Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0014592

Physical Location & Seq

Genomic Coordinates Forward (+)

72193618 .. 72195812

Gene Structure 2195 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00051540.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2127 bp

ATGCCAACAAAACTCCAAACTACAACCAACCTTTTCCATAAACACTTCCTCAGCTATAGCTTCCCACGTTATAAGGCTCGCTGCTCATATTTGTCTACTCAAGCATACTATGACTTCCAAAGCAGAAAAGCTAGCAGCTTTCTTGTTTACTGCAACTCCCAAATCACTAAAAGTGGAAGAAATGGTGATCTCAAACAAGCTGAGTCGATTTTCAATCGTATGCCAACTAAGGACACTATCACCTGGACTGCCATGCTTACTGCGTACGCAGAGAATGGCCAAACTAGCCTGGCACGCAAGGTGTTCGATGAAATGCCCCAACGAAACATAGCATCATATAATGCGATGATCACGGGTTATATTCGGAGCAAAGGTAATGTAGATGAAGCTTTTGGGTTGTTTTGTACGATGCCTGAGCGTAATGTGGTGTCTTATAGTGTGATGATCACTGGTTTCGTAAAGGCGTGGATGTTCGACGAGGCTGAGAGGCTTTACTGTGAGATGCCAGTTCAGTGGCGGGAACCGGTTTGTTCAAATGCGTTGATAAATGGGTATTTGAAGGCAGGAAGAATCGAAGAGGCGGTTAGAGTTTTCGAGGGAATGGCAGTGAGAAATGTGGTTTCTGAGAGTTGTATGGTTGATGGGTATTGCAAACTGGGAAGGATTGATGATGCTAGAAATTTGTTTGATGTGATGCTGGAGAGGACTGTGGTTACTTGGACGGCAATGATTGATGGGTACATGAAGAAGGGAATGTTCGAAAGGGGTTTTGAATTGTTTTTGGATATGAGAAGGGAGGGGATAGTGGAGGTCAATTCCACTACCATGAGCATAATGTTTGACGCTTGTGGTGCTTTTGGTAGATGTGGAGAAGGGATTCAGATGCACGGGTTTGGTTTTGTAGATGAAGCTACTAAGATAATACGTATGATGAGCAAGACAAATATAGTTTCCTGGAATTCCTTAATCGCAGGTTATGTTCAATGTGCCGAAGTTGAAGTAGCTTTTAAACTGTTTGAGATGATGCCTGAAAAGGATGTAGTTTCATGGACGACCATGATATCAGGATTCTCAAGCAAGGGCATGACTAGGAAAGCCATCCAATTGTTTTTGTTGATGCCTGAGAAGGATGATGTTGCTTGGACTGCTCTAGTTTCAGGTTTTGTAAATAATGAGGAATATGAGGAGGCTCTCCATTGGTTTATCAAGATGCTTCGGAAAACAACCAGGCCTAATCCACTTACTTTGAGCAGTATGCTCAGTGCTTCAGCCAGTTTGGCCGCTCTAAATGAGGGGATGCAGATCCATTCTTTTTCACTGAAGGTGAATATGGAAAATAATTTATCTGTTCGAAATGCTCTGGTCTCAATGTATTCGAAGTGTGGGAATGTCATAGATGCCAATCGGATCTTCACAAGTATCTTTTCACCCAATACTGTTTCATTCAACTCCATGATTACTGGGTTTGCCCAAAATGGTTTTGGGGAAGAAGCCGTGAACTTGTTTTGGAGCATGCATAATGAAGGTTGCAAGCCAAACCAAATCACATTTCTGGGTGTTCTTTCAGCTTGTGTCCATGTGGGGCTGGTAAAAGAAGGACGGCAGTTTTTTAATTCGATGCAATCATTGCACCACATAGAACCAGGACCGGATCACTATGCTTGCATGGTTGATCTCCTTGGACGATCTGGCTTGCTAGATGAAGCTGTCGAGTTGATTCATTCAATGCCGTTTGAGCCCCATGCTGGGGTTTGGGGAGCTCTTCTTGGGGCTAGCAGGGCTCATTTACGTCTTGATCTTGCAGAGCTTGCAACTCAGCACCTGATCAAATTGGAGCCTGATAATGCAACCCCTTATGTGGTTTTATCCAATATATATTCTACTTTAGGGAAAGTGAAGGATGGAGACCAAGTGAGGATGACCAAGAATTCAAAAGGGATAAGGAAGAGTCCAGGCTGCAGCTGGGTTACTTTGAAGGACAAGGTTCATTTATTTCTTGCAGGAGATCAATCCCATCAGGACTTCCAAGATATTGAAGTGATACTCTGGATCATAACAATGGAAATAGGACAGCTAACTGGATCGTCCAAAGGTGATCATTCTTTGAATTGTTTTCTGCATCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1900864 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

708

Amino Acids

79.63

Weight (kDa)

6.54

Isoelectric Point (pI)

36.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	77 - 110	1e-06	PPR repeat family
PPR	PF01535	80 - 110	3.7e-06	PPR repeat
PPR_2	PF13041	109 - 142	1.2e-06	PPR repeat family
PPR	PF01535	143 - 168	7.2e-06	PPR repeat
PPR_1	PF12854	206 - 232	5.5e-06	PPR repeat
PPR_2	PF13041	236 - 283	7.4e-13	PPR repeat family
PPR	PF01535	238 - 268	5.5e-09	PPR repeat
PPR_2	PF13041	315 - 346	1.6e-06	PPR repeat family
PPR	PF01535	317 - 346	9.9e-06	PPR repeat
PPR	PF01535	348 - 376	1.9e-06	PPR repeat
PPR_2	PF13041	377 - 422	1.6e-07	PPR repeat family
PPR_2	PF13041	477 - 525	3e-11	PPR repeat family
PPR	PF01535	480 - 510	2.8e-07	PPR repeat
E_motif	PF20431	598 - 656	3.5e-15	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014592)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53600 AT1G53600
fragaria_vesca	FvH4_3g16920
malus_domestica	MD03G1255800.v1.1
prunus_persica	Prupe.4G151400_v2.0.a1
pyrus_communis	pycom03g20240
rosa_chinensis	RchiOBHm_Chr5g0028141
rosa_laevigata	RLG00000033071
rosa_multiflora	Rmu_co8381305.1_g000001 Rmu_sc0002598.1_g000012
rosa_roxburghii	Rroxscaffold_1G00051540
rosa_rugosa	Rorug05G0104400
rosa_samantha	Rh5AG197600 Rh5BG196200 Rh5CG216200 Rh5DG197900
rosa_wichuraiana	Rw5G018060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	72
Acc36I	ACCTGC	1 cut(s)	962
AccBSI	CCGCTC	1 cut(s)	1283
AccI	GTMKAC	1 cut(s)	95
AciI	CCGC	3 cut(s)	517, 581, 1281
AclWI	GGATC	5 cut(s)	1297, 1415, 1659, 2057, 2089
AcoI	YGGCCR	2 cut(s)	277, 1278
AcsI	RAATTY	3 cut(s)	679, 958, 1927
AcuI	CTGAAG	2 cut(s)	1251, 1340
AfaI	GTAC	3 cut(s)	266, 406, 740
AfiI	CCNNNNNNNGG	4 cut(s)	1745, 1746, 1747, 1858
AgeI	ACCGGT	1 cut(s)	523
AjnI	CCWGG	6 cut(s)	242, 288, 953, 1226, 1642, 1951
AjuI	GAANNNNNNNTTGG	4 cut(s)	1394, 1426, 1533, 1565
Alw21I	GWGCWC	1 cut(s)	1762
Alw26I	GTCTC	2 cut(s)	1369, 1899
AlwI	GGATC	5 cut(s)	1297, 1415, 1659, 2057, 2089
AlwNI	CAGNNNCTG	1 cut(s)	1822
AoxI	GGCC	3 cut(s)	277, 1229, 1278
ApeKI	GCWGC	4 cut(s)	81, 135, 1956, 1959
ApoI	RAATTY	3 cut(s)	679, 958, 1927
AsiGI	ACCGGT	1 cut(s)	523
Asp700I	GAANNNNTTC	1 cut(s)	876
AspS9I	GGNCC	1 cut(s)	1646
AsuHPI	GGTGA	5 cut(s)	197, 232, 1336, 1419, 2105
AsuII	TTCGAA	3 cut(s)	759, 1351, 1376
AsuNHI	GCTAGC	2 cut(s)	131, 1772
AvaII	GGWCC	1 cut(s)	1646
BalI	TGGCCA	1 cut(s)	279
BanII	GRGCYC	3 cut(s)	1740, 1762, 1783
Bbv12I	GWGCWC	1 cut(s)	1762
BbvCI	CCTCAGC	1 cut(s)	50
BbvI	GCAGC	4 cut(s)	68, 147, 1943, 1971
BccI	CCATC	5 cut(s)	635, 728, 1106, 1895, 2022
BceAI	ACGGC	4 cut(s)	738, 1478, 1616, 1714
BcgI	CGANNNNNNTGC	2 cut(s)	286, 320
BciT130I	CCWGG	6 cut(s)	244, 290, 955, 1228, 1644, 1953
BclI	TGATCA	4 cut(s)	348, 444, 1824, 2095
BcoDI	GTCTC	2 cut(s)	1369, 1899
BfaI	CTAG	7 cut(s)	132, 285, 675, 1089, 1151, 1697, 1773
BfmI	CTRYAG	2 cut(s)	55, 1957
BfuAI	ACCTGC	1 cut(s)	962
BglI	GCCNNNNNGGC	1 cut(s)	1277
BisI	GCNGC	5 cut(s)	82, 136, 1281, 1957, 1960
BlsI	GCNGC	5 cut(s)	83, 137, 1282, 1958, 1961
Bme1390I	CCNGG	6 cut(s)	244, 290, 955, 1228, 1644, 1953
Bme18I	GGWCC	1 cut(s)	1646
BmgT120I	GGNCC	1 cut(s)	1646
BmiI	GGNNCC	2 cut(s)	522, 1836
BmrFI	CCNGG	6 cut(s)	244, 290, 955, 1228, 1644, 1953
BmrI	ACTGGG	2 cut(s)	665, 1470
BmtI	GCTAGC	2 cut(s)	135, 1776
BmuI	ACTGGG	2 cut(s)	665, 1470
BpmI	CTGGAG	1 cut(s)	719
Bpu10I	CCTNAGC	2 cut(s)	50, 414
Bpu14I	TTCGAA	3 cut(s)	759, 1351, 1376
BpuEI	CTTGAG	2 cut(s)	84, 1057
BsaAI	YACGTR	1 cut(s)	926
BsaBI	GATNNNNATC	2 cut(s)	1301, 1401
BsaI	GGTCTC	2 cut(s)	1369, 1899
BsaJI	CCNNGG	1 cut(s)	1678
BsaWI	WCCGGW	2 cut(s)	523, 1648
BsaXI	ACNNNNNCTCC	6 cut(s)	140, 170, 358, 388, 1896, 1926
Bsc4I	CCNNNNNNNGG	4 cut(s)	1745, 1746, 1747, 1858
Bse118I	RCCGGY	1 cut(s)	523
Bse1I	ACTGG	6 cut(s)	454, 506, 660, 1272, 1465, 2083
Bse3DI	GCAATG	2 cut(s)	732, 1625
Bse8I	GATNNNNATC	2 cut(s)	1301, 1401
BseBI	CCWGG	6 cut(s)	244, 290, 955, 1228, 1644, 1953
BseDI	CCNNGG	1 cut(s)	1678
BseGI	GGATG	7 cut(s)	474, 1042, 1098, 1135, 1302, 1906, 1923
BseJI	GATNNNNATC	2 cut(s)	1301, 1401
BseLI	CCNNNNNNNGG	4 cut(s)	1745, 1746, 1747, 1858
BseMI	GCAATG	2 cut(s)	732, 1625
BseMII	CTCAG	8 cut(s)	64, 192, 405, 474, 615, 1113, 1273, 1829
BseNI	ACTGG	6 cut(s)	454, 506, 660, 1272, 1465, 2083
BseRI	GAGGAG	1 cut(s)	1199
BseXI	GCAGC	4 cut(s)	68, 147, 1943, 1971
BseYI	CCCAGC	2 cut(s)	1745, 1962
BshFI	GGCC	3 cut(s)	279, 1231, 1280
BshTI	ACCGGT	1 cut(s)	523
BsiHKAI	GWGCWC	1 cut(s)	1762
BsiSI	CCGG	2 cut(s)	524, 1649
BsiWI	CGTACG	1 cut(s)	264
BslI	CCNNNNNNNGG	4 cut(s)	1745, 1746, 1747, 1858
BsmAI	GTCTC	2 cut(s)	1369, 1899
BsnI	GGCC	3 cut(s)	279, 1231, 1280
Bso31I	GGTCTC	2 cut(s)	1369, 1899
Bsp119I	TTCGAA	3 cut(s)	759, 1351, 1376
Bsp1286I	GDGCHC	3 cut(s)	1740, 1762, 1783
BspACI	CCGC	3 cut(s)	517, 581, 1281
BspANI	GGCC	3 cut(s)	279, 1231, 1280
BspCNI	CTCAG	8 cut(s)	63, 193, 406, 475, 616, 1114, 1272, 1828
BspLI	GGNNCC	2 cut(s)	522, 1836
BspMAI	CTGCAG	1 cut(s)	1961
BspMI	ACCTGC	1 cut(s)	962
BspOI	GCTAGC	2 cut(s)	135, 1776
BspPI	GGATC	5 cut(s)	1297, 1415, 1659, 2057, 2089
BspQI	GCTCTTC	1 cut(s)	1767
BspT104I	TTCGAA	3 cut(s)	759, 1351, 1376
BspTNI	GGTCTC	2 cut(s)	1369, 1899
BsrBI	CCGCTC	1 cut(s)	1283
BsrDI	GCAATG	2 cut(s)	732, 1625
BsrFI	RCCGGY	1 cut(s)	523
BsrI	ACTGG	6 cut(s)	454, 506, 660, 1272, 1465, 2083
BssAI	RCCGGY	1 cut(s)	523
BssECI	CCNNGG	1 cut(s)	1678
BssT1I	CCWWGG	1 cut(s)	1678
Bst2UI	CCWGG	6 cut(s)	244, 290, 955, 1228, 1644, 1953
Bst4CI	ACNGT	4 cut(s)	497, 709, 1014, 1438
Bst6I	CTCTTC	3 cut(s)	570, 1767, 1940
BstAPI	GCANNNNNTGC	2 cut(s)	1627, 1808
BstBAI	YACGTR	1 cut(s)	926
BstBI	TTCGAA	3 cut(s)	759, 1351, 1376
BstC8I	GCNNGC	9 cut(s)	79, 133, 295, 1514, 1532, 1663, 1694, 1774, 1809
BstF5I	GGATG	7 cut(s)	474, 1042, 1098, 1135, 1302, 1906, 1923
BstMAI	GTCTC	2 cut(s)	1369, 1899
BstMWI	GCNNNNNNNGC	9 cut(s)	285, 294, 851, 1145, 1277, 1627, 1735, 1778, 1808
BstNI	CCWGG	6 cut(s)	244, 290, 955, 1228, 1644, 1953
BstNSI	RCATGY	1 cut(s)	1516
BstSCI	CCNGG	6 cut(s)	242, 288, 953, 1226, 1642, 1951
BstSFI	CTRYAG	2 cut(s)	55, 1957
BstSNI	TACGTA	1 cut(s)	926
BstV1I	GCAGC	4 cut(s)	68, 147, 1943, 1971
BstX2I	RGATCY	2 cut(s)	1302, 1407
BstXI	CCANNNNNNTGG	1 cut(s)	513
BstYI	RGATCY	2 cut(s)	1302, 1407
BsuRI	GGCC	3 cut(s)	279, 1231, 1280
BtgZI	GCGATG	1 cut(s)	359
BtsCI	GGATG	7 cut(s)	474, 1042, 1098, 1135, 1302, 1906, 1923
BtsI	GCAGTG	1 cut(s)	612
BtsIMutI	CAGTG	5 cut(s)	447, 518, 612, 1267, 1316
BveI	ACCTGC	1 cut(s)	962
Cac8I	GCNNGC	9 cut(s)	79, 133, 295, 1514, 1532, 1663, 1694, 1774, 1809
CaiI	CAGNNNCTG	1 cut(s)	1822
Cfr10I	RCCGGY	1 cut(s)	523
Cfr13I	GGNCC	1 cut(s)	1646
CseI	GACGC	1 cut(s)	851
Csp6I	GTAC	3 cut(s)	265, 405, 739
CspAI	ACCGGT	1 cut(s)	523
CspCI	CAANNNNNGTGG	2 cut(s)	1227, 1262
CviQI	GTAC	3 cut(s)	265, 405, 739
DraI	TTTAAA	1 cut(s)	1009
EaeI	YGGCCR	2 cut(s)	277, 1278
Eam1104I	CTCTTC	3 cut(s)	570, 1767, 1940
EarI	CTCTTC	3 cut(s)	570, 1767, 1940
Ecl136II	GAGCTC	1 cut(s)	1760
Eco105I	TACGTA	1 cut(s)	926
Eco130I	CCWWGG	1 cut(s)	1678
Eco147I	AGGCCT	1 cut(s)	1231
Eco24I	GRGCYC	3 cut(s)	1740, 1762, 1783
Eco31I	GGTCTC	2 cut(s)	1369, 1899
Eco32I	GATATC	1 cut(s)	1062
Eco47I	GGWCC	1 cut(s)	1646
Eco53kI	GAGCTC	1 cut(s)	1760
Eco57I	CTGAAG	2 cut(s)	1251, 1340
EcoICRI	GAGCTC	1 cut(s)	1760
EcoRI	GAATTC	2 cut(s)	958, 1927
EcoRII	CCWGG	6 cut(s)	242, 288, 953, 1226, 1642, 1951
EcoRV	GATATC	1 cut(s)	1062
EcoT14I	CCWWGG	1 cut(s)	1678
EcoT22I	ATGCAT	1 cut(s)	1518
EcoT38I	GRGCYC	3 cut(s)	1740, 1762, 1783
ErhI	CCWWGG	1 cut(s)	1678
FauI	CCCGC	1 cut(s)	510
FbaI	TGATCA	4 cut(s)	348, 444, 1824, 2095
FblI	GTMKAC	1 cut(s)	95
Fnu4HI	GCNGC	5 cut(s)	82, 136, 1281, 1957, 1960
FokI	GGATG	7 cut(s)	481, 1049, 1085, 1142, 1309, 1913, 1930
FriOI	GRGCYC	3 cut(s)	1740, 1762, 1783
Fsp4HI	GCNGC	5 cut(s)	82, 136, 1281, 1957, 1960
FspBI	CTAG	7 cut(s)	132, 285, 675, 1089, 1151, 1697, 1773
GluI	GCNGC	5 cut(s)	82, 136, 1281, 1957, 1960
GsaI	CCCAGC	2 cut(s)	1749, 1966
GsuI	CTGGAG	1 cut(s)	719
HaeIII	GGCC	3 cut(s)	279, 1231, 1280
HapII	CCGG	2 cut(s)	524, 1649
HgaI	GACGC	1 cut(s)	851
HindIII	AAGCTT	1 cut(s)	387
HinfI	GANTC	6 cut(s)	203, 570, 877, 1068, 1717, 1948
HpaII	CCGG	2 cut(s)	524, 1649
HphI	GGTGA	5 cut(s)	197, 232, 1336, 1419, 2105
Hpy166II	GTNNAC	3 cut(s)	96, 148, 1498
Hpy188I	TCNGA	5 cut(s)	366, 625, 882, 1218, 1407
Hpy188III	TCNNGA	5 cut(s)	1065, 1207, 1793, 2018, 2047
Hpy8I	GTNNAC	3 cut(s)	96, 148, 1498
Hpy99I	CGWCG	1 cut(s)	479
HpyCH4III	ACNGT	4 cut(s)	497, 709, 1014, 1438
HpyCH4IV	ACGT	3 cut(s)	67, 925, 1789
HpyF10VI	GCNNNNNNNGC	9 cut(s)	285, 294, 851, 1145, 1277, 1627, 1735, 1778, 1808
HpySE526I	ACGT	3 cut(s)	67, 925, 1789
Ksp22I	TGATCA	4 cut(s)	348, 444, 1824, 2095
LguI	GCTCTTC	1 cut(s)	1767
LmnI	GCTCC	4 cut(s)	366, 1509, 1757, 1834
Lsp1109I	GCAGC	4 cut(s)	68, 147, 1943, 1971
MaeI	CTAG	7 cut(s)	132, 285, 675, 1089, 1151, 1697, 1773
MaeII	ACGT	3 cut(s)	67, 925, 1789
MaeIII	GTNAC	2 cut(s)	712, 1966
MbiI	CCGCTC	1 cut(s)	1283
MboII	GAAGA	8 cut(s)	189, 579, 587, 757, 1402, 1499, 1754, 1957
MfeI	CAATTG	1 cut(s)	1103
MflI	RGATCY	2 cut(s)	1302, 1407
MhlI	GDGCHC	3 cut(s)	1740, 1762, 1783
MlsI	TGGCCA	1 cut(s)	279
MluNI	TGGCCA	1 cut(s)	279
MlyI	GAGTC	2 cut(s)	212, 1957
Mox20I	TGGCCA	1 cut(s)	279
Mph1103I	ATGCAT	1 cut(s)	1518
MroXI	GAANNNNTTC	1 cut(s)	876
MscI	TGGCCA	1 cut(s)	279
MseI	TTAA	3 cut(s)	965, 1008, 1611
MslI	CAYNNNNRTG	2 cut(s)	824, 2057
Msp20I	TGGCCA	1 cut(s)	279
MspA1I	CMGCKG	1 cut(s)	1962
MspI	CCGG	2 cut(s)	524, 1649
MspR9I	CCNGG	6 cut(s)	244, 290, 955, 1228, 1644, 1953
MunI	CAATTG	1 cut(s)	1103
MvaI	CCWGG	6 cut(s)	244, 290, 955, 1228, 1644, 1953
MwoI	GCNNNNNNNGC	9 cut(s)	285, 294, 851, 1145, 1277, 1627, 1735, 1778, 1808
NheI	GCTAGC	2 cut(s)	131, 1772
NlaIV	GGNNCC	2 cut(s)	522, 1836
NsiI	ATGCAT	1 cut(s)	1518
NspI	RCATGY	1 cut(s)	1516
NspV	TTCGAA	3 cut(s)	759, 1351, 1376
PaeI	GCATGC	1 cut(s)	1516
PceI	AGGCCT	1 cut(s)	1231
PciSI	GCTCTTC	1 cut(s)	1767
PdmI	GAANNNNTTC	1 cut(s)	876
PfeI	GAWTC	4 cut(s)	570, 877, 1068, 1717
Pfl23II	CGTACG	1 cut(s)	264
PfoI	TCCNGGA	1 cut(s)	953
PinAI	ACCGGT	1 cut(s)	523
PkrI	GCNGC	5 cut(s)	83, 137, 1282, 1958, 1961
PleI	GAGTC	2 cut(s)	211, 1956
PpsI	GAGTC	2 cut(s)	211, 1956
Ppu21I	YACGTR	1 cut(s)	926
PsiI	TTATAA	1 cut(s)	72
Psp124BI	GAGCTC	1 cut(s)	1762
Psp6I	CCWGG	6 cut(s)	242, 288, 953, 1226, 1642, 1951
PspFI	CCCAGC	2 cut(s)	1745, 1962
PspGI	CCWGG	6 cut(s)	242, 288, 953, 1226, 1642, 1951
PspLI	CGTACG	1 cut(s)	264
PspN4I	GGNNCC	2 cut(s)	522, 1836
PspPI	GGNCC	1 cut(s)	1646
PstI	CTGCAG	1 cut(s)	1961
PstNI	CAGNNNCTG	1 cut(s)	1822
PsuI	RGATCY	2 cut(s)	1302, 1407
PvuII	CAGCTG	1 cut(s)	1962
RsaI	GTAC	3 cut(s)	266, 406, 740
RsaNI	GTAC	3 cut(s)	265, 405, 739
RseI	CAYNNNNRTG	2 cut(s)	824, 2057
SacI	GAGCTC	1 cut(s)	1762
SapI	GCTCTTC	1 cut(s)	1767
SaqAI	TTAA	3 cut(s)	965, 1008, 1611
SatI	GCNGC	5 cut(s)	82, 136, 1281, 1957, 1960
Sau96I	GGNCC	1 cut(s)	1646
SchI	GAGTC	2 cut(s)	212, 1957
ScrFI	CCNGG	6 cut(s)	244, 290, 955, 1228, 1644, 1953
SduI	GDGCHC	3 cut(s)	1740, 1762, 1783
SfcI	CTRYAG	2 cut(s)	55, 1957
SfuI	TTCGAA	3 cut(s)	759, 1351, 1376
SinI	GGWCC	1 cut(s)	1646
SmiMI	CAYNNNNRTG	2 cut(s)	824, 2057
SmlI	CTYRAG	2 cut(s)	99, 1072
SmoI	CTYRAG	2 cut(s)	99, 1072
SnaBI	TACGTA	1 cut(s)	926
SphI	GCATGC	1 cut(s)	1516
SseBI	AGGCCT	1 cut(s)	1231
SsiI	CCGC	3 cut(s)	517, 581, 1281
SspMI	CTAG	7 cut(s)	132, 285, 675, 1089, 1151, 1697, 1773
SstI	GAGCTC	1 cut(s)	1762
StuI	AGGCCT	1 cut(s)	1231
StyD4I	CCNGG	6 cut(s)	242, 288, 953, 1226, 1642, 1951
StyI	CCWWGG	1 cut(s)	1678
TaaI	ACNGT	4 cut(s)	497, 709, 1014, 1438
TaiI	ACGT	3 cut(s)	70, 928, 1792
TauI	GCSGC	1 cut(s)	1283
TfiI	GAWTC	4 cut(s)	570, 877, 1068, 1717
Tru1I	TTAA	3 cut(s)	965, 1008, 1611
Tru9I	TTAA	3 cut(s)	965, 1008, 1611
TscAI	CASTG	5 cut(s)	454, 518, 612, 1267, 1323
TseI	GCWGC	4 cut(s)	81, 135, 1956, 1959
TspRI	CASTG	5 cut(s)	454, 518, 612, 1267, 1323
VpaK11BI	GGWCC	1 cut(s)	1646
XapI	RAATTY	3 cut(s)	679, 958, 1927
XceI	RCATGY	1 cut(s)	1516
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1478, 1959
XmiI	GTMKAC	1 cut(s)	95
XmnI	GAANNNNTTC	1 cut(s)	876
XspI	CTAG	7 cut(s)	132, 285, 675, 1089, 1151, 1697, 1773
Zsp2I	ATGCAT	1 cut(s)	1518

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.