Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0011122

Physical Location & Seq

Genomic Coordinates Forward (+)

15246578 .. 15250931

Gene Structure 4354 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g22240.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2739 bp

ATGAGCTTCGCCGGACCCAGAATCTCAAAACCCACAAAACCCCCAAACTCCACGACCCCACCACCACCGCAACACCACCTCAGGTCCTCCTCTTCTTCTCTCTCCTCCCACCTCGCCATGGTCGAACTCAAACAGCGCATCCTCACCTCCCTCTCCAAGCTCTCCGACCGCGACACCTACCAAATCGCCGTCGAAGATCTCGAGAAAATCATCCAGACCCTCGCCGCCGACGGCCTCCCCATGCTCCTCAACTGCCTCTACGACGCCTCCGCCGACCCAAAACCCGCCGTGAAAAAGGAGTCCCTCCGCCTCCTCGCATTGGCCTCCGCGTCCCATCCCGACTTCGCCTCCACCCACCTCACCAAGATCATCTCCCATATCGTCAAACGCCTCAAGGACGCCGACTCCGGCGTCAGGGACGCGTGTCGCGACGCCATTGGGGCCCTGGCGGCGCAGTACCTGAAGGGCGAGGGAGGCGCCGAGAATGTCGGGTCGGTGGTGGGGTTGTTTGTGAAGCCGTTGTTTGAGGCTATGGGGGAGCAGAACAAAGGGGTGCAATCCGGTGCGGCGCTGTGTATGGCTAAGGTAGTGGACTCGGCTTCGGAACCTCCTCCTGTCTCTGCTTTCCAGAAGCTCTGTCCCAGGATCTGTAAGCTGCTTAACAATCCTAACTTCCTCGCCAAGTCTTCACTTCTGCCGGTGGTTTCGAGCTTGTCCCAGGTTGGAGCGGTAGCACCGCAAAGCTTGGATAATTTGCTGCCGAGTATTCATGACTGTCTTGGAAGTCCGGATTGGGCAACACGTAAAGCAGCAGCTGATGTGCTCATTTCACTAGCATTGCATTCGAGCAATCTGGTCACGGATCGGGCTGCTCCCACGGTGACTGTGCTGGAGTCTTGCCGGTTTGACAAGATAAAACCCGTCAGAGATAGCATGACTGAAGCATTGCAGTTTTGGAAAAAGATCGCTGGGGGAGATGACTCTCCGAAAGAGCAGAAAAGCCCATCTCAAGCTGAGGTATCAGAAAGGAATGAGCCAAAAGTTTCAAAGTCTAGTGAGAAAACAGAACAAGCAACAAAGGTTTCACCTAATGGTTCTTCCCCTACTTCAGATTCTGTTTCTAAAGCCAAAGATGGTAGTATTCCAGATAAAGCTGTTGCACTTCTGAAAAAGAAACCGCCTGTGTTGACTGACAAAGAGCTCAACCCAGAATTCTTCCAGAAACTTGAAAGGGGTACTGGTGAGTTGGCTGTAGAGGTGGTTGTTCCTCGTAGACATCTCAATACTTCAAACTCAACCAATGAGGTAGAACCAGAGTCTATGGACTCAAAGGAAAGGTCAAACAACATTGGAAACAGCCATTCAGAAGAGTTTCGTGGATCTTTCAATAGTAAATACCGTAACATTGAGAGAGGAATTGCTAGTGTGTATTCTAAACAACGAGATAATGAATGGGCAGAAGAAAGAATGAACGGAAAAGACACTAGAATAAGAGCAGTGGATGTTGATGATAGAAGTGATATAAATCAAAGGGAGTCATCCAGCAGTCGTGCAGGGTTCTCTAAAACTGATGGTCAATCTGACGGATCCTTTGCCAGTAACAAAGGAAATTGGATGGCTATCCAAAGGCAGTTGTTACAGCTGGAGAGACAACAAGCTCATTTGATGAGCATGCTGCAGGATTTCATGGGCGGGTCTCATGACACCATGATAACTTTGGAGAATAGGGTAAGGGGCCTTGAGAGAATTGTGGAAGACATGGCACGAGATTTATCAATATCATCAGGTAGGAGAGGTGGTAATTTTCCGATGGGGTTTGAGGGATCTAATCGACAACTAGGAAAGTATAATGGTTTCCCTGATTATGCAAGTGGCAAATTTGGAAGAGGTGGTGATGGACGAATTCCGTTTGGGGAGCGATTTTCCCAAACTGAAGGAATTGTTTCTGAGATGAGGGGAAGGGGCCCTTCTTGGAGATCTGACATGTCTGAGGTGTGGGATTATTCTACATATGGTAGTTCCAGAAATGGGCAGAGGAAGGCTATGGATGGTAGGTCACCCAAGTCAGAAAATGGAAGTGATCATGGTGGCAGCAGGCGGGCATGGGAGAAAGGGAGTGGACCTCTTAGGTTTGGTGAGGGGCCTTCTGCAAGAAGTGTTTGGCAAGCATCAAAAGATGAAGCTACCTTGGAAGCTATTCGTGTTGCTGGAGAGGATAATGTACCATCAAGAACAGCAAGAGTAGCTATCCCTGAATTGACTGCAGAGGCTATGGGAGATGATACTATTGGCCAAGATCGGGATCCAATCTGGACATCTTGGACTAATGCAATGGATGCTCTTCAAGTGGGTGATATGGATACAGCCTACGCTGAAGTATTGTCTACAGGAGACGATCCGTTGCTTGTAAAACTAATGGATAGATCAGGTCCTGTGATTGACCAACTTTCAAATGAGACAGCAACTGAGGTTTTGCATGCGGTTGGACAGTTTTTACCAGATCAAAACTTGTTTGACGTCTGCCTGTCTTGGATTCAGCAGTTGGTTGAAATAGAGATGGAAAATGGACCTGATGTCCTCGGCATCCCAACGGAAGTAAGGAAGGAGATAGTACTGAATTTGCATGAAGCTTCTGTAGCAATGGATCCACCTGAGGACTGGGAGGGTGCAATGCCTGATCAACTTTTGCTGCAGTTGGCATCCACCTGGGGAATCAATTTGCAACAACATGCCAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005856 GO:0005874 GO:0005881 GO:0005938 GO:0007275 GO:0008017 GO:0008092 GO:0008150 GO:0009653 GO:0009826 GO:0009987 GO:0010005 GO:0010031 GO:0015630 GO:0015631 GO:0016043 GO:0016049 GO:0030863 GO:0030981 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044464 GO:0048589 GO:0048856 GO:0048869 GO:0050879 GO:0055028 GO:0060560 GO:0071840 GO:0071944 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0099568

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

913

Amino Acids

99.43

Weight (kDa)

5.65

Isoelectric Point (pI)

40.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TOR1L1_N	PF24714	41 - 321	4.2e-121	TORTIFOLIA1 N-terminal
TOR1L1_C	PF24713	770 - 903	9.4e-66	TORTIFOLIA1 C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011122)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G27060
fragaria_vesca	FvH4_3g22240
malus_domestica	MD03G1206600.v1.1 MD11G1222000.v1.1
prunus_persica	Prupe.4G209400_v2.0.a1 Prupe.4G209400_v2.0.a1
pyrus_communis	pycom03g15640 pycom11g19580
rosa_chinensis	RchiOBHm_Chr5g0038291
rosa_laevigata	RLG00000033844
rosa_multiflora	Rmu_sc0000764.1_g000003 Rmu_sc0003858.1_g000004 Rmu_sc0035524.1_g000001
rosa_roxburghii	Rroxscaffold_1G00042730
rosa_rugosa	Rorug05G0171800
rosa_samantha	Rh5AG259100 Rh5BG262900 Rh5CG295300 Rh5DG271900
rosa_wichuraiana	Rw5G024250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	410
AatII	GACGTC	1 cut(s)	2520
AccB1I	GGYRCC	1 cut(s)	476
AccBSI	CCGCTC	1 cut(s)	728
AccI	GTMKAC	2 cut(s)	1273, 2384
AccII	CGCG	4 cut(s)	171, 329, 422, 429
AccIII	TCCGGA	1 cut(s)	787
AcoI	YGGCCR	1 cut(s)	2290
AcsI	RAATTY	4 cut(s)	1211, 1877, 1902, 2617
AcuI	CTGAAG	5 cut(s)	482, 960, 1092, 1953, 2394
AcyI	GRCGYC	6 cut(s)	264, 399, 411, 432, 477, 2517
AfaI	GTAC	4 cut(s)	458, 1237, 2223, 2613
AfiI	CCNNNNNNNGG	5 cut(s)	118, 319, 414, 2028, 2299
AflIII	ACRYGT	3 cut(s)	420, 800, 1983
AgsI	TTSAA	7 cut(s)	1047, 1229, 1290, 1387, 2345, 2451, 2549
AhdI	GACNNNNNGTC	1 cut(s)	2573
AjnI	CCWGG	4 cut(s)	444, 641, 717, 2705
AjuI	GAANNNNNNNTTGG	2 cut(s)	775, 807
Alw21I	GWGCWC	2 cut(s)	825, 1203
Alw26I	GTCTC	5 cut(s)	622, 1642, 1701, 2385, 2450
AlwNI	CAGNNNCTG	6 cut(s)	460, 648, 815, 1115, 2432, 2465
Ama87I	CYCGRG	1 cut(s)	200
Aor13HI	TCCGGA	1 cut(s)	787
AoxI	GGCC	7 cut(s)	232, 321, 441, 1735, 1963, 2141, 2290
ApaI	GGGCCC	2 cut(s)	445, 1967
ApeKI	GCWGC	8 cut(s)	655, 757, 809, 812, 869, 1675, 2091, 2689
ApoI	RAATTY	4 cut(s)	1211, 1877, 1902, 2617
ArsI	GACNNNNNNTTYG	4 cut(s)	1322, 1354, 1574, 1606
Asp700I	GAANNNNTTC	3 cut(s)	1371, 1942, 2196
AspLEI	GCGC	4 cut(s)	138, 454, 479, 571
AsuHPI	GGTGA	9 cut(s)	136, 352, 892, 1077, 1253, 1904, 2049, 2147, 2363
AvaI	CYCGRG	1 cut(s)	200
AvaII	GGWCC	5 cut(s)	14, 84, 2120, 2429, 2567
AxyI	CCTNAGG	2 cut(s)	80, 2652
BaeGI	GKGCMC	2 cut(s)	445, 1967
BalI	TGGCCA	1 cut(s)	2292
BamHI	GGATCC	3 cut(s)	1586, 2302, 2644
BanI	GGYRCC	1 cut(s)	476
BanII	GRGCYC	3 cut(s)	445, 1203, 1967
BauI	CACGAG	1 cut(s)	1764
BbsI	GAAGAC	2 cut(s)	678, 1761
Bbv12I	GWGCWC	2 cut(s)	825, 1203
BbvCI	CCTCAGC	1 cut(s)	1014
BbvI	GCAGC	8 cut(s)	642, 744, 821, 824, 856, 1662, 2103, 2676
BceAI	ACGGC	4 cut(s)	173, 247, 272, 502
BcgI	CGANNNNNNTGC	2 cut(s)	825, 859
BciT130I	CCWGG	4 cut(s)	446, 643, 719, 2707
BciVI	GTATCC	1 cut(s)	2353
BclI	TGATCA	2 cut(s)	2080, 2677
BcoDI	GTCTC	5 cut(s)	622, 1642, 1701, 2385, 2450
BfaI	CTAG	5 cut(s)	833, 1053, 1422, 1485, 1838
BfmI	CTRYAG	6 cut(s)	1251, 1676, 2262, 2385, 2634, 2690
BfoI	RGCGCY	2 cut(s)	480, 572
BfuI	GTATCC	1 cut(s)	2353
BglI	GCCNNNNNGGC	2 cut(s)	440, 449
BglII	AGATCT	2 cut(s)	196, 1976
BmcAI	AGTACT	1 cut(s)	2613
Bme1390I	CCNGG	4 cut(s)	446, 643, 719, 2707
Bme18I	GGWCC	5 cut(s)	14, 84, 2120, 2429, 2567
BmeRI	GACNNNNNGTC	1 cut(s)	2573
BmeT110I	CYCGRG	1 cut(s)	200
BmrFI	CCNGG	4 cut(s)	446, 643, 719, 2707
BmrI	ACTGGG	1 cut(s)	2668
BmsI	GCATC	5 cut(s)	147, 2177, 2326, 2592, 2708
BmuI	ACTGGG	1 cut(s)	2668
BoxI	GACNNNNGTC	1 cut(s)	423
BpiI	GAAGAC	2 cut(s)	678, 1761
BplI	GAGNNNNNCTC	2 cut(s)	2107, 2139
BpmI	CTGGAG	3 cut(s)	911, 1664, 2229
Bpu10I	CCTNAGC	2 cut(s)	582, 1014
BpuEI	CTTGAG	3 cut(s)	377, 993, 1760
BsaAI	YACGTR	1 cut(s)	803
BsaBI	GATNNNNATC	3 cut(s)	1524, 1619, 2301
BsaHI	GRCGYC	6 cut(s)	264, 399, 411, 432, 477, 2517
BsaI	GGTCTC	1 cut(s)	1701
BsaJI	CCNNGG	8 cut(s)	117, 444, 641, 717, 876, 2187, 2578, 2706
BsaWI	WCCGGW	2 cut(s)	560, 787
BsaXI	ACNNNNNCTCC	8 cut(s)	251, 281, 332, 362, 389, 419, 1783, 1813
Bsc4I	CCNNNNNNNGG	5 cut(s)	118, 319, 414, 2028, 2299
Bse118I	RCCGGY	2 cut(s)	697, 900
Bse1I	ACTGG	3 cut(s)	1243, 1596, 2663
Bse21I	CCTNAGG	2 cut(s)	80, 2652
Bse3DI	GCAATG	5 cut(s)	836, 944, 2337, 2646, 2676
Bse8I	GATNNNNATC	3 cut(s)	1524, 1619, 2301
BseAI	TCCGGA	1 cut(s)	787
BseBI	CCWGG	4 cut(s)	446, 643, 719, 2707
BseDI	CCNNGG	8 cut(s)	117, 444, 641, 717, 876, 2187, 2578, 2706
BseJI	GATNNNNATC	3 cut(s)	1524, 1619, 2301
BseLI	CCNNNNNNNGG	5 cut(s)	118, 319, 414, 2028, 2299
BseMI	GCAATG	5 cut(s)	836, 944, 2337, 2646, 2676
BseMII	CTCAG	6 cut(s)	94, 1005, 1938, 1980, 2457, 2643
BseNI	ACTGG	3 cut(s)	1243, 1596, 2663
BseRI	GAGGAG	5 cut(s)	79, 94, 236, 302, 600
BseSI	GKGCMC	2 cut(s)	445, 1967
BseXI	GCAGC	8 cut(s)	642, 744, 821, 824, 856, 1662, 2103, 2676
BseYI	CCCAGC	1 cut(s)	968
BsgI	GTGCAG	1 cut(s)	1572
Bsh1236I	CGCG	4 cut(s)	171, 329, 422, 429
Bsh1285I	CGRYCG	1 cut(s)	169
BshFI	GGCC	7 cut(s)	234, 323, 443, 1737, 1965, 2143, 2292
BshNI	GGYRCC	1 cut(s)	476
BsiEI	CGRYCG	1 cut(s)	169
BsiHKAI	GWGCWC	2 cut(s)	825, 1203
BsiHKCI	CYCGRG	1 cut(s)	200
BsiSI	CCGG	6 cut(s)	12, 408, 561, 698, 788, 901
BslFI	GGGAC	5 cut(s)	286, 316, 431, 624, 700
BslI	CCNNNNNNNGG	5 cut(s)	118, 319, 414, 2028, 2299
BsmAI	GTCTC	5 cut(s)	622, 1642, 1701, 2385, 2450
BsmBI	CGTCTC	1 cut(s)	2385
BsmFI	GGGAC	5 cut(s)	286, 316, 431, 624, 700
BsmI	GAATGC	1 cut(s)	841
BsnI	GGCC	7 cut(s)	234, 323, 443, 1737, 1965, 2143, 2292
Bso31I	GGTCTC	1 cut(s)	1701
BsoBI	CYCGRG	1 cut(s)	200
Bsp120I	GGGCCC	2 cut(s)	441, 1963
Bsp1286I	GDGCHC	4 cut(s)	445, 825, 1203, 1967
Bsp13I	TCCGGA	1 cut(s)	787
Bsp19I	CCATGG	1 cut(s)	117
Bsp68I	TCGCGA	1 cut(s)	429
BspANI	GGCC	7 cut(s)	234, 323, 443, 1737, 1965, 2143, 2292
BspCNI	CTCAG	6 cut(s)	93, 1006, 1939, 1981, 2458, 2644
BspEI	TCCGGA	1 cut(s)	787
BspFNI	CGCG	4 cut(s)	171, 329, 422, 429
BspHI	TCATGA	2 cut(s)	769, 1699
BspMAI	CTGCAG	3 cut(s)	1680, 2266, 2694
BspQI	GCTCTTC	1 cut(s)	2346
BspT107I	GGYRCC	1 cut(s)	476
BspTNI	GGTCTC	1 cut(s)	1701
BsrBI	CCGCTC	1 cut(s)	728
BsrDI	GCAATG	5 cut(s)	836, 944, 2337, 2646, 2676
BsrFI	RCCGGY	2 cut(s)	697, 900
BsrI	ACTGG	3 cut(s)	1243, 1596, 2663
BssAI	RCCGGY	2 cut(s)	697, 900
BssECI	CCNNGG	8 cut(s)	117, 444, 641, 717, 876, 2187, 2578, 2706
BssNI	GRCGYC	6 cut(s)	264, 399, 411, 432, 477, 2517
BssSI	CACGAG	1 cut(s)	1764
BssT1I	CCWWGG	2 cut(s)	117, 2187
Bst2BI	CACGAG	1 cut(s)	1764
Bst2UI	CCWGG	4 cut(s)	446, 643, 719, 2707
Bst4CI	ACNGT	5 cut(s)	776, 880, 886, 1400, 2490
Bst6I	CTCTTC	4 cut(s)	97, 1362, 1879, 2346
BstACI	GRCGYC	6 cut(s)	264, 399, 411, 432, 477, 2517
BstAPI	GCANNNNNTGC	1 cut(s)	2336
BstBAI	YACGTR	1 cut(s)	803
BstC8I	GCNNGC	5 cut(s)	1673, 2096, 2100, 2166, 2478
BstDEI	CTNAG	8 cut(s)	80, 582, 1014, 1947, 1989, 2126, 2466, 2652
BstDSI	CCRYGG	2 cut(s)	117, 876
BstEII	GGTNACC	1 cut(s)	2055
BstFNI	CGCG	4 cut(s)	171, 329, 422, 429
BstH2I	RGCGCY	2 cut(s)	480, 572
BstHHI	GCGC	4 cut(s)	138, 454, 479, 571
BstMAI	GTCTC	5 cut(s)	622, 1642, 1701, 2385, 2450
BstMCI	CGRYCG	1 cut(s)	169
BstMWI	GCNNNNNNNGC	6 cut(s)	440, 449, 474, 2243, 2336, 2636
BstNI	CCWGG	4 cut(s)	446, 643, 719, 2707
BstNSI	RCATGY	4 cut(s)	1675, 1987, 2480, 2732
BstPAI	GACNNNNGTC	1 cut(s)	423
BstPI	GGTNACC	1 cut(s)	2055
BstSCI	CCNGG	4 cut(s)	444, 641, 717, 2705
BstSFI	CTRYAG	6 cut(s)	1251, 1676, 2262, 2385, 2634, 2690
BstSLI	GKGCMC	2 cut(s)	445, 1967
BstUI	CGCG	4 cut(s)	171, 329, 422, 429
BstV1I	GCAGC	8 cut(s)	642, 744, 821, 824, 856, 1662, 2103, 2676
BstV2I	GAAGAC	2 cut(s)	678, 1761
BstX2I	RGATCY	8 cut(s)	196, 645, 1379, 1586, 1823, 1976, 2302, 2644
BstYI	RGATCY	8 cut(s)	196, 645, 1379, 1586, 1823, 1976, 2302, 2644
Bsu36I	CCTNAGG	2 cut(s)	80, 2652
BsuI	GTATCC	1 cut(s)	2353
BsuRI	GGCC	7 cut(s)	234, 323, 443, 1737, 1965, 2143, 2292
BtgI	CCRYGG	2 cut(s)	117, 876
BtsI	GCAGTG	1 cut(s)	1503
BtsIMutI	CAGTG	1 cut(s)	1503
BtuMI	TCGCGA	1 cut(s)	429
Cac8I	GCNNGC	5 cut(s)	1673, 2096, 2100, 2166, 2478
CaiI	CAGNNNCTG	6 cut(s)	460, 648, 815, 1115, 2432, 2465
CciI	TCATGA	2 cut(s)	769, 1699
CfoI	GCGC	4 cut(s)	138, 454, 479, 571
Cfr10I	RCCGGY	2 cut(s)	697, 900
CseI	GACGC	6 cut(s)	272, 318, 400, 407, 428, 440
Csp6I	GTAC	4 cut(s)	457, 1236, 2222, 2612
CviQI	GTAC	4 cut(s)	457, 1236, 2222, 2612
DdeI	CTNAG	8 cut(s)	80, 582, 1014, 1947, 1989, 2126, 2466, 2652
DinI	GGCGCC	1 cut(s)	478
DrdI	GACNNNNNNGTC	1 cut(s)	410
DriI	GACNNNNNGTC	1 cut(s)	2573
DseDI	GACNNNNNNGTC	1 cut(s)	410
EaeI	YGGCCR	1 cut(s)	2290
Eam1104I	CTCTTC	4 cut(s)	97, 1362, 1879, 2346
Eam1105I	GACNNNNNGTC	1 cut(s)	2573
EarI	CTCTTC	4 cut(s)	97, 1362, 1879, 2346
EciI	GGCGGA	2 cut(s)	259, 296
Ecl136II	GAGCTC	1 cut(s)	1201
Eco130I	CCWWGG	2 cut(s)	117, 2187
Eco24I	GRGCYC	3 cut(s)	445, 1203, 1967
Eco31I	GGTCTC	1 cut(s)	1701
Eco47I	GGWCC	5 cut(s)	14, 84, 2120, 2429, 2567
Eco53kI	GAGCTC	1 cut(s)	1201
Eco57I	CTGAAG	5 cut(s)	482, 960, 1092, 1953, 2394
Eco81I	CCTNAGG	2 cut(s)	80, 2652
Eco88I	CYCGRG	1 cut(s)	200
Eco91I	GGTNACC	1 cut(s)	2055
EcoICRI	GAGCTC	1 cut(s)	1201
EcoO109I	RGGNCCY	8 cut(s)	84, 441, 442, 1735, 1963, 1964, 2141, 2429
EcoO65I	GGTNACC	1 cut(s)	2055
EcoRI	GAATTC	2 cut(s)	1211, 1902
EcoRII	CCWGG	4 cut(s)	444, 641, 717, 2705
EcoT14I	CCWWGG	2 cut(s)	117, 2187
EcoT38I	GRGCYC	3 cut(s)	445, 1203, 1967
EgeI	GGCGCC	1 cut(s)	478
EheI	GGCGCC	1 cut(s)	478
ErhI	CCWWGG	2 cut(s)	117, 2187
Esp3I	CGTCTC	1 cut(s)	2385
FalI	AAGNNNNNCTT	2 cut(s)	1951, 1983
FaqI	GGGAC	5 cut(s)	286, 316, 431, 624, 700
FauI	CCCGC	3 cut(s)	292, 1685, 2091
FauNDI	CATATG	1 cut(s)	2011
FbaI	TGATCA	2 cut(s)	2080, 2677
FblI	GTMKAC	2 cut(s)	1273, 2384
FriOI	GRGCYC	3 cut(s)	445, 1203, 1967
FspBI	CTAG	5 cut(s)	833, 1053, 1422, 1485, 1838
GlaI	GCGC	4 cut(s)	137, 453, 478, 570
GsaI	CCCAGC	1 cut(s)	972
GsuI	CTGGAG	3 cut(s)	911, 1664, 2229
HaeII	RGCGCY	2 cut(s)	480, 572
HaeIII	GGCC	7 cut(s)	234, 323, 443, 1737, 1965, 2143, 2292
HapII	CCGG	6 cut(s)	12, 408, 561, 698, 788, 901
HgaI	GACGC	6 cut(s)	272, 318, 400, 407, 428, 440
HhaI	GCGC	4 cut(s)	138, 454, 479, 571
Hin1I	GRCGYC	6 cut(s)	264, 399, 411, 432, 477, 2517
Hin6I	GCGC	4 cut(s)	136, 452, 477, 569
HinP1I	GCGC	4 cut(s)	136, 452, 477, 569
HincII	GTYRAC	1 cut(s)	1188
HindII	GTYRAC	1 cut(s)	1188
HindIII	AAGCTT	2 cut(s)	742, 2628
HpaII	CCGG	6 cut(s)	12, 408, 561, 698, 788, 901
HphI	GGTGA	9 cut(s)	136, 352, 892, 1077, 1253, 1904, 2049, 2147, 2363
Hpy166II	GTNNAC	5 cut(s)	592, 1188, 1274, 2120, 2385
Hpy8I	GTNNAC	5 cut(s)	592, 1188, 1274, 2120, 2385
Hpy99I	CGWCG	4 cut(s)	194, 233, 266, 434
HpyAV	CCTTC	7 cut(s)	457, 1928, 1953, 1977, 2032, 2154, 2596
HpyCH4III	ACNGT	5 cut(s)	776, 880, 886, 1400, 2490
HpyCH4IV	ACGT	2 cut(s)	802, 2517
HpyF10VI	GCNNNNNNNGC	6 cut(s)	440, 449, 474, 2243, 2336, 2636
HpyF3I	CTNAG	8 cut(s)	80, 582, 1014, 1947, 1989, 2126, 2466, 2652
HpySE526I	ACGT	2 cut(s)	802, 2517
Hsp92I	GRCGYC	6 cut(s)	264, 399, 411, 432, 477, 2517
HspAI	GCGC	4 cut(s)	136, 452, 477, 569
KasI	GGCGCC	1 cut(s)	476
Kpn2I	TCCGGA	1 cut(s)	787
Ksp22I	TGATCA	2 cut(s)	2080, 2677
LguI	GCTCTTC	1 cut(s)	2346
LmnI	GCTCC	5 cut(s)	249, 538, 725, 877, 1915
Lsp1109I	GCAGC	8 cut(s)	642, 744, 821, 824, 856, 1662, 2103, 2676
LweI	GCATC	5 cut(s)	147, 2177, 2326, 2592, 2708
MaeI	CTAG	5 cut(s)	833, 1053, 1422, 1485, 1838
MaeII	ACGT	2 cut(s)	802, 2517
MaeIII	GTNAC	6 cut(s)	856, 880, 1400, 1598, 1635, 2055
MbiI	CCGCTC	1 cut(s)	728
MflI	RGATCY	8 cut(s)	196, 645, 1379, 1586, 1823, 1976, 2302, 2644
MhlI	GDGCHC	4 cut(s)	445, 825, 1203, 1967
MlsI	TGGCCA	1 cut(s)	2292
MluI	ACGCGT	1 cut(s)	420
MluNI	TGGCCA	1 cut(s)	2292
Mly113I	GGCGCC	1 cut(s)	477
MlyI	GAGTC	8 cut(s)	308, 398, 587, 902, 974, 1319, 1325, 1544
MmeI	TCCRAC	3 cut(s)	189, 703, 2464
Mox20I	TGGCCA	1 cut(s)	2292
MroI	TCCGGA	1 cut(s)	787
MroXI	GAANNNNTTC	3 cut(s)	1371, 1942, 2196
MscI	TGGCCA	1 cut(s)	2292
MseI	TTAA	1 cut(s)	660
Msp20I	TGGCCA	1 cut(s)	2292
MspA1I	CMGCKG	2 cut(s)	815, 1642
MspI	CCGG	6 cut(s)	12, 408, 561, 698, 788, 901
MspR9I	CCNGG	4 cut(s)	446, 643, 719, 2707
Mva1269I	GAATGC	1 cut(s)	841
MvaI	CCWGG	4 cut(s)	446, 643, 719, 2707
MvnI	CGCG	4 cut(s)	171, 329, 422, 429
MwoI	GCNNNNNNNGC	6 cut(s)	440, 449, 474, 2243, 2336, 2636
NarI	GGCGCC	1 cut(s)	477
NcoI	CCATGG	1 cut(s)	117
NdeI	CATATG	1 cut(s)	2011
NmeAIII	GCCGAG	4 cut(s)	505, 575, 786, 2559
NmuCI	GTSAC	3 cut(s)	856, 880, 2055
NruI	TCGCGA	1 cut(s)	429
NspI	RCATGY	4 cut(s)	1675, 1987, 2480, 2732
PaeI	GCATGC	2 cut(s)	1675, 2480
PaeR7I	CTCGAG	1 cut(s)	200
PagI	TCATGA	2 cut(s)	769, 1699
PciI	ACATGT	1 cut(s)	1983
PciSI	GCTCTTC	1 cut(s)	2346
PcsI	WCGNNNNNNNCGW	4 cut(s)	120, 198, 270, 426
PctI	GAATGC	1 cut(s)	841
PdmI	GAANNNNTTC	3 cut(s)	1371, 1942, 2196
PfeI	GAWTC	4 cut(s)	21, 1112, 2533, 2712
PleI	GAGTC	8 cut(s)	307, 398, 587, 901, 974, 1319, 1324, 1543
PluTI	GGCGCC	1 cut(s)	480
PpsI	GAGTC	8 cut(s)	307, 398, 587, 901, 974, 1319, 1324, 1543
Ppu21I	YACGTR	1 cut(s)	803
PpuMI	RGGWCCY	2 cut(s)	84, 2429
PscI	ACATGT	1 cut(s)	1983
PshAI	GACNNNNGTC	1 cut(s)	423
Psp124BI	GAGCTC	1 cut(s)	1203
Psp5II	RGGWCCY	2 cut(s)	84, 2429
Psp6I	CCWGG	4 cut(s)	444, 641, 717, 2705
PspEI	GGTNACC	1 cut(s)	2055
PspFI	CCCAGC	1 cut(s)	968
PspGI	CCWGG	4 cut(s)	444, 641, 717, 2705
PspOMI	GGGCCC	2 cut(s)	441, 1963
PspPPI	RGGWCCY	2 cut(s)	84, 2429
PstI	CTGCAG	3 cut(s)	1680, 2266, 2694
PstNI	CAGNNNCTG	6 cut(s)	460, 648, 815, 1115, 2432, 2465
PsuI	RGATCY	8 cut(s)	196, 645, 1379, 1586, 1823, 1976, 2302, 2644
PvuII	CAGCTG	2 cut(s)	815, 1642
RruI	TCGCGA	1 cut(s)	429
RsaI	GTAC	4 cut(s)	458, 1237, 2223, 2613
RsaNI	GTAC	4 cut(s)	457, 1236, 2222, 2612
SacI	GAGCTC	1 cut(s)	1203
SapI	GCTCTTC	1 cut(s)	2346
SaqAI	TTAA	1 cut(s)	660
ScaI	AGTACT	1 cut(s)	2613
SchI	GAGTC	8 cut(s)	308, 398, 587, 902, 974, 1319, 1325, 1544
ScrFI	CCNGG	4 cut(s)	446, 643, 719, 2707
SduI	GDGCHC	4 cut(s)	445, 825, 1203, 1967
SfaNI	GCATC	5 cut(s)	147, 2177, 2326, 2592, 2708
SfcI	CTRYAG	6 cut(s)	1251, 1676, 2262, 2385, 2634, 2690
SfoI	GGCGCC	1 cut(s)	478
Sfr274I	CTCGAG	1 cut(s)	200
SinI	GGWCC	5 cut(s)	14, 84, 2120, 2429, 2567
SlaI	CTCGAG	1 cut(s)	200
SmlI	CTYRAG	4 cut(s)	200, 392, 1008, 1739
SmoI	CTYRAG	4 cut(s)	200, 392, 1008, 1739
SphI	GCATGC	2 cut(s)	1675, 2480
SspDI	GGCGCC	1 cut(s)	476
SspMI	CTAG	5 cut(s)	833, 1053, 1422, 1485, 1838
SstI	GAGCTC	1 cut(s)	1203
StyD4I	CCNGG	4 cut(s)	444, 641, 717, 2705
StyI	CCWWGG	2 cut(s)	117, 2187
TaaI	ACNGT	5 cut(s)	776, 880, 886, 1400, 2490
TaiI	ACGT	2 cut(s)	805, 2520
TaqI	TCGA	6 cut(s)	123, 192, 201, 707, 845, 1831
TatI	WGTACW	1 cut(s)	2611
TauI	GCSGC	3 cut(s)	227, 452, 569
TfiI	GAWTC	4 cut(s)	21, 1112, 2533, 2712
Tru1I	TTAA	1 cut(s)	660
Tru9I	TTAA	1 cut(s)	660
TscAI	CASTG	1 cut(s)	1503
TseFI	GTSAC	3 cut(s)	856, 880, 2055
TseI	GCWGC	8 cut(s)	655, 757, 809, 812, 869, 1675, 2091, 2689
Tsp45I	GTSAC	3 cut(s)	856, 880, 2055
TspDTI	ATGAA	6 cut(s)	758, 1464, 1484, 1675, 2193, 2640
TspGWI	ACGGA	6 cut(s)	875, 1488, 1599, 1896, 2388, 2606
TspRI	CASTG	1 cut(s)	1503
VpaK11BI	GGWCC	5 cut(s)	14, 84, 2120, 2429, 2567
XapI	RAATTY	4 cut(s)	1211, 1877, 1902, 2617
XceI	RCATGY	4 cut(s)	1675, 1987, 2480, 2732
XcmI	CCANNNNNNNNNTGG	3 cut(s)	442, 1714, 2655
XhoI	CTCGAG	1 cut(s)	200
XmiI	GTMKAC	2 cut(s)	1273, 2384
XmnI	GAANNNNTTC	3 cut(s)	1371, 1942, 2196
XspI	CTAG	5 cut(s)	833, 1053, 1422, 1485, 1838
ZraI	GACGTC	1 cut(s)	2518
ZrmI	AGTACT	1 cut(s)	2613

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.