Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0014592

Physical Location & Seq

Genomic Coordinates Forward (+)

20757353 .. 20759509

Gene Structure 2157 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g20240.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2157 bp

ATGCCAACAATACTCAAAACCAGCATTTTCCATAAGTACTTTTCCAATTGTAGCTTTTCGCGTTGTAAGATCCACTGCTCGTATCTGTCCACTCAAGCCCAAAGCGTGTCCAAAAGCAGAAAAGCCAGCAGCTTTCTTGTTTACTGCAATTCCCAGATCACCCAAAACGGAAGAAATGGTGATATCAAACAAGCCGAATCAGTATTCAACCGCATGCCCGAGAAAAACACTATTTCCTGGACTGCTATGCTCACTGCATATGCCGAAAATGGCCAAACTTCCAAAGCACGTAAACTGTTCGATGAAATTCCCCAACGAAACATAGCATCGTATAATGCGATGATCACGGCTTATATTAGAAATAAATGTACGGTAGGTGAAGCTTTTGAGTTGTTTTCTGGGATGCCGGAGCGCAATGAGGTGTCTTATAGTGCCATGATCACGGGTTTTGTAAAGGCGGGGATGTTTGACAAGGCTGAGAAGCTTTACTGTGAAATGCCAGTAAGGTGGCGGGAACCGGTTTGTTCAAATGTTTTGATAAATGGGTATTTGAAGGTTGGAAGAACTGAAGACGCAGTTCGAGTTTTTGAGGGTATGGTAAATAGCAATGTGGTTTCTCAGAGCTGTATGGTTGATGGGTATTGCAAAATGGGAAGGATTGTTGATGCTAGAAATTTGTTTGATCAGATGCTGGAGAGGAATGTGGTTACTTGGACAGCACTGATTGATGGGTATATGAAGATGGGAATTTTCGAAGCCGGGTTTGAATTGTTCTTGGATATGAGTAGGGAAGGGCTAGTGAAGTTCAATAGCACTACAATGGCTGTAATGTTCGAAGCTTGTGGCAGTTTTGATAGATATCGAGAAGGGATTCAGATGCACGGGTTAGTTTCTCGTAAGGGGTTTGACTATGATGTCTTTTTAGGAAATTCTGTTATCATTATGTATTGTAGATTTGGTTGTATAGATGAAGCTTCTAAGGTATTTAATATGATGAACAAGAAAGATGTAGTTTCCTGGAATTCCTTAATTGCGGGTTATGTTCAATGTGCTGAAACTGAAGAAGCTTTTAGATTGTTTGAGGTGATGCCTGCAAAGGATATAGTATCATGGACGACCATGTTATCGGGATTCTCTTGCAAAGGGATGACTGAGAAAGCCATGGAGTTGTTCAAAATGATGCCTGAGAAGGATGATGTTGCCTGGACTGCCATAATTTCGGGTTTTGTAAATAATGGGCAATATGAAGAGGCTCTCATTTGGTTTATTCAGATGCGTCGAGAGGAAATCAGGATCAATCCCCTTACTTTGAGCAGTGCACTCAGTGCTTCTGCCAGTTTGGCCAGTATAAACGAGGGGATGCAGATCCATACTCTTTCATTTAAGATGGATATGGAGTTTGAATTATCCGTTCAAAATTCTCTGGTCTCTATGTATTCAAAGTGTGGGAACACTGTTGATGCCGATAGGATCTTCAGAAGTATCACTTCGCCCAATACTGTTTCATTCAACTCATTGATTACAGGGTTTGCGCAAAATGGGTTTGGTAAAGAAGCTCTTAACTTATTTCAGAGCATGCAGAATGAAGATTGCGAGCCAAACCAAATCACCTGTTTGGGTGTTCTTTCAGCCTGCGTCCACGTGGGACTAGTAGAAGAAGGATGGCAGTATTTTAATTCGATGAAATTGGAACACAATATAGAACCAGGACCGGATCACTATGCTTGCATGGTTGATCTCCTTGCTCGAGCTGGTTTGCTACATGAAGCTGTCGATTTGATTCATTCAATGCCATTTGAGCCCCATACCGGGGTTTGGGGAGCTCTTCTTAGTGCTAGCAGGACTCATTTATGTCTTGATCTTGCACAGCTTGCAACTCGGAAGCTAATCAGATTGGAGCCTGATGACGCGACCCCTTATGTGGTCTTGTCTAATTTATATTCTACTTTAGGGAAAATGAAGGATGGAAACCAAGTGATGATGACCAAAAAATCAAAGGGGATAAGGAAGAGTCCAGGCTGCAGCTGGATTACAGTGAAGGACAAGGTTCATTTGTTTCTTGCAGGAGATCAATCCCATTTGGACTCACAAGCAATTAAAGGATTACTCTCGATCATATCAATGGAAATGGAACAGCTACATTTTTATAGACGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1900864 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

719

Amino Acids

80.89

Weight (kDa)

6.43

Isoelectric Point (pI)

37.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	139 - 169	4.8e-06	PPR repeat family
PPR	PF01535	141 - 167	1.7e-07	PPR repeat
PPR_1	PF12854	202 - 230	3.2e-06	PPR repeat
PPR_2	PF13041	233 - 281	4.6e-09	PPR repeat family
PPR_2	PF13041	335 - 366	1.9e-06	PPR repeat family
PPR	PF01535	369 - 397	1.1e-07	PPR repeat
PPR_2	PF13041	398 - 443	2.6e-07	PPR repeat family
PPR	PF01535	400 - 429	5.1e-06	PPR repeat
PPR_2	PF13041	498 - 546	1.4e-10	PPR repeat family
PPR	PF01535	501 - 531	6.9e-07	PPR repeat
E_motif	PF20431	619 - 677	2.6e-13	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014592)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53600 AT1G53600
fragaria_vesca	FvH4_3g16920
malus_domestica	MD03G1255800.v1.1
prunus_persica	Prupe.4G151400_v2.0.a1
pyrus_communis	pycom03g20240
rosa_chinensis	RchiOBHm_Chr5g0028141
rosa_laevigata	RLG00000033071
rosa_multiflora	Rmu_co8381305.1_g000001 Rmu_sc0002598.1_g000012
rosa_roxburghii	Rroxscaffold_1G00051540
rosa_rugosa	Rorug05G0104400
rosa_samantha	Rh5AG197600 Rh5BG196200 Rh5CG216200 Rh5DG197900
rosa_wichuraiana	Rw5G018060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	914
Acc16I	TGCGCA	1 cut(s)	1533
AccII	CGCG	2 cut(s)	61, 1910
AciI	CCGC	4 cut(s)	211, 458, 511, 1034
AclWI	GGATC	5 cut(s)	64, 1301, 1360, 1478, 1722
AcoI	YGGCCR	2 cut(s)	271, 1341
AcsI	RAATTY	6 cut(s)	306, 673, 747, 928, 1021, 1417
AcuI	CTGAAG	3 cut(s)	588, 1080, 1459
AcvI	CACGTG	1 cut(s)	1642
AdeI	CACNNNGTG	1 cut(s)	1325
AfaI	GTAC	2 cut(s)	38, 370
AfiI	CCNNNNNNNGG	5 cut(s)	1808, 1809, 1810, 1815, 1921
AgeI	ACCGGT	1 cut(s)	517
AhlI	ACTAGT	1 cut(s)	1648
AjnI	CCWGG	5 cut(s)	236, 1016, 1202, 1705, 2014
Alw21I	GWGCWC	2 cut(s)	1321, 1825
Alw26I	GTCTC	1 cut(s)	1432
Alw44I	GTGCAC	1 cut(s)	1317
AlwI	GGATC	5 cut(s)	64, 1301, 1360, 1478, 1722
AlwNI	CAGNNNCTG	1 cut(s)	691
Ama87I	CYCGRG	2 cut(s)	218, 1746
AoxI	GGCC	2 cut(s)	271, 1341
ApaLI	GTGCAC	1 cut(s)	1317
ApeKI	GCWGC	3 cut(s)	129, 2019, 2022
ApoI	RAATTY	6 cut(s)	306, 673, 747, 928, 1021, 1417
AsiGI	ACCGGT	1 cut(s)	517
Asp700I	GAANNNNTTC	1 cut(s)	870
AspLEI	GCGC	2 cut(s)	414, 1534
AspS9I	GGNCC	1 cut(s)	1709
AsuC2I	CCSGG	2 cut(s)	760, 1810
AsuHPI	GGTGA	5 cut(s)	151, 191, 389, 1096, 1600
AsuII	TTCGAA	2 cut(s)	753, 834
AsuNHI	GCTAGC	1 cut(s)	1835
AvaI	CYCGRG	2 cut(s)	218, 1746
AvaII	GGWCC	1 cut(s)	1709
BaeGI	GKGCMC	1 cut(s)	1321
BalI	TGGCCA	2 cut(s)	273, 1343
BanII	GRGCYC	2 cut(s)	1803, 1825
BbrPI	CACGTG	1 cut(s)	1642
BbsI	GAAGAC	1 cut(s)	576
Bbv12I	GWGCWC	2 cut(s)	1321, 1825
BbvI	GCAGC	3 cut(s)	141, 2006, 2034
BccI	CCATC	6 cut(s)	629, 722, 736, 1381, 1656, 1958
BceAI	ACGGC	1 cut(s)	363
BciT130I	CCWGG	5 cut(s)	238, 1018, 1204, 1707, 2016
BclI	TGATCA	3 cut(s)	342, 438, 682
BcnI	CCSGG	2 cut(s)	760, 1810
BcoDI	GTCTC	1 cut(s)	1432
BcuI	ACTAGT	1 cut(s)	1648
BfaI	CTAG	4 cut(s)	669, 797, 1649, 1836
BfmI	CTRYAG	1 cut(s)	2020
BglI	GCCNNNNNGGC	1 cut(s)	1340
BisI	GCNGC	3 cut(s)	130, 2020, 2023
BlsI	GCNGC	3 cut(s)	131, 2021, 2024
BmcAI	AGTACT	1 cut(s)	38
Bme1390I	CCNGG	7 cut(s)	238, 760, 1018, 1204, 1707, 1810, 2016
Bme18I	GGWCC	1 cut(s)	1709
BmeT110I	CYCGRG	2 cut(s)	218, 1746
BmgT120I	GGNCC	1 cut(s)	1709
BmiI	GGNNCC	2 cut(s)	516, 1899
BmrFI	CCNGG	7 cut(s)	238, 760, 1018, 1204, 1707, 1810, 2016
BmtI	GCTAGC	1 cut(s)	1839
BpiI	GAAGAC	1 cut(s)	576
BpmI	CTGGAG	1 cut(s)	713
Bpu14I	TTCGAA	2 cut(s)	753, 834
BpuEI	CTTGAG	1 cut(s)	78
BpuMI	CCSGG	2 cut(s)	760, 1810
BsaAI	YACGTR	2 cut(s)	290, 1642
BsaBI	GATNNNNATC	2 cut(s)	858, 1364
BsaI	GGTCTC	1 cut(s)	1432
BsaJI	CCNNGG	2 cut(s)	1161, 1809
BsaWI	WCCGGW	2 cut(s)	517, 1711
Bsc4I	CCNNNNNNNGG	5 cut(s)	1808, 1809, 1810, 1815, 1921
Bse118I	RCCGGY	1 cut(s)	517
Bse1I	ACTGG	3 cut(s)	500, 1335, 1344
Bse3DI	GCAATG	2 cut(s)	421, 613
Bse8I	GATNNNNATC	2 cut(s)	858, 1364
BseBI	CCWGG	5 cut(s)	238, 1018, 1204, 1707, 2016
BseDI	CCNNGG	2 cut(s)	1161, 1809
BseGI	GGATG	7 cut(s)	408, 468, 1152, 1198, 1365, 1667, 1969
BseJI	GATNNNNATC	2 cut(s)	858, 1364
BseLI	CCNNNNNNNGG	5 cut(s)	1808, 1809, 1810, 1815, 1921
BseMI	GCAATG	2 cut(s)	421, 613
BseMII	CTCAG	5 cut(s)	468, 632, 1143, 1176, 1336
BseNI	ACTGG	3 cut(s)	500, 1335, 1344
BseSI	GKGCMC	1 cut(s)	1321
BseXI	GCAGC	3 cut(s)	141, 2006, 2034
Bsh1236I	CGCG	2 cut(s)	61, 1910
BshFI	GGCC	2 cut(s)	273, 1343
BshTI	ACCGGT	1 cut(s)	517
BsiHKAI	GWGCWC	2 cut(s)	1321, 1825
BsiHKCI	CYCGRG	2 cut(s)	218, 1746
BsiSI	CCGG	5 cut(s)	407, 518, 759, 1712, 1809
BslFI	GGGAC	1 cut(s)	1659
BslI	CCNNNNNNNGG	5 cut(s)	1808, 1809, 1810, 1815, 1921
BsmAI	GTCTC	1 cut(s)	1432
BsmFI	GGGAC	1 cut(s)	1659
BsnI	GGCC	2 cut(s)	273, 1343
Bso31I	GGTCTC	1 cut(s)	1432
BsoBI	CYCGRG	2 cut(s)	218, 1746
Bsp119I	TTCGAA	2 cut(s)	753, 834
Bsp1286I	GDGCHC	3 cut(s)	1321, 1803, 1825
Bsp19I	CCATGG	1 cut(s)	1161
BspACI	CCGC	4 cut(s)	211, 458, 511, 1034
BspANI	GGCC	2 cut(s)	273, 1343
BspCNI	CTCAG	5 cut(s)	469, 631, 1144, 1177, 1335
BspFNI	CGCG	2 cut(s)	61, 1910
BspLI	GGNNCC	2 cut(s)	516, 1899
BspMAI	CTGCAG	1 cut(s)	2024
BspOI	GCTAGC	1 cut(s)	1839
BspPI	GGATC	5 cut(s)	64, 1301, 1360, 1478, 1722
BspQI	GCTCTTC	1 cut(s)	1830
BspT104I	TTCGAA	2 cut(s)	753, 834
BspTNI	GGTCTC	1 cut(s)	1432
BsrDI	GCAATG	2 cut(s)	421, 613
BsrFI	RCCGGY	1 cut(s)	517
BsrI	ACTGG	3 cut(s)	500, 1335, 1344
BssAI	RCCGGY	1 cut(s)	517
BssECI	CCNNGG	2 cut(s)	1161, 1809
BssT1I	CCWWGG	1 cut(s)	1161
Bst2UI	CCWGG	5 cut(s)	238, 1018, 1204, 1707, 2016
Bst4CI	ACNGT	6 cut(s)	297, 373, 491, 1456, 1501, 2035
Bst6I	CTCTTC	3 cut(s)	1242, 1830, 2003
BstAPI	GCANNNNNTGC	2 cut(s)	1325, 1871
BstBAI	YACGTR	2 cut(s)	290, 1642
BstBI	TTCGAA	2 cut(s)	753, 834
BstC8I	GCNNGC	9 cut(s)	127, 215, 1092, 1577, 1595, 1633, 1726, 1837, 1872
BstDEI	CTNAG	7 cut(s)	477, 618, 978, 1152, 1185, 1322, 1829
BstDSI	CCRYGG	1 cut(s)	1161
BstF5I	GGATG	7 cut(s)	408, 468, 1152, 1198, 1365, 1667, 1969
BstFNI	CGCG	2 cut(s)	61, 1910
BstHHI	GCGC	2 cut(s)	414, 1534
BstMAI	GTCTC	1 cut(s)	1432
BstMWI	GCNNNNNNNGC	5 cut(s)	1208, 1325, 1340, 1798, 1871
BstNI	CCWGG	5 cut(s)	238, 1018, 1204, 1707, 2016
BstNSI	RCATGY	2 cut(s)	217, 1579
BstSCI	CCNGG	7 cut(s)	236, 758, 1016, 1202, 1705, 1808, 2014
BstSFI	CTRYAG	1 cut(s)	2020
BstSLI	GKGCMC	1 cut(s)	1321
BstUI	CGCG	2 cut(s)	61, 1910
BstV1I	GCAGC	3 cut(s)	141, 2006, 2034
BstV2I	GAAGAC	1 cut(s)	576
BstX2I	RGATCY	3 cut(s)	69, 1365, 1470
BstXI	CCANNNNNNTGG	1 cut(s)	507
BstYI	RGATCY	3 cut(s)	69, 1365, 1470
BsuRI	GGCC	2 cut(s)	273, 1343
BtgI	CCRYGG	1 cut(s)	1161
BtgZI	GCGATG	1 cut(s)	353
BtsCI	GGATG	7 cut(s)	408, 468, 1152, 1198, 1365, 1667, 1969
BtsI	GCAGTG	3 cut(s)	73, 252, 1321
BtsIMutI	CAGTG	7 cut(s)	73, 252, 719, 1321, 1330, 1452, 2040
Cac8I	GCNNGC	9 cut(s)	127, 215, 1092, 1577, 1595, 1633, 1726, 1837, 1872
CaiI	CAGNNNCTG	1 cut(s)	691
CfoI	GCGC	2 cut(s)	414, 1534
Cfr10I	RCCGGY	1 cut(s)	517
Cfr13I	GGNCC	1 cut(s)	1709
CseI	GACGC	4 cut(s)	581, 1265, 1624, 1916
Csp6I	GTAC	2 cut(s)	37, 369
CspAI	ACCGGT	1 cut(s)	517
CviAII	CATG	8 cut(s)	214, 436, 1110, 1120, 1162, 1576, 1729, 1763
CviQI	GTAC	2 cut(s)	37, 369
DdeI	CTNAG	7 cut(s)	477, 618, 978, 1152, 1185, 1322, 1829
DraIII	CACNNNGTG	1 cut(s)	1325
DrdI	GACNNNNNNGTC	1 cut(s)	914
DseDI	GACNNNNNNGTC	1 cut(s)	914
EaeI	YGGCCR	2 cut(s)	271, 1341
Eam1104I	CTCTTC	3 cut(s)	1242, 1830, 2003
EarI	CTCTTC	3 cut(s)	1242, 1830, 2003
Ecl136II	GAGCTC	1 cut(s)	1823
Eco130I	CCWWGG	1 cut(s)	1161
Eco24I	GRGCYC	2 cut(s)	1803, 1825
Eco31I	GGTCTC	1 cut(s)	1432
Eco32I	GATATC	2 cut(s)	184, 860
Eco47I	GGWCC	1 cut(s)	1709
Eco53kI	GAGCTC	1 cut(s)	1823
Eco57I	CTGAAG	3 cut(s)	588, 1080, 1459
Eco72I	CACGTG	1 cut(s)	1642
Eco88I	CYCGRG	2 cut(s)	218, 1746
EcoICRI	GAGCTC	1 cut(s)	1823
EcoRI	GAATTC	1 cut(s)	1021
EcoRII	CCWGG	5 cut(s)	236, 1016, 1202, 1705, 2014
EcoRV	GATATC	2 cut(s)	184, 860
EcoT14I	CCWWGG	1 cut(s)	1161
EcoT38I	GRGCYC	2 cut(s)	1803, 1825
ErhI	CCWWGG	1 cut(s)	1161
FaeI	CATG	8 cut(s)	217, 439, 1113, 1123, 1165, 1579, 1732, 1766
FalI	AAGNNNNNCTT	4 cut(s)	1471, 1503, 1542, 1574
FaqI	GGGAC	1 cut(s)	1659
FatI	CATG	8 cut(s)	213, 435, 1109, 1119, 1161, 1575, 1728, 1762
FauI	CCCGC	3 cut(s)	451, 504, 1027
FauNDI	CATATG	1 cut(s)	259
FbaI	TGATCA	3 cut(s)	342, 438, 682
Fnu4HI	GCNGC	3 cut(s)	130, 2020, 2023
FokI	GGATG	7 cut(s)	415, 475, 1159, 1205, 1372, 1674, 1976
FriOI	GRGCYC	2 cut(s)	1803, 1825
Fsp4HI	GCNGC	3 cut(s)	130, 2020, 2023
FspBI	CTAG	4 cut(s)	669, 797, 1649, 1836
FspI	TGCGCA	1 cut(s)	1533
GlaI	GCGC	2 cut(s)	413, 1533
GluI	GCNGC	3 cut(s)	130, 2020, 2023
GsuI	CTGGAG	1 cut(s)	713
HaeIII	GGCC	2 cut(s)	273, 1343
HapII	CCGG	5 cut(s)	407, 518, 759, 1712, 1809
HgaI	GACGC	4 cut(s)	581, 1265, 1624, 1916
HhaI	GCGC	2 cut(s)	414, 1534
Hin1II	CATG	8 cut(s)	217, 439, 1113, 1123, 1165, 1579, 1732, 1766
Hin6I	GCGC	2 cut(s)	412, 1532
HinP1I	GCGC	2 cut(s)	412, 1532
HindIII	AAGCTT	5 cut(s)	381, 482, 837, 972, 1065
HinfI	GANTC	7 cut(s)	197, 871, 1131, 1780, 1843, 2011, 2084
HpaII	CCGG	5 cut(s)	407, 518, 759, 1712, 1809
HphI	GGTGA	5 cut(s)	151, 191, 389, 1096, 1600
Hpy166II	GTNNAC	5 cut(s)	90, 142, 293, 1319, 1639
Hpy188I	TCNGA	8 cut(s)	621, 687, 876, 1272, 1478, 1572, 1881, 1892
Hpy188III	TCNNGA	6 cut(s)	863, 1128, 1280, 1291, 1856, 2110
Hpy8I	GTNNAC	5 cut(s)	90, 142, 293, 1319, 1639
Hpy99I	CGWCG	1 cut(s)	1281
HpyAV	CCTTC	8 cut(s)	547, 648, 785, 860, 1183, 1652, 1954, 2032
HpyCH4III	ACNGT	6 cut(s)	297, 373, 491, 1456, 1501, 2035
HpyCH4IV	ACGT	2 cut(s)	289, 1641
HpyF10VI	GCNNNNNNNGC	5 cut(s)	1208, 1325, 1340, 1798, 1871
HpyF3I	CTNAG	7 cut(s)	477, 618, 978, 1152, 1185, 1322, 1829
HpySE526I	ACGT	2 cut(s)	289, 1641
Hsp92II	CATG	8 cut(s)	217, 439, 1113, 1123, 1165, 1579, 1732, 1766
HspAI	GCGC	2 cut(s)	412, 1532
Ksp22I	TGATCA	3 cut(s)	342, 438, 682
LguI	GCTCTTC	1 cut(s)	1830
LmnI	GCTCC	3 cut(s)	409, 1820, 1897
Lsp1109I	GCAGC	3 cut(s)	141, 2006, 2034
MaeI	CTAG	4 cut(s)	669, 797, 1649, 1836
MaeII	ACGT	2 cut(s)	289, 1641
MaeIII	GTNAC	1 cut(s)	706
MfeI	CAATTG	1 cut(s)	46
MflI	RGATCY	3 cut(s)	69, 1365, 1470
MhlI	GDGCHC	3 cut(s)	1321, 1803, 1825
MlsI	TGGCCA	2 cut(s)	273, 1343
MluNI	TGGCCA	2 cut(s)	273, 1343
MlyI	GAGTC	3 cut(s)	1837, 2020, 2078
MmeI	TCCRAC	1 cut(s)	538
MnlI	CCTC	7 cut(s)	412, 583, 690, 1075, 1243, 1276, 1348
Mox20I	TGGCCA	2 cut(s)	273, 1343
MroXI	GAANNNNTTC	1 cut(s)	870
MscI	TGGCCA	2 cut(s)	273, 1343
MseI	TTAA	6 cut(s)	987, 1028, 1383, 1560, 1674, 2097
MslI	CAYNNNNRTG	2 cut(s)	818, 2120
Msp20I	TGGCCA	2 cut(s)	273, 1343
MspA1I	CMGCKG	1 cut(s)	2025
MspI	CCGG	5 cut(s)	407, 518, 759, 1712, 1809
MspR9I	CCNGG	7 cut(s)	238, 760, 1018, 1204, 1707, 1810, 2016
MunI	CAATTG	1 cut(s)	46
MvaI	CCWGG	5 cut(s)	238, 1018, 1204, 1707, 2016
MvnI	CGCG	2 cut(s)	61, 1910
MwoI	GCNNNNNNNGC	5 cut(s)	1208, 1325, 1340, 1798, 1871
NciI	CCSGG	2 cut(s)	760, 1810
NcoI	CCATGG	1 cut(s)	1161
NdeI	CATATG	1 cut(s)	259
NheI	GCTAGC	1 cut(s)	1835
NlaIII	CATG	8 cut(s)	217, 439, 1113, 1123, 1165, 1579, 1732, 1766
NlaIV	GGNNCC	2 cut(s)	516, 1899
NsbI	TGCGCA	1 cut(s)	1533
NspI	RCATGY	2 cut(s)	217, 1579
NspV	TTCGAA	2 cut(s)	753, 834
PaeI	GCATGC	2 cut(s)	217, 1579
PaeR7I	CTCGAG	1 cut(s)	1746
PciSI	GCTCTTC	1 cut(s)	1830
PcsI	WCGNNNNNNNCGW	1 cut(s)	335
PdmI	GAANNNNTTC	1 cut(s)	870
PfeI	GAWTC	4 cut(s)	197, 871, 1131, 1780
PfoI	TCCNGGA	2 cut(s)	236, 1016
PinAI	ACCGGT	1 cut(s)	517
PkrI	GCNGC	3 cut(s)	131, 2021, 2024
PleI	GAGTC	3 cut(s)	1837, 2019, 2078
PmaCI	CACGTG	1 cut(s)	1642
PmlI	CACGTG	1 cut(s)	1642
PpsI	GAGTC	3 cut(s)	1837, 2019, 2078
Ppu21I	YACGTR	2 cut(s)	290, 1642
Psp124BI	GAGCTC	1 cut(s)	1825
Psp6I	CCWGG	5 cut(s)	236, 1016, 1202, 1705, 2014
PspCI	CACGTG	1 cut(s)	1642
PspGI	CCWGG	5 cut(s)	236, 1016, 1202, 1705, 2014
PspN4I	GGNNCC	2 cut(s)	516, 1899
PspPI	GGNCC	1 cut(s)	1709
PspXI	VCTCGAGB	1 cut(s)	1746
PstI	CTGCAG	1 cut(s)	2024
PstNI	CAGNNNCTG	1 cut(s)	691
PsuI	RGATCY	3 cut(s)	69, 1365, 1470
PvuII	CAGCTG	1 cut(s)	2025
RsaI	GTAC	2 cut(s)	38, 370
RsaNI	GTAC	2 cut(s)	37, 369
RseI	CAYNNNNRTG	2 cut(s)	818, 2120
SacI	GAGCTC	1 cut(s)	1825
SapI	GCTCTTC	1 cut(s)	1830
SaqAI	TTAA	6 cut(s)	987, 1028, 1383, 1560, 1674, 2097
SatI	GCNGC	3 cut(s)	130, 2020, 2023
Sau96I	GGNCC	1 cut(s)	1709
ScaI	AGTACT	1 cut(s)	38
SchI	GAGTC	3 cut(s)	1837, 2020, 2078
ScrFI	CCNGG	7 cut(s)	238, 760, 1018, 1204, 1707, 1810, 2016
SduI	GDGCHC	3 cut(s)	1321, 1803, 1825
SfcI	CTRYAG	1 cut(s)	2020
Sfr274I	CTCGAG	1 cut(s)	1746
SfuI	TTCGAA	2 cut(s)	753, 834
SinI	GGWCC	1 cut(s)	1709
SlaI	CTCGAG	1 cut(s)	1746
SmiMI	CAYNNNNRTG	2 cut(s)	818, 2120
SmlI	CTYRAG	2 cut(s)	93, 1746
SmoI	CTYRAG	2 cut(s)	93, 1746
SpeI	ACTAGT	1 cut(s)	1648
SphI	GCATGC	2 cut(s)	217, 1579
SsiI	CCGC	4 cut(s)	211, 458, 511, 1034
SspMI	CTAG	4 cut(s)	669, 797, 1649, 1836
SstI	GAGCTC	1 cut(s)	1825
StyD4I	CCNGG	7 cut(s)	236, 758, 1016, 1202, 1705, 1808, 2014
StyI	CCWWGG	1 cut(s)	1161
TaaI	ACNGT	6 cut(s)	297, 373, 491, 1456, 1501, 2035
TaiI	ACGT	2 cut(s)	292, 1644
TatI	WGTACW	1 cut(s)	36
TfiI	GAWTC	4 cut(s)	197, 871, 1131, 1780
Tru1I	TTAA	6 cut(s)	987, 1028, 1383, 1560, 1674, 2097
Tru9I	TTAA	6 cut(s)	987, 1028, 1383, 1560, 1674, 2097
TscAI	CASTG	7 cut(s)	80, 259, 726, 1321, 1330, 1459, 2040
TseI	GCWGC	3 cut(s)	129, 2019, 2022
TspGWI	ACGGA	2 cut(s)	183, 1399
TspRI	CASTG	7 cut(s)	80, 259, 726, 1321, 1330, 1459, 2040
VneI	GTGCAC	1 cut(s)	1317
VpaK11BI	GGWCC	1 cut(s)	1709
XapI	RAATTY	6 cut(s)	306, 673, 747, 928, 1021, 1417
XceI	RCATGY	2 cut(s)	217, 1579
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2022
XhoI	CTCGAG	1 cut(s)	1746
XmnI	GAANNNNTTC	1 cut(s)	870
XspI	CTAG	4 cut(s)	669, 797, 1649, 1836
ZrmI	AGTACT	1 cut(s)	38

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.