Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0014592

Physical Location & Seq

Genomic Coordinates Reverse (-)

22930974 .. 22933083

Gene Structure 2110 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000033071

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1968 bp

ATGCCAACAAAACTCCAAACTACAACTAACCTTTTCCACAAACACATCCTCAACTATAGCTTCCCACGTTATAAGGCTTGCTGCTCAGATTTGTCTACTCAAGCATATTATGACTTCCAAAGCAGAAAAGCTGGCAGCTTTCTTGTTTACTGCAACTCCCAAATCACTAAAAGTGGAAGAAATGGTGATCTCAAACAAGCAGAGTCGATTTTCAATCGTATGCCAACTAAGGACACTATCACCTGGACTGCCATGCTCACTGCGTACGCAGAGAATGGCCAAACTAGCTTGGCACGCAAGGTGTTCGATGAAATGCCCCAACGAAACATAGCGTCATATAATGCGATGATCACGGCTTATATTCGGAGCAAAGGTAATGTAGATGAAGCTTTTGGGTTGTTTTGTACGATGCCTGAGCGTAATGTGGTGTCTTATAGTGTGATGATCACTGGTTTCGTAAAGGCGTGGATGTTCGACGAGGCTGAGAGGCTTTACTGTGAGATGCCAGTTCAGTGGCGGGAACCGGTTTGTTCAAATGCGTTGATAAATGGGTATTTGAAGGCGGGAAGAATCGAAGAGGCGGTTAGAGTTTTCGAGGGAATTTCAGAGAGAAATGTGGTTTCTGAGAGTTGCATGGTTGATGGGTATTGCAAACTGGGAAGGATTGGTGATGCTAGAAATTTGTTTGATGTGATGCTGGAGAGGACTGTGGTTACTTGGACGGCAATGATTGATGGGTACATGAAGAAGGGAATGTTCGAAAGGGGTTTTGAATTGTTTTTGGATATGAGAAGGGAGGGGATAGTGGAGGTCAATTCCACTACCATGAGCATAATGTTTGACGCTTGTGGTGGTTTTGGTAGATGTGGAGAAGGGATTCAGATGCACGGGTTAGTTTCCCAAATGGGATTTGATTATGATGTCTTTTTAGGAAATTCTATTATCATTATGTATTGTAGGTTTGGTTTTGTAGATGAAGCTACTAAGATAATACGTATGATGAGCAAGACAAATATAGTTTCCTGGAATTCCTTAATCGCAGGTTATGTTCAATGTGCCGAAGTTGAAGTAGCTTTTAAACTGTTTGAGATGATGCCTGGAAAGGATGTAGTTTCATGGACGACCATGATATCAGGATTCTCAGGCAAGGGCATGACTAGGAAAGCCATCCAATTGTTTTTGTTGATGCCTGAGAAGGATGATGTTGCTTGGACTGCTCTAGTTTCAGGTTTTGTAAATAATGAGGAATATGAGGAGGCTCTCCATTGGTTTATCAAGATGCTTCAGAAAACAACCAGGCCTAATCCACTTACTTTGAGCAGTGTGCTCAGTGCTTCAGCCAGTTTGGCCGCTCTAAATGAGGGGATGCAGATCCATTCTTTTTCACTGAAGGTGAATATGGAAAATAATTTATCTGTTCGAAATGCTCTGGTCTCAATGTATTCGAAGTGTGGGAATGTCATTGATGCCAATCGGATCTTCACAAGTATCTTTTCACCCAGTACTGTTTCATTCAACTCCATGATTACTGGGTTTGCCCAAAATGGTTTTGGGGAAGAAGCCCTGAACTTGTTTTGGAGCATGCAGAACGAAGGTTGCGAGCCAAACCAAATCACATTTCTGGGTGTTCTTTCAGCTTGTGTCCATGTGGGGCTAGTAAAAGAAGGACGGCAGTTTTTTAATTCAATGCAATCATTGCACCACATAGAACCAGGACCGGATCACTATGCTTGCATGGTTGATCTCCTTGGACGATCAGGCTTGCTAGATGAAGCTGTCGAGTTGATTCATTCAATGCCGTTTGAGCCCCATGCTGGGGTTTGGGGAGCGCTTCTTGGTGCTAGCAGGGCTCATTTACGTCTTGATCTTGCAGAGCTTGCAACTCAGCACCTGATCAAATTGGAGCCTGATAATGCAACCCCTTATGTGGAGATCAATCCCATCAGGACTTCCAAGATATTGAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1900864 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

656

Amino Acids

73.51

Weight (kDa)

5.97

Isoelectric Point (pI)

37.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	77 - 110	9.1e-07	PPR repeat family
PPR	PF01535	80 - 110	3.3e-06	PPR repeat
PPR_2	PF13041	109 - 142	1.9e-06	PPR repeat family
PPR	PF01535	143 - 168	6.5e-06	PPR repeat
PPR_2	PF13041	236 - 283	6.7e-13	PPR repeat family
PPR	PF01535	238 - 268	5e-09	PPR repeat
PPR_2	PF13041	338 - 366	9e-06	PPR repeat family
PPR_2	PF13041	400 - 445	1.2e-06	PPR repeat family
PPR_2	PF13041	500 - 548	2.9e-11	PPR repeat family
PPR	PF01535	503 - 533	7.5e-08	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0014592)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53600 AT1G53600
fragaria_vesca	FvH4_3g16920
malus_domestica	MD03G1255800.v1.1
prunus_persica	Prupe.4G151400_v2.0.a1
pyrus_communis	pycom03g20240
rosa_chinensis	RchiOBHm_Chr5g0028141
rosa_laevigata	RLG00000033071
rosa_multiflora	Rmu_co8381305.1_g000001 Rmu_sc0002598.1_g000012
rosa_roxburghii	Rroxscaffold_1G00051540
rosa_rugosa	Rorug05G0104400
rosa_samantha	Rh5AG197600 Rh5BG196200 Rh5CG216200 Rh5DG197900
rosa_wichuraiana	Rw5G018060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	72
Acc36I	ACCTGC	1 cut(s)	1031
AccBSI	CCGCTC	1 cut(s)	1352
AccI	GTMKAC	1 cut(s)	95
AciI	CCGC	4 cut(s)	517, 563, 581, 1350
AclWI	GGATC	3 cut(s)	1366, 1484, 1728
AcoI	YGGCCR	2 cut(s)	277, 1347
AcsI	RAATTY	4 cut(s)	600, 679, 934, 1027
AcuI	CTGAAG	3 cut(s)	1268, 1320, 1409
AfaI	GTAC	4 cut(s)	266, 406, 740, 1504
AfeI	AGCGCT	1 cut(s)	1830
AfiI	CCNNNNNNNGG	4 cut(s)	1814, 1815, 1816, 1927
AgeI	ACCGGT	1 cut(s)	523
AjnI	CCWGG	5 cut(s)	242, 1022, 1096, 1295, 1711
AjuI	GAANNNNNNNTTGG	4 cut(s)	1463, 1495, 1602, 1634
Alw21I	GWGCWC	1 cut(s)	1329
Alw26I	GTCTC	1 cut(s)	1438
AlwI	GGATC	3 cut(s)	1366, 1484, 1728
AlwNI	CAGNNNCTG	1 cut(s)	1891
Aor51HI	AGCGCT	1 cut(s)	1830
AoxI	GGCC	3 cut(s)	277, 1298, 1347
ApeKI	GCWGC	2 cut(s)	81, 135
ApoI	RAATTY	4 cut(s)	600, 679, 934, 1027
AsiGI	ACCGGT	1 cut(s)	523
Asp700I	GAANNNNTTC	1 cut(s)	876
AspLEI	GCGC	1 cut(s)	1831
AspS9I	GGNCC	1 cut(s)	1715
AsuHPI	GGTGA	5 cut(s)	197, 232, 680, 1405, 1488
AsuII	TTCGAA	3 cut(s)	759, 1420, 1445
AsuNHI	GCTAGC	1 cut(s)	1841
AvaII	GGWCC	1 cut(s)	1715
BalI	TGGCCA	1 cut(s)	279
BanII	GRGCYC	2 cut(s)	1809, 1852
Bbv12I	GWGCWC	1 cut(s)	1329
BbvI	GCAGC	2 cut(s)	68, 147
BccI	CCATC	4 cut(s)	635, 728, 1175, 1949
BceAI	ACGGC	4 cut(s)	369, 738, 1685, 1783
BcgI	CGANNNNNNTGC	2 cut(s)	286, 320
BciT130I	CCWGG	5 cut(s)	244, 1024, 1098, 1297, 1713
BclI	TGATCA	3 cut(s)	348, 444, 1893
BcoDI	GTCTC	1 cut(s)	1438
BfaI	CTAG	7 cut(s)	285, 675, 1158, 1220, 1655, 1766, 1842
BfmI	CTRYAG	1 cut(s)	55
BfoI	RGCGCY	1 cut(s)	1832
BfuAI	ACCTGC	1 cut(s)	1031
BglI	GCCNNNNNGGC	1 cut(s)	1346
BisI	GCNGC	3 cut(s)	82, 136, 1350
BlsI	GCNGC	3 cut(s)	83, 137, 1351
BmcAI	AGTACT	1 cut(s)	1504
Bme1390I	CCNGG	5 cut(s)	244, 1024, 1098, 1297, 1713
Bme18I	GGWCC	1 cut(s)	1715
BmgT120I	GGNCC	1 cut(s)	1715
BmiI	GGNNCC	2 cut(s)	522, 1905
BmrFI	CCNGG	5 cut(s)	244, 1024, 1098, 1297, 1713
BmrI	ACTGGG	3 cut(s)	665, 1494, 1539
BmtI	GCTAGC	1 cut(s)	1845
BmuI	ACTGGG	3 cut(s)	665, 1494, 1539
BpmI	CTGGAG	1 cut(s)	719
Bpu10I	CCTNAGC	1 cut(s)	414
Bpu14I	TTCGAA	3 cut(s)	759, 1420, 1445
BpuEI	CTTGAG	1 cut(s)	84
BsaAI	YACGTR	1 cut(s)	995
BsaBI	GATNNNNATC	2 cut(s)	1370, 1470
BsaI	GGTCTC	1 cut(s)	1438
BsaJI	CCNNGG	1 cut(s)	1747
BsaWI	WCCGGW	2 cut(s)	523, 1717
BsaXI	ACNNNNNCTCC	4 cut(s)	140, 170, 358, 388
Bsc4I	CCNNNNNNNGG	4 cut(s)	1814, 1815, 1816, 1927
Bse118I	RCCGGY	1 cut(s)	523
Bse1I	ACTGG	6 cut(s)	454, 506, 660, 1341, 1500, 1534
Bse3DI	GCAATG	2 cut(s)	732, 1694
Bse8I	GATNNNNATC	2 cut(s)	1370, 1470
BseBI	CCWGG	5 cut(s)	244, 1024, 1098, 1297, 1713
BseDI	CCNNGG	1 cut(s)	1747
BseGI	GGATG	6 cut(s)	45, 474, 1111, 1167, 1204, 1371
BseJI	GATNNNNATC	2 cut(s)	1370, 1470
BseLI	CCNNNNNNNGG	4 cut(s)	1814, 1815, 1816, 1927
BseMI	GCAATG	2 cut(s)	732, 1694
BseMII	CTCAG	8 cut(s)	99, 405, 474, 615, 1155, 1182, 1342, 1898
BseNI	ACTGG	6 cut(s)	454, 506, 660, 1341, 1500, 1534
BseRI	GAGGAG	1 cut(s)	1268
BseXI	GCAGC	2 cut(s)	68, 147
BseYI	CCCAGC	1 cut(s)	1814
BshFI	GGCC	3 cut(s)	279, 1300, 1349
BshTI	ACCGGT	1 cut(s)	523
BsiHKAI	GWGCWC	1 cut(s)	1329
BsiSI	CCGG	2 cut(s)	524, 1718
BsiWI	CGTACG	1 cut(s)	264
BslI	CCNNNNNNNGG	4 cut(s)	1814, 1815, 1816, 1927
BsmAI	GTCTC	1 cut(s)	1438
BsnI	GGCC	3 cut(s)	279, 1300, 1349
Bso31I	GGTCTC	1 cut(s)	1438
Bsp119I	TTCGAA	3 cut(s)	759, 1420, 1445
Bsp1286I	GDGCHC	3 cut(s)	1329, 1809, 1852
BspACI	CCGC	4 cut(s)	517, 563, 581, 1350
BspANI	GGCC	3 cut(s)	279, 1300, 1349
BspCNI	CTCAG	8 cut(s)	98, 406, 475, 616, 1154, 1183, 1341, 1897
BspLI	GGNNCC	2 cut(s)	522, 1905
BspMI	ACCTGC	1 cut(s)	1031
BspOI	GCTAGC	1 cut(s)	1845
BspPI	GGATC	3 cut(s)	1366, 1484, 1728
BspT104I	TTCGAA	3 cut(s)	759, 1420, 1445
BspTNI	GGTCTC	1 cut(s)	1438
BsrBI	CCGCTC	1 cut(s)	1352
BsrDI	GCAATG	2 cut(s)	732, 1694
BsrFI	RCCGGY	1 cut(s)	523
BsrI	ACTGG	6 cut(s)	454, 506, 660, 1341, 1500, 1534
BssAI	RCCGGY	1 cut(s)	523
BssECI	CCNNGG	1 cut(s)	1747
BssT1I	CCWWGG	1 cut(s)	1747
Bst2UI	CCWGG	5 cut(s)	244, 1024, 1098, 1297, 1713
Bst4CI	ACNGT	4 cut(s)	497, 709, 1083, 1507
Bst6I	CTCTTC	1 cut(s)	570
BstAPI	GCANNNNNTGC	2 cut(s)	1696, 1877
BstBAI	YACGTR	1 cut(s)	995
BstBI	TTCGAA	3 cut(s)	759, 1420, 1445
BstC8I	GCNNGC	9 cut(s)	79, 133, 295, 1583, 1601, 1732, 1763, 1843, 1878
BstF5I	GGATG	6 cut(s)	45, 474, 1111, 1167, 1204, 1371
BstH2I	RGCGCY	1 cut(s)	1832
BstHHI	GCGC	1 cut(s)	1831
BstMAI	GTCTC	1 cut(s)	1438
BstMWI	GCNNNNNNNGC	8 cut(s)	285, 294, 1214, 1346, 1696, 1804, 1847, 1877
BstNI	CCWGG	5 cut(s)	244, 1024, 1098, 1297, 1713
BstNSI	RCATGY	1 cut(s)	1585
BstSCI	CCNGG	5 cut(s)	242, 1022, 1096, 1295, 1711
BstSFI	CTRYAG	1 cut(s)	55
BstSNI	TACGTA	1 cut(s)	995
BstV1I	GCAGC	2 cut(s)	68, 147
BstX2I	RGATCY	2 cut(s)	1371, 1476
BstXI	CCANNNNNNTGG	1 cut(s)	513
BstYI	RGATCY	2 cut(s)	1371, 1476
BsuRI	GGCC	3 cut(s)	279, 1300, 1349
BtgZI	GCGATG	1 cut(s)	359
BtsCI	GGATG	6 cut(s)	45, 474, 1111, 1167, 1204, 1371
BtsI	GCAGTG	2 cut(s)	258, 1327
BtsIMutI	CAGTG	6 cut(s)	258, 447, 518, 1327, 1336, 1385
BveI	ACCTGC	1 cut(s)	1031
Cac8I	GCNNGC	9 cut(s)	79, 133, 295, 1583, 1601, 1732, 1763, 1843, 1878
CaiI	CAGNNNCTG	1 cut(s)	1891
CfoI	GCGC	1 cut(s)	1831
Cfr10I	RCCGGY	1 cut(s)	523
Cfr13I	GGNCC	1 cut(s)	1715
CseI	GACGC	2 cut(s)	321, 851
Csp6I	GTAC	4 cut(s)	265, 405, 739, 1503
CspAI	ACCGGT	1 cut(s)	523
CspCI	CAANNNNNGTGG	2 cut(s)	1296, 1331
CviQI	GTAC	4 cut(s)	265, 405, 739, 1503
DraI	TTTAAA	1 cut(s)	1078
EaeI	YGGCCR	2 cut(s)	277, 1347
Eam1104I	CTCTTC	1 cut(s)	570
EarI	CTCTTC	1 cut(s)	570
Eco105I	TACGTA	1 cut(s)	995
Eco130I	CCWWGG	1 cut(s)	1747
Eco147I	AGGCCT	1 cut(s)	1300
Eco24I	GRGCYC	2 cut(s)	1809, 1852
Eco31I	GGTCTC	1 cut(s)	1438
Eco32I	GATATC	1 cut(s)	1131
Eco47I	GGWCC	1 cut(s)	1715
Eco47III	AGCGCT	1 cut(s)	1830
Eco57I	CTGAAG	3 cut(s)	1268, 1320, 1409
EcoRI	GAATTC	1 cut(s)	1027
EcoRII	CCWGG	5 cut(s)	242, 1022, 1096, 1295, 1711
EcoRV	GATATC	1 cut(s)	1131
EcoT14I	CCWWGG	1 cut(s)	1747
EcoT38I	GRGCYC	2 cut(s)	1809, 1852
ErhI	CCWWGG	1 cut(s)	1747
FauI	CCCGC	2 cut(s)	510, 556
FbaI	TGATCA	3 cut(s)	348, 444, 1893
FblI	GTMKAC	1 cut(s)	95
Fnu4HI	GCNGC	3 cut(s)	82, 136, 1350
FokI	GGATG	6 cut(s)	32, 481, 1118, 1154, 1211, 1378
FriOI	GRGCYC	2 cut(s)	1809, 1852
Fsp4HI	GCNGC	3 cut(s)	82, 136, 1350
FspBI	CTAG	7 cut(s)	285, 675, 1158, 1220, 1655, 1766, 1842
GlaI	GCGC	1 cut(s)	1830
GluI	GCNGC	3 cut(s)	82, 136, 1350
GsaI	CCCAGC	1 cut(s)	1818
GsuI	CTGGAG	1 cut(s)	719
HaeII	RGCGCY	1 cut(s)	1832
HaeIII	GGCC	3 cut(s)	279, 1300, 1349
HapII	CCGG	2 cut(s)	524, 1718
HgaI	GACGC	2 cut(s)	321, 851
HhaI	GCGC	1 cut(s)	1831
Hin6I	GCGC	1 cut(s)	1829
HinP1I	GCGC	1 cut(s)	1829
HindIII	AAGCTT	1 cut(s)	387
HinfI	GANTC	5 cut(s)	203, 570, 877, 1137, 1786
HpaII	CCGG	2 cut(s)	524, 1718
HphI	GGTGA	5 cut(s)	197, 232, 680, 1405, 1488
Hpy166II	GTNNAC	2 cut(s)	96, 148
Hpy188I	TCNGA	7 cut(s)	88, 366, 607, 625, 882, 1287, 1476
Hpy188III	TCNNGA	4 cut(s)	1134, 1276, 1862, 1945
Hpy8I	GTNNAC	2 cut(s)	96, 148
Hpy99I	CGWCG	1 cut(s)	479
HpyAV	CCTTC	9 cut(s)	553, 654, 742, 786, 866, 1189, 1384, 1586, 1658
HpyCH4III	ACNGT	4 cut(s)	497, 709, 1083, 1507
HpyCH4IV	ACGT	3 cut(s)	67, 994, 1858
HpyF10VI	GCNNNNNNNGC	8 cut(s)	285, 294, 1214, 1346, 1696, 1804, 1847, 1877
HpySE526I	ACGT	3 cut(s)	67, 994, 1858
HspAI	GCGC	1 cut(s)	1829
Ksp22I	TGATCA	3 cut(s)	348, 444, 1893
LmnI	GCTCC	4 cut(s)	366, 1578, 1826, 1903
Lsp1109I	GCAGC	2 cut(s)	68, 147
MaeI	CTAG	7 cut(s)	285, 675, 1158, 1220, 1655, 1766, 1842
MaeII	ACGT	3 cut(s)	67, 994, 1858
MaeIII	GTNAC	1 cut(s)	712
MbiI	CCGCTC	1 cut(s)	1352
MboII	GAAGA	6 cut(s)	189, 579, 587, 757, 1471, 1568
MfeI	CAATTG	1 cut(s)	1172
MflI	RGATCY	2 cut(s)	1371, 1476
MhlI	GDGCHC	3 cut(s)	1329, 1809, 1852
MlsI	TGGCCA	1 cut(s)	279
MluNI	TGGCCA	1 cut(s)	279
MlyI	GAGTC	1 cut(s)	212
Mox20I	TGGCCA	1 cut(s)	279
MroXI	GAANNNNTTC	1 cut(s)	876
MscI	TGGCCA	1 cut(s)	279
MseI	TTAA	3 cut(s)	1034, 1077, 1680
MslI	CAYNNNNRTG	1 cut(s)	824
Msp20I	TGGCCA	1 cut(s)	279
MspI	CCGG	2 cut(s)	524, 1718
MspR9I	CCNGG	5 cut(s)	244, 1024, 1098, 1297, 1713
MunI	CAATTG	1 cut(s)	1172
MvaI	CCWGG	5 cut(s)	244, 1024, 1098, 1297, 1713
MwoI	GCNNNNNNNGC	8 cut(s)	285, 294, 1214, 1346, 1696, 1804, 1847, 1877
NheI	GCTAGC	1 cut(s)	1841
NlaIV	GGNNCC	2 cut(s)	522, 1905
NspI	RCATGY	1 cut(s)	1585
NspV	TTCGAA	3 cut(s)	759, 1420, 1445
PaeI	GCATGC	1 cut(s)	1585
PceI	AGGCCT	1 cut(s)	1300
PcsI	WCGNNNNNNNCGW	1 cut(s)	1596
PdmI	GAANNNNTTC	1 cut(s)	876
PfeI	GAWTC	4 cut(s)	570, 877, 1137, 1786
Pfl23II	CGTACG	1 cut(s)	264
PfoI	TCCNGGA	1 cut(s)	1022
PinAI	ACCGGT	1 cut(s)	523
PkrI	GCNGC	3 cut(s)	83, 137, 1351
PleI	GAGTC	1 cut(s)	211
PpsI	GAGTC	1 cut(s)	211
Ppu21I	YACGTR	1 cut(s)	995
PsiI	TTATAA	1 cut(s)	72
Psp6I	CCWGG	5 cut(s)	242, 1022, 1096, 1295, 1711
PspFI	CCCAGC	1 cut(s)	1814
PspGI	CCWGG	5 cut(s)	242, 1022, 1096, 1295, 1711
PspLI	CGTACG	1 cut(s)	264
PspN4I	GGNNCC	2 cut(s)	522, 1905
PspPI	GGNCC	1 cut(s)	1715
PstNI	CAGNNNCTG	1 cut(s)	1891
PsuI	RGATCY	2 cut(s)	1371, 1476
RsaI	GTAC	4 cut(s)	266, 406, 740, 1504
RsaNI	GTAC	4 cut(s)	265, 405, 739, 1503
RseI	CAYNNNNRTG	1 cut(s)	824
SaqAI	TTAA	3 cut(s)	1034, 1077, 1680
SatI	GCNGC	3 cut(s)	82, 136, 1350
Sau96I	GGNCC	1 cut(s)	1715
ScaI	AGTACT	1 cut(s)	1504
SchI	GAGTC	1 cut(s)	212
ScrFI	CCNGG	5 cut(s)	244, 1024, 1098, 1297, 1713
SduI	GDGCHC	3 cut(s)	1329, 1809, 1852
SfcI	CTRYAG	1 cut(s)	55
SfuI	TTCGAA	3 cut(s)	759, 1420, 1445
SinI	GGWCC	1 cut(s)	1715
SmiMI	CAYNNNNRTG	1 cut(s)	824
SmlI	CTYRAG	1 cut(s)	99
SmoI	CTYRAG	1 cut(s)	99
SnaBI	TACGTA	1 cut(s)	995
SphI	GCATGC	1 cut(s)	1585
SseBI	AGGCCT	1 cut(s)	1300
SsiI	CCGC	4 cut(s)	517, 563, 581, 1350
SspMI	CTAG	7 cut(s)	285, 675, 1158, 1220, 1655, 1766, 1842
StuI	AGGCCT	1 cut(s)	1300
StyD4I	CCNGG	5 cut(s)	242, 1022, 1096, 1295, 1711
StyI	CCWWGG	1 cut(s)	1747
TaaI	ACNGT	4 cut(s)	497, 709, 1083, 1507
TaiI	ACGT	3 cut(s)	70, 997, 1861
TaqI	TCGA	9 cut(s)	206, 306, 474, 573, 594, 759, 1420, 1445, 1779
TatI	WGTACW	1 cut(s)	1502
TauI	GCSGC	1 cut(s)	1352
TfiI	GAWTC	4 cut(s)	570, 877, 1137, 1786
Tru1I	TTAA	3 cut(s)	1034, 1077, 1680
Tru9I	TTAA	3 cut(s)	1034, 1077, 1680
TscAI	CASTG	6 cut(s)	265, 454, 518, 1327, 1336, 1392
TseI	GCWGC	2 cut(s)	81, 135
TspDTI	ATGAA	8 cut(s)	324, 399, 758, 990, 1104, 1500, 1778, 1785
TspRI	CASTG	6 cut(s)	265, 454, 518, 1327, 1336, 1392
VpaK11BI	GGWCC	1 cut(s)	1715
XapI	RAATTY	4 cut(s)	600, 679, 934, 1027
XceI	RCATGY	1 cut(s)	1585
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1547
XmiI	GTMKAC	1 cut(s)	95
XmnI	GAANNNNTTC	1 cut(s)	876
XspI	CTAG	7 cut(s)	285, 675, 1158, 1220, 1655, 1766, 1842
ZrmI	AGTACT	1 cut(s)	1504

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.