Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0014592

Physical Location & Seq

Genomic Coordinates Reverse (-)

22029669 .. 22034517

Gene Structure 4849 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG197900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2196 bp

ATGCCAACAAAACTCCAAACTACAACCAACCTTTTCCATAAACACATCCTCAACTATAGCTTCCCACGTTATAAGGCTCGCTGCTCATATTTGTCTACTCAAGCATACTATGACTTTCAAAGCAGAAAAGCTAGCAGCTTTCTTGTTTACTGCAACTCCCAAATCACTAAAAGTGGAAGAAATGGTGATCTCAAACAAGCAGAGTCGATTTTCAATCGTATGCCAACTAAGGACACTATCACCTGGACTGCCATGCTGACTGCATATGCAGAGAATGGCCAAACTAGCTTGGCACGCAAGGTGTTCGATGAAATGCCCCAACGAAACGTAGCATCATATAATGCGATGATCACGGGTTATATTCGGAGCAAAGGTAATGTAGATGAAGCTTTTGGGTTGTTTTGTACGATGCCTGAGCGTAATGTGGTGTCTTATAGTGTGATGATCACTGGTTTCGCAAAGGCGTGGATGTTCGACGAGGCTGAGAGGCTTTACTGTGAGATGCCAGTTCAGTGGCGGGAACCGGTTTGTTCAAATGCGTTGATAAATGGGTATTTGAAGGCGGGAAGAATCGAAGAGGCGGTTAGAGTTTTCGAGGGAATGTCAGAGAGAAATGTGGTTTCTGAGAGTTGCATGGTTGATGGGTATTGCAAACTGGGAAGGATTGATGATGCTAGAAATTTGTTTGATGTGATGCTGGGGAGGACTGTGGTTACTTGGACGGCAATGATTGATGGGTACATGAAGAAGGGAATGTTCGAAAGGGGTTTTGAATTGTTTTCGGATATGAGAAGGGAGGGGATAGTGGAGGTCAATTCCACTACCATGAGCATAATGTTTGACGCTTGTGGTGCTTTTGGTAGATGTGGAGAAGGGATTCAGATGCACGGGTTAGTTTCCCGAATGGGATTTGATTATGATGTCTTTTTAGGAAATTCTATTATCATTATGTATTGTAGGTTTGGTTTTGTAGATGAAGCTACTAAGATAATACGTATGATGAGGAAGACAAATATAGTTTCCTGGAATTCCTTAATTGCAGGTTATGTTCAATGTGCCGAAGTTGAAGTAGCTTTTAAACTGTTTGAGATGATGCCTGAAAAGGATGTAGTTTCATGGACGACCATGATATCAGGATTCTCAAGCAAGGGCATGACTAGGAAAGCCATCCAATTGTTTTTGTTGATGCCTAAGAAGGATGATGTTGCTTGGACTGCTCTAGTTTCAGGTTTTGTAAATAATGAGGAATATGAGGAAGCTCTCCATTGGTTTATCAAGATGCTTCGGAAAACAACCAGGCCTAATCCACTTACTTTGAGCAGTGTGCTCAGTGCTTCAGCCAGTTTGGCCGCTCTAAATGAGGGGATGCAGATCCATTCTTTTTCACTGAAGGTGAATATGGAAAATAATTTATCTGTTCGAAATGCTCTGGTCTCAATGTATTCAAAGTGTGGGAATGTCATTGATGCCAATCGGATCTTCACAAGTATCTTTTCACCCAATACTGTTTCATTCAACTCCATGATTACTGGGTTTGCCCAAAATGGTTTTGGGGAAGAAGCCCTGAACTTGTTTTGGAGCATGCAGAATGAAGGTTGCGAGCCAAACCAAATCACATTTCTGGGTGTTCTTTCAGCTTGTGTCCATGTGGGACTAGTAAAAGAAGGACGGCAGTTTTTTAATTCGATGCAATCATTGCACCACATAGAACCAGGACCGGATCACTATGCTTGCATGGTTGATCTCCTTGGACGATCTGGCTTGCTAGATGAAGCTGTCGAGTTGATTCATTCAATGCCATTTGAGCCCCATGCTGGGGTTTGGGGAGCTCTTCTTGGTGCTAGCAGGGCTCATTTACGTCTTGATCTTGCAGAGCTTGCAACTCAGCACCTGATCAAATTGGAGCCTGATAATGCAACCCCTTATGTGGTTTTATCCAATATATATTCTACTTTAGGGAAAGTGAAGGATGGAGACCAAGTGAGGATGACCAAGAATTCAAAAGGGATAAGGAAGAGTCCAGGCTGCAGCTGGGTTACATTGAAGGACAAGGTTCATTTATTTCTTGCAGGAGATCAATCCCATCAGGACTTCCAAGATATTGAAGTGATACTCTGGATCATAACAATGGAAATAGGACAGCTAGCTGGATCGTCCAAAGGTGATCATTCTTTGAATTGTTTTCTGCATCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1900864 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

731

Amino Acids

82.23

Weight (kDa)

6.64

Isoelectric Point (pI)

35.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	77 - 110	1.1e-06	PPR repeat family
PPR	PF01535	80 - 110	4.2e-06	PPR repeat
PPR_2	PF13041	108 - 142	7.1e-07	PPR repeat family
PPR	PF01535	143 - 168	5e-06	PPR repeat
PPR_2	PF13041	176 - 206	3.6e-06	PPR repeat family
PPR	PF01535	177 - 206	1.8e-06	PPR repeat
PPR_1	PF12854	205 - 232	4.7e-06	PPR repeat
PPR_2	PF13041	236 - 283	1.3e-13	PPR repeat family
PPR	PF01535	238 - 268	2.7e-09	PPR repeat
PPR_2	PF13041	338 - 369	1.6e-06	PPR repeat family
PPR	PF01535	340 - 369	1e-05	PPR repeat
PPR	PF01535	371 - 399	2.4e-06	PPR repeat
PPR_2	PF13041	400 - 445	8.8e-07	PPR repeat family
PPR_2	PF13041	500 - 548	1.1e-11	PPR repeat family
PPR	PF01535	503 - 533	8.5e-08	PPR repeat
E_motif	PF20431	621 - 679	3.6e-15	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0014592)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53600 AT1G53600
fragaria_vesca	FvH4_3g16920
malus_domestica	MD03G1255800.v1.1
prunus_persica	Prupe.4G151400_v2.0.a1
pyrus_communis	pycom03g20240
rosa_chinensis	RchiOBHm_Chr5g0028141
rosa_laevigata	RLG00000033071
rosa_multiflora	Rmu_co8381305.1_g000001 Rmu_sc0002598.1_g000012
rosa_roxburghii	Rroxscaffold_1G00051540
rosa_rugosa	Rorug05G0104400
rosa_samantha	Rh5AG197600 Rh5BG196200 Rh5CG216200 Rh5DG197900
rosa_wichuraiana	Rw5G018060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	72
Acc36I	ACCTGC	1 cut(s)	1031
AccBSI	CCGCTC	1 cut(s)	1352
AccI	GTMKAC	1 cut(s)	95
AciI	CCGC	4 cut(s)	517, 563, 581, 1350
AclWI	GGATC	5 cut(s)	1366, 1484, 1728, 2126, 2158
AcoI	YGGCCR	2 cut(s)	277, 1347
AcsI	RAATTY	4 cut(s)	679, 934, 1027, 1996
AcuI	CTGAAG	2 cut(s)	1320, 1409
AfaI	GTAC	2 cut(s)	406, 740
AfiI	CCNNNNNNNGG	4 cut(s)	1814, 1815, 1816, 1927
AgeI	ACCGGT	1 cut(s)	523
AhlI	ACTAGT	1 cut(s)	1654
AjnI	CCWGG	5 cut(s)	242, 1022, 1295, 1711, 2020
AjuI	GAANNNNNNNTTGG	4 cut(s)	1463, 1495, 1602, 1634
Alw21I	GWGCWC	2 cut(s)	1329, 1831
Alw26I	GTCTC	2 cut(s)	1438, 1968
AlwI	GGATC	5 cut(s)	1366, 1484, 1728, 2126, 2158
AlwNI	CAGNNNCTG	1 cut(s)	1891
AoxI	GGCC	3 cut(s)	277, 1298, 1347
ApeKI	GCWGC	4 cut(s)	81, 135, 2025, 2028
ApoI	RAATTY	4 cut(s)	679, 934, 1027, 1996
AsiGI	ACCGGT	1 cut(s)	523
Asp700I	GAANNNNTTC	1 cut(s)	876
AspS9I	GGNCC	1 cut(s)	1715
AsuHPI	GGTGA	5 cut(s)	197, 232, 1405, 1488, 2174
AsuII	TTCGAA	2 cut(s)	759, 1420
AsuNHI	GCTAGC	3 cut(s)	131, 1841, 2143
AvaII	GGWCC	1 cut(s)	1715
BalI	TGGCCA	1 cut(s)	279
BanII	GRGCYC	3 cut(s)	1809, 1831, 1852
BbsI	GAAGAC	1 cut(s)	1013
Bbv12I	GWGCWC	2 cut(s)	1329, 1831
BbvI	GCAGC	4 cut(s)	68, 147, 2012, 2040
BccI	CCATC	5 cut(s)	635, 728, 1175, 1964, 2091
BceAI	ACGGC	2 cut(s)	738, 1685
BcgI	CGANNNNNNTGC	2 cut(s)	286, 320
BciT130I	CCWGG	5 cut(s)	244, 1024, 1297, 1713, 2022
BclI	TGATCA	4 cut(s)	348, 444, 1893, 2164
BcoDI	GTCTC	2 cut(s)	1438, 1968
BcuI	ACTAGT	1 cut(s)	1654
BfaI	CTAG	9 cut(s)	132, 285, 675, 1158, 1220, 1655, 1766, 1842, 2144
BfmI	CTRYAG	2 cut(s)	55, 2026
BfuAI	ACCTGC	1 cut(s)	1031
BglI	GCCNNNNNGGC	1 cut(s)	1346
BisI	GCNGC	5 cut(s)	82, 136, 1350, 2026, 2029
BlsI	GCNGC	5 cut(s)	83, 137, 1351, 2027, 2030
Bme1390I	CCNGG	5 cut(s)	244, 1024, 1297, 1713, 2022
Bme18I	GGWCC	1 cut(s)	1715
BmgT120I	GGNCC	1 cut(s)	1715
BmiI	GGNNCC	2 cut(s)	522, 1905
BmrFI	CCNGG	5 cut(s)	244, 1024, 1297, 1713, 2022
BmrI	ACTGGG	2 cut(s)	665, 1539
BmtI	GCTAGC	3 cut(s)	135, 1845, 2147
BmuI	ACTGGG	2 cut(s)	665, 1539
BpiI	GAAGAC	1 cut(s)	1013
Bpu10I	CCTNAGC	1 cut(s)	414
Bpu14I	TTCGAA	2 cut(s)	759, 1420
BpuEI	CTTGAG	2 cut(s)	84, 1126
BsaAI	YACGTR	1 cut(s)	995
BsaBI	GATNNNNATC	2 cut(s)	1370, 1470
BsaI	GGTCTC	2 cut(s)	1438, 1968
BsaJI	CCNNGG	1 cut(s)	1747
BsaWI	WCCGGW	2 cut(s)	523, 1717
BsaXI	ACNNNNNCTCC	6 cut(s)	140, 170, 358, 388, 1965, 1995
Bsc4I	CCNNNNNNNGG	4 cut(s)	1814, 1815, 1816, 1927
Bse118I	RCCGGY	1 cut(s)	523
Bse1I	ACTGG	5 cut(s)	454, 506, 660, 1341, 1534
Bse3DI	GCAATG	2 cut(s)	732, 1694
Bse8I	GATNNNNATC	2 cut(s)	1370, 1470
BseBI	CCWGG	5 cut(s)	244, 1024, 1297, 1713, 2022
BseDI	CCNNGG	1 cut(s)	1747
BseGI	GGATG	8 cut(s)	45, 474, 1111, 1167, 1204, 1371, 1975, 1992
BseJI	GATNNNNATC	2 cut(s)	1370, 1470
BseLI	CCNNNNNNNGG	4 cut(s)	1814, 1815, 1816, 1927
BseMI	GCAATG	2 cut(s)	732, 1694
BseMII	CTCAG	5 cut(s)	405, 474, 615, 1342, 1898
BseNI	ACTGG	5 cut(s)	454, 506, 660, 1341, 1534
BseXI	GCAGC	4 cut(s)	68, 147, 2012, 2040
BseYI	CCCAGC	3 cut(s)	697, 1814, 2031
BshFI	GGCC	3 cut(s)	279, 1300, 1349
BshTI	ACCGGT	1 cut(s)	523
BsiHKAI	GWGCWC	2 cut(s)	1329, 1831
BsiSI	CCGG	2 cut(s)	524, 1718
BslFI	GGGAC	1 cut(s)	1665
BslI	CCNNNNNNNGG	4 cut(s)	1814, 1815, 1816, 1927
BsmAI	GTCTC	2 cut(s)	1438, 1968
BsmFI	GGGAC	1 cut(s)	1665
BsnI	GGCC	3 cut(s)	279, 1300, 1349
Bso31I	GGTCTC	2 cut(s)	1438, 1968
Bsp119I	TTCGAA	2 cut(s)	759, 1420
Bsp1286I	GDGCHC	4 cut(s)	1329, 1809, 1831, 1852
BspACI	CCGC	4 cut(s)	517, 563, 581, 1350
BspANI	GGCC	3 cut(s)	279, 1300, 1349
BspCNI	CTCAG	5 cut(s)	406, 475, 616, 1341, 1897
BspLI	GGNNCC	2 cut(s)	522, 1905
BspMAI	CTGCAG	1 cut(s)	2030
BspMI	ACCTGC	1 cut(s)	1031
BspOI	GCTAGC	3 cut(s)	135, 1845, 2147
BspPI	GGATC	5 cut(s)	1366, 1484, 1728, 2126, 2158
BspQI	GCTCTTC	1 cut(s)	1836
BspT104I	TTCGAA	2 cut(s)	759, 1420
BspTNI	GGTCTC	2 cut(s)	1438, 1968
BsrBI	CCGCTC	1 cut(s)	1352
BsrDI	GCAATG	2 cut(s)	732, 1694
BsrFI	RCCGGY	1 cut(s)	523
BsrI	ACTGG	5 cut(s)	454, 506, 660, 1341, 1534
BssAI	RCCGGY	1 cut(s)	523
BssECI	CCNNGG	1 cut(s)	1747
BssT1I	CCWWGG	1 cut(s)	1747
Bst2UI	CCWGG	5 cut(s)	244, 1024, 1297, 1713, 2022
Bst4CI	ACNGT	4 cut(s)	497, 709, 1083, 1507
Bst6I	CTCTTC	3 cut(s)	570, 1836, 2009
BstAPI	GCANNNNNTGC	2 cut(s)	1696, 1877
BstBAI	YACGTR	1 cut(s)	995
BstBI	TTCGAA	2 cut(s)	759, 1420
BstDEI	CTNAG	8 cut(s)	228, 414, 483, 624, 984, 1191, 1328, 1884
BstF5I	GGATG	8 cut(s)	45, 474, 1111, 1167, 1204, 1371, 1975, 1992
BstMAI	GTCTC	2 cut(s)	1438, 1968
BstMWI	GCNNNNNNNGC	9 cut(s)	285, 294, 851, 1214, 1346, 1696, 1804, 1847, 1877
BstNI	CCWGG	5 cut(s)	244, 1024, 1297, 1713, 2022
BstNSI	RCATGY	1 cut(s)	1585
BstSCI	CCNGG	5 cut(s)	242, 1022, 1295, 1711, 2020
BstSFI	CTRYAG	2 cut(s)	55, 2026
BstSNI	TACGTA	1 cut(s)	995
BstV1I	GCAGC	4 cut(s)	68, 147, 2012, 2040
BstV2I	GAAGAC	1 cut(s)	1013
BstX2I	RGATCY	2 cut(s)	1371, 1476
BstXI	CCANNNNNNTGG	1 cut(s)	513
BstYI	RGATCY	2 cut(s)	1371, 1476
BsuRI	GGCC	3 cut(s)	279, 1300, 1349
BtgZI	GCGATG	1 cut(s)	359
BtsCI	GGATG	8 cut(s)	45, 474, 1111, 1167, 1204, 1371, 1975, 1992
BtsI	GCAGTG	1 cut(s)	1327
BtsIMutI	CAGTG	5 cut(s)	447, 518, 1327, 1336, 1385
BveI	ACCTGC	1 cut(s)	1031
CaiI	CAGNNNCTG	1 cut(s)	1891
Cfr10I	RCCGGY	1 cut(s)	523
Cfr13I	GGNCC	1 cut(s)	1715
CseI	GACGC	1 cut(s)	851
Csp6I	GTAC	2 cut(s)	405, 739
CspAI	ACCGGT	1 cut(s)	523
CspCI	CAANNNNNGTGG	2 cut(s)	1296, 1331
CviQI	GTAC	2 cut(s)	405, 739
DdeI	CTNAG	8 cut(s)	228, 414, 483, 624, 984, 1191, 1328, 1884
DraI	TTTAAA	1 cut(s)	1078
EaeI	YGGCCR	2 cut(s)	277, 1347
Eam1104I	CTCTTC	3 cut(s)	570, 1836, 2009
EarI	CTCTTC	3 cut(s)	570, 1836, 2009
Ecl136II	GAGCTC	1 cut(s)	1829
Eco105I	TACGTA	1 cut(s)	995
Eco130I	CCWWGG	1 cut(s)	1747
Eco147I	AGGCCT	1 cut(s)	1300
Eco24I	GRGCYC	3 cut(s)	1809, 1831, 1852
Eco31I	GGTCTC	2 cut(s)	1438, 1968
Eco32I	GATATC	1 cut(s)	1131
Eco47I	GGWCC	1 cut(s)	1715
Eco53kI	GAGCTC	1 cut(s)	1829
Eco57I	CTGAAG	2 cut(s)	1320, 1409
EcoICRI	GAGCTC	1 cut(s)	1829
EcoRI	GAATTC	2 cut(s)	1027, 1996
EcoRII	CCWGG	5 cut(s)	242, 1022, 1295, 1711, 2020
EcoRV	GATATC	1 cut(s)	1131
EcoT14I	CCWWGG	1 cut(s)	1747
EcoT38I	GRGCYC	3 cut(s)	1809, 1831, 1852
ErhI	CCWWGG	1 cut(s)	1747
FaqI	GGGAC	1 cut(s)	1665
FauI	CCCGC	2 cut(s)	510, 556
FauNDI	CATATG	1 cut(s)	265
FbaI	TGATCA	4 cut(s)	348, 444, 1893, 2164
FblI	GTMKAC	1 cut(s)	95
Fnu4HI	GCNGC	5 cut(s)	82, 136, 1350, 2026, 2029
FokI	GGATG	8 cut(s)	32, 481, 1118, 1154, 1211, 1378, 1982, 1999
FriOI	GRGCYC	3 cut(s)	1809, 1831, 1852
Fsp4HI	GCNGC	5 cut(s)	82, 136, 1350, 2026, 2029
FspBI	CTAG	9 cut(s)	132, 285, 675, 1158, 1220, 1655, 1766, 1842, 2144
GluI	GCNGC	5 cut(s)	82, 136, 1350, 2026, 2029
GsaI	CCCAGC	3 cut(s)	701, 1818, 2035
HaeIII	GGCC	3 cut(s)	279, 1300, 1349
HapII	CCGG	2 cut(s)	524, 1718
HgaI	GACGC	1 cut(s)	851
HindIII	AAGCTT	1 cut(s)	387
HinfI	GANTC	6 cut(s)	203, 570, 877, 1137, 1786, 2017
HpaII	CCGG	2 cut(s)	524, 1718
HphI	GGTGA	5 cut(s)	197, 232, 1405, 1488, 2174
Hpy166II	GTNNAC	2 cut(s)	96, 148
Hpy188I	TCNGA	7 cut(s)	366, 607, 625, 784, 882, 1287, 1476
Hpy188III	TCNNGA	6 cut(s)	900, 1134, 1276, 1862, 2087, 2116
Hpy8I	GTNNAC	2 cut(s)	96, 148
Hpy99I	CGWCG	1 cut(s)	479
HpyCH4III	ACNGT	4 cut(s)	497, 709, 1083, 1507
HpyCH4IV	ACGT	4 cut(s)	67, 327, 994, 1858
HpyF10VI	GCNNNNNNNGC	9 cut(s)	285, 294, 851, 1214, 1346, 1696, 1804, 1847, 1877
HpyF3I	CTNAG	8 cut(s)	228, 414, 483, 624, 984, 1191, 1328, 1884
HpySE526I	ACGT	4 cut(s)	67, 327, 994, 1858
Ksp22I	TGATCA	4 cut(s)	348, 444, 1893, 2164
LguI	GCTCTTC	1 cut(s)	1836
LmnI	GCTCC	4 cut(s)	366, 1578, 1826, 1903
Lsp1109I	GCAGC	4 cut(s)	68, 147, 2012, 2040
MaeI	CTAG	9 cut(s)	132, 285, 675, 1158, 1220, 1655, 1766, 1842, 2144
MaeII	ACGT	4 cut(s)	67, 327, 994, 1858
MaeIII	GTNAC	2 cut(s)	712, 2035
MbiI	CCGCTC	1 cut(s)	1352
MboII	GAAGA	9 cut(s)	189, 579, 587, 757, 1018, 1471, 1568, 1823, 2026
MfeI	CAATTG	1 cut(s)	1172
MflI	RGATCY	2 cut(s)	1371, 1476
MhlI	GDGCHC	4 cut(s)	1329, 1809, 1831, 1852
MlsI	TGGCCA	1 cut(s)	279
MluNI	TGGCCA	1 cut(s)	279
MlyI	GAGTC	2 cut(s)	212, 2026
Mox20I	TGGCCA	1 cut(s)	279
MroXI	GAANNNNTTC	1 cut(s)	876
MscI	TGGCCA	1 cut(s)	279
MseI	TTAA	3 cut(s)	1034, 1077, 1680
MslI	CAYNNNNRTG	2 cut(s)	824, 2126
Msp20I	TGGCCA	1 cut(s)	279
MspA1I	CMGCKG	1 cut(s)	2031
MspI	CCGG	2 cut(s)	524, 1718
MspR9I	CCNGG	5 cut(s)	244, 1024, 1297, 1713, 2022
MunI	CAATTG	1 cut(s)	1172
MvaI	CCWGG	5 cut(s)	244, 1024, 1297, 1713, 2022
MwoI	GCNNNNNNNGC	9 cut(s)	285, 294, 851, 1214, 1346, 1696, 1804, 1847, 1877
NdeI	CATATG	1 cut(s)	265
NheI	GCTAGC	3 cut(s)	131, 1841, 2143
NlaIV	GGNNCC	2 cut(s)	522, 1905
NspI	RCATGY	1 cut(s)	1585
NspV	TTCGAA	2 cut(s)	759, 1420
PaeI	GCATGC	1 cut(s)	1585
PceI	AGGCCT	1 cut(s)	1300
PciSI	GCTCTTC	1 cut(s)	1836
PdmI	GAANNNNTTC	1 cut(s)	876
PfeI	GAWTC	4 cut(s)	570, 877, 1137, 1786
PfoI	TCCNGGA	1 cut(s)	1022
PinAI	ACCGGT	1 cut(s)	523
PkrI	GCNGC	5 cut(s)	83, 137, 1351, 2027, 2030
PleI	GAGTC	2 cut(s)	211, 2025
PpsI	GAGTC	2 cut(s)	211, 2025
Ppu21I	YACGTR	1 cut(s)	995
PsiI	TTATAA	1 cut(s)	72
Psp124BI	GAGCTC	1 cut(s)	1831
Psp6I	CCWGG	5 cut(s)	242, 1022, 1295, 1711, 2020
PspFI	CCCAGC	3 cut(s)	697, 1814, 2031
PspGI	CCWGG	5 cut(s)	242, 1022, 1295, 1711, 2020
PspN4I	GGNNCC	2 cut(s)	522, 1905
PspPI	GGNCC	1 cut(s)	1715
PstI	CTGCAG	1 cut(s)	2030
PstNI	CAGNNNCTG	1 cut(s)	1891
PsuI	RGATCY	2 cut(s)	1371, 1476
PvuII	CAGCTG	1 cut(s)	2031
RsaI	GTAC	2 cut(s)	406, 740
RsaNI	GTAC	2 cut(s)	405, 739
RseI	CAYNNNNRTG	2 cut(s)	824, 2126
SacI	GAGCTC	1 cut(s)	1831
SapI	GCTCTTC	1 cut(s)	1836
SaqAI	TTAA	3 cut(s)	1034, 1077, 1680
SatI	GCNGC	5 cut(s)	82, 136, 1350, 2026, 2029
Sau96I	GGNCC	1 cut(s)	1715
SchI	GAGTC	2 cut(s)	212, 2026
ScrFI	CCNGG	5 cut(s)	244, 1024, 1297, 1713, 2022
SduI	GDGCHC	4 cut(s)	1329, 1809, 1831, 1852
SfcI	CTRYAG	2 cut(s)	55, 2026
SfuI	TTCGAA	2 cut(s)	759, 1420
SinI	GGWCC	1 cut(s)	1715
SmiMI	CAYNNNNRTG	2 cut(s)	824, 2126
SmlI	CTYRAG	2 cut(s)	99, 1141
SmoI	CTYRAG	2 cut(s)	99, 1141
SnaBI	TACGTA	1 cut(s)	995
SpeI	ACTAGT	1 cut(s)	1654
SphI	GCATGC	1 cut(s)	1585
SseBI	AGGCCT	1 cut(s)	1300
SsiI	CCGC	4 cut(s)	517, 563, 581, 1350
SspMI	CTAG	9 cut(s)	132, 285, 675, 1158, 1220, 1655, 1766, 1842, 2144
SstI	GAGCTC	1 cut(s)	1831
StuI	AGGCCT	1 cut(s)	1300
StyD4I	CCNGG	5 cut(s)	242, 1022, 1295, 1711, 2020
StyI	CCWWGG	1 cut(s)	1747
TaaI	ACNGT	4 cut(s)	497, 709, 1083, 1507
TaiI	ACGT	4 cut(s)	70, 330, 997, 1861
TaqI	TCGA	9 cut(s)	206, 306, 474, 573, 594, 759, 1420, 1685, 1779
TauI	GCSGC	1 cut(s)	1352
TfiI	GAWTC	4 cut(s)	570, 877, 1137, 1786
Tru1I	TTAA	3 cut(s)	1034, 1077, 1680
Tru9I	TTAA	3 cut(s)	1034, 1077, 1680
TscAI	CASTG	5 cut(s)	454, 518, 1327, 1336, 1392
TseI	GCWGC	4 cut(s)	81, 135, 2025, 2028
TspRI	CASTG	5 cut(s)	454, 518, 1327, 1336, 1392
VpaK11BI	GGWCC	1 cut(s)	1715
XapI	RAATTY	4 cut(s)	679, 934, 1027, 1996
XceI	RCATGY	1 cut(s)	1585
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1547, 2028
XmiI	GTMKAC	1 cut(s)	95
XmnI	GAANNNNTTC	1 cut(s)	876
XspI	CTAG	9 cut(s)	132, 285, 675, 1158, 1220, 1655, 1766, 1842, 2144

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.