FvH4_3g18790

Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0012596
Physical Location & Seq
Reverse (-)
12073228 .. 12078202
4975 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g18790.t1

Sequence Viewer

Length: 2193 bp
ATGAACACACTCAGCAAAAATGCTGCATATTTCATTTTGGTTCTTTTTGCAGCATTATTAGTCCAAGTCAGAGGCCGTTCTTTTCGATATATTGCTACTGTTACAACAACTGCTCAATCGGTTTCAGACGGTGTTGATGATCATCATCATCATAATGTTGGATTCAACCATAGTAACGGAACGATCAGAAGCTCCTTCCAACTTCTCAAAGGAATTGAAGCCGAGTCTAACGAGACCTGTGAGCAACTGTACGGGTTCTTGCCGTGCTCGGACAGTGTTTACGGGCATGTGTTCTTGATGGTGGTGTATGAGTACTTGCTGTTCCATGGAGAGTCGTATTTGGCCGCCGGTGGTGAGCAGATCTTCAAGATTCTGGGTCCTGGTGTCTTCGGTGCCAGTGCTTTCCATGTCCTCGGCGCCCTCCCAGAGTCTTTGTTGCTTCTTGCTTCTGGATTCTTTAACACGAAGGAGATTGCTGAAGATTATGTGTACACTGGGGTTGGATTGTTGGCTGGAACATCAATTTTGCTTCTAACAGTGCTTTGGGGGACTTGTGTAATTGTTGGCCGGCAACACTTCACAAGTTGTAATGATGCAAATTCTTCAACAGCTTTTTCATGGGAAAGAATACTTGCGTTATTGACAAATTGCGGTATTACAATTGATATGGAGACCAGCGTCCTCGCAAGGATCATGATTTTCTCAGTGATTCCATTTCTCATAATGCAAATCCCCAATATCTTTCACTCCTCCTCTGCGGAAAACATTTTTATCTTGATTGCTCTCAGTGTTTCCATCATATTCCTATTGCTGTACTTCATTTATCAGGTCTTCCGGCCCTGGGTTCAAAAAAGAAGATTAGAATTTGTGAAACATGGGCATTTGGTATCAGACATTTTACAGCATGTGCAAAAACATGCACTAGGGAGAATCCTCACAGTCCAAGGAGCACCTAACGTACGTGCCATACGAAGGCTATTTGAGGAAATGGATGAAGATGGTGACAATCATATATCAATTCCTGAAGTAAAGAAACTTCTTCAGGAAATCCAATTCACATCATTGGAAAATGATGAGGACAAAGGAATAGCAGAAGTGATGCAAAAGTTTGACGTCGATAACGATGGAAAAATTAGTAAAGATGAATTTATGAATGGCTTCACAAAATGGCTTGATGTGTACAAGTCACTGCATAAAGAAAATACCGAAAGATCGTTGGAGGACATGTATCAGGTCTTTCAACCTTGGATTCAAAATAGAAGAAAAGAACGGGAAATGAAGACAAATTTGATGTCAGAAGTATTAAGACACATCCAGGGCAATTCATCAGTTGGAGCGATTCTCACAGAGAATGGCATGCCTCATAAGGACAATATTAGAAGCTTGTTTGAACAGATTGATCGTGATGGAAATAACAATATATCAGAAGCAGAACTAAGAGAACTGATCATGAACATCAAGTCTGGTAACATTCCACTTGACGTGGATGAATCAGTTAACAAATTGGTAGAAGAACTTGACACAAGCGGAGACCATATGATTAATGAGGAAGAATTCGTTACTGGTTTAACAAAATGGATGAATAAATCCCATGATTCCCAAGGTCTTCCCTCATTAGAGTCGGAGGATGATCTCTACCAAAGAACTTGGGATGCAACAGATAAGTTGGTGGATGAAGAGACTAGCAGCGGTAGACCTGTTGACAAGTCATTATGGGGTTGGTTCAAAGCCATTTCATATATGGTGATCGGGTTTGTTGTACTAGCAGTTCTAGCAGAACCTCTCATAGATAATGTTCAGGACTTCTCCACAGCTGCAGGAATACCTTCTTTCTTCGTAGCATTCGTGCTTGTCCCGTTAGCAACCAATGCTAGACAAGCAGCTTCAGCAATCAGTGCAGCAAGTCGCCAAACACCAAGAACCACAGATTTGACATTTTCAGAGATTTATGGTGGGGTTTTTATGAACAATGTGCTGGGATTTTCTGTGCTTCTGGCCATAATTTATGTTCGTGAAATGACATGGGAATTCTCTGCAGAAGTGTTAGTGGTTCTGATAGTCTGCCTTGTGGTAGGTCTCATTGCAAGTGTGAGATCGACCTTTCCTCTCTGGACAGCATTCGTTGCCTTCTTGCTCTACCCACTATCATTGCTTCTAGTCTATATTCTCAATGATGTCATCGGTTATACCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EF-hand_7 EF-hand_8 Na_Ca_ex

Protein Analysis

731

Amino Acids

81.91

Weight (kDa)

5.05

Isoelectric Point (pI)

36.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EF-hand_7 PF13499 322 - 387 9.8e-13 EF-hand domain pair
EF-hand_1 PF00036 364 - 389 1.7e-06 EF hand domain
EF-hand_5 PF13202 364 - 385 6.5e-06 EF hand
EF-hand_7 PF13499 457 - 521 1.5e-11 EF-hand domain pair
Na_Ca_ex PF01699 578 - 721 6.3e-15 Sodium/calcium exchanger protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1116
AccB1I GGYRCC 2 cut(s) 392, 416
AccI GTMKAC 1 cut(s) 1693
AciI CCGC 5 cut(s) 345, 651, 758, 1527, 1689
AclWI GGATC 1 cut(s) 698
AcoI YGGCCR 3 cut(s) 342, 565, 1995
AcsI RAATTY 6 cut(s) 598, 863, 1145, 1285, 1553, 2027
AcuI CTGAAG 4 cut(s) 498, 1025, 1044, 1869
AcyI GRCGYC 2 cut(s) 417, 1113
AfaI GTAC 7 cut(s) 251, 314, 491, 815, 960, 1181, 1761
AfiI CCNNNNNNNGG 2 cut(s) 841, 972
AflIII ACRYGT 1 cut(s) 1224
AgsI TTSAA 9 cut(s) 166, 218, 367, 606, 848, 1241, 1253, 1391, 1726
AjiI CACGTC 1 cut(s) 1483
AjnI CCWGG 3 cut(s) 379, 839, 1314
AluBI AGCT 5 cut(s) 192, 611, 1383, 1814, 1883
AluI AGCT 5 cut(s) 192, 611, 1383, 1814, 1883
Alw21I GWGCWC 2 cut(s) 269, 952
Alw26I GTCTC 5 cut(s) 227, 665, 1524, 1673, 2081
AlwI GGATC 1 cut(s) 698
AoxI GGCC 5 cut(s) 73, 342, 565, 836, 1995
ApeKI GCWGC 6 cut(s) 23, 50, 1686, 1814, 1880, 1898
ApoI RAATTY 6 cut(s) 598, 863, 1145, 1285, 1553, 2027
ArsI GACNNNNNNTTYG 2 cut(s) 1277, 1309
AseI ATTAAT 1 cut(s) 1542
Asp700I GAANNNNTTC 2 cut(s) 1157, 1825
AspLEI GCGC 1 cut(s) 419
AspS9I GGNCC 2 cut(s) 377, 837
AsuHPI GGTGA 3 cut(s) 365, 1013, 1756
AvaII GGWCC 1 cut(s) 377
BalI TGGCCA 1 cut(s) 1997
BanI GGYRCC 2 cut(s) 392, 416
BarI GAAGNNNNNNTAC 2 cut(s) 1020, 1052
BbsI GAAGAC 4 cut(s) 379, 823, 1286, 1598
Bbv12I GWGCWC 2 cut(s) 269, 952
BbvI GCAGC 6 cut(s) 10, 62, 1698, 1801, 1892, 1910
BccI CCATC 5 cut(s) 292, 803, 992, 1118, 1400
BceAI ACGGC 2 cut(s) 60, 247
BciT130I CCWGG 3 cut(s) 381, 841, 1316
BclI TGATCA 2 cut(s) 139, 1446
BcoDI GTCTC 5 cut(s) 227, 665, 1524, 1673, 2081
BfaI CTAG 6 cut(s) 923, 1683, 1763, 1772, 1872, 2156
BfmI CTRYAG 2 cut(s) 1815, 2034
BfoI RGCGCY 1 cut(s) 420
BglII AGATCT 1 cut(s) 360
BisI GCNGC 7 cut(s) 24, 51, 345, 1687, 1815, 1881, 1899
BlsI GCNGC 7 cut(s) 25, 52, 346, 1688, 1816, 1882, 1900
BmcAI AGTACT 1 cut(s) 314
Bme1390I CCNGG 3 cut(s) 381, 841, 1316
Bme18I GGWCC 1 cut(s) 377
BmgBI CACGTC 1 cut(s) 1483
BmgT120I GGNCC 2 cut(s) 377, 837
BmiI GGNNCC 3 cut(s) 378, 394, 418
BmrFI CCNGG 3 cut(s) 381, 841, 1316
BmrI ACTGGG 1 cut(s) 504
BmsI GCATC 3 cut(s) 583, 1089, 1642
BmuI ACTGGG 1 cut(s) 504
BoxI GACNNNNGTC 1 cut(s) 677
BpiI GAAGAC 4 cut(s) 379, 823, 1286, 1598
BplI GAGNNNNNCTC 2 cut(s) 1326, 1358
BsaAI YACGTR 1 cut(s) 962
BsaBI GATNNNNATC 2 cut(s) 141, 144
BsaHI GRCGYC 2 cut(s) 417, 1113
BsaI GGTCTC 4 cut(s) 227, 665, 1524, 2081
BsaJI CCNNGG 8 cut(s) 325, 412, 839, 840, 943, 1244, 1315, 1600
BsaXI ACNNNNNCTCC 2 cut(s) 1211, 1241
Bsc4I CCNNNNNNNGG 2 cut(s) 841, 972
Bse118I RCCGGY 2 cut(s) 347, 567
Bse1I ACTGG 3 cut(s) 396, 499, 1567
Bse3DI GCAATG 2 cut(s) 2079, 2147
Bse8I GATNNNNATC 2 cut(s) 141, 144
BseBI CCWGG 3 cut(s) 381, 841, 1316
BseDI CCNNGG 8 cut(s) 325, 412, 839, 840, 943, 1244, 1315, 1600
BseGI GGATG 7 cut(s) 997, 1311, 1492, 1584, 1633, 1657, 1678
BseJI GATNNNNATC 2 cut(s) 141, 144
BseLI CCNNNNNNNGG 2 cut(s) 841, 972
BseMI GCAATG 2 cut(s) 2079, 2147
BseMII CTCAG 3 cut(s) 25, 717, 799
BseNI ACTGG 3 cut(s) 396, 499, 1567
BseRI GAGGAG 2 cut(s) 739, 742
BseXI GCAGC 6 cut(s) 10, 62, 1698, 1801, 1892, 1910
BseYI CCCAGC 1 cut(s) 1975
BsgI GTGCAG 1 cut(s) 1917
BshFI GGCC 5 cut(s) 75, 344, 567, 838, 1997
BshNI GGYRCC 2 cut(s) 392, 416
BsiHKAI GWGCWC 2 cut(s) 269, 952
BsiSI CCGG 3 cut(s) 348, 568, 835
BsiWI CGTACG 1 cut(s) 958
BslFI GGGAC 2 cut(s) 562, 1838
BslI CCNNNNNNNGG 2 cut(s) 841, 972
BsmAI GTCTC 5 cut(s) 227, 665, 1524, 1673, 2081
BsmFI GGGAC 2 cut(s) 562, 1838
BsmI GAATGC 2 cut(s) 1841, 2117
BsnI GGCC 5 cut(s) 75, 344, 567, 838, 1997
Bso31I GGTCTC 4 cut(s) 227, 665, 1524, 2081
Bsp1286I GDGCHC 2 cut(s) 269, 952
Bsp1407I TGTACA 2 cut(s) 489, 1179
Bsp19I CCATGG 1 cut(s) 325
BspACI CCGC 5 cut(s) 345, 651, 758, 1527, 1689
BspANI GGCC 5 cut(s) 75, 344, 567, 838, 1997
BspCNI CTCAG 3 cut(s) 24, 716, 798
BspHI TCATGA 2 cut(s) 693, 1449
BspLI GGNNCC 3 cut(s) 378, 394, 418
BspMAI CTGCAG 2 cut(s) 1819, 2038
BspPI GGATC 1 cut(s) 698
BspT107I GGYRCC 2 cut(s) 392, 416
BspTNI GGTCTC 4 cut(s) 227, 665, 1524, 2081
BsrDI GCAATG 2 cut(s) 2079, 2147
BsrFI RCCGGY 2 cut(s) 347, 567
BsrGI TGTACA 2 cut(s) 489, 1179
BsrI ACTGG 3 cut(s) 396, 499, 1567
BssAI RCCGGY 2 cut(s) 347, 567
BssECI CCNNGG 8 cut(s) 325, 412, 839, 840, 943, 1244, 1315, 1600
BssNI GRCGYC 2 cut(s) 417, 1113
BssT1I CCWWGG 4 cut(s) 325, 943, 1244, 1600
Bst2UI CCWGG 3 cut(s) 381, 841, 1316
Bst4CI ACNGT 6 cut(s) 100, 131, 249, 275, 538, 940
Bst6I CTCTTC 1 cut(s) 1671
BstACI GRCGYC 2 cut(s) 417, 1113
BstAPI GCANNNNNTGC 3 cut(s) 1868, 1895, 2123
BstAUI TGTACA 2 cut(s) 489, 1179
BstBAI YACGTR 1 cut(s) 962
BstC8I GCNNGC 2 cut(s) 569, 1358
BstDEI CTNAG 4 cut(s) 11, 703, 785, 1436
BstDSI CCRYGG 1 cut(s) 325
BstF5I GGATG 7 cut(s) 997, 1311, 1492, 1584, 1633, 1657, 1678
BstH2I RGCGCY 1 cut(s) 420
BstHHI GCGC 1 cut(s) 419
BstMAI GTCTC 5 cut(s) 227, 665, 1524, 1673, 2081
BstMWI GCNNNNNNNGC 6 cut(s) 1772, 1868, 1877, 1886, 1895, 2123
BstNI CCWGG 3 cut(s) 381, 841, 1316
BstNSI RCATGY 5 cut(s) 290, 908, 920, 1228, 1360
BstPAI GACNNNNGTC 1 cut(s) 677
BstSCI CCNGG 3 cut(s) 379, 839, 1314
BstSFI CTRYAG 2 cut(s) 1815, 2034
BstV1I GCAGC 6 cut(s) 10, 62, 1698, 1801, 1892, 1910
BstV2I GAAGAC 4 cut(s) 379, 823, 1286, 1598
BstX2I RGATCY 1 cut(s) 360
BstYI RGATCY 1 cut(s) 360
BsuRI GGCC 5 cut(s) 75, 344, 567, 838, 1997
BtgI CCRYGG 1 cut(s) 325
BtrI CACGTC 1 cut(s) 1483
BtsCI GGATG 7 cut(s) 997, 1311, 1492, 1584, 1633, 1657, 1678
BtsI GCAGTG 1 cut(s) 1187
BtsIMutI CAGTG 8 cut(s) 280, 403, 492, 543, 711, 793, 1187, 1900
Cac8I GCNNGC 2 cut(s) 569, 1358
CciI TCATGA 2 cut(s) 693, 1449
CfoI GCGC 1 cut(s) 419
Cfr10I RCCGGY 2 cut(s) 347, 567
Cfr13I GGNCC 2 cut(s) 377, 837
CseI GACGC 1 cut(s) 667
Csp6I GTAC 7 cut(s) 250, 313, 490, 814, 959, 1180, 1760
CspCI CAANNNNNGTGG 2 cut(s) 2130, 2165
CviQI GTAC 7 cut(s) 250, 313, 490, 814, 959, 1180, 1760
DdeI CTNAG 4 cut(s) 11, 703, 785, 1436
DinI GGCGCC 1 cut(s) 418
EaeI YGGCCR 3 cut(s) 342, 565, 1995
Eam1104I CTCTTC 1 cut(s) 1671
EarI CTCTTC 1 cut(s) 1671
Eco130I CCWWGG 4 cut(s) 325, 943, 1244, 1600
Eco31I GGTCTC 4 cut(s) 227, 665, 1524, 2081
Eco47I GGWCC 1 cut(s) 377
Eco57I CTGAAG 4 cut(s) 498, 1025, 1044, 1869
EcoO109I RGGNCCY 1 cut(s) 377
EcoRI GAATTC 2 cut(s) 1553, 2027
EcoRII CCWGG 3 cut(s) 379, 839, 1314
EcoT14I CCWWGG 4 cut(s) 325, 943, 1244, 1600
EgeI GGCGCC 1 cut(s) 418
EheI GGCGCC 1 cut(s) 418
ErhI CCWWGG 4 cut(s) 325, 943, 1244, 1600
FaqI GGGAC 2 cut(s) 562, 1838
FauNDI CATATG 1 cut(s) 1536
FbaI TGATCA 2 cut(s) 139, 1446
FblI GTMKAC 1 cut(s) 1693
Fnu4HI GCNGC 7 cut(s) 24, 51, 345, 1687, 1815, 1881, 1899
FokI GGATG 7 cut(s) 1004, 1298, 1499, 1591, 1640, 1664, 1685
Fsp4HI GCNGC 7 cut(s) 24, 51, 345, 1687, 1815, 1881, 1899
FspBI CTAG 6 cut(s) 923, 1683, 1763, 1772, 1872, 2156
GlaI GCGC 1 cut(s) 418
GluI GCNGC 7 cut(s) 24, 51, 345, 1687, 1815, 1881, 1899
GsaI CCCAGC 1 cut(s) 1979
HaeII RGCGCY 1 cut(s) 420
HaeIII GGCC 5 cut(s) 75, 344, 567, 838, 1997
HapII CCGG 3 cut(s) 348, 568, 835
HgaI GACGC 1 cut(s) 667
HhaI GCGC 1 cut(s) 419
Hin1I GRCGYC 2 cut(s) 417, 1113
Hin6I GCGC 1 cut(s) 417
HinP1I GCGC 1 cut(s) 417
HincII GTYRAC 2 cut(s) 1498, 1702
HindII GTYRAC 2 cut(s) 1498, 1702
HindIII AAGCTT 1 cut(s) 1381
HpaI GTTAAC 1 cut(s) 1498
HpaII CCGG 3 cut(s) 348, 568, 835
HphI GGTGA 3 cut(s) 365, 1013, 1756
Hpy166II GTNNAC 7 cut(s) 280, 490, 492, 1180, 1498, 1694, 1702
Hpy8I GTNNAC 7 cut(s) 280, 490, 492, 1180, 1498, 1694, 1702
Hpy99I CGWCG 1 cut(s) 1118
HpyAV CCTTC 5 cut(s) 205, 460, 966, 1836, 2137
HpyCH4III ACNGT 6 cut(s) 100, 131, 249, 275, 538, 940
HpyCH4IV ACGT 4 cut(s) 957, 961, 1113, 1482
HpyF10VI GCNNNNNNNGC 6 cut(s) 1772, 1868, 1877, 1886, 1895, 2123
HpyF3I CTNAG 4 cut(s) 11, 703, 785, 1436
HpySE526I ACGT 4 cut(s) 957, 961, 1113, 1482
Hsp92I GRCGYC 2 cut(s) 417, 1113
HspAI GCGC 1 cut(s) 417
KasI GGCGCC 1 cut(s) 416
KroI GCCGGC 1 cut(s) 567
KroNI GCCGGC 1 cut(s) 569
Ksp22I TGATCA 2 cut(s) 139, 1446
KspAI GTTAAC 1 cut(s) 1498
LmnI GCTCC 3 cut(s) 197, 947, 1334
Lsp1109I GCAGC 6 cut(s) 10, 62, 1698, 1801, 1892, 1910
LweI GCATC 3 cut(s) 583, 1089, 1642
MaeI CTAG 6 cut(s) 923, 1683, 1763, 1772, 1872, 2156
MaeII ACGT 4 cut(s) 957, 961, 1113, 1482
MaeIII GTNAC 6 cut(s) 100, 173, 1001, 1185, 1466, 1558
MfeI CAATTG 1 cut(s) 660
MflI RGATCY 1 cut(s) 360
MhlI GDGCHC 2 cut(s) 269, 952
MlsI TGGCCA 1 cut(s) 1997
MluNI TGGCCA 1 cut(s) 1997
Mly113I GGCGCC 1 cut(s) 417
MlyI GAGTC 4 cut(s) 233, 341, 437, 1628
MmeI TCCRAC 6 cut(s) 139, 223, 481, 1197, 1312, 1602
Mox20I TGGCCA 1 cut(s) 1997
MroNI GCCGGC 1 cut(s) 567
MroXI GAANNNNTTC 2 cut(s) 1157, 1825
MscI TGGCCA 1 cut(s) 1997
MseI TTAA 5 cut(s) 459, 1304, 1497, 1542, 1568
MslI CAYNNNNRTG 1 cut(s) 153
Msp20I TGGCCA 1 cut(s) 1997
MspA1I CMGCKG 2 cut(s) 1689, 1814
MspI CCGG 3 cut(s) 348, 568, 835
MspR9I CCNGG 3 cut(s) 381, 841, 1316
MunI CAATTG 1 cut(s) 660
Mva1269I GAATGC 2 cut(s) 1841, 2117
MvaI CCWGG 3 cut(s) 381, 841, 1316
MwoI GCNNNNNNNGC 6 cut(s) 1772, 1868, 1877, 1886, 1895, 2123
NaeI GCCGGC 1 cut(s) 569
NarI GGCGCC 1 cut(s) 417
NcoI CCATGG 1 cut(s) 325
NdeI CATATG 1 cut(s) 1536
NgoMIV GCCGGC 1 cut(s) 567
NlaIV GGNNCC 3 cut(s) 378, 394, 418
NmeAIII GCCGAG 2 cut(s) 247, 393
NmuCI GTSAC 2 cut(s) 1001, 1185
NspI RCATGY 5 cut(s) 290, 908, 920, 1228, 1360
PaeI GCATGC 1 cut(s) 1360
PagI TCATGA 2 cut(s) 693, 1449
PasI CCCWGGG 1 cut(s) 840
PciI ACATGT 1 cut(s) 1224
PcsI WCGNNNNNNNCGW 3 cut(s) 967, 1119, 1842
PctI GAATGC 2 cut(s) 1841, 2117
PdiI GCCGGC 1 cut(s) 569
PdmI GAANNNNTTC 2 cut(s) 1157, 1825
PfeI GAWTC 9 cut(s) 162, 370, 453, 709, 930, 1249, 1339, 1490, 1595
Pfl23II CGTACG 1 cut(s) 958
PkrI GCNGC 7 cut(s) 25, 52, 346, 1688, 1816, 1882, 1900
PleI GAGTC 4 cut(s) 232, 340, 436, 1627
PluTI GGCGCC 1 cut(s) 420
PpsI GAGTC 4 cut(s) 232, 340, 436, 1627
Ppu21I YACGTR 1 cut(s) 962
PpuMI RGGWCCY 1 cut(s) 377
PscI ACATGT 1 cut(s) 1224
PshAI GACNNNNGTC 1 cut(s) 677
PshBI ATTAAT 1 cut(s) 1542
Psp5II RGGWCCY 1 cut(s) 377
Psp6I CCWGG 3 cut(s) 379, 839, 1314
PspFI CCCAGC 1 cut(s) 1975
PspGI CCWGG 3 cut(s) 379, 839, 1314
PspLI CGTACG 1 cut(s) 958
PspN4I GGNNCC 3 cut(s) 378, 394, 418
PspPI GGNCC 2 cut(s) 377, 837
PspPPI RGGWCCY 1 cut(s) 377
PsrI GAACNNNNNNTAC 4 cut(s) 305, 337, 1752, 1784
PstI CTGCAG 2 cut(s) 1819, 2038
PsuI RGATCY 1 cut(s) 360
PvuII CAGCTG 1 cut(s) 1814
RsaI GTAC 7 cut(s) 251, 314, 491, 815, 960, 1181, 1761
RsaNI GTAC 7 cut(s) 250, 313, 490, 814, 959, 1180, 1760
RseI CAYNNNNRTG 1 cut(s) 153
SaqAI TTAA 5 cut(s) 459, 1304, 1497, 1542, 1568
SatI GCNGC 7 cut(s) 24, 51, 345, 1687, 1815, 1881, 1899
Sau96I GGNCC 2 cut(s) 377, 837
ScaI AGTACT 1 cut(s) 314
SchI GAGTC 4 cut(s) 233, 341, 437, 1628
ScrFI CCNGG 3 cut(s) 381, 841, 1316
SduI GDGCHC 2 cut(s) 269, 952
SfaNI GCATC 3 cut(s) 583, 1089, 1642
SfcI CTRYAG 2 cut(s) 1815, 2034
SfoI GGCGCC 1 cut(s) 418
SgrAI CRCCGGYG 1 cut(s) 347
SinI GGWCC 1 cut(s) 377
SmiMI CAYNNNNRTG 1 cut(s) 153
SphI GCATGC 1 cut(s) 1360
SsiI CCGC 5 cut(s) 345, 651, 758, 1527, 1689
SspDI GGCGCC 1 cut(s) 416
SspI AATATT 1 cut(s) 1375
SspMI CTAG 6 cut(s) 923, 1683, 1763, 1772, 1872, 2156
StyD4I CCNGG 3 cut(s) 379, 839, 1314
StyI CCWWGG 4 cut(s) 325, 943, 1244, 1600
TaaI ACNGT 6 cut(s) 100, 131, 249, 275, 538, 940
TaiI ACGT 4 cut(s) 960, 964, 1116, 1485
TaqI TCGA 3 cut(s) 85, 1116, 2096
TatI WGTACW 5 cut(s) 312, 489, 813, 1179, 1759
TauI GCSGC 1 cut(s) 347
TfiI GAWTC 9 cut(s) 162, 370, 453, 709, 930, 1249, 1339, 1490, 1595
Tru1I TTAA 5 cut(s) 459, 1304, 1497, 1542, 1568
Tru9I TTAA 5 cut(s) 459, 1304, 1497, 1542, 1568
TscAI CASTG 8 cut(s) 280, 403, 499, 543, 711, 793, 1194, 1900
TseFI GTSAC 2 cut(s) 1001, 1185
TseI GCWGC 6 cut(s) 23, 50, 1686, 1814, 1880, 1898
Tsp45I GTSAC 2 cut(s) 1001, 1185
TspGWI ACGGA 1 cut(s) 192
TspRI CASTG 8 cut(s) 280, 403, 499, 543, 711, 793, 1194, 1900
VpaK11BI GGWCC 1 cut(s) 377
VspI ATTAAT 1 cut(s) 1542
XapI RAATTY 6 cut(s) 598, 863, 1145, 1285, 1553, 2027
XceI RCATGY 5 cut(s) 290, 908, 920, 1228, 1360
XcmI CCANNNNNNNNNTGG 1 cut(s) 1738
XmiI GTMKAC 1 cut(s) 1693
XmnI GAANNNNTTC 2 cut(s) 1157, 1825
XspI CTAG 6 cut(s) 923, 1683, 1763, 1772, 1872, 2156
ZraI GACGTC 1 cut(s) 1114
ZrmI AGTACT 1 cut(s) 314
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.