Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g18790 |
| malus_domestica | MD03G1238300.v1.1 MD15G1340300.v1.1 |
| prunus_persica | Prupe.4G171600_v2.0.a1 Prupe.4G171600_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr5g0031621 |
| rosa_laevigata | RLG00000033329 |
| rosa_multiflora | Rmu_sc0002018.1_g000001 Rmu_sc0003681.1_g000001 Rmu_sc0014819.1_g000001 Rmu_sc0031913.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00048660 |
| rosa_rugosa | Rorug05G0127100 Rorug05G0127100 |
| rosa_samantha | Rh5AG220900 Rh5BG220400 Rh5CG243800 Rh5DG225200 |
| rosa_wichuraiana | Rw5G020130 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 961 |
| AccB1I | GGYRCC | 2 cut(s) | 392, 940 |
| AccI | GTMKAC | 2 cut(s) | 981, 1686 |
| AciI | CCGC | 1 cut(s) | 320 |
| AclWI | GGATC | 2 cut(s) | 499, 1116 |
| AcsI | RAATTY | 5 cut(s) | 854, 1043, 1136, 1276, 1541 |
| AcuI | CTGAAG | 3 cut(s) | 1035, 1854, 2043 |
| AfaI | GTAC | 6 cut(s) | 100, 290, 702, 806, 1293, 1667 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 747, 832 |
| AflIII | ACRYGT | 2 cut(s) | 895, 1300 |
| AgsI | TTSAA | 8 cut(s) | 343, 839, 882, 1232, 1244, 1379, 1604, 1890 |
| AjiI | CACGTC | 1 cut(s) | 1471 |
| AjnI | CCWGG | 2 cut(s) | 355, 830 |
| Alw26I | GTCTC | 6 cut(s) | 411, 656, 1461, 1512, 2066, 2083 |
| AlwI | GGATC | 2 cut(s) | 499, 1116 |
| AoxI | GGCC | 1 cut(s) | 2109 |
| ApeKI | GCWGC | 7 cut(s) | 156, 159, 220, 543, 669, 1799, 1883 |
| ApoI | RAATTY | 5 cut(s) | 854, 1043, 1136, 1276, 1541 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 239, 271 |
| AseI | ATTAAT | 1 cut(s) | 1125 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1029 |
| AspS9I | GGNCC | 1 cut(s) | 353 |
| AsuC2I | CCSGG | 2 cut(s) | 748, 1464 |
| AsuHPI | GGTGA | 3 cut(s) | 317, 341, 1004 |
| AsuNHI | GCTAGC | 1 cut(s) | 1978 |
| AvaII | GGWCC | 1 cut(s) | 353 |
| BaeGI | GKGCMC | 2 cut(s) | 397, 943 |
| BanI | GGYRCC | 2 cut(s) | 392, 940 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 91, 123, 1011, 1043 |
| BauI | CACGAG | 1 cut(s) | 1995 |
| BbsI | GAAGAC | 4 cut(s) | 99, 970, 1065, 1258 |
| BbvI | GCAGC | 7 cut(s) | 146, 168, 232, 555, 681, 1786, 1895 |
| BccI | CCATC | 6 cut(s) | 119, 745, 983, 1109, 1388, 2050 |
| BceAI | ACGGC | 1 cut(s) | 1357 |
| BciT130I | CCWGG | 2 cut(s) | 357, 832 |
| BclI | TGATCA | 1 cut(s) | 1527 |
| BcnI | CCSGG | 2 cut(s) | 748, 1464 |
| BcoDI | GTCTC | 6 cut(s) | 411, 656, 1461, 1512, 2066, 2083 |
| BfaI | CTAG | 4 cut(s) | 372, 1733, 1835, 1979 |
| BfuAI | ACCTGC | 1 cut(s) | 961 |
| BglII | AGATCT | 1 cut(s) | 819 |
| BisI | GCNGC | 8 cut(s) | 157, 160, 221, 321, 544, 670, 1800, 1884 |
| BlsI | GCNGC | 8 cut(s) | 158, 161, 222, 322, 545, 671, 1801, 1885 |
| BmcAI | AGTACT | 3 cut(s) | 100, 290, 1293 |
| Bme1390I | CCNGG | 4 cut(s) | 357, 748, 832, 1464 |
| Bme18I | GGWCC | 1 cut(s) | 353 |
| BmgBI | CACGTC | 1 cut(s) | 1471 |
| BmgT120I | GGNCC | 1 cut(s) | 353 |
| BmiI | GGNNCC | 3 cut(s) | 354, 394, 942 |
| BmrFI | CCNGG | 4 cut(s) | 357, 748, 832, 1464 |
| BmsI | GCATC | 3 cut(s) | 635, 765, 1815 |
| BmtI | GCTAGC | 1 cut(s) | 1982 |
| BpiI | GAAGAC | 4 cut(s) | 99, 970, 1065, 1258 |
| BpmI | CTGGAG | 2 cut(s) | 345, 492 |
| Bpu10I | CCTNAGC | 1 cut(s) | 453 |
| BpuMI | CCSGG | 2 cut(s) | 748, 1464 |
| Bsa29I | ATCGAT | 1 cut(s) | 195 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1107 |
| BsaI | GGTCTC | 3 cut(s) | 656, 1512, 2066 |
| BsaJI | CCNNGG | 6 cut(s) | 441, 747, 830, 831, 1235, 1842 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1160, 1190 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 747, 832 |
| Bse1I | ACTGG | 4 cut(s) | 475, 918, 1522, 1555 |
| Bse3DI | GCAATG | 2 cut(s) | 2064, 2132 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1107 |
| BseBI | CCWGG | 2 cut(s) | 357, 832 |
| BseCI | ATCGAT | 1 cut(s) | 195 |
| BseDI | CCNNGG | 6 cut(s) | 441, 747, 830, 831, 1235, 1842 |
| BseGI | GGATG | 5 cut(s) | 737, 1480, 1663, 1713, 1806 |
| BseJI | GATNNNNATC | 1 cut(s) | 1107 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 747, 832 |
| BseMI | GCAATG | 2 cut(s) | 2064, 2132 |
| BseMII | CTCAG | 4 cut(s) | 393, 467, 790, 1917 |
| BseNI | ACTGG | 4 cut(s) | 475, 918, 1522, 1555 |
| BseRI | GAGGAG | 2 cut(s) | 1181, 1581 |
| BseSI | GKGCMC | 2 cut(s) | 397, 943 |
| BseXI | GCAGC | 7 cut(s) | 146, 168, 232, 555, 681, 1786, 1895 |
| BsgI | GTGCAG | 1 cut(s) | 2032 |
| BshFI | GGCC | 1 cut(s) | 2111 |
| BshNI | GGYRCC | 2 cut(s) | 392, 940 |
| BshVI | ATCGAT | 1 cut(s) | 195 |
| BsiSI | CCGG | 2 cut(s) | 747, 1463 |
| BslFI | GGGAC | 4 cut(s) | 538, 813, 1649, 1823 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 747, 832 |
| BsmAI | GTCTC | 6 cut(s) | 411, 656, 1461, 1512, 2066, 2083 |
| BsmBI | CGTCTC | 2 cut(s) | 1461, 2083 |
| BsmFI | GGGAC | 4 cut(s) | 538, 813, 1649, 1823 |
| BsnI | GGCC | 1 cut(s) | 2111 |
| Bso31I | GGTCTC | 3 cut(s) | 656, 1512, 2066 |
| Bsp1286I | GDGCHC | 2 cut(s) | 397, 943 |
| BspACI | CCGC | 1 cut(s) | 320 |
| BspANI | GGCC | 1 cut(s) | 2111 |
| BspCNI | CTCAG | 4 cut(s) | 394, 466, 789, 1918 |
| BspDI | ATCGAT | 1 cut(s) | 195 |
| BspHI | TCATGA | 1 cut(s) | 1111 |
| BspLI | GGNNCC | 3 cut(s) | 354, 394, 942 |
| BspMI | ACCTGC | 1 cut(s) | 961 |
| BspOI | GCTAGC | 1 cut(s) | 1982 |
| BspPI | GGATC | 2 cut(s) | 499, 1116 |
| BspT107I | GGYRCC | 2 cut(s) | 392, 940 |
| BspTNI | GGTCTC | 3 cut(s) | 656, 1512, 2066 |
| BsrDI | GCAATG | 2 cut(s) | 2064, 2132 |
| BsrI | ACTGG | 4 cut(s) | 475, 918, 1522, 1555 |
| BssECI | CCNNGG | 6 cut(s) | 441, 747, 830, 831, 1235, 1842 |
| BssSI | CACGAG | 1 cut(s) | 1995 |
| BssT1I | CCWWGG | 3 cut(s) | 441, 1235, 1842 |
| Bst2BI | CACGAG | 1 cut(s) | 1995 |
| Bst2UI | CCWGG | 2 cut(s) | 357, 832 |
| Bst4CI | ACNGT | 5 cut(s) | 58, 251, 931, 1098, 2053 |
| Bst6I | CTCTTC | 2 cut(s) | 748, 1656 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1853 |
| BstC8I | GCNNGC | 6 cut(s) | 218, 624, 1346, 1804, 1980, 2071 |
| BstDEI | CTNAG | 6 cut(s) | 402, 453, 573, 776, 1295, 1926 |
| BstF5I | GGATG | 5 cut(s) | 737, 1480, 1663, 1713, 1806 |
| BstMAI | GTCTC | 6 cut(s) | 411, 656, 1461, 1512, 2066, 2083 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 1757, 1853, 1862, 1871, 1880 |
| BstNI | CCWGG | 2 cut(s) | 357, 832 |
| BstNSI | RCATGY | 5 cut(s) | 266, 899, 911, 1304, 1348 |
| BstSCI | CCNGG | 4 cut(s) | 355, 746, 830, 1462 |
| BstSLI | GKGCMC | 2 cut(s) | 397, 943 |
| BstV1I | GCAGC | 7 cut(s) | 146, 168, 232, 555, 681, 1786, 1895 |
| BstV2I | GAAGAC | 4 cut(s) | 99, 970, 1065, 1258 |
| BstX2I | RGATCY | 1 cut(s) | 819 |
| BstYI | RGATCY | 1 cut(s) | 819 |
| Bsu15I | ATCGAT | 1 cut(s) | 195 |
| BsuRI | GGCC | 1 cut(s) | 2111 |
| BsuTUI | ATCGAT | 1 cut(s) | 195 |
| BtgZI | GCGATG | 1 cut(s) | 742 |
| BtrI | CACGTC | 1 cut(s) | 1471 |
| BtsCI | GGATG | 5 cut(s) | 737, 1480, 1663, 1713, 1806 |
| BtsI | GCAGTG | 1 cut(s) | 1678 |
| BveI | ACCTGC | 1 cut(s) | 961 |
| Cac8I | GCNNGC | 6 cut(s) | 218, 624, 1346, 1804, 1980, 2071 |
| CciI | TCATGA | 1 cut(s) | 1111 |
| Cfr13I | GGNCC | 1 cut(s) | 353 |
| ClaI | ATCGAT | 1 cut(s) | 195 |
| Csp6I | GTAC | 6 cut(s) | 99, 289, 701, 805, 1292, 1666 |
| CviQI | GTAC | 6 cut(s) | 99, 289, 701, 805, 1292, 1666 |
| DdeI | CTNAG | 6 cut(s) | 402, 453, 573, 776, 1295, 1926 |
| Eam1104I | CTCTTC | 2 cut(s) | 748, 1656 |
| EarI | CTCTTC | 2 cut(s) | 748, 1656 |
| Eco130I | CCWWGG | 3 cut(s) | 441, 1235, 1842 |
| Eco31I | GGTCTC | 3 cut(s) | 656, 1512, 2066 |
| Eco32I | GATATC | 2 cut(s) | 1444, 1618 |
| Eco47I | GGWCC | 1 cut(s) | 353 |
| Eco57I | CTGAAG | 3 cut(s) | 1035, 1854, 2043 |
| EcoO109I | RGGNCCY | 1 cut(s) | 353 |
| EcoRI | GAATTC | 1 cut(s) | 1136 |
| EcoRII | CCWGG | 2 cut(s) | 355, 830 |
| EcoRV | GATATC | 2 cut(s) | 1444, 1618 |
| EcoT14I | CCWWGG | 3 cut(s) | 441, 1235, 1842 |
| EcoT22I | ATGCAT | 1 cut(s) | 142 |
| ErhI | CCWWGG | 3 cut(s) | 441, 1235, 1842 |
| Esp3I | CGTCTC | 2 cut(s) | 1461, 2083 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1014, 1046, 1795, 1827 |
| FaqI | GGGAC | 4 cut(s) | 538, 813, 1649, 1823 |
| FbaI | TGATCA | 1 cut(s) | 1527 |
| FblI | GTMKAC | 2 cut(s) | 981, 1686 |
| Fnu4HI | GCNGC | 8 cut(s) | 157, 160, 221, 321, 544, 670, 1800, 1884 |
| FokI | GGATG | 5 cut(s) | 724, 1487, 1670, 1720, 1793 |
| Fsp4HI | GCNGC | 8 cut(s) | 157, 160, 221, 321, 544, 670, 1800, 1884 |
| FspBI | CTAG | 4 cut(s) | 372, 1733, 1835, 1979 |
| GluI | GCNGC | 8 cut(s) | 157, 160, 221, 321, 544, 670, 1800, 1884 |
| GsuI | CTGGAG | 2 cut(s) | 345, 492 |
| HaeIII | GGCC | 1 cut(s) | 2111 |
| HapII | CCGG | 2 cut(s) | 747, 1463 |
| HincII | GTYRAC | 1 cut(s) | 1687 |
| HindII | GTYRAC | 1 cut(s) | 1687 |
| HindIII | AAGCTT | 1 cut(s) | 2071 |
| HpaII | CCGG | 2 cut(s) | 747, 1463 |
| HphI | GGTGA | 3 cut(s) | 317, 341, 1004 |
| Hpy166II | GTNNAC | 3 cut(s) | 332, 982, 1687 |
| Hpy8I | GTNNAC | 3 cut(s) | 332, 982, 1687 |
| HpyAV | CCTTC | 4 cut(s) | 407, 1362, 1821, 2126 |
| HpyCH4III | ACNGT | 5 cut(s) | 58, 251, 931, 1098, 2053 |
| HpyCH4IV | ACGT | 2 cut(s) | 1261, 1470 |
| HpyCH4V | TGCA | 9 cut(s) | 23, 140, 626, 718, 911, 1183, 1802, 2049, 2069 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 1757, 1853, 1862, 1871, 1880 |
| HpyF3I | CTNAG | 6 cut(s) | 402, 453, 573, 776, 1295, 1926 |
| HpySE526I | ACGT | 2 cut(s) | 1261, 1470 |
| Ksp22I | TGATCA | 1 cut(s) | 1527 |
| LmnI | GCTCC | 4 cut(s) | 167, 248, 1594, 1679 |
| Lsp1109I | GCAGC | 7 cut(s) | 146, 168, 232, 555, 681, 1786, 1895 |
| LweI | GCATC | 3 cut(s) | 635, 765, 1815 |
| MaeI | CTAG | 4 cut(s) | 372, 1733, 1835, 1979 |
| MaeII | ACGT | 2 cut(s) | 1261, 1470 |
| MaeIII | GTNAC | 4 cut(s) | 992, 1330, 1546, 1596 |
| MfeI | CAATTG | 1 cut(s) | 113 |
| MflI | RGATCY | 1 cut(s) | 819 |
| MhlI | GDGCHC | 2 cut(s) | 397, 943 |
| MlyI | GAGTC | 6 cut(s) | 78, 215, 317, 413, 596, 930 |
| MmeI | TCCRAC | 3 cut(s) | 270, 1188, 1602 |
| Mph1103I | ATGCAT | 1 cut(s) | 142 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1029 |
| MseI | TTAA | 6 cut(s) | 435, 509, 1125, 1280, 1556, 1878 |
| MslI | CAYNNNNRTG | 2 cut(s) | 719, 2054 |
| MspA1I | CMGCKG | 2 cut(s) | 159, 1799 |
| MspI | CCGG | 2 cut(s) | 747, 1463 |
| MspR9I | CCNGG | 4 cut(s) | 357, 748, 832, 1464 |
| MunI | CAATTG | 1 cut(s) | 113 |
| MvaI | CCWGG | 2 cut(s) | 357, 832 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 1757, 1853, 1862, 1871, 1880 |
| NciI | CCSGG | 2 cut(s) | 748, 1464 |
| NheI | GCTAGC | 1 cut(s) | 1978 |
| NlaIV | GGNNCC | 3 cut(s) | 354, 394, 942 |
| NmuCI | GTSAC | 3 cut(s) | 992, 1330, 1596 |
| NsiI | ATGCAT | 1 cut(s) | 142 |
| NspI | RCATGY | 5 cut(s) | 266, 899, 911, 1304, 1348 |
| PaeI | GCATGC | 1 cut(s) | 1348 |
| PagI | TCATGA | 1 cut(s) | 1111 |
| PasI | CCCWGGG | 1 cut(s) | 831 |
| PciI | ACATGT | 2 cut(s) | 895, 1300 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1029 |
| PfeI | GAWTC | 5 cut(s) | 197, 593, 1459, 1478, 1604 |
| PfoI | TCCNGGA | 1 cut(s) | 1462 |
| PkrI | GCNGC | 8 cut(s) | 158, 161, 222, 322, 545, 671, 1801, 1885 |
| PleI | GAGTC | 6 cut(s) | 78, 214, 316, 412, 595, 929 |
| PpsI | GAGTC | 6 cut(s) | 78, 214, 316, 412, 595, 929 |
| PpuMI | RGGWCCY | 1 cut(s) | 353 |
| PscI | ACATGT | 2 cut(s) | 895, 1300 |
| PshBI | ATTAAT | 1 cut(s) | 1125 |
| Psp5II | RGGWCCY | 1 cut(s) | 353 |
| Psp6I | CCWGG | 2 cut(s) | 355, 830 |
| PspGI | CCWGG | 2 cut(s) | 355, 830 |
| PspN4I | GGNNCC | 3 cut(s) | 354, 394, 942 |
| PspPI | GGNCC | 1 cut(s) | 353 |
| PspPPI | RGGWCCY | 1 cut(s) | 353 |
| PsuI | RGATCY | 1 cut(s) | 819 |
| PvuII | CAGCTG | 2 cut(s) | 159, 1799 |
| RsaI | GTAC | 6 cut(s) | 100, 290, 702, 806, 1293, 1667 |
| RsaNI | GTAC | 6 cut(s) | 99, 289, 701, 805, 1292, 1666 |
| RseI | CAYNNNNRTG | 2 cut(s) | 719, 2054 |
| SalI | GTCGAC | 1 cut(s) | 1685 |
| SaqAI | TTAA | 6 cut(s) | 435, 509, 1125, 1280, 1556, 1878 |
| SatI | GCNGC | 8 cut(s) | 157, 160, 221, 321, 544, 670, 1800, 1884 |
| Sau96I | GGNCC | 1 cut(s) | 353 |
| ScaI | AGTACT | 3 cut(s) | 100, 290, 1293 |
| SchI | GAGTC | 6 cut(s) | 78, 215, 317, 413, 596, 930 |
| ScrFI | CCNGG | 4 cut(s) | 357, 748, 832, 1464 |
| SduI | GDGCHC | 2 cut(s) | 397, 943 |
| SfaNI | GCATC | 3 cut(s) | 635, 765, 1815 |
| SinI | GGWCC | 1 cut(s) | 353 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 719, 2054 |
| SphI | GCATGC | 1 cut(s) | 1348 |
| SsiI | CCGC | 1 cut(s) | 320 |
| SspMI | CTAG | 4 cut(s) | 372, 1733, 1835, 1979 |
| StyD4I | CCNGG | 4 cut(s) | 355, 746, 830, 1462 |
| StyI | CCWWGG | 3 cut(s) | 441, 1235, 1842 |
| TaaI | ACNGT | 5 cut(s) | 58, 251, 931, 1098, 2053 |
| TaiI | ACGT | 2 cut(s) | 1264, 1473 |
| TaqI | TCGA | 3 cut(s) | 195, 1392, 1686 |
| TatI | WGTACW | 5 cut(s) | 98, 288, 804, 1291, 1665 |
| TauI | GCSGC | 1 cut(s) | 323 |
| TfiI | GAWTC | 5 cut(s) | 197, 593, 1459, 1478, 1604 |
| Tru1I | TTAA | 6 cut(s) | 435, 509, 1125, 1280, 1556, 1878 |
| Tru9I | TTAA | 6 cut(s) | 435, 509, 1125, 1280, 1556, 1878 |
| TseFI | GTSAC | 3 cut(s) | 992, 1330, 1596 |
| TseI | GCWGC | 7 cut(s) | 156, 159, 220, 543, 669, 1799, 1883 |
| Tsp45I | GTSAC | 3 cut(s) | 992, 1330, 1596 |
| TspGWI | ACGGA | 4 cut(s) | 668, 815, 1070, 1584 |
| VpaK11BI | GGWCC | 1 cut(s) | 353 |
| VspI | ATTAAT | 1 cut(s) | 1125 |
| XapI | RAATTY | 5 cut(s) | 854, 1043, 1136, 1276, 1541 |
| XceI | RCATGY | 5 cut(s) | 266, 899, 911, 1304, 1348 |
| XmiI | GTMKAC | 2 cut(s) | 981, 1686 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1029 |
| XspI | CTAG | 4 cut(s) | 372, 1733, 1835, 1979 |
| ZrmI | AGTACT | 3 cut(s) | 100, 290, 1293 |
| Zsp2I | ATGCAT | 1 cut(s) | 142 |