FvH4_3g39010
ERF Family

Belongs to the protein kinase superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0015235
Physical Location & Seq
Forward (+)
33243532 .. 33244998
1467 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g39010.t1

Sequence Viewer

Length: 1467 bp
ATGGAGAGGAATTCGAGTCAGTTCAGTCAATCCCACACGGCTTCCTGGATCAGAGGCAAGTGCGTAGGCCGCGGCGCGTTCGGGACGGTCAACATCGGAGTCAGCAAGTGCGACGGTGAAGTGTTCGCCGTGAAATCAGTCGACCTCGCCGCGTGTCTCCCCGGCCATGCGGAGGCGCTGGAGAACGAAATCCGGATTCTCCGGTCGCTGTCGTCACCCTACGTCGTGAAGTATCTCGACGACGATTTCACGGCGCCTTCGTGCCGGAACCTGCACATGGAGTATTTACCGGGCGGCACCGTTATGGACTCTGCTGCTGACATGGAGGAGAGTGTGGTGCAGTCGCGGACGTGGTGCGTGGTGTCGGCTCTGGAGTACGTACACTCCCGCGGGGTTGTTCACTGCGACGTGAAAGGGAGAAATGTTCTGGTGGGGCCCGTTCCGGGACAGGCGAAGTTATCAGACTTCGGTTCGGCCGTGGATTTGAATAAGGACGCGTGTAGGGGGAGGATTCTGCCACGTGGGAGCCCGCTGTGGATGGCGCCGGAGGTGATCAGCGGGGAGTATCAGGGGCCGGAGTCCGACGTGTGGTCGCTGGGGTGCACGGTGATCGAGATGGTCACGGGGAAGCCGGCGTGGGAGGACGAGGGGTTCGAGACGATGAGACGGATCGGGTTTTCGGGCGGGTTGCCGGAGTTTCCGACCCGGCTGTCCGAAACGGGTCGGGATTTTCTCGATAAGTGTCTGAGGAGGGACCCAAAGGAGCGGTGGAGCTGTGATCAGCTGCTGCGGCACCCGTTTCTGGCGTCGGTTGCGCCGAATGCTGCGGCGGATTCTTCGCCGCGGTGCGTGCTCGACTGGGTCAACTCGGAGTTCGAAGACGACGAAGACAGTTGTTCCATTCACGAGGTTTCCGCAAAGGAGCGGATTGGTAAATTGGCGACCAGCTCAGGGGCAGATTGGGAATTTCAAGAGGGTTGGACGGTGGTGCGGGGTTGCGGAGTAGAAGAAATGGAATCCGGCGCGTTTTCGCGGGAAGAGACGAGTTTGGGATATTCGGATTGCGAAGGGGCATTTTCGGGAAGTGAAAGTTGCGGTGGCGGTGAATTAGTGGAGTGGGCACGCAATGAGTGTGATACGGTTGGGCCAAGTGGTTGTTGGTATGGGCCGTCGGTGATGGAAGATTCGGCGGTGGGAGAGTGGAGCGTCGGCAAAAGAAGATCAAAGTCTTTATGTAATTTGTGTACAGACAGATTATTACTTTCATATTCTTTTGGGGTGGAAATGAATAAAGTACTGGGTTTTATGATGTGTTATATTGTTTTACCCTATGTTGTTTTTGCTTGGAGATATATAATAAAGTCGAAATATTATTTGATTTTTGGTGATGGGTGGGGACTCATAATTTTGTTTCTACTTTTGGTCCCAAAAGAGGATATCGTAGATAGCATTAAGCAAGTCTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000165 GO:0000186 GO:0000746 GO:0000747 GO:0000749 GO:0000750 GO:0000935 GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004709 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007186 GO:0008150 GO:0008152 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010514 GO:0010562 GO:0010564 GO:0010604 GO:0010646 GO:0010647 GO:0010941 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019236 GO:0019538 GO:0019953 GO:0022414 GO:0022603 GO:0023014 GO:0023051 GO:0023052 GO:0023056 GO:0030428 GO:0031098 GO:0031136 GO:0031137 GO:0031139 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032005 GO:0032147 GO:0032153 GO:0032155 GO:0032268 GO:0032270 GO:0033554 GO:0033674 GO:0034306 GO:0034307 GO:0035556 GO:0036211 GO:0042173 GO:0042221 GO:0042325 GO:0042327 GO:0042981 GO:0043067 GO:0043085 GO:0043170 GO:0043405 GO:0043406 GO:0043408 GO:0043410 GO:0043412 GO:0043549 GO:0043900 GO:0043902 GO:0043937 GO:0043940 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0044703 GO:0044764 GO:0045595 GO:0045859 GO:0045860 GO:0045937 GO:0046999 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051286 GO:0051338 GO:0051347 GO:0051445 GO:0051704 GO:0051716 GO:0051726 GO:0060255 GO:0060284 GO:0065007 GO:0065009 GO:0070887 GO:0071310 GO:0071444 GO:0071507 GO:0071704 GO:0071900 GO:0071902 GO:0071944 GO:0080090 GO:0140096 GO:1901564 GO:1902531 GO:1902533 GO:2000241 GO:2000243
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase

Protein Analysis

489

Amino Acids

53.77

Weight (kDa)

4.85

Isoelectric Point (pI)

49.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 19 - 268 5.1e-55 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 20 - 264 2e-27 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015235)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07150 AT1G07150 AT2G30040
fragaria_vesca FvH4_3g39010
malus_domestica MD03G1065400.v1.1 MD11G1070200.v1.1
prunus_persica Prupe.6G054400_v2.0.a1
rosa_chinensis RchiOBHm_Chr5g0070321
rosa_laevigata RLG00000036124
rosa_multiflora Rmu_co8495105.1_g000001 Rmu_sc0009590.1_g000003
rosa_rugosa Rorug05G0404900
rosa_samantha Rh5AG460500 Rh5BG478800 Rh5CG503000
rosa_wichuraiana Rw5G042920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 709
Acc36I ACCTGC 1 cut(s) 279
AccB1I GGYRCC 4 cut(s) 253, 296, 541, 792
AccBSI CCGCTC 2 cut(s) 766, 925
AccI GTMKAC 1 cut(s) 141
AccII CGCG 9 cut(s) 72, 77, 152, 346, 390, 497, 844, 1025, 1033
AccIII TCCGGA 1 cut(s) 192
AclWI GGATC 2 cut(s) 56, 677
AcoI YGGCCR 2 cut(s) 163, 474
AcsI RAATTY 2 cut(s) 10, 965
AcvI CACGTG 1 cut(s) 521
AcyI GRCGYC 3 cut(s) 254, 542, 806
AfaI GTAC 4 cut(s) 377, 381, 1246, 1296
AfiI CCNNNNNNNGG 7 cut(s) 172, 277, 443, 588, 802, 951, 1432
AflIII ACRYGT 2 cut(s) 495, 585
AgsI TTSAA 2 cut(s) 487, 971
AhdI GACNNNNNGTC 1 cut(s) 589
AjiI CACGTC 3 cut(s) 351, 409, 586
AjnI CCWGG 1 cut(s) 44
AloI GAACNNNNNNTCC 2 cut(s) 635, 667
AluBI AGCT 3 cut(s) 774, 784, 948
AluI AGCT 3 cut(s) 774, 784, 948
Alw21I GWGCWC 2 cut(s) 605, 855
Alw26I GTCTC 4 cut(s) 161, 650, 658, 1034
Alw44I GTGCAC 1 cut(s) 601
AlwI GGATC 2 cut(s) 56, 677
AlwNI CAGNNNCTG 1 cut(s) 787
Aor13HI TCCGGA 1 cut(s) 192
AoxI GGCC 7 cut(s) 67, 163, 434, 474, 572, 1145, 1166
ApaI GGGCCC 1 cut(s) 438
ApaLI GTGCAC 1 cut(s) 601
ApeKI GCWGC 4 cut(s) 314, 784, 787, 824
ApoI RAATTY 2 cut(s) 10, 965
ArsI GACNNNNNNTTYG 2 cut(s) 635, 667
AspLEI GCGC 6 cut(s) 77, 178, 256, 544, 817, 1025
AspS9I GGNCC 7 cut(s) 434, 435, 572, 754, 1145, 1166, 1423
AsuC2I CCSGG 4 cut(s) 162, 291, 444, 706
AsuHPI GGTGA 7 cut(s) 128, 207, 562, 619, 1115, 1186, 1397
AsuII TTCGAA 1 cut(s) 876
AvaII GGWCC 2 cut(s) 754, 1423
BaeGI GKGCMC 3 cut(s) 438, 605, 1123
BanI GGYRCC 4 cut(s) 253, 296, 541, 792
BanII GRGCYC 2 cut(s) 438, 530
BauI CACGAG 1 cut(s) 905
BbrPI CACGTG 1 cut(s) 521
BbsI GAAGAC 2 cut(s) 885, 894
Bbv12I GWGCWC 2 cut(s) 605, 855
BbvI GCAGC 4 cut(s) 301, 771, 774, 811
BccI CCATC 4 cut(s) 532, 610, 1171, 1382
BceAI ACGGC 5 cut(s) 54, 113, 267, 461, 1153
BcgI CGANNNNNNTGC 2 cut(s) 592, 626
BciT130I CCWGG 1 cut(s) 46
BclI TGATCA 2 cut(s) 552, 778
BcnI CCSGG 4 cut(s) 162, 291, 444, 706
BcoDI GTCTC 4 cut(s) 161, 650, 658, 1034
BfoI RGCGCY 3 cut(s) 179, 257, 545
BfuAI ACCTGC 1 cut(s) 279
BmcAI AGTACT 1 cut(s) 1296
Bme1390I CCNGG 5 cut(s) 46, 162, 291, 444, 706
Bme18I GGWCC 2 cut(s) 754, 1423
BmeRI GACNNNNNGTC 1 cut(s) 589
BmgBI CACGTC 3 cut(s) 351, 409, 586
BmgT120I GGNCC 7 cut(s) 434, 435, 572, 754, 1145, 1166, 1423
BmrFI CCNGG 5 cut(s) 46, 162, 291, 444, 706
BmrI ACTGGG 2 cut(s) 868, 1307
BmuI ACTGGG 2 cut(s) 868, 1307
BpiI GAAGAC 2 cut(s) 885, 894
BpmI CTGGAG 2 cut(s) 200, 392
Bpu10I CCTNAGC 1 cut(s) 949
Bpu14I TTCGAA 1 cut(s) 876
BpuMI CCSGG 4 cut(s) 162, 291, 444, 706
BsaAI YACGTR 2 cut(s) 379, 521
BsaHI GRCGYC 3 cut(s) 254, 542, 806
BsaJI CCNNGG 5 cut(s) 70, 160, 388, 477, 842
BsaWI WCCGGW 2 cut(s) 192, 201
BsaXI ACNNNNNCTCC 2 cut(s) 368, 398
Bsc4I CCNNNNNNNGG 7 cut(s) 172, 277, 443, 588, 802, 951, 1432
Bse118I RCCGGY 1 cut(s) 631
Bse1I ACTGG 2 cut(s) 863, 1302
Bse3DI GCAATG 1 cut(s) 1132
BseAI TCCGGA 1 cut(s) 192
BseBI CCWGG 1 cut(s) 46
BseDI CCNNGG 5 cut(s) 70, 160, 388, 477, 842
BseGI GGATG 1 cut(s) 543
BseLI CCNNNNNNNGG 7 cut(s) 172, 277, 443, 588, 802, 951, 1432
BseMI GCAATG 1 cut(s) 1132
BseMII CTCAG 2 cut(s) 737, 963
BseNI ACTGG 2 cut(s) 863, 1302
BseRI GAGGAG 2 cut(s) 341, 763
BseSI GKGCMC 3 cut(s) 438, 605, 1123
BseX3I CGGCCG 1 cut(s) 474
BseXI GCAGC 4 cut(s) 301, 771, 774, 811
BseYI CCCAGC 1 cut(s) 595
BsgI GTGCAG 2 cut(s) 257, 359
Bsh1236I CGCG 9 cut(s) 72, 77, 152, 346, 390, 497, 844, 1025, 1033
Bsh1285I CGRYCG 2 cut(s) 206, 477
BshFI GGCC 7 cut(s) 69, 165, 436, 476, 574, 1147, 1168
BshNI GGYRCC 4 cut(s) 253, 296, 541, 792
BsiEI CGRYCG 2 cut(s) 206, 477
BsiHKAI GWGCWC 2 cut(s) 605, 855
BslFI GGGAC 5 cut(s) 97, 459, 767, 1409, 1410
BslI CCNNNNNNNGG 7 cut(s) 172, 277, 443, 588, 802, 951, 1432
BsmAI GTCTC 4 cut(s) 161, 650, 658, 1034
BsmBI CGTCTC 3 cut(s) 650, 658, 1034
BsmFI GGGAC 5 cut(s) 97, 459, 767, 1409, 1410
BsmI GAATGC 1 cut(s) 826
BsnI GGCC 7 cut(s) 69, 165, 436, 476, 574, 1147, 1168
Bsp119I TTCGAA 1 cut(s) 876
Bsp120I GGGCCC 1 cut(s) 434
Bsp1286I GDGCHC 5 cut(s) 438, 530, 605, 855, 1123
Bsp13I TCCGGA 1 cut(s) 192
Bsp1407I TGTACA 1 cut(s) 1244
Bsp143I GATC 6 cut(s) 48, 552, 609, 669, 778, 1220
BspANI GGCC 7 cut(s) 69, 165, 436, 476, 574, 1147, 1168
BspCNI CTCAG 2 cut(s) 738, 962
BspEI TCCGGA 1 cut(s) 192
BspFNI CGCG 9 cut(s) 72, 77, 152, 346, 390, 497, 844, 1025, 1033
BspMI ACCTGC 1 cut(s) 279
BspPI GGATC 2 cut(s) 56, 677
BspT104I TTCGAA 1 cut(s) 876
BspT107I GGYRCC 4 cut(s) 253, 296, 541, 792
BsrBI CCGCTC 2 cut(s) 766, 925
BsrDI GCAATG 1 cut(s) 1132
BsrFI RCCGGY 1 cut(s) 631
BsrGI TGTACA 1 cut(s) 1244
BsrI ACTGG 2 cut(s) 863, 1302
BssAI RCCGGY 1 cut(s) 631
BssECI CCNNGG 5 cut(s) 70, 160, 388, 477, 842
BssMI GATC 6 cut(s) 48, 552, 609, 669, 778, 1220
BssNI GRCGYC 3 cut(s) 254, 542, 806
BssSI CACGAG 1 cut(s) 905
Bst2BI CACGAG 1 cut(s) 905
Bst2UI CCWGG 1 cut(s) 46
Bst4CI ACNGT 7 cut(s) 88, 116, 301, 607, 893, 985, 1141
Bst6I CTCTTC 1 cut(s) 1032
BstACI GRCGYC 3 cut(s) 254, 542, 806
BstAUI TGTACA 1 cut(s) 1244
BstBAI YACGTR 2 cut(s) 379, 521
BstBI TTCGAA 1 cut(s) 876
BstC8I GCNNGC 4 cut(s) 530, 633, 851, 1123
BstDEI CTNAG 2 cut(s) 746, 949
BstDSI CCRYGG 4 cut(s) 70, 388, 477, 842
BstF5I GGATG 1 cut(s) 543
BstFNI CGCG 9 cut(s) 72, 77, 152, 346, 390, 497, 844, 1025, 1033
BstH2I RGCGCY 3 cut(s) 179, 257, 545
BstHHI GCGC 6 cut(s) 77, 178, 256, 544, 817, 1025
BstKTI GATC 6 cut(s) 51, 555, 612, 672, 781, 1223
BstMAI GTCTC 4 cut(s) 161, 650, 658, 1034
BstMBI GATC 6 cut(s) 48, 552, 609, 669, 778, 1220
BstMCI CGRYCG 2 cut(s) 206, 477
BstMWI GCNNNNNNNGC 5 cut(s) 69, 790, 812, 821, 850
BstNI CCWGG 1 cut(s) 46
BstSCI CCNGG 5 cut(s) 44, 160, 289, 442, 704
BstSLI GKGCMC 3 cut(s) 438, 605, 1123
BstSNI TACGTA 1 cut(s) 379
BstUI CGCG 9 cut(s) 72, 77, 152, 346, 390, 497, 844, 1025, 1033
BstV1I GCAGC 4 cut(s) 301, 771, 774, 811
BstV2I GAAGAC 2 cut(s) 885, 894
BstZI CGGCCG 1 cut(s) 474
BsuRI GGCC 7 cut(s) 69, 165, 436, 476, 574, 1147, 1168
BtgI CCRYGG 4 cut(s) 70, 388, 477, 842
BtrI CACGTC 3 cut(s) 351, 409, 586
BtsCI GGATG 1 cut(s) 543
BtsI GCAGTG 1 cut(s) 400
BtsIMutI CAGTG 1 cut(s) 400
BveI ACCTGC 1 cut(s) 279
Cac8I GCNNGC 4 cut(s) 530, 633, 851, 1123
CaiI CAGNNNCTG 1 cut(s) 787
CfoI GCGC 6 cut(s) 77, 178, 256, 544, 817, 1025
Cfr10I RCCGGY 1 cut(s) 631
Cfr13I GGNCC 7 cut(s) 434, 435, 572, 754, 1145, 1166, 1423
Cfr42I CCGCGG 3 cut(s) 73, 391, 845
CseI GACGC 3 cut(s) 503, 795, 1195
Csp6I GTAC 4 cut(s) 376, 380, 1245, 1295
CviAII CATG 3 cut(s) 167, 277, 322
CviQI GTAC 4 cut(s) 376, 380, 1245, 1295
DdeI CTNAG 2 cut(s) 746, 949
DinI GGCGCC 2 cut(s) 255, 543
DpnI GATC 6 cut(s) 50, 554, 611, 671, 780, 1222
DpnII GATC 6 cut(s) 48, 552, 609, 669, 778, 1220
DrdI GACNNNNNNGTC 1 cut(s) 709
DriI GACNNNNNGTC 1 cut(s) 589
DseDI GACNNNNNNGTC 1 cut(s) 709
EaeI YGGCCR 2 cut(s) 163, 474
EagI CGGCCG 1 cut(s) 474
Eam1104I CTCTTC 1 cut(s) 1032
Eam1105I GACNNNNNGTC 1 cut(s) 589
EarI CTCTTC 1 cut(s) 1032
EciI GGCGGA 1 cut(s) 845
EclXI CGGCCG 1 cut(s) 474
Eco105I TACGTA 1 cut(s) 379
Eco24I GRGCYC 2 cut(s) 438, 530
Eco32I GATATC 1 cut(s) 1438
Eco47I GGWCC 2 cut(s) 754, 1423
Eco52I CGGCCG 1 cut(s) 474
Eco72I CACGTG 1 cut(s) 521
EcoO109I RGGNCCY 2 cut(s) 434, 754
EcoRI GAATTC 1 cut(s) 10
EcoRII CCWGG 1 cut(s) 44
EcoRV GATATC 1 cut(s) 1438
EcoT38I GRGCYC 2 cut(s) 438, 530
EgeI GGCGCC 2 cut(s) 255, 543
EheI GGCGCC 2 cut(s) 255, 543
Esp3I CGTCTC 3 cut(s) 650, 658, 1034
FaeI CATG 3 cut(s) 170, 280, 325
FalI AAGNNNNNCTT 1 cut(s) 1445
FaqI GGGAC 5 cut(s) 97, 459, 767, 1409, 1410
FatI CATG 3 cut(s) 166, 276, 321
FauI CCCGC 7 cut(s) 383, 395, 537, 551, 677, 984, 1026
FbaI TGATCA 2 cut(s) 552, 778
FblI GTMKAC 1 cut(s) 141
FokI GGATG 1 cut(s) 550
FriOI GRGCYC 2 cut(s) 438, 530
GlaI GCGC 6 cut(s) 76, 177, 255, 543, 816, 1024
GsaI CCCAGC 1 cut(s) 599
GsuI CTGGAG 2 cut(s) 200, 392
HaeII RGCGCY 3 cut(s) 179, 257, 545
HaeIII GGCC 7 cut(s) 69, 165, 436, 476, 574, 1147, 1168
HgaI GACGC 3 cut(s) 503, 795, 1195
HhaI GCGC 6 cut(s) 77, 178, 256, 544, 817, 1025
Hin1I GRCGYC 3 cut(s) 254, 542, 806
Hin1II CATG 3 cut(s) 170, 280, 325
Hin6I GCGC 6 cut(s) 75, 176, 254, 542, 815, 1023
HinP1I GCGC 6 cut(s) 75, 176, 254, 542, 815, 1023
HincII GTYRAC 3 cut(s) 91, 142, 865
HindII GTYRAC 3 cut(s) 91, 142, 865
HphI GGTGA 7 cut(s) 128, 207, 562, 619, 1115, 1186, 1397
Hpy166II GTNNAC 7 cut(s) 91, 142, 382, 400, 603, 865, 1245
Hpy188I TCNGA 9 cut(s) 53, 98, 463, 583, 702, 715, 747, 871, 1060
Hpy8I GTNNAC 7 cut(s) 91, 142, 382, 400, 603, 865, 1245
HpyAV CCTTC 2 cut(s) 267, 1061
HpyCH4III ACNGT 7 cut(s) 88, 116, 301, 607, 893, 985, 1141
HpyCH4IV ACGT 6 cut(s) 222, 350, 378, 408, 520, 585
HpyCH4V TGCA 3 cut(s) 274, 340, 603
HpyF10VI GCNNNNNNNGC 5 cut(s) 69, 790, 812, 821, 850
HpyF3I CTNAG 2 cut(s) 746, 949
HpySE526I ACGT 6 cut(s) 222, 350, 378, 408, 520, 585
Hsp92I GRCGYC 3 cut(s) 254, 542, 806
Hsp92II CATG 3 cut(s) 170, 280, 325
HspAI GCGC 6 cut(s) 75, 176, 254, 542, 815, 1023
KasI GGCGCC 2 cut(s) 253, 541
KflI GGGWCCC 1 cut(s) 754
Kpn2I TCCGGA 1 cut(s) 192
KroI GCCGGC 1 cut(s) 631
KroNI GCCGGC 1 cut(s) 633
Ksp22I TGATCA 2 cut(s) 552, 778
KspI CCGCGG 3 cut(s) 73, 391, 845
Kzo9I GATC 6 cut(s) 48, 552, 609, 669, 778, 1220
LmnI GCTCC 5 cut(s) 525, 763, 771, 922, 1203
Lsp1109I GCAGC 4 cut(s) 301, 771, 774, 811
MaeII ACGT 6 cut(s) 222, 350, 378, 408, 520, 585
MaeIII GTNAC 2 cut(s) 213, 619
MalI GATC 6 cut(s) 50, 554, 611, 671, 780, 1222
MbiI CCGCTC 2 cut(s) 766, 925
MboI GATC 6 cut(s) 48, 552, 609, 669, 778, 1220
MboII GAAGA 7 cut(s) 828, 890, 899, 1019, 1049, 1193, 1230
MhlI GDGCHC 5 cut(s) 438, 530, 605, 855, 1123
MluCI AATT 6 cut(s) 10, 935, 965, 1106, 1237, 1404
MluI ACGCGT 1 cut(s) 495
Mly113I GGCGCC 2 cut(s) 254, 542
MlyI GAGTC 5 cut(s) 25, 108, 302, 587, 1392
MmeI TCCRAC 3 cut(s) 606, 725, 959
MroI TCCGGA 1 cut(s) 192
MroNI GCCGGC 1 cut(s) 631
MseI TTAA 1 cut(s) 1452
MslI CAYNNNNRTG 1 cut(s) 302
MspA1I CMGCKG 6 cut(s) 72, 390, 532, 558, 784, 844
MspR9I CCNGG 5 cut(s) 46, 162, 291, 444, 706
Mva1269I GAATGC 1 cut(s) 826
MvaI CCWGG 1 cut(s) 46
MvnI CGCG 9 cut(s) 72, 77, 152, 346, 390, 497, 844, 1025, 1033
MwoI GCNNNNNNNGC 5 cut(s) 69, 790, 812, 821, 850
NaeI GCCGGC 1 cut(s) 633
NarI GGCGCC 2 cut(s) 254, 542
NciI CCSGG 4 cut(s) 162, 291, 444, 706
NdeII GATC 6 cut(s) 48, 552, 609, 669, 778, 1220
NgoMIV GCCGGC 1 cut(s) 631
NlaIII CATG 3 cut(s) 170, 280, 325
NmuCI GTSAC 2 cut(s) 213, 619
NspV TTCGAA 1 cut(s) 876
PcsI WCGNNNNNNNCGW 5 cut(s) 257, 474, 651, 815, 882
PctI GAATGC 1 cut(s) 826
PdiI GCCGGC 1 cut(s) 633
PfeI GAWTC 5 cut(s) 196, 511, 833, 1016, 1184
PflFI GACNNNGTC 1 cut(s) 860
PfoI TCCNGGA 2 cut(s) 44, 442
PleI GAGTC 5 cut(s) 24, 107, 302, 586, 1392
PluTI GGCGCC 2 cut(s) 257, 545
PmaCI CACGTG 1 cut(s) 521
PmlI CACGTG 1 cut(s) 521
PpsI GAGTC 5 cut(s) 24, 107, 302, 586, 1392
Ppu21I YACGTR 2 cut(s) 379, 521
PpuMI RGGWCCY 1 cut(s) 754
Psp5II RGGWCCY 1 cut(s) 754
Psp6I CCWGG 1 cut(s) 44
PspCI CACGTG 1 cut(s) 521
PspFI CCCAGC 1 cut(s) 595
PspGI CCWGG 1 cut(s) 44
PspOMI GGGCCC 1 cut(s) 434
PspPI GGNCC 7 cut(s) 434, 435, 572, 754, 1145, 1166, 1423
PspPPI RGGWCCY 1 cut(s) 754
PstNI CAGNNNCTG 1 cut(s) 787
PsyI GACNNNGTC 1 cut(s) 860
PvuII CAGCTG 1 cut(s) 784
RsaI GTAC 4 cut(s) 377, 381, 1246, 1296
RsaNI GTAC 4 cut(s) 376, 380, 1245, 1295
RseI CAYNNNNRTG 1 cut(s) 302
SacII CCGCGG 3 cut(s) 73, 391, 845
SalI GTCGAC 1 cut(s) 140
SaqAI TTAA 1 cut(s) 1452
Sau3AI GATC 6 cut(s) 48, 552, 609, 669, 778, 1220
Sau96I GGNCC 7 cut(s) 434, 435, 572, 754, 1145, 1166, 1423
ScaI AGTACT 1 cut(s) 1296
SchI GAGTC 5 cut(s) 25, 108, 302, 587, 1392
ScrFI CCNGG 5 cut(s) 46, 162, 291, 444, 706
SduI GDGCHC 5 cut(s) 438, 530, 605, 855, 1123
SfoI GGCGCC 2 cut(s) 255, 543
Sfr303I CCGCGG 3 cut(s) 73, 391, 845
SfuI TTCGAA 1 cut(s) 876
SgrBI CCGCGG 3 cut(s) 73, 391, 845
SinI GGWCC 2 cut(s) 754, 1423
SmiMI CAYNNNNRTG 1 cut(s) 302
SnaBI TACGTA 1 cut(s) 379
Sse9I AATT 6 cut(s) 10, 935, 965, 1106, 1237, 1404
SspDI GGCGCC 2 cut(s) 253, 541
SspI AATATT 1 cut(s) 1370
StyD4I CCNGG 5 cut(s) 44, 160, 289, 442, 704
TaaI ACNGT 7 cut(s) 88, 116, 301, 607, 893, 985, 1141
TaiI ACGT 6 cut(s) 225, 353, 381, 411, 523, 588
TaqI TCGA 9 cut(s) 14, 141, 237, 612, 654, 735, 855, 876, 1364
TasI AATT 6 cut(s) 10, 935, 965, 1106, 1237, 1404
TatI WGTACW 2 cut(s) 1244, 1294
TauI GCSGC 7 cut(s) 72, 75, 152, 297, 793, 830, 844
TfiI GAWTC 5 cut(s) 196, 511, 833, 1016, 1184
Tru1I TTAA 1 cut(s) 1452
Tru9I TTAA 1 cut(s) 1452
TscAI CASTG 1 cut(s) 407
TseFI GTSAC 2 cut(s) 213, 619
TseI GCWGC 4 cut(s) 314, 784, 787, 824
Tsp45I GTSAC 2 cut(s) 213, 619
TspDTI ATGAA 2 cut(s) 1254, 1301
TspGWI ACGGA 1 cut(s) 682
TspRI CASTG 1 cut(s) 407
Tth111I GACNNNGTC 1 cut(s) 860
VneI GTGCAC 1 cut(s) 601
VpaK11BI GGWCC 2 cut(s) 754, 1423
XapI RAATTY 2 cut(s) 10, 965
XcmI CCANNNNNNNNNTGG 2 cut(s) 765, 1155
XmiI GTMKAC 1 cut(s) 141
ZrmI AGTACT 1 cut(s) 1296
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.