyCH4IV ACGT 4 cut(s) 324, 862, 1613, 1855
HpyF10VI GCNNNNNNNGC 4 cut(s) 1211, 1343, 1801, 1874
HpyF3I CTNAG 8 cut(s) 225, 411, 480, 621, 981, 1155, 1325, 1832
HpySE526I ACGT 4 cut(s) 324, 862, 1613, 1855
Ksp22I TGATCA 2 cut(s) 441, 1890
LguI GCTCTTC 1 cut(s) 1833
LmnI GCTCC 5 cut(s) 363, 1284, 1575, 1823, 1900
Lsp1109I GCAGC 5 cut(s) 68, 112, 144, 1925, 2009
LweI GCATC 8 cut(s) 658, 870, 1080, 1173, 1266, 1353, 1453, 1674
MabI ACCWGGT 1 cut(s) 281
MaeI CTAG 3 cut(s) 129, 1217, 1839
MaeII ACGT 4 cut(s) 324, 862, 1613, 1855
MaeIII GTNAC 4 cut(s) 68, 709, 1108, 2032
MboII GAAGA 9 cut(s) 186, 584, 754, 1468, 1565, 1820, 1938, 1982, 2023
MfeI CAATTG 1 cut(s) 1169
MflI RGATCY 2 cut(s) 1368, 1473
MhlI GDGCHC 4 cut(s) 1289, 1326, 1602, 1828
MlsI TGGCCA 1 cut(s) 276
MluCI AATT 7 cut(s) 811, 931, 1024, 1032, 1059, 1169, 1405
MluNI TGGCCA 1 cut(s) 276
MlyI GAGTC 3 cut(s) 209, 1840, 2023
MmeI TCCRAC 2 cut(s) 1451, 1627
Mox20I TGGCCA 1 cut(s) 276
MroXI GAANNNNTTC 1 cut(s) 873
MscI TGGCCA 1 cut(s) 276
MseI TTAA 6 cut(s) 77, 507, 542, 1031, 1074, 1352
MslI CAYNNNNRTG 1 cut(s) 821
Msp20I TGGCCA 1 cut(s) 276
MspA1I CMGCKG 1 cut(s) 2028
MspCI CTTAAG 1 cut(s) 76
MspI CCGG 1 cut(s) 503
MspR9I CCNGG 6 cut(s) 241, 283, 476, 1021, 1710, 2019
MunI CAATTG 1 cut(s) 1169
Mva1269I GAATGC 1 cut(s) 104
MvaI CCWGG 6 cut(s) 241, 283, 476, 1021, 1710, 2019
MwoI GCNNNNNNNGC 4 cut(s) 1211, 1343, 1801, 1874
NcoI CCATGG 1 cut(s) 37
NdeI CATATG 2 cut(s) 88, 993
NheI GCTAGC 2 cut(s) 128, 1838
NlaIV GGNNCC 2 cut(s) 1886, 1902
NspI RCATGY 3 cut(s) 220, 1582, 1811
PaeI GCATGC 2 cut(s) 220, 1582
PciSI GCTCTTC 1 cut(s) 1833
PcsI WCGNNNNNNNCGW 1 cut(s) 338
PctI GAATGC 1 cut(s) 104
PdmI GAANNNNTTC 1 cut(s) 873
PfeI GAWTC 2 cut(s) 906, 1134
PflMI CCANNNNNTGG 2 cut(s) 240, 1811
PfoI TCCNGGA 1 cut(s) 1019
PkrI GCNGC 7 cut(s) 83, 127, 134, 1348, 1915, 2024, 2027
PleI GAGTC 3 cut(s) 208, 1840, 2022
PpsI GAGTC 3 cut(s) 208, 1840, 2022
Psp124BI GAGCTC 1 cut(s) 1828
Psp6I CCWGG 6 cut(s) 239, 281, 474, 1019, 1708, 2017
PspFI CCCAGC 3 cut(s) 560, 1811, 2028
PspGI CCWGG 6 cut(s) 239, 281, 474, 1019, 1708, 2017
PspN4I GGNNCC 2 cut(s) 1886, 1902
PspPI GGNCC 1 cut(s) 1712
PstI CTGCAG 1 cut(s) 2027
PsuI RGATCY 2 cut(s) 1368, 1473
PvuII CAGCTG 1 cut(s) 2028
RsaI GTAC 1 cut(s) 737
RsaNI GTAC 1 cut(s) 736
RseI CAYNNNNRTG 1 cut(s) 821
SacI GAGCTC 1 cut(s) 1828
SapI GCTCTTC 1 cut(s) 1833
SaqAI TTAA 6 cut(s) 77, 507, 542, 1031, 1074, 1352
SatI GCNGC 7 cut(s) 82, 126, 133, 1347, 1914, 2023, 2026
Sau96I GGNCC 1 cut(s) 1712
SchI GAGTC 3 cut(s) 209, 1840, 2023
ScrFI CCNGG 6 cut(s) 241, 283, 476, 1021, 1710, 2019
SduI GDGCHC 4 cut(s) 1289, 1326, 1602, 1828
SexAI ACCWGGT 1 cut(s) 281
SfaNI GCATC 8 cut(s) 658, 870, 1080, 1173, 1266, 1353, 1453, 1674
SfcI CTRYAG 3 cut(s) 55, 493, 2023
SinI GGWCC 1 cut(s) 1712
SmiMI CAYNNNNRTG 1 cut(s) 821
SmlI CTYRAG 3 cut(s) 76, 99, 1138
SmoI CTYRAG 3 cut(s) 76, 99, 1138
SphI GCATGC 2 cut(s) 220, 1582
Sse9I AATT 7 cut(s) 811, 931, 1024, 1032, 1059, 1169, 1405
SsiI CCGC 4 cut(s) 461, 578, 846, 1347
SspMI CTAG 3 cut(s) 129, 1217, 1839
SstI GAGCTC 1 cut(s) 1828
StyD4I CCNGG 6 cut(s) 239, 281, 474, 1019, 1708, 2017
StyI CCWWGG 2 cut(s) 37, 1744
TaaI ACNGT 5 cut(s) 494, 706, 1080, 1120, 1504
TaiI ACGT 4 cut(s) 327, 865, 1616, 1858
TaqI TCGA 7 cut(s) 203, 303, 471, 898, 909, 1682, 1764
TasI AATT 7 cut(s) 811, 931, 1024, 1032, 1059, 1169, 1405
TauI GCSGC 1 cut(s) 1349
TfiI GAWTC 2 cut(s) 906, 1134
Tru1I TTAA 6 cut(s) 77, 507, 542, 1031, 1074, 1352
Tru9I TTAA 6 cut(s) 77, 507, 542, 1031, 1074, 1352
TscAI CASTG 5 cut(s) 262, 451, 1324, 1333, 1389
TseI GCWGC 6 cut(s) 81, 125, 132, 1913, 2022, 2025
TspDTI ATGAA 8 cut(s) 321, 396, 755, 987, 1497, 1602, 1782, 1983
TspRI CASTG 5 cut(s) 262, 451, 1324, 1333, 1389
Van91I CCANNNNNTGG 2 cut(s) 240, 1811
Vha464I CTTAAG 1 cut(s) 76
VpaK11BI GGWCC 1 cut(s) 1712
XapI RAATTY 2 cut(s) 931, 1024
XceI RCATGY 3 cut(s) 220, 1582, 1811
XcmI CCANNNNNNNNNTGG 2 cut(s) 1544, 2025
XmiI GTMKAC 1 cut(s) 95
XmnI GAANNNNTTC 1 cut(s) 873
XspI CTAG 3 cut(s) 129, 1217, 1839
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.