Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003858.1

Orthogroup ID

OG0011122

Physical Location & Seq

Genomic Coordinates Reverse (-)

20436 .. 24337

Gene Structure 3902 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003858.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2796 bp

atgagtttcgcaggacccagaatctcaaaacccacaaaacccccaaactccacacccccacaaaaccagctcaccccatcttcaaggtcttcttcctcttccctctcctcccacctcgccatggtggaactcaagcagaggatcctcacctccctctccaaactctccgaccgcgacacctaccaaatcgccgtcgaagatctcgagaaaatcatccagaccctcgccgccgacggcctcccggtgctcctcaactgcctctacgacgcctccgccgaccccaaacccgccgtcaagaaagagtctctacgcctcctcgcattgctctcctcctcccaccccgatttcacgtccacccacctcacaaagatcatctcccacatcgtcaaacgcctcaaggacgccgactccggcgtccgggacgcgtgtcgcgacgccattggggcgctggcggcgcagtacttgaagggggagagcggcggcgacaatgttgggtcggcggtggtggggttgtttgtgaagccgttgtttgaggccatgggggagcagaacaaaggggtgcaatccggtgcggccgtgtgtatggctaagattgtggactcggcttcggaccctcctgtccctgcttttcagaagctctgtcccaggatctgtaagctgcttaacaatcctaacttcctggctaaggcttcgctgttgcccgtggtttcgagcttgtctcaggttggagcggtagcaccgcaaagcttggataatttgctgccaactgtacatgactgtcttggaagtccggattgggcaacgcgtaaagcagcagctgatgtgctcattgcactagcattgcattcgagtaacttgatcacagatagagctgcttccacggtcactgtgcttgagtcttgccggtttgacaagataaaacccgtcagagatagcatgacagaagcattgcagttttggaaaaagattgcggggggagatgactctccaaaagagcagaaaaccccatctcatggaaatcctgaatcagctgaggtttcagaaaggaatgagccaaaagtttcaaagcctagtgagaaaacagaacaagcagcaaaggttgcatctaatggttcttcccctacttcagattctgtttctaaagccaaaggtagtactattccagataaagctgttggacttctgaagaagaaaccgcctgtcttgactgacaaagagctaaacccagaattcttccagaaacttgaaaggggttctggcgagttgcctgtagaggtagctgttcctcgtagacatctcaatacttcaaactcaagtaatgaggtagaaaccgagtcaaatgctatggactcaaaggaaaggtcaaacaacattggaagcagccattcagaagattttcgtggatctttcaatggtaaataccgtaatattgagagaggaattgctggtctgtattctaaacaaagagatcatgatgacttggcacgggataaatggccagaagaaagaatgaacggaaaagactcgagaatgagagcagtggatgttgatgataggactgatattaatcaaagggagtcatccagcagtcgtgcagggttctctaaaactgatggtcaatctgacggatccttcgccaatagcaaaggaaattggttggctatccaaaggcagttgttacagctggagagacaacaagctcatttgatgagcatgctgcaggatttcatgggggggtctcatgacaccatggtaactttggagaacagggtaaggggccttgagagaattgtggaagacatggcacgggatttatcaatatcttcaggtaggagaggtggtaattttgcgatggggtttgagggatctaatcgacaactaggcaagtataatggtttccctgactatgcgagtgccaaatttggaagaggtggtgatggacgaattccgtttggggaaagatattctcaaactgatggaattgtttcggacatgaggggaaggggcccttcttggagatctgacatgtccgaggtgtgggatttttctacatatggtggttctaggaatgggcagaggaaggctgttggtggtggtcccatggatggtaggtcacccaagtcggaaaatggaagtgatcatggtggcagcaggcgggcatgggagaaagggagtggacttctcaggtttggtgaggggccttccgcaagaagtgtttggcaagcatcgaaagatgaagctaccttggaagcaattcgtgtggctggagaggataatggaccatcaagaacagcaagagtagctatgcctgaattgactgcagaggctttgggagatgatagtgttggccaagatcgggatccaatctggacttcttggactaatgcaatggatgcttttcaagtgggtgatatggatacagcctatgcggaagtattgtctacaggagatgatcacttgcttgtaaaactaatggatagatcaggtcctgtgattgaccaactttcaaatgaaacagcaaccgaggtcttgcatgcggttggacagtttttaccagagcaaaacttgtttgacgtctgcctgtcttggattcagcagttggttgaaatagtgctggaaaatggacctgatgtcctcggcattccaaatgaagtaaggaaggagatagtactgaatttgcatgaagcttctgtagcaatggatccacctgaggactgggagggtgcaatgcctgatcaactattgctgcagttggcatccacctggggaatcaatctgcaacaacatgccaaataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005856 GO:0005874 GO:0005881 GO:0005938 GO:0007275 GO:0008017 GO:0008092 GO:0008150 GO:0009653 GO:0009826 GO:0009987 GO:0010005 GO:0010031 GO:0015630 GO:0015631 GO:0016043 GO:0016049 GO:0030863 GO:0030981 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044464 GO:0048589 GO:0048856 GO:0048869 GO:0050879 GO:0055028 GO:0060560 GO:0071840 GO:0071944 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0099568

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

931

Amino Acids

101.0

Weight (kDa)

5.73

Isoelectric Point (pI)

38.7

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011122)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G27060
fragaria_vesca	FvH4_3g22240
malus_domestica	MD03G1206600.v1.1 MD11G1222000.v1.1
prunus_persica	Prupe.4G209400_v2.0.a1 Prupe.4G209400_v2.0.a1
pyrus_communis	pycom03g15640 pycom11g19580
rosa_chinensis	RchiOBHm_Chr5g0038291
rosa_laevigata	RLG00000033844
rosa_multiflora	Rmu_sc0000764.1_g000003 Rmu_sc0003858.1_g000004 Rmu_sc0035524.1_g000001
rosa_roxburghii	Rroxscaffold_1G00042730
rosa_rugosa	Rorug05G0171800
rosa_samantha	Rh5AG259100 Rh5BG262900 Rh5CG295300 Rh5DG271900
rosa_wichuraiana	Rw5G024250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	413, 617
AatII	GACGTC	1 cut(s)	2577
AccB7I	CCANNNNNTGG	1 cut(s)	1013
AccBSI	CCGCTC	2 cut(s)	477, 731
AccI	GTMKAC	2 cut(s)	1291, 2441
AccII	CGCG	4 cut(s)	174, 425, 432, 805
AccIII	TCCGGA	1 cut(s)	790
AcoI	YGGCCR	3 cut(s)	573, 1496, 2347
AcsI	RAATTY	4 cut(s)	1229, 1919, 1944, 2674
AcuI	CTGAAG	3 cut(s)	1110, 1205, 1809
AcyI	GRCGYC	5 cut(s)	267, 402, 414, 435, 2574
AfaI	GTAC	4 cut(s)	461, 771, 1156, 2670
AfiI	CCNNNNNNNGG	7 cut(s)	121, 417, 685, 1013, 2037, 2105, 2356
AflIII	ACRYGT	3 cut(s)	423, 803, 2025
AgsI	TTSAA	9 cut(s)	84, 466, 1065, 1247, 1308, 1411, 2402, 2508, 2606
AhdI	GACNNNNNGTC	1 cut(s)	2630
AjiI	CACGTC	1 cut(s)	351
AjnI	CCWGG	3 cut(s)	644, 678, 2762
AjuI	GAANNNNNNNTTGG	4 cut(s)	778, 810, 2356, 2388
Alw21I	GWGCWC	2 cut(s)	249, 828
Alw26I	GTCTC	4 cut(s)	309, 723, 1684, 1743
AlwNI	CAGNNNCTG	4 cut(s)	651, 818, 1133, 2489
Ama87I	CYCGRG	2 cut(s)	203, 1525
Aor13HI	TCCGGA	1 cut(s)	790
AoxI	GGCC	8 cut(s)	235, 534, 573, 1496, 1777, 2005, 2198, 2347
ApaI	GGGCCC	1 cut(s)	2009
ApoI	RAATTY	4 cut(s)	1229, 1919, 1944, 2674
ArsI	GACNNNNNNTTYG	6 cut(s)	276, 308, 1346, 1378, 1616, 1648
AseI	ATTAAT	1 cut(s)	1566
Asp700I	GAANNNNTTC	3 cut(s)	1395, 1984, 2253
AspLEI	GCGC	2 cut(s)	448, 457
AsuC2I	CCSGG	2 cut(s)	242, 419
AsuHPI	GGTGA	6 cut(s)	64, 139, 1946, 2106, 2204, 2420
AvaI	CYCGRG	2 cut(s)	203, 1525
AvaII	GGWCC	6 cut(s)	14, 610, 2096, 2279, 2486, 2624
AxyI	CCTNAGG	1 cut(s)	2709
BaeGI	GKGCMC	1 cut(s)	2009
BalI	TGGCCA	2 cut(s)	1498, 2349
BamHI	GGATCC	4 cut(s)	141, 1628, 2359, 2701
BanII	GRGCYC	1 cut(s)	2009
BbsI	GAAGAC	2 cut(s)	81, 1803
Bbv12I	GWGCWC	2 cut(s)	249, 828
BbvCI	CCTCAGC	1 cut(s)	1032
BccI	CCATC	8 cut(s)	85, 1015, 1607, 1846, 1931, 1970, 2099, 2290
BceAI	ACGGC	5 cut(s)	176, 250, 275, 508, 560
BcgI	CGANNNNNNTGC	4 cut(s)	828, 862, 1322, 1356
BciT130I	CCWGG	3 cut(s)	646, 680, 2764
BciVI	GTATCC	1 cut(s)	2410
BclI	TGATCA	4 cut(s)	858, 2137, 2452, 2734
BcnI	CCSGG	2 cut(s)	242, 419
BcoDI	GTCTC	4 cut(s)	309, 723, 1684, 1743
BfaI	CTAG	4 cut(s)	836, 1071, 1880, 2064
BfmI	CTRYAG	6 cut(s)	1269, 1718, 2319, 2442, 2691, 2747
BfoI	RGCGCY	1 cut(s)	449
BfuI	GTATCC	1 cut(s)	2410
BglI	GCCNNNNNGGC	1 cut(s)	443
BglII	AGATCT	2 cut(s)	199, 2018
BmcAI	AGTACT	3 cut(s)	461, 1156, 2670
Bme1390I	CCNGG	5 cut(s)	242, 419, 646, 680, 2764
Bme18I	GGWCC	6 cut(s)	14, 610, 2096, 2279, 2486, 2624
BmeRI	GACNNNNNGTC	1 cut(s)	2630
BmeT110I	CYCGRG	2 cut(s)	203, 1525
BmgBI	CACGTC	1 cut(s)	351
BmrFI	CCNGG	5 cut(s)	242, 419, 646, 680, 2764
BmrI	ACTGGG	1 cut(s)	2725
BmsI	GCATC	4 cut(s)	1112, 2234, 2383, 2765
BmuI	ACTGGG	1 cut(s)	2725
BoxI	GACNNNNGTC	1 cut(s)	426
BpiI	GAAGAC	2 cut(s)	81, 1803
BplI	GAGNNNNNCTC	2 cut(s)	703, 735
BpmI	CTGGAG	2 cut(s)	1706, 2286
Bpu10I	CCTNAGC	2 cut(s)	684, 1032
BpuEI	CTTGAG	5 cut(s)	116, 380, 914, 1297, 1802
BpuMI	CCSGG	2 cut(s)	242, 419
BsaBI	GATNNNNATC	2 cut(s)	1566, 2358
BsaHI	GRCGYC	5 cut(s)	267, 402, 414, 435, 2574
BsaI	GGTCTC	1 cut(s)	1743
BsaWI	WCCGGW	2 cut(s)	566, 790
BsaXI	ACNNNNNCTCC	6 cut(s)	254, 284, 392, 422, 1825, 1855
Bsc4I	CCNNNNNNNGG	7 cut(s)	121, 417, 685, 1013, 2037, 2105, 2356
Bse118I	RCCGGY	1 cut(s)	903
Bse1I	ACTGG	1 cut(s)	2720
Bse21I	CCTNAGG	1 cut(s)	2709
Bse3DI	GCAATG	7 cut(s)	320, 828, 839, 947, 2394, 2703, 2733
Bse8I	GATNNNNATC	2 cut(s)	1566, 2358
BseAI	TCCGGA	1 cut(s)	790
BseBI	CCWGG	3 cut(s)	646, 680, 2764
BseGI	GGATG	6 cut(s)	213, 1549, 1580, 2110, 2398, 2756
BseJI	GATNNNNATC	2 cut(s)	1566, 2358
BseLI	CCNNNNNNNGG	7 cut(s)	121, 417, 685, 1013, 2037, 2105, 2356
BseMI	GCAATG	7 cut(s)	320, 828, 839, 947, 2394, 2703, 2733
BseMII	CTCAG	4 cut(s)	734, 1023, 2197, 2700
BseNI	ACTGG	1 cut(s)	2720
BseRI	GAGGAG	5 cut(s)	97, 239, 305, 319, 322
BseSI	GKGCMC	1 cut(s)	2009
BseX3I	CGGCCG	1 cut(s)	573
BsgI	GTGCAG	1 cut(s)	1614
Bsh1236I	CGCG	4 cut(s)	174, 425, 432, 805
Bsh1285I	CGRYCG	2 cut(s)	172, 576
BshFI	GGCC	8 cut(s)	237, 536, 575, 1498, 1779, 2007, 2200, 2349
BsiEI	CGRYCG	2 cut(s)	172, 576
BsiHKAI	GWGCWC	2 cut(s)	249, 828
BsiHKCI	CYCGRG	2 cut(s)	203, 1525
BsiSI	CCGG	6 cut(s)	242, 411, 418, 567, 791, 904
BslFI	GGGAC	4 cut(s)	434, 605, 627, 2082
BslI	CCNNNNNNNGG	7 cut(s)	121, 417, 685, 1013, 2037, 2105, 2356
BsmAI	GTCTC	4 cut(s)	309, 723, 1684, 1743
BsmFI	GGGAC	4 cut(s)	434, 605, 627, 2082
BsmI	GAATGC	2 cut(s)	844, 2640
BsnI	GGCC	8 cut(s)	237, 536, 575, 1498, 1779, 2007, 2200, 2349
Bso31I	GGTCTC	1 cut(s)	1743
BsoBI	CYCGRG	2 cut(s)	203, 1525
Bsp120I	GGGCCC	1 cut(s)	2005
Bsp1286I	GDGCHC	3 cut(s)	249, 828, 2009
Bsp13I	TCCGGA	1 cut(s)	790
Bsp1407I	TGTACA	1 cut(s)	769
Bsp19I	CCATGG	4 cut(s)	120, 537, 1749, 2100
Bsp68I	TCGCGA	1 cut(s)	432
BspANI	GGCC	8 cut(s)	237, 536, 575, 1498, 1779, 2007, 2200, 2349
BspCNI	CTCAG	4 cut(s)	733, 1024, 2196, 2701
BspEI	TCCGGA	1 cut(s)	790
BspFNI	CGCG	4 cut(s)	174, 425, 432, 805
BspHI	TCATGA	2 cut(s)	1471, 1741
BspMAI	CTGCAG	3 cut(s)	1722, 2323, 2751
BspTNI	GGTCTC	1 cut(s)	1743
BsrBI	CCGCTC	2 cut(s)	477, 731
BsrDI	GCAATG	7 cut(s)	320, 828, 839, 947, 2394, 2703, 2733
BsrFI	RCCGGY	1 cut(s)	903
BsrGI	TGTACA	1 cut(s)	769
BsrI	ACTGG	1 cut(s)	2720
BssAI	RCCGGY	1 cut(s)	903
BssNI	GRCGYC	5 cut(s)	267, 402, 414, 435, 2574
BssT1I	CCWWGG	5 cut(s)	120, 537, 1749, 2100, 2244
Bst2UI	CCWGG	3 cut(s)	646, 680, 2764
Bst4CI	ACNGT	6 cut(s)	769, 779, 883, 889, 1424, 2547
Bst6I	CTCTTC	2 cut(s)	103, 1921
BstACI	GRCGYC	5 cut(s)	267, 402, 414, 435, 2574
BstAPI	GCANNNNNTGC	2 cut(s)	1100, 2393
BstAUI	TGTACA	1 cut(s)	769
BstC8I	GCNNGC	6 cut(s)	450, 1715, 2153, 2157, 2223, 2535
BstDEI	CTNAG	6 cut(s)	588, 684, 720, 1032, 2183, 2709
BstDSI	CCRYGG	6 cut(s)	120, 537, 702, 879, 1749, 2100
BstEII	GGTNACC	1 cut(s)	2112
BstENI	CCTNNNNNAGG	1 cut(s)	683
BstF5I	GGATG	6 cut(s)	213, 1549, 1580, 2110, 2398, 2756
BstFNI	CGCG	4 cut(s)	174, 425, 432, 805
BstH2I	RGCGCY	1 cut(s)	449
BstHHI	GCGC	2 cut(s)	448, 457
BstMAI	GTCTC	4 cut(s)	309, 723, 1684, 1743
BstMCI	CGRYCG	2 cut(s)	172, 576
BstMWI	GCNNNNNNNGC	7 cut(s)	443, 452, 454, 1100, 2300, 2393, 2693
BstNI	CCWGG	3 cut(s)	646, 680, 2764
BstNSI	RCATGY	4 cut(s)	1717, 2029, 2537, 2789
BstPAI	GACNNNNGTC	1 cut(s)	426
BstPI	GGTNACC	1 cut(s)	2112
BstSCI	CCNGG	5 cut(s)	240, 417, 644, 678, 2762
BstSFI	CTRYAG	6 cut(s)	1269, 1718, 2319, 2442, 2691, 2747
BstSLI	GKGCMC	1 cut(s)	2009
BstUI	CGCG	4 cut(s)	174, 425, 432, 805
BstV2I	GAAGAC	2 cut(s)	81, 1803
BstX2I	RGATCY	9 cut(s)	141, 199, 648, 1403, 1628, 1865, 2018, 2359, 2701
BstYI	RGATCY	9 cut(s)	141, 199, 648, 1403, 1628, 1865, 2018, 2359, 2701
BstZI	CGGCCG	1 cut(s)	573
Bsu36I	CCTNAGG	1 cut(s)	2709
BsuI	GTATCC	1 cut(s)	2410
BsuRI	GGCC	8 cut(s)	237, 536, 575, 1498, 1779, 2007, 2200, 2349
BtgI	CCRYGG	6 cut(s)	120, 537, 702, 879, 1749, 2100
BtgZI	GCGATG	1 cut(s)	1865
BtrI	CACGTC	1 cut(s)	351
BtsCI	GGATG	6 cut(s)	213, 1549, 1580, 2110, 2398, 2756
BtsI	GCAGTG	1 cut(s)	1545
BtsIMutI	CAGTG	2 cut(s)	885, 1545
BtuMI	TCGCGA	1 cut(s)	432
Cac8I	GCNNGC	6 cut(s)	450, 1715, 2153, 2157, 2223, 2535
CaiI	CAGNNNCTG	4 cut(s)	651, 818, 1133, 2489
CciI	TCATGA	2 cut(s)	1471, 1741
CfoI	GCGC	2 cut(s)	448, 457
Cfr10I	RCCGGY	1 cut(s)	903
CseI	GACGC	5 cut(s)	275, 403, 410, 431, 443
Csp6I	GTAC	4 cut(s)	460, 770, 1155, 2669
CspCI	CAANNNNNGTGG	2 cut(s)	2241, 2276
CviQI	GTAC	4 cut(s)	460, 770, 1155, 2669
DdeI	CTNAG	6 cut(s)	588, 684, 720, 1032, 2183, 2709
DrdI	GACNNNNNNGTC	2 cut(s)	413, 617
DriI	GACNNNNNGTC	1 cut(s)	2630
DseDI	GACNNNNNNGTC	2 cut(s)	413, 617
EaeI	YGGCCR	3 cut(s)	573, 1496, 2347
EagI	CGGCCG	1 cut(s)	573
Eam1104I	CTCTTC	2 cut(s)	103, 1921
Eam1105I	GACNNNNNGTC	1 cut(s)	2630
EarI	CTCTTC	2 cut(s)	103, 1921
EciI	GGCGGA	1 cut(s)	262
EclXI	CGGCCG	1 cut(s)	573
Eco130I	CCWWGG	5 cut(s)	120, 537, 1749, 2100, 2244
Eco24I	GRGCYC	1 cut(s)	2009
Eco31I	GGTCTC	1 cut(s)	1743
Eco47I	GGWCC	6 cut(s)	14, 610, 2096, 2279, 2486, 2624
Eco52I	CGGCCG	1 cut(s)	573
Eco57I	CTGAAG	3 cut(s)	1110, 1205, 1809
Eco81I	CCTNAGG	1 cut(s)	2709
Eco88I	CYCGRG	2 cut(s)	203, 1525
Eco91I	GGTNACC	1 cut(s)	2112
EcoNI	CCTNNNNNAGG	1 cut(s)	683
EcoO109I	RGGNCCY	6 cut(s)	14, 1777, 2005, 2006, 2198, 2486
EcoO65I	GGTNACC	1 cut(s)	2112
EcoRI	GAATTC	2 cut(s)	1229, 1944
EcoRII	CCWGG	3 cut(s)	644, 678, 2762
EcoT14I	CCWWGG	5 cut(s)	120, 537, 1749, 2100, 2244
EcoT38I	GRGCYC	1 cut(s)	2009
ErhI	CCWWGG	5 cut(s)	120, 537, 1749, 2100, 2244
FalI	AAGNNNNNCTT	4 cut(s)	76, 108, 1993, 2025
FaqI	GGGAC	4 cut(s)	434, 605, 627, 2082
FauI	CCCGC	3 cut(s)	295, 964, 2148
FauNDI	CATATG	1 cut(s)	2053
FbaI	TGATCA	4 cut(s)	858, 2137, 2452, 2734
FblI	GTMKAC	2 cut(s)	1291, 2441
FokI	GGATG	6 cut(s)	200, 1556, 1567, 2117, 2405, 2743
FriOI	GRGCYC	1 cut(s)	2009
FspBI	CTAG	4 cut(s)	836, 1071, 1880, 2064
GlaI	GCGC	2 cut(s)	447, 456
GsuI	CTGGAG	2 cut(s)	1706, 2286
HaeII	RGCGCY	1 cut(s)	449
HaeIII	GGCC	8 cut(s)	237, 536, 575, 1498, 1779, 2007, 2200, 2349
HapII	CCGG	6 cut(s)	242, 411, 418, 567, 791, 904
HgaI	GACGC	5 cut(s)	275, 403, 410, 431, 443
HhaI	GCGC	2 cut(s)	448, 457
Hin1I	GRCGYC	5 cut(s)	267, 402, 414, 435, 2574
Hin6I	GCGC	2 cut(s)	446, 455
HinP1I	GCGC	2 cut(s)	446, 455
HindIII	AAGCTT	2 cut(s)	745, 2685
HpaII	CCGG	6 cut(s)	242, 411, 418, 567, 791, 904
HphI	GGTGA	6 cut(s)	64, 139, 1946, 2106, 2204, 2420
Hpy166II	GTNNAC	5 cut(s)	354, 598, 1292, 2177, 2442
Hpy8I	GTNNAC	5 cut(s)	354, 598, 1292, 2177, 2442
Hpy99I	CGWCG	4 cut(s)	197, 236, 269, 437
HpyAV	CCTTC	7 cut(s)	460, 1642, 1995, 2019, 2074, 2211, 2653
HpyCH4III	ACNGT	6 cut(s)	769, 779, 883, 889, 1424, 2547
HpyCH4IV	ACGT	2 cut(s)	350, 2574
HpyF10VI	GCNNNNNNNGC	7 cut(s)	443, 452, 454, 1100, 2300, 2393, 2693
HpyF3I	CTNAG	6 cut(s)	588, 684, 720, 1032, 2183, 2709
HpySE526I	ACGT	2 cut(s)	350, 2574
Hsp92I	GRCGYC	5 cut(s)	267, 402, 414, 435, 2574
HspAI	GCGC	2 cut(s)	446, 455
Kpn2I	TCCGGA	1 cut(s)	790
Ksp22I	TGATCA	4 cut(s)	858, 2137, 2452, 2734
LmnI	GCTCC	3 cut(s)	252, 544, 728
LweI	GCATC	4 cut(s)	1112, 2234, 2383, 2765
MaeI	CTAG	4 cut(s)	836, 1071, 1880, 2064
MaeII	ACGT	2 cut(s)	350, 2574
MaeIII	GTNAC	5 cut(s)	851, 883, 1677, 1753, 2112
MbiI	CCGCTC	2 cut(s)	477, 731
MflI	RGATCY	9 cut(s)	141, 199, 648, 1403, 1628, 1865, 2018, 2359, 2701
MhlI	GDGCHC	3 cut(s)	249, 828, 2009
MlsI	TGGCCA	2 cut(s)	1498, 2349
MluI	ACGCGT	2 cut(s)	423, 803
MluNI	TGGCCA	2 cut(s)	1498, 2349
MlyI	GAGTC	9 cut(s)	311, 401, 593, 905, 977, 1343, 1343, 1517, 1586
MmeI	TCCRAC	5 cut(s)	192, 706, 1156, 2103, 2521
Mox20I	TGGCCA	2 cut(s)	1498, 2349
MroI	TCCGGA	1 cut(s)	790
MroXI	GAANNNNTTC	3 cut(s)	1395, 1984, 2253
MscI	TGGCCA	2 cut(s)	1498, 2349
MseI	TTAA	2 cut(s)	663, 1566
Msp20I	TGGCCA	2 cut(s)	1498, 2349
MspA1I	CMGCKG	3 cut(s)	818, 1031, 1684
MspI	CCGG	6 cut(s)	242, 411, 418, 567, 791, 904
MspR9I	CCNGG	5 cut(s)	242, 419, 646, 680, 2764
Mva1269I	GAATGC	2 cut(s)	844, 2640
MvaI	CCWGG	3 cut(s)	646, 680, 2764
MvnI	CGCG	4 cut(s)	174, 425, 432, 805
MwoI	GCNNNNNNNGC	7 cut(s)	443, 452, 454, 1100, 2300, 2393, 2693
NciI	CCSGG	2 cut(s)	242, 419
NcoI	CCATGG	4 cut(s)	120, 537, 1749, 2100
NdeI	CATATG	1 cut(s)	2053
NmeAIII	GCCGAG	2 cut(s)	581, 2616
NmuCI	GTSAC	2 cut(s)	883, 2112
NruI	TCGCGA	1 cut(s)	432
NspI	RCATGY	4 cut(s)	1717, 2029, 2537, 2789
PaeI	GCATGC	2 cut(s)	1717, 2537
PaeR7I	CTCGAG	2 cut(s)	203, 1525
PagI	TCATGA	2 cut(s)	1471, 1741
PciI	ACATGT	1 cut(s)	2025
PcsI	WCGNNNNNNNCGW	3 cut(s)	201, 273, 429
PctI	GAATGC	2 cut(s)	844, 2640
PdmI	GAANNNNTTC	3 cut(s)	1395, 1984, 2253
PfeI	GAWTC	5 cut(s)	21, 1025, 1130, 2590, 2769
PflMI	CCANNNNNTGG	1 cut(s)	1013
PfoI	TCCNGGA	1 cut(s)	417
PleI	GAGTC	9 cut(s)	310, 401, 593, 904, 977, 1342, 1343, 1517, 1585
PpsI	GAGTC	9 cut(s)	310, 401, 593, 904, 977, 1342, 1343, 1517, 1585
PpuMI	RGGWCCY	2 cut(s)	14, 2486
PscI	ACATGT	1 cut(s)	2025
PshAI	GACNNNNGTC	1 cut(s)	426
PshBI	ATTAAT	1 cut(s)	1566
Psp5II	RGGWCCY	2 cut(s)	14, 2486
Psp6I	CCWGG	3 cut(s)	644, 678, 2762
PspEI	GGTNACC	1 cut(s)	2112
PspGI	CCWGG	3 cut(s)	644, 678, 2762
PspOMI	GGGCCC	1 cut(s)	2005
PspPPI	RGGWCCY	2 cut(s)	14, 2486
PstI	CTGCAG	3 cut(s)	1722, 2323, 2751
PstNI	CAGNNNCTG	4 cut(s)	651, 818, 1133, 2489
PsuI	RGATCY	9 cut(s)	141, 199, 648, 1403, 1628, 1865, 2018, 2359, 2701
PvuII	CAGCTG	3 cut(s)	818, 1031, 1684
RruI	TCGCGA	1 cut(s)	432
RsaI	GTAC	4 cut(s)	461, 771, 1156, 2670
RsaNI	GTAC	4 cut(s)	460, 770, 1155, 2669
SaqAI	TTAA	2 cut(s)	663, 1566
ScaI	AGTACT	3 cut(s)	461, 1156, 2670
SchI	GAGTC	9 cut(s)	311, 401, 593, 905, 977, 1343, 1343, 1517, 1586
ScrFI	CCNGG	5 cut(s)	242, 419, 646, 680, 2764
SduI	GDGCHC	3 cut(s)	249, 828, 2009
SfaNI	GCATC	4 cut(s)	1112, 2234, 2383, 2765
SfcI	CTRYAG	6 cut(s)	1269, 1718, 2319, 2442, 2691, 2747
Sfr274I	CTCGAG	2 cut(s)	203, 1525
SinI	GGWCC	6 cut(s)	14, 610, 2096, 2279, 2486, 2624
SlaI	CTCGAG	2 cut(s)	203, 1525
SmlI	CTYRAG	7 cut(s)	131, 203, 395, 893, 1312, 1525, 1781
SmoI	CTYRAG	7 cut(s)	131, 203, 395, 893, 1312, 1525, 1781
SphI	GCATGC	2 cut(s)	1717, 2537
SspI	AATATT	1 cut(s)	1429
SspMI	CTAG	4 cut(s)	836, 1071, 1880, 2064
StyD4I	CCNGG	5 cut(s)	240, 417, 644, 678, 2762
StyI	CCWWGG	5 cut(s)	120, 537, 1749, 2100, 2244
TaaI	ACNGT	6 cut(s)	769, 779, 883, 889, 1424, 2547
TaiI	ACGT	2 cut(s)	353, 2577
TaqI	TCGA	7 cut(s)	195, 204, 710, 848, 1526, 1873, 2228
TatI	WGTACW	4 cut(s)	459, 769, 1154, 2668
TauI	GCSGC	5 cut(s)	230, 455, 480, 483, 575
TfiI	GAWTC	5 cut(s)	21, 1025, 1130, 2590, 2769
Tru1I	TTAA	2 cut(s)	663, 1566
Tru9I	TTAA	2 cut(s)	663, 1566
TscAI	CASTG	2 cut(s)	892, 1545
TseFI	GTSAC	2 cut(s)	883, 2112
Tsp45I	GTSAC	2 cut(s)	883, 2112
TspDTI	ATGAA	6 cut(s)	1526, 1717, 2250, 2526, 2664, 2697
TspGWI	ACGGA	3 cut(s)	1530, 1641, 1938
TspRI	CASTG	2 cut(s)	892, 1545
Van91I	CCANNNNNTGG	1 cut(s)	1013
VpaK11BI	GGWCC	6 cut(s)	14, 610, 2096, 2279, 2486, 2624
VspI	ATTAAT	1 cut(s)	1566
XagI	CCTNNNNNAGG	1 cut(s)	683
XapI	RAATTY	4 cut(s)	1229, 1919, 1944, 2674
XceI	RCATGY	4 cut(s)	1717, 2029, 2537, 2789
XcmI	CCANNNNNNNNNTGG	3 cut(s)	445, 1756, 2712
XhoI	CTCGAG	2 cut(s)	203, 1525
XmiI	GTMKAC	2 cut(s)	1291, 2441
XmnI	GAANNNNTTC	3 cut(s)	1395, 1984, 2253
XspI	CTAG	4 cut(s)	836, 1071, 1880, 2064
ZraI	GACGTC	1 cut(s)	2575
ZrmI	AGTACT	3 cut(s)	461, 1156, 2670

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.