Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0014592

Physical Location & Seq

Genomic Coordinates Reverse (-)

23269798 .. 23271996

Gene Structure 2199 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG197600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2199 bp

ATGATGCCAACAAAACTCCAAACTACAACCAACCTTTTCCGTAAACACTTCCTCAACTATAGCTTCCCACGTTATAAGGCTCGCTGCTCATATTTGTCTACTCAAGCATACTATGACTTTCAAAGCAGGAAAGCTAGCAGCTTTCTTGTTTACTGCAACTCCCAAATCACTAAAAGTGGAAGAAATGGTGATCTCAAACAAGCAGAGTCGATTTTCAATCGTATGCCAACTAAGGACACTATCACCTGGACTGCCATGCTTACTGCATATGCAGAGAATGGCCAAACTAGCTTGGCACGCAAGGTGTTCGATGAAATGCCCCAACGAAACGTAGCATCATATAATGCGATGATCACGGGTTATATTCGGAGCAAAGGTAATGTAGATGAAGCTTTTGGGTTGTTTTGTACGATGCCTGAGCGTAATGTGGTGTCTTATAGTGTGATGATCACTGGTTTCGCAAAGGCGTGGATGTTCGACGAGGCTGAGAGGCTTTACTGTGAGATGCCAGGTCAGTGGCGGGAACCGGTTTGTTCAAATGCGTTGATAAATGGGTATTTGAAGGCGGGAAGAATCGAAGAGGCGGTTAGAGTTTTCGAGGGAATGTCAGAGAGAAATGTGGTTTCTGAGAGTTGCATGGTTGATGGGTATTGCAAACTGGGAAGGATTGATGATGCTAGAAATTTGTTTGATGTGATGCTGGAGAGGACTGTGGTTACTTGGACGGCAATGATTGATGGGTACATGAAGAAGGGAATGTTCGAAAGGGGTTTTGAATTGTTTTTGGATATGAGAAGGGAGGGGATGGTGGAGGTCAATTCCACTACCATGAGCATAATGTTTGACGCTTGTGGTGGTTTTGGTAGATGTGGAGAAGGGTTTCAGATGCACGCGTTAGTTTCCCAAATGGGATTTGATTATGATGTCTTTTTAGGAAATTCTATTATCATTATGTATTGTAGGTTTGGTTTTGTAGATGAAGCTACTAAGATAATACGTATGATGAGCAAGACAAATATAGTTTCCTGGAATTCCTTAATCGCAGGTTATGTTCAATGTGCCGAAGTTGAAGTAGCTTTTAAACTGTTTGAGATGATGCCTGAAAAGGATGTAGTTTCATGGACGACCATGATATCAGGATTCTCAAGCAAGGGCATGACTAGGAAAGCCATCCAATTGTTTTTGTTGATGCCTAAGAAGGATGATGTTGCTTGGACTGCTCTAGTTTCAGGTCTTGTAAATAATGAGGAATATGAGGAGGCTCTCCATTGGTTTATCAAGATGCTTCGGAAAACAACCAGGCCTAATCCACTTACTTTGAGCAGTGTGCTCAGTGCTTCCGCCAGTTTGGCCGCTCTAAATGAGGGGATGCAGATCCATTCTTTTTCACTGAAGGTGAATATGGAAAATAATTTATCTGTTCGAAATGCTCTGGTCTCAATGTATTCGAAGTGTGGGAATGTCATTGATGCCAATCGGATCTTCACAAGTATCTTTTCACCCAATACTGTTTCATTCAACTCCATGATTACTGGGTTTGCCCAAAATGGTTTTGGGGAAGAAGCCCTGAACTTGTTTTGGAGCATGCAGAATGAAGGTTGCGAGCCAAACCAAATCACATTTCTGGGTGTTCTTTCAGCTTGTGTCCATGTGGGACTAGTAAAAGAAGGACGGCAGTTTTTTAATTCGATGCAATCATTGCACCACATAGAACCAGGACCGGATCACTATGCTTGCATGGTTGATCTCCTTGGACGATCTGGCTTGCTAGATGAAGCTGTCGAGTTGATTCATTCAATGCCGTTTGAGCCCCATGCTGGGGTTTGGGGAGCTCTTCTTGGTGCTAGCAGGGCTCATTTACGTCTTGATCTTGCAGAGCTTGCAACTCAGCACCTGATCAAATTGGAGCCCGATAATGCAACCCCTTATGTGGTTTTATCCAATATATATTCTACTTTAGGGAAAGTGAAGGATGGAGACCAAGTGAGGATGACCAAGAATTCAAAAGGGATAAGGAAGAGTCCAGGCTGCAGCTGGGTTACATTGAAGGACAAGGTTCATTTATTTCTTGCAGGAGATCAATCCCATCAGGACTTCCAAGATATTGAATTGATACTCTGGATCATAACAATGGAAATAGGACAGCTAGCTGGATCGTCCAAAGGTGATCATTCTTTGAATTGTTTTCTGCATCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1900864 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

732

Amino Acids

82.41

Weight (kDa)

6.38

Isoelectric Point (pI)

35.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	78 - 111	1.1e-06	PPR repeat family
PPR	PF01535	81 - 111	4.2e-06	PPR repeat
PPR_2	PF13041	109 - 143	7.1e-07	PPR repeat family
PPR	PF01535	144 - 170	4.4e-06	PPR repeat
PPR_2	PF13041	177 - 207	3.6e-06	PPR repeat family
PPR	PF01535	178 - 207	1.8e-06	PPR repeat
PPR_1	PF12854	206 - 233	5.3e-06	PPR repeat
PPR_2	PF13041	237 - 284	1.9e-12	PPR repeat family
PPR	PF01535	239 - 268	1.4e-08	PPR repeat
PPR_2	PF13041	339 - 370	1.6e-06	PPR repeat family
PPR	PF01535	341 - 370	1e-05	PPR repeat
PPR	PF01535	372 - 400	2.4e-06	PPR repeat
PPR_2	PF13041	401 - 446	1e-06	PPR repeat family
PPR_2	PF13041	501 - 549	1.1e-11	PPR repeat family
PPR	PF01535	504 - 534	8.6e-08	PPR repeat
E_motif	PF20431	622 - 680	3.6e-15	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0014592)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53600 AT1G53600
fragaria_vesca	FvH4_3g16920
malus_domestica	MD03G1255800.v1.1
prunus_persica	Prupe.4G151400_v2.0.a1
pyrus_communis	pycom03g20240
rosa_chinensis	RchiOBHm_Chr5g0028141
rosa_laevigata	RLG00000033071
rosa_multiflora	Rmu_co8381305.1_g000001 Rmu_sc0002598.1_g000012
rosa_roxburghii	Rroxscaffold_1G00051540
rosa_rugosa	Rorug05G0104400
rosa_samantha	Rh5AG197600 Rh5BG196200 Rh5CG216200 Rh5DG197900
rosa_wichuraiana	Rw5G018060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	75
Acc36I	ACCTGC	1 cut(s)	1034
AccBSI	CCGCTC	1 cut(s)	1355
AccI	GTMKAC	1 cut(s)	98
AccII	CGCG	1 cut(s)	893
AciI	CCGC	5 cut(s)	520, 566, 584, 1341, 1353
AclWI	GGATC	5 cut(s)	1369, 1487, 1731, 2129, 2161
AcoI	YGGCCR	2 cut(s)	280, 1350
AcsI	RAATTY	4 cut(s)	682, 937, 1030, 1999
AcuI	CTGAAG	1 cut(s)	1412
AfaI	GTAC	2 cut(s)	409, 743
AfiI	CCNNNNNNNGG	4 cut(s)	1817, 1818, 1819, 1930
AflIII	ACRYGT	1 cut(s)	891
AgeI	ACCGGT	1 cut(s)	526
AhlI	ACTAGT	1 cut(s)	1657
AjnI	CCWGG	6 cut(s)	245, 508, 1025, 1298, 1714, 2023
AjuI	GAANNNNNNNTTGG	4 cut(s)	1466, 1498, 1605, 1637
Alw21I	GWGCWC	2 cut(s)	1332, 1834
Alw26I	GTCTC	2 cut(s)	1441, 1971
AlwI	GGATC	5 cut(s)	1369, 1487, 1731, 2129, 2161
AlwNI	CAGNNNCTG	1 cut(s)	1894
AoxI	GGCC	3 cut(s)	280, 1301, 1350
ApeKI	GCWGC	4 cut(s)	84, 138, 2028, 2031
ApoI	RAATTY	4 cut(s)	682, 937, 1030, 1999
AsiGI	ACCGGT	1 cut(s)	526
Asp700I	GAANNNNTTC	1 cut(s)	879
AspS9I	GGNCC	1 cut(s)	1718
AsuHPI	GGTGA	5 cut(s)	200, 235, 1408, 1491, 2177
AsuII	TTCGAA	3 cut(s)	762, 1423, 1448
AsuNHI	GCTAGC	3 cut(s)	134, 1844, 2146
AvaII	GGWCC	1 cut(s)	1718
BalI	TGGCCA	1 cut(s)	282
BanII	GRGCYC	4 cut(s)	1812, 1834, 1855, 1911
Bbv12I	GWGCWC	2 cut(s)	1332, 1834
BbvI	GCAGC	4 cut(s)	71, 150, 2015, 2043
BccI	CCATC	6 cut(s)	638, 731, 799, 1178, 1967, 2094
BceAI	ACGGC	3 cut(s)	741, 1688, 1786
BcgI	CGANNNNNNTGC	2 cut(s)	289, 323
BciT130I	CCWGG	6 cut(s)	247, 510, 1027, 1300, 1716, 2025
BclI	TGATCA	4 cut(s)	351, 447, 1896, 2167
BcoDI	GTCTC	2 cut(s)	1441, 1971
BcuI	ACTAGT	1 cut(s)	1657
BfaI	CTAG	9 cut(s)	135, 288, 678, 1161, 1223, 1658, 1769, 1845, 2147
BfmI	CTRYAG	2 cut(s)	58, 2029
BfuAI	ACCTGC	1 cut(s)	1034
BglI	GCCNNNNNGGC	1 cut(s)	1349
BisI	GCNGC	5 cut(s)	85, 139, 1353, 2029, 2032
BlsI	GCNGC	5 cut(s)	86, 140, 1354, 2030, 2033
Bme1390I	CCNGG	6 cut(s)	247, 510, 1027, 1300, 1716, 2025
Bme18I	GGWCC	1 cut(s)	1718
BmgT120I	GGNCC	1 cut(s)	1718
BmiI	GGNNCC	2 cut(s)	525, 1908
BmrFI	CCNGG	6 cut(s)	247, 510, 1027, 1300, 1716, 2025
BmrI	ACTGGG	2 cut(s)	668, 1542
BmtI	GCTAGC	3 cut(s)	138, 1848, 2150
BmuI	ACTGGG	2 cut(s)	668, 1542
BpmI	CTGGAG	1 cut(s)	722
Bpu10I	CCTNAGC	1 cut(s)	417
Bpu14I	TTCGAA	3 cut(s)	762, 1423, 1448
BpuEI	CTTGAG	2 cut(s)	87, 1129
BsaAI	YACGTR	1 cut(s)	998
BsaBI	GATNNNNATC	2 cut(s)	1373, 1473
BsaI	GGTCTC	2 cut(s)	1441, 1971
BsaJI	CCNNGG	1 cut(s)	1750
BsaWI	WCCGGW	2 cut(s)	526, 1720
BsaXI	ACNNNNNCTCC	6 cut(s)	143, 173, 361, 391, 1968, 1998
Bsc4I	CCNNNNNNNGG	4 cut(s)	1817, 1818, 1819, 1930
Bse118I	RCCGGY	1 cut(s)	526
Bse1I	ACTGG	4 cut(s)	457, 663, 1344, 1537
Bse3DI	GCAATG	2 cut(s)	735, 1697
Bse8I	GATNNNNATC	2 cut(s)	1373, 1473
BseBI	CCWGG	6 cut(s)	247, 510, 1027, 1300, 1716, 2025
BseDI	CCNNGG	1 cut(s)	1750
BseGI	GGATG	8 cut(s)	477, 810, 1114, 1170, 1207, 1374, 1978, 1995
BseJI	GATNNNNATC	2 cut(s)	1373, 1473
BseLI	CCNNNNNNNGG	4 cut(s)	1817, 1818, 1819, 1930
BseMI	GCAATG	2 cut(s)	735, 1697
BseMII	CTCAG	5 cut(s)	408, 477, 618, 1345, 1901
BseNI	ACTGG	4 cut(s)	457, 663, 1344, 1537
BseRI	GAGGAG	1 cut(s)	1271
BseXI	GCAGC	4 cut(s)	71, 150, 2015, 2043
BseYI	CCCAGC	2 cut(s)	1817, 2034
Bsh1236I	CGCG	1 cut(s)	893
BshFI	GGCC	3 cut(s)	282, 1303, 1352
BshTI	ACCGGT	1 cut(s)	526
BsiHKAI	GWGCWC	2 cut(s)	1332, 1834
BsiSI	CCGG	2 cut(s)	527, 1721
BslFI	GGGAC	1 cut(s)	1668
BslI	CCNNNNNNNGG	4 cut(s)	1817, 1818, 1819, 1930
BsmAI	GTCTC	2 cut(s)	1441, 1971
BsmFI	GGGAC	1 cut(s)	1668
BsnI	GGCC	3 cut(s)	282, 1303, 1352
Bso31I	GGTCTC	2 cut(s)	1441, 1971
Bsp119I	TTCGAA	3 cut(s)	762, 1423, 1448
Bsp1286I	GDGCHC	5 cut(s)	1332, 1812, 1834, 1855, 1911
BspACI	CCGC	5 cut(s)	520, 566, 584, 1341, 1353
BspANI	GGCC	3 cut(s)	282, 1303, 1352
BspCNI	CTCAG	5 cut(s)	409, 478, 619, 1344, 1900
BspFNI	CGCG	1 cut(s)	893
BspLI	GGNNCC	2 cut(s)	525, 1908
BspMAI	CTGCAG	1 cut(s)	2033
BspMI	ACCTGC	1 cut(s)	1034
BspOI	GCTAGC	3 cut(s)	138, 1848, 2150
BspPI	GGATC	5 cut(s)	1369, 1487, 1731, 2129, 2161
BspQI	GCTCTTC	1 cut(s)	1839
BspT104I	TTCGAA	3 cut(s)	762, 1423, 1448
BspTNI	GGTCTC	2 cut(s)	1441, 1971
BsrBI	CCGCTC	1 cut(s)	1355
BsrDI	GCAATG	2 cut(s)	735, 1697
BsrFI	RCCGGY	1 cut(s)	526
BsrI	ACTGG	4 cut(s)	457, 663, 1344, 1537
BssAI	RCCGGY	1 cut(s)	526
BssECI	CCNNGG	1 cut(s)	1750
BssT1I	CCWWGG	1 cut(s)	1750
Bst2UI	CCWGG	6 cut(s)	247, 510, 1027, 1300, 1716, 2025
Bst4CI	ACNGT	4 cut(s)	500, 712, 1086, 1510
Bst6I	CTCTTC	3 cut(s)	573, 1839, 2012
BstAPI	GCANNNNNTGC	2 cut(s)	1699, 1880
BstBAI	YACGTR	1 cut(s)	998
BstBI	TTCGAA	3 cut(s)	762, 1423, 1448
BstDEI	CTNAG	8 cut(s)	231, 417, 486, 627, 987, 1194, 1331, 1887
BstF5I	GGATG	8 cut(s)	477, 810, 1114, 1170, 1207, 1374, 1978, 1995
BstFNI	CGCG	1 cut(s)	893
BstMAI	GTCTC	2 cut(s)	1441, 1971
BstMWI	GCNNNNNNNGC	8 cut(s)	288, 297, 1217, 1349, 1699, 1807, 1850, 1880
BstNI	CCWGG	6 cut(s)	247, 510, 1027, 1300, 1716, 2025
BstNSI	RCATGY	1 cut(s)	1588
BstSCI	CCNGG	6 cut(s)	245, 508, 1025, 1298, 1714, 2023
BstSFI	CTRYAG	2 cut(s)	58, 2029
BstSNI	TACGTA	1 cut(s)	998
BstUI	CGCG	1 cut(s)	893
BstV1I	GCAGC	4 cut(s)	71, 150, 2015, 2043
BstX2I	RGATCY	2 cut(s)	1374, 1479
BstXI	CCANNNNNNTGG	1 cut(s)	516
BstYI	RGATCY	2 cut(s)	1374, 1479
BsuRI	GGCC	3 cut(s)	282, 1303, 1352
BtgZI	GCGATG	1 cut(s)	362
BtsCI	GGATG	8 cut(s)	477, 810, 1114, 1170, 1207, 1374, 1978, 1995
BtsI	GCAGTG	1 cut(s)	1330
BtsIMutI	CAGTG	5 cut(s)	450, 521, 1330, 1339, 1388
BveI	ACCTGC	1 cut(s)	1034
CaiI	CAGNNNCTG	1 cut(s)	1894
Cfr10I	RCCGGY	1 cut(s)	526
Cfr13I	GGNCC	1 cut(s)	1718
CseI	GACGC	1 cut(s)	854
Csp6I	GTAC	2 cut(s)	408, 742
CspAI	ACCGGT	1 cut(s)	526
CspCI	CAANNNNNGTGG	2 cut(s)	1299, 1334
CviQI	GTAC	2 cut(s)	408, 742
DdeI	CTNAG	8 cut(s)	231, 417, 486, 627, 987, 1194, 1331, 1887
DraI	TTTAAA	1 cut(s)	1081
EaeI	YGGCCR	2 cut(s)	280, 1350
Eam1104I	CTCTTC	3 cut(s)	573, 1839, 2012
EarI	CTCTTC	3 cut(s)	573, 1839, 2012
EciI	GGCGGA	1 cut(s)	1330
Ecl136II	GAGCTC	1 cut(s)	1832
Eco105I	TACGTA	1 cut(s)	998
Eco130I	CCWWGG	1 cut(s)	1750
Eco147I	AGGCCT	1 cut(s)	1303
Eco24I	GRGCYC	4 cut(s)	1812, 1834, 1855, 1911
Eco31I	GGTCTC	2 cut(s)	1441, 1971
Eco32I	GATATC	1 cut(s)	1134
Eco47I	GGWCC	1 cut(s)	1718
Eco53kI	GAGCTC	1 cut(s)	1832
Eco57I	CTGAAG	1 cut(s)	1412
EcoICRI	GAGCTC	1 cut(s)	1832
EcoRI	GAATTC	2 cut(s)	1030, 1999
EcoRII	CCWGG	6 cut(s)	245, 508, 1025, 1298, 1714, 2023
EcoRV	GATATC	1 cut(s)	1134
EcoT14I	CCWWGG	1 cut(s)	1750
EcoT38I	GRGCYC	4 cut(s)	1812, 1834, 1855, 1911
ErhI	CCWWGG	1 cut(s)	1750
FaqI	GGGAC	1 cut(s)	1668
FauI	CCCGC	2 cut(s)	513, 559
FauNDI	CATATG	1 cut(s)	268
FbaI	TGATCA	4 cut(s)	351, 447, 1896, 2167
FblI	GTMKAC	1 cut(s)	98
Fnu4HI	GCNGC	5 cut(s)	85, 139, 1353, 2029, 2032
FokI	GGATG	8 cut(s)	484, 817, 1121, 1157, 1214, 1381, 1985, 2002
FriOI	GRGCYC	4 cut(s)	1812, 1834, 1855, 1911
Fsp4HI	GCNGC	5 cut(s)	85, 139, 1353, 2029, 2032
FspBI	CTAG	9 cut(s)	135, 288, 678, 1161, 1223, 1658, 1769, 1845, 2147
GluI	GCNGC	5 cut(s)	85, 139, 1353, 2029, 2032
GsaI	CCCAGC	2 cut(s)	1821, 2038
GsuI	CTGGAG	1 cut(s)	722
HaeIII	GGCC	3 cut(s)	282, 1303, 1352
HapII	CCGG	2 cut(s)	527, 1721
HgaI	GACGC	1 cut(s)	854
HindIII	AAGCTT	1 cut(s)	390
HinfI	GANTC	5 cut(s)	206, 573, 1140, 1789, 2020
HpaII	CCGG	2 cut(s)	527, 1721
HphI	GGTGA	5 cut(s)	200, 235, 1408, 1491, 2177
Hpy166II	GTNNAC	3 cut(s)	44, 99, 151
Hpy188I	TCNGA	6 cut(s)	369, 610, 628, 885, 1290, 1479
Hpy188III	TCNNGA	5 cut(s)	1137, 1279, 1865, 2090, 2119
Hpy8I	GTNNAC	3 cut(s)	44, 99, 151
Hpy99I	CGWCG	1 cut(s)	482
HpyCH4III	ACNGT	4 cut(s)	500, 712, 1086, 1510
HpyCH4IV	ACGT	4 cut(s)	70, 330, 997, 1861
HpyF10VI	GCNNNNNNNGC	8 cut(s)	288, 297, 1217, 1349, 1699, 1807, 1850, 1880
HpyF3I	CTNAG	8 cut(s)	231, 417, 486, 627, 987, 1194, 1331, 1887
HpySE526I	ACGT	4 cut(s)	70, 330, 997, 1861
Ksp22I	TGATCA	4 cut(s)	351, 447, 1896, 2167
LguI	GCTCTTC	1 cut(s)	1839
LmnI	GCTCC	4 cut(s)	369, 1581, 1829, 1906
Lsp1109I	GCAGC	4 cut(s)	71, 150, 2015, 2043
MaeI	CTAG	9 cut(s)	135, 288, 678, 1161, 1223, 1658, 1769, 1845, 2147
MaeII	ACGT	4 cut(s)	70, 330, 997, 1861
MaeIII	GTNAC	2 cut(s)	715, 2038
MbiI	CCGCTC	1 cut(s)	1355
MboII	GAAGA	8 cut(s)	192, 582, 590, 760, 1474, 1571, 1826, 2029
MfeI	CAATTG	1 cut(s)	1175
MflI	RGATCY	2 cut(s)	1374, 1479
MhlI	GDGCHC	5 cut(s)	1332, 1812, 1834, 1855, 1911
MlsI	TGGCCA	1 cut(s)	282
MluI	ACGCGT	1 cut(s)	891
MluNI	TGGCCA	1 cut(s)	282
MlyI	GAGTC	2 cut(s)	215, 2029
Mox20I	TGGCCA	1 cut(s)	282
MroXI	GAANNNNTTC	1 cut(s)	879
MscI	TGGCCA	1 cut(s)	282
MseI	TTAA	3 cut(s)	1037, 1080, 1683
MslI	CAYNNNNRTG	2 cut(s)	827, 2129
Msp20I	TGGCCA	1 cut(s)	282
MspA1I	CMGCKG	1 cut(s)	2034
MspI	CCGG	2 cut(s)	527, 1721
MspR9I	CCNGG	6 cut(s)	247, 510, 1027, 1300, 1716, 2025
MunI	CAATTG	1 cut(s)	1175
MvaI	CCWGG	6 cut(s)	247, 510, 1027, 1300, 1716, 2025
MvnI	CGCG	1 cut(s)	893
MwoI	GCNNNNNNNGC	8 cut(s)	288, 297, 1217, 1349, 1699, 1807, 1850, 1880
NdeI	CATATG	1 cut(s)	268
NheI	GCTAGC	3 cut(s)	134, 1844, 2146
NlaIV	GGNNCC	2 cut(s)	525, 1908
NspI	RCATGY	1 cut(s)	1588
NspV	TTCGAA	3 cut(s)	762, 1423, 1448
PaeI	GCATGC	1 cut(s)	1588
PceI	AGGCCT	1 cut(s)	1303
PciSI	GCTCTTC	1 cut(s)	1839
PdmI	GAANNNNTTC	1 cut(s)	879
PfeI	GAWTC	3 cut(s)	573, 1140, 1789
PfoI	TCCNGGA	1 cut(s)	1025
PinAI	ACCGGT	1 cut(s)	526
PkrI	GCNGC	5 cut(s)	86, 140, 1354, 2030, 2033
PleI	GAGTC	2 cut(s)	214, 2028
PpsI	GAGTC	2 cut(s)	214, 2028
Ppu21I	YACGTR	1 cut(s)	998
PsiI	TTATAA	1 cut(s)	75
Psp124BI	GAGCTC	1 cut(s)	1834
Psp6I	CCWGG	6 cut(s)	245, 508, 1025, 1298, 1714, 2023
PspFI	CCCAGC	2 cut(s)	1817, 2034
PspGI	CCWGG	6 cut(s)	245, 508, 1025, 1298, 1714, 2023
PspN4I	GGNNCC	2 cut(s)	525, 1908
PspPI	GGNCC	1 cut(s)	1718
PstI	CTGCAG	1 cut(s)	2033
PstNI	CAGNNNCTG	1 cut(s)	1894
PsuI	RGATCY	2 cut(s)	1374, 1479
PvuII	CAGCTG	1 cut(s)	2034
RsaI	GTAC	2 cut(s)	409, 743
RsaNI	GTAC	2 cut(s)	408, 742
RseI	CAYNNNNRTG	2 cut(s)	827, 2129
SacI	GAGCTC	1 cut(s)	1834
SapI	GCTCTTC	1 cut(s)	1839
SaqAI	TTAA	3 cut(s)	1037, 1080, 1683
SatI	GCNGC	5 cut(s)	85, 139, 1353, 2029, 2032
Sau96I	GGNCC	1 cut(s)	1718
SchI	GAGTC	2 cut(s)	215, 2029
ScrFI	CCNGG	6 cut(s)	247, 510, 1027, 1300, 1716, 2025
SduI	GDGCHC	5 cut(s)	1332, 1812, 1834, 1855, 1911
SfcI	CTRYAG	2 cut(s)	58, 2029
SfuI	TTCGAA	3 cut(s)	762, 1423, 1448
SinI	GGWCC	1 cut(s)	1718
SmiMI	CAYNNNNRTG	2 cut(s)	827, 2129
SmlI	CTYRAG	2 cut(s)	102, 1144
SmoI	CTYRAG	2 cut(s)	102, 1144
SnaBI	TACGTA	1 cut(s)	998
SpeI	ACTAGT	1 cut(s)	1657
SphI	GCATGC	1 cut(s)	1588
SseBI	AGGCCT	1 cut(s)	1303
SsiI	CCGC	5 cut(s)	520, 566, 584, 1341, 1353
SspMI	CTAG	9 cut(s)	135, 288, 678, 1161, 1223, 1658, 1769, 1845, 2147
SstI	GAGCTC	1 cut(s)	1834
StuI	AGGCCT	1 cut(s)	1303
StyD4I	CCNGG	6 cut(s)	245, 508, 1025, 1298, 1714, 2023
StyI	CCWWGG	1 cut(s)	1750
TaaI	ACNGT	4 cut(s)	500, 712, 1086, 1510
TaiI	ACGT	4 cut(s)	73, 333, 1000, 1864
TauI	GCSGC	1 cut(s)	1355
TfiI	GAWTC	3 cut(s)	573, 1140, 1789
Tru1I	TTAA	3 cut(s)	1037, 1080, 1683
Tru9I	TTAA	3 cut(s)	1037, 1080, 1683
TscAI	CASTG	5 cut(s)	457, 521, 1330, 1339, 1395
TseI	GCWGC	4 cut(s)	84, 138, 2028, 2031
TspGWI	ACGGA	1 cut(s)	29
TspRI	CASTG	5 cut(s)	457, 521, 1330, 1339, 1395
VpaK11BI	GGWCC	1 cut(s)	1718
XapI	RAATTY	4 cut(s)	682, 937, 1030, 1999
XceI	RCATGY	1 cut(s)	1588
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1550, 2031
XmiI	GTMKAC	1 cut(s)	98
XmnI	GAANNNNTTC	1 cut(s)	879
XspI	CTAG	9 cut(s)	135, 288, 678, 1161, 1223, 1658, 1769, 1845, 2147

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.