Clathrin is the major protein of the polyhedral coat of coated pits and vesicles
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G07150 AT1G07150 AT2G30040 |
| fragaria_vesca | FvH4_3g39010 |
| malus_domestica | MD03G1065400.v1.1 MD11G1070200.v1.1 |
| prunus_persica | Prupe.6G054400_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr5g0070321 |
| rosa_laevigata | RLG00000036124 |
| rosa_multiflora | Rmu_co8495105.1_g000001 Rmu_sc0009590.1_g000003 |
| rosa_rugosa | Rorug05G0404900 |
| rosa_samantha | Rh5AG460500 Rh5BG478800 Rh5CG503000 |
| rosa_wichuraiana | Rw5G042920 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 700, 2396 |
| AccB1I | GGYRCC | 4 cut(s) | 287, 532, 1259, 2009 |
| AccBSI | CCGCTC | 1 cut(s) | 931 |
| AccI | GTMKAC | 1 cut(s) | 1665 |
| AccII | CGCG | 6 cut(s) | 71, 146, 334, 449, 1028, 1036 |
| AccIII | TCCGGA | 3 cut(s) | 186, 2065, 2203 |
| AclWI | GGATC | 8 cut(s) | 50, 144, 668, 1247, 1548, 1754, 2201, 2214 |
| AcoI | YGGCCR | 3 cut(s) | 462, 1266, 1457 |
| AcsI | RAATTY | 3 cut(s) | 7, 971, 2504 |
| AcuI | CTGAAG | 2 cut(s) | 2247, 2406 |
| AcvI | CACGTG | 1 cut(s) | 512 |
| AcyI | GRCGYC | 4 cut(s) | 248, 533, 797, 1260 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 103, 160, 166, 579, 793, 1256, 1322 |
| AflIII | ACRYGT | 1 cut(s) | 576 |
| AgsI | TTSAA | 5 cut(s) | 1565, 1880, 1935, 2597, 2678 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 580, 1687 |
| AjiI | CACGTC | 4 cut(s) | 310, 339, 397, 577 |
| AjnI | CCWGG | 6 cut(s) | 159, 435, 1255, 1798, 2017, 2377 |
| Alw21I | GWGCWC | 2 cut(s) | 596, 846 |
| Alw26I | GTCTC | 6 cut(s) | 155, 641, 738, 1037, 1388, 2162 |
| Alw44I | GTGCAC | 1 cut(s) | 592 |
| AlwI | GGATC | 8 cut(s) | 50, 144, 668, 1247, 1548, 1754, 2201, 2214 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 778, 2177 |
| Ama87I | CYCGRG | 3 cut(s) | 173, 375, 566 |
| Aor13HI | TCCGGA | 3 cut(s) | 186, 2065, 2203 |
| AoxI | GGCC | 8 cut(s) | 422, 462, 563, 945, 1169, 1266, 1457, 1814 |
| ApaI | GGGCCC | 2 cut(s) | 426, 567 |
| ApaLI | GTGCAC | 1 cut(s) | 592 |
| ApoI | RAATTY | 3 cut(s) | 7, 971, 2504 |
| AseI | ATTAAT | 1 cut(s) | 1329 |
| AspLEI | GCGC | 6 cut(s) | 71, 172, 535, 1004, 1028, 1262 |
| AspS9I | GGNCC | 7 cut(s) | 422, 423, 433, 563, 564, 1169, 1232 |
| AsuC2I | CCSGG | 7 cut(s) | 282, 295, 376, 377, 426, 697, 749 |
| AsuHPI | GGTGA | 6 cut(s) | 122, 553, 610, 1100, 1118, 1189 |
| AsuII | TTCGAA | 2 cut(s) | 867, 1243 |
| AsuNHI | GCTAGC | 1 cut(s) | 2659 |
| AvaI | CYCGRG | 3 cut(s) | 173, 375, 566 |
| AvaII | GGWCC | 2 cut(s) | 433, 1232 |
| BaeGI | GKGCMC | 5 cut(s) | 426, 567, 596, 1126, 2014 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2292, 2325 |
| BamHI | GGATCC | 1 cut(s) | 2206 |
| BanI | GGYRCC | 4 cut(s) | 287, 532, 1259, 2009 |
| BanII | GRGCYC | 2 cut(s) | 426, 567 |
| BauI | CACGAG | 1 cut(s) | 911 |
| BbrPI | CACGTG | 1 cut(s) | 512 |
| BbsI | GAAGAC | 2 cut(s) | 876, 2394 |
| Bbv12I | GWGCWC | 2 cut(s) | 596, 846 |
| BccI | CCATC | 6 cut(s) | 523, 601, 1174, 1243, 1639, 2035 |
| BceAI | ACGGC | 7 cut(s) | 48, 107, 261, 449, 1156, 1432, 1472 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 583, 617, 1402, 1436 |
| BciT130I | CCWGG | 6 cut(s) | 161, 437, 1257, 1800, 2019, 2379 |
| BcnI | CCSGG | 7 cut(s) | 282, 295, 376, 377, 426, 697, 749 |
| BcoDI | GTCTC | 6 cut(s) | 155, 641, 738, 1037, 1388, 2162 |
| BfaI | CTAG | 4 cut(s) | 1317, 2165, 2660, 2693 |
| BfmI | CTRYAG | 5 cut(s) | 16, 779, 2178, 2445, 2457 |
| BfoI | RGCGCY | 3 cut(s) | 173, 536, 1263 |
| BglII | AGATCT | 2 cut(s) | 2050, 2698 |
| BlpI | GCTNAGC | 1 cut(s) | 653 |
| BmcAI | AGTACT | 3 cut(s) | 275, 2478, 2555 |
| Bme18I | GGWCC | 2 cut(s) | 433, 1232 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 580, 1687 |
| BmeT110I | CYCGRG | 3 cut(s) | 173, 375, 566 |
| BmgBI | CACGTC | 4 cut(s) | 310, 339, 397, 577 |
| BmgT120I | GGNCC | 7 cut(s) | 422, 423, 433, 563, 564, 1169, 1232 |
| BmrI | ACTGGG | 1 cut(s) | 859 |
| BmsI | GCATC | 4 cut(s) | 1422, 1584, 1626, 1901 |
| BmtI | GCTAGC | 1 cut(s) | 2663 |
| BmuI | ACTGGG | 1 cut(s) | 859 |
| BoxI | GACNNNNGTC | 1 cut(s) | 732 |
| BpiI | GAAGAC | 2 cut(s) | 876, 2394 |
| Bpu10I | CCTNAGC | 2 cut(s) | 924, 1599 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 653 |
| Bpu14I | TTCGAA | 2 cut(s) | 867, 1243 |
| BpuEI | CTTGAG | 3 cut(s) | 344, 1135, 1503 |
| BpuMI | CCSGG | 7 cut(s) | 282, 295, 376, 377, 426, 697, 749 |
| BsaAI | YACGTR | 2 cut(s) | 512, 1127 |
| BsaHI | GRCGYC | 4 cut(s) | 248, 533, 797, 1260 |
| BsaI | GGTCTC | 2 cut(s) | 738, 1388 |
| BsaJI | CCNNGG | 7 cut(s) | 132, 294, 375, 376, 465, 833, 1263 |
| BsaWI | WCCGGW | 3 cut(s) | 186, 2065, 2203 |
| BsaXI | ACNNNNNCTCC | 3 cut(s) | 743, 773, 2688 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 103, 160, 166, 579, 793, 1256, 1322 |
| Bse118I | RCCGGY | 1 cut(s) | 622 |
| Bse1I | ACTGG | 3 cut(s) | 854, 1676, 1827 |
| BseAI | TCCGGA | 3 cut(s) | 186, 2065, 2203 |
| BseBI | CCWGG | 6 cut(s) | 161, 437, 1257, 1800, 2019, 2379 |
| BseDI | CCNNGG | 7 cut(s) | 132, 294, 375, 376, 465, 833, 1263 |
| BseGI | GGATG | 3 cut(s) | 534, 1235, 1650 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 103, 160, 166, 579, 793, 1256, 1322 |
| BseNI | ACTGG | 3 cut(s) | 854, 1676, 1827 |
| BseRI | GAGGAG | 3 cut(s) | 196, 754, 767 |
| BseSI | GKGCMC | 5 cut(s) | 426, 567, 596, 1126, 2014 |
| BseX3I | CGGCCG | 2 cut(s) | 462, 1457 |
| BseYI | CCCAGC | 4 cut(s) | 155, 1639, 2013, 2528 |
| BsgI | GTGCAG | 1 cut(s) | 1183 |
| Bsh1236I | CGCG | 6 cut(s) | 71, 146, 334, 449, 1028, 1036 |
| Bsh1285I | CGRYCG | 3 cut(s) | 200, 465, 1460 |
| BshFI | GGCC | 8 cut(s) | 424, 464, 565, 947, 1171, 1268, 1459, 1816 |
| BshNI | GGYRCC | 4 cut(s) | 287, 532, 1259, 2009 |
| BsiEI | CGRYCG | 3 cut(s) | 200, 465, 1460 |
| BsiHKAI | GWGCWC | 2 cut(s) | 596, 846 |
| BsiHKCI | CYCGRG | 3 cut(s) | 173, 375, 566 |
| BslFI | GGGAC | 2 cut(s) | 311, 2355 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 103, 160, 166, 579, 793, 1256, 1322 |
| BsmAI | GTCTC | 6 cut(s) | 155, 641, 738, 1037, 1388, 2162 |
| BsmBI | CGTCTC | 2 cut(s) | 641, 1037 |
| BsmFI | GGGAC | 2 cut(s) | 311, 2355 |
| BsnI | GGCC | 8 cut(s) | 424, 464, 565, 947, 1171, 1268, 1459, 1816 |
| Bso31I | GGTCTC | 2 cut(s) | 738, 1388 |
| BsoBI | CYCGRG | 3 cut(s) | 173, 375, 566 |
| Bsp119I | TTCGAA | 2 cut(s) | 867, 1243 |
| Bsp120I | GGGCCC | 2 cut(s) | 422, 563 |
| Bsp1286I | GDGCHC | 6 cut(s) | 426, 567, 596, 846, 1126, 2014 |
| Bsp13I | TCCGGA | 3 cut(s) | 186, 2065, 2203 |
| Bsp1407I | TGTACA | 2 cut(s) | 325, 367 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 653 |
| Bsp19I | CCATGG | 1 cut(s) | 1263 |
| BspANI | GGCC | 8 cut(s) | 424, 464, 565, 947, 1171, 1268, 1459, 1816 |
| BspEI | TCCGGA | 3 cut(s) | 186, 2065, 2203 |
| BspFNI | CGCG | 6 cut(s) | 71, 146, 334, 449, 1028, 1036 |
| BspMAI | CTGCAG | 4 cut(s) | 783, 2182, 2449, 2461 |
| BspOI | GCTAGC | 1 cut(s) | 2663 |
| BspPI | GGATC | 8 cut(s) | 50, 144, 668, 1247, 1548, 1754, 2201, 2214 |
| BspQI | GCTCTTC | 1 cut(s) | 2682 |
| BspT104I | TTCGAA | 2 cut(s) | 867, 1243 |
| BspT107I | GGYRCC | 4 cut(s) | 287, 532, 1259, 2009 |
| BspTNI | GGTCTC | 2 cut(s) | 738, 1388 |
| BsrBI | CCGCTC | 1 cut(s) | 931 |
| BsrFI | RCCGGY | 1 cut(s) | 622 |
| BsrGI | TGTACA | 2 cut(s) | 325, 367 |
| BsrI | ACTGG | 3 cut(s) | 854, 1676, 1827 |
| BssAI | RCCGGY | 1 cut(s) | 622 |
| BssECI | CCNNGG | 7 cut(s) | 132, 294, 375, 376, 465, 833, 1263 |
| BssNAI | GTATAC | 1 cut(s) | 1666 |
| BssNI | GRCGYC | 4 cut(s) | 248, 533, 797, 1260 |
| BssSI | CACGAG | 1 cut(s) | 911 |
| BssT1I | CCWWGG | 1 cut(s) | 1263 |
| Bst1107I | GTATAC | 1 cut(s) | 1666 |
| Bst2BI | CACGAG | 1 cut(s) | 911 |
| Bst2UI | CCWGG | 6 cut(s) | 161, 437, 1257, 1800, 2019, 2379 |
| Bst6I | CTCTTC | 4 cut(s) | 888, 1035, 2359, 2682 |
| BstACI | GRCGYC | 4 cut(s) | 248, 533, 797, 1260 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 1450, 1889, 1898, 2453 |
| BstAUI | TGTACA | 2 cut(s) | 325, 367 |
| BstBAI | YACGTR | 2 cut(s) | 512, 1127 |
| BstBI | TTCGAA | 2 cut(s) | 867, 1243 |
| BstC8I | GCNNGC | 7 cut(s) | 447, 521, 842, 2046, 2454, 2526, 2661 |
| BstDSI | CCRYGG | 3 cut(s) | 132, 465, 1263 |
| BstF5I | GGATG | 3 cut(s) | 534, 1235, 1650 |
| BstFNI | CGCG | 6 cut(s) | 71, 146, 334, 449, 1028, 1036 |
| BstH2I | RGCGCY | 3 cut(s) | 173, 536, 1263 |
| BstHHI | GCGC | 6 cut(s) | 71, 172, 535, 1004, 1028, 1262 |
| BstMAI | GTCTC | 6 cut(s) | 155, 641, 738, 1037, 1388, 2162 |
| BstMCI | CGRYCG | 3 cut(s) | 200, 465, 1460 |
| BstNI | CCWGG | 6 cut(s) | 161, 437, 1257, 1800, 2019, 2379 |
| BstNSI | RCATGY | 5 cut(s) | 1358, 1438, 1840, 1889, 1997 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 732 |
| BstSFI | CTRYAG | 5 cut(s) | 16, 779, 2178, 2445, 2457 |
| BstSLI | GKGCMC | 5 cut(s) | 426, 567, 596, 1126, 2014 |
| BstUI | CGCG | 6 cut(s) | 71, 146, 334, 449, 1028, 1036 |
| BstV2I | GAAGAC | 2 cut(s) | 876, 2394 |
| BstX2I | RGATCY | 4 cut(s) | 136, 2050, 2206, 2698 |
| BstYI | RGATCY | 4 cut(s) | 136, 2050, 2206, 2698 |
| BstZ17I | GTATAC | 1 cut(s) | 1666 |
| BstZI | CGGCCG | 2 cut(s) | 462, 1457 |
| BsuRI | GGCC | 8 cut(s) | 424, 464, 565, 947, 1171, 1268, 1459, 1816 |
| BtgI | CCRYGG | 3 cut(s) | 132, 465, 1263 |
| BtrI | CACGTC | 4 cut(s) | 310, 339, 397, 577 |
| BtsCI | GGATG | 3 cut(s) | 534, 1235, 1650 |
| BtsI | GCAGTG | 1 cut(s) | 388 |
| BtsIMutI | CAGTG | 3 cut(s) | 388, 1669, 2286 |
| Cac8I | GCNNGC | 7 cut(s) | 447, 521, 842, 2046, 2454, 2526, 2661 |
| CaiI | CAGNNNCTG | 2 cut(s) | 778, 2177 |
| CfoI | GCGC | 6 cut(s) | 71, 172, 535, 1004, 1028, 1262 |
| Cfr10I | RCCGGY | 1 cut(s) | 622 |
| Cfr13I | GGNCC | 7 cut(s) | 422, 423, 433, 563, 564, 1169, 1232 |
| Cfr9I | CCCGGG | 1 cut(s) | 375 |
| CseI | GACGC | 3 cut(s) | 237, 658, 786 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 2248, 2283, 2529, 2564 |
| DinI | GGCGCC | 2 cut(s) | 534, 1261 |
| DraI | TTTAAA | 1 cut(s) | 1909 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 700, 2396 |
| DriI | GACNNNNNGTC | 2 cut(s) | 580, 1687 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 700, 2396 |
| EaeI | YGGCCR | 3 cut(s) | 462, 1266, 1457 |
| EagI | CGGCCG | 2 cut(s) | 462, 1457 |
| Eam1104I | CTCTTC | 4 cut(s) | 888, 1035, 2359, 2682 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 580, 1687 |
| EarI | CTCTTC | 4 cut(s) | 888, 1035, 2359, 2682 |
| EciI | GGCGGA | 3 cut(s) | 179, 497, 836 |
| EclXI | CGGCCG | 2 cut(s) | 462, 1457 |
| Eco130I | CCWWGG | 1 cut(s) | 1263 |
| Eco24I | GRGCYC | 2 cut(s) | 426, 567 |
| Eco31I | GGTCTC | 2 cut(s) | 738, 1388 |
| Eco32I | GATATC | 1 cut(s) | 2103 |
| Eco47I | GGWCC | 2 cut(s) | 433, 1232 |
| Eco52I | CGGCCG | 2 cut(s) | 462, 1457 |
| Eco57I | CTGAAG | 2 cut(s) | 2247, 2406 |
| Eco72I | CACGTG | 1 cut(s) | 512 |
| Eco88I | CYCGRG | 3 cut(s) | 173, 375, 566 |
| EcoO109I | RGGNCCY | 2 cut(s) | 422, 563 |
| EcoRI | GAATTC | 1 cut(s) | 7 |
| EcoRII | CCWGG | 6 cut(s) | 159, 435, 1255, 1798, 2017, 2377 |
| EcoRV | GATATC | 1 cut(s) | 2103 |
| EcoT14I | CCWWGG | 1 cut(s) | 1263 |
| EcoT38I | GRGCYC | 2 cut(s) | 426, 567 |
| EgeI | GGCGCC | 2 cut(s) | 534, 1261 |
| EheI | GGCGCC | 2 cut(s) | 534, 1261 |
| ErhI | CCWWGG | 1 cut(s) | 1263 |
| Esp3I | CGTCTC | 2 cut(s) | 641, 1037 |
| FaqI | GGGAC | 2 cut(s) | 311, 2355 |
| FauI | CCCGC | 5 cut(s) | 528, 542, 668, 990, 1029 |
| FauNDI | CATATG | 1 cut(s) | 267 |
| FblI | GTMKAC | 1 cut(s) | 1665 |
| FokI | GGATG | 3 cut(s) | 541, 1222, 1657 |
| FriOI | GRGCYC | 2 cut(s) | 426, 567 |
| FspBI | CTAG | 4 cut(s) | 1317, 2165, 2660, 2693 |
| GlaI | GCGC | 6 cut(s) | 70, 171, 534, 1003, 1027, 1261 |
| GsaI | CCCAGC | 4 cut(s) | 159, 1643, 2017, 2532 |
| HaeII | RGCGCY | 3 cut(s) | 173, 536, 1263 |
| HaeIII | GGCC | 8 cut(s) | 424, 464, 565, 947, 1171, 1268, 1459, 1816 |
| HgaI | GACGC | 3 cut(s) | 237, 658, 786 |
| HhaI | GCGC | 6 cut(s) | 71, 172, 535, 1004, 1028, 1262 |
| Hin1I | GRCGYC | 4 cut(s) | 248, 533, 797, 1260 |
| Hin6I | GCGC | 6 cut(s) | 69, 170, 533, 1002, 1026, 1260 |
| HinP1I | GCGC | 6 cut(s) | 69, 170, 533, 1002, 1026, 1260 |
| HincII | GTYRAC | 4 cut(s) | 856, 1426, 2260, 2571 |
| HindII | GTYRAC | 4 cut(s) | 856, 1426, 2260, 2571 |
| HindIII | AAGCTT | 3 cut(s) | 2138, 2229, 2672 |
| HpaI | GTTAAC | 1 cut(s) | 2571 |
| HphI | GGTGA | 6 cut(s) | 122, 553, 610, 1100, 1118, 1189 |
| Hpy99I | CGWCG | 9 cut(s) | 221, 239, 253, 398, 578, 878, 893, 1177, 1458 |
| HpyAV | CCTTC | 5 cut(s) | 1064, 1079, 1250, 1941, 2701 |
| Hsp92I | GRCGYC | 4 cut(s) | 248, 533, 797, 1260 |
| HspAI | GCGC | 6 cut(s) | 69, 170, 533, 1002, 1026, 1260 |
| KasI | GGCGCC | 2 cut(s) | 532, 1259 |
| Kpn2I | TCCGGA | 3 cut(s) | 186, 2065, 2203 |
| KspAI | GTTAAC | 1 cut(s) | 2571 |
| LguI | GCTCTTC | 1 cut(s) | 2682 |
| LmnI | GCTCC | 4 cut(s) | 762, 928, 1801, 1855 |
| LweI | GCATC | 4 cut(s) | 1422, 1584, 1626, 1901 |
| MaeI | CTAG | 4 cut(s) | 1317, 2165, 2660, 2693 |
| MaeIII | GTNAC | 7 cut(s) | 610, 1357, 1624, 1648, 1978, 2277, 2610 |
| MbiI | CCGCTC | 1 cut(s) | 931 |
| MboII | GAAGA | 9 cut(s) | 819, 881, 905, 1052, 1588, 2366, 2376, 2399, 2699 |
| MfeI | CAATTG | 1 cut(s) | 2304 |
| MflI | RGATCY | 4 cut(s) | 136, 2050, 2206, 2698 |
| MhlI | GDGCHC | 6 cut(s) | 426, 567, 596, 846, 1126, 2014 |
| Mly113I | GGCGCC | 2 cut(s) | 533, 1260 |
| MlyI | GAGTC | 5 cut(s) | 102, 293, 578, 1697, 2337 |
| MmeI | TCCRAC | 4 cut(s) | 597, 716, 1989, 2221 |
| MroI | TCCGGA | 3 cut(s) | 186, 2065, 2203 |
| MseI | TTAA | 9 cut(s) | 1329, 1512, 1557, 1676, 1784, 1827, 1908, 2330, 2570 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1292, 1433, 1439 |
| MspA1I | CMGCKG | 4 cut(s) | 523, 1274, 2225, 2404 |
| MunI | CAATTG | 1 cut(s) | 2304 |
| MvaI | CCWGG | 6 cut(s) | 161, 437, 1257, 1800, 2019, 2379 |
| MvnI | CGCG | 6 cut(s) | 71, 146, 334, 449, 1028, 1036 |
| NarI | GGCGCC | 2 cut(s) | 533, 1260 |
| NciI | CCSGG | 7 cut(s) | 282, 295, 376, 377, 426, 697, 749 |
| NcoI | CCATGG | 1 cut(s) | 1263 |
| NdeI | CATATG | 1 cut(s) | 267 |
| NheI | GCTAGC | 1 cut(s) | 2659 |
| NmuCI | GTSAC | 5 cut(s) | 610, 1357, 1624, 1648, 2610 |
| NspI | RCATGY | 5 cut(s) | 1358, 1438, 1840, 1889, 1997 |
| NspV | TTCGAA | 2 cut(s) | 867, 1243 |
| PaeR7I | CTCGAG | 1 cut(s) | 173 |
| PciSI | GCTCTTC | 1 cut(s) | 2682 |
| PcsI | WCGNNNNNNNCGW | 5 cut(s) | 437, 462, 873, 879, 888 |
| PflFI | GACNNNGTC | 1 cut(s) | 851 |
| PleI | GAGTC | 5 cut(s) | 101, 293, 577, 1696, 2337 |
| PluTI | GGCGCC | 2 cut(s) | 536, 1263 |
| PmaCI | CACGTG | 1 cut(s) | 512 |
| PmlI | CACGTG | 1 cut(s) | 512 |
| PpsI | GAGTC | 5 cut(s) | 101, 293, 577, 1696, 2337 |
| Ppu21I | YACGTR | 2 cut(s) | 512, 1127 |
| PshAI | GACNNNNGTC | 1 cut(s) | 732 |
| PshBI | ATTAAT | 1 cut(s) | 1329 |
| Psp6I | CCWGG | 6 cut(s) | 159, 435, 1255, 1798, 2017, 2377 |
| PspCI | CACGTG | 1 cut(s) | 512 |
| PspFI | CCCAGC | 4 cut(s) | 155, 1639, 2013, 2528 |
| PspGI | CCWGG | 6 cut(s) | 159, 435, 1255, 1798, 2017, 2377 |
| PspOMI | GGGCCC | 2 cut(s) | 422, 563 |
| PspPI | GGNCC | 7 cut(s) | 422, 423, 433, 563, 564, 1169, 1232 |
| PstI | CTGCAG | 4 cut(s) | 783, 2182, 2449, 2461 |
| PstNI | CAGNNNCTG | 2 cut(s) | 778, 2177 |
| PsuI | RGATCY | 4 cut(s) | 136, 2050, 2206, 2698 |
| PsyI | GACNNNGTC | 1 cut(s) | 851 |
| PvuII | CAGCTG | 1 cut(s) | 2225 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1292, 1433, 1439 |
| SapI | GCTCTTC | 1 cut(s) | 2682 |
| SaqAI | TTAA | 9 cut(s) | 1329, 1512, 1557, 1676, 1784, 1827, 1908, 2330, 2570 |
| Sau96I | GGNCC | 7 cut(s) | 422, 423, 433, 563, 564, 1169, 1232 |
| ScaI | AGTACT | 3 cut(s) | 275, 2478, 2555 |
| SchI | GAGTC | 5 cut(s) | 102, 293, 578, 1697, 2337 |
| SduI | GDGCHC | 6 cut(s) | 426, 567, 596, 846, 1126, 2014 |
| SfaNI | GCATC | 4 cut(s) | 1422, 1584, 1626, 1901 |
| SfcI | CTRYAG | 5 cut(s) | 16, 779, 2178, 2445, 2457 |
| SfoI | GGCGCC | 2 cut(s) | 534, 1261 |
| Sfr274I | CTCGAG | 1 cut(s) | 173 |
| SfuI | TTCGAA | 2 cut(s) | 867, 1243 |
| SinI | GGWCC | 2 cut(s) | 433, 1232 |
| SlaI | CTCGAG | 1 cut(s) | 173 |
| SmaI | CCCGGG | 1 cut(s) | 377 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1292, 1433, 1439 |
| SmlI | CTYRAG | 4 cut(s) | 173, 359, 1150, 1518 |
| SmoI | CTYRAG | 4 cut(s) | 173, 359, 1150, 1518 |
| SspDI | GGCGCC | 2 cut(s) | 532, 1259 |
| SspI | AATATT | 1 cut(s) | 1187 |
| SspMI | CTAG | 4 cut(s) | 1317, 2165, 2660, 2693 |
| StyI | CCWWGG | 1 cut(s) | 1263 |
| TaqI | TCGA | 8 cut(s) | 174, 603, 846, 867, 950, 1243, 1496, 2194 |
| TaqII | GACCGA | 1 cut(s) | 1220 |
| TatI | WGTACW | 6 cut(s) | 273, 325, 367, 1377, 2476, 2553 |
| TauI | GCSGC | 7 cut(s) | 146, 288, 818, 821, 1271, 1274, 1405 |
| Tru1I | TTAA | 9 cut(s) | 1329, 1512, 1557, 1676, 1784, 1827, 1908, 2330, 2570 |
| Tru9I | TTAA | 9 cut(s) | 1329, 1512, 1557, 1676, 1784, 1827, 1908, 2330, 2570 |
| TscAI | CASTG | 3 cut(s) | 395, 1676, 2293 |
| TseFI | GTSAC | 5 cut(s) | 610, 1357, 1624, 1648, 2610 |
| Tsp45I | GTSAC | 5 cut(s) | 610, 1357, 1624, 1648, 2610 |
| TspDTI | ATGAA | 8 cut(s) | 27, 1310, 1330, 1445, 1499, 1595, 2223, 2310 |
| TspGWI | ACGGA | 2 cut(s) | 121, 2471 |
| TspMI | CCCGGG | 1 cut(s) | 375 |
| TspRI | CASTG | 3 cut(s) | 395, 1676, 2293 |
| Tth111I | GACNNNGTC | 1 cut(s) | 851 |
| VneI | GTGCAC | 1 cut(s) | 592 |
| VpaK11BI | GGWCC | 2 cut(s) | 433, 1232 |
| VspI | ATTAAT | 1 cut(s) | 1329 |
| XapI | RAATTY | 3 cut(s) | 7, 971, 2504 |
| XceI | RCATGY | 5 cut(s) | 1358, 1438, 1840, 1889, 1997 |
| XhoI | CTCGAG | 1 cut(s) | 173 |
| XmaI | CCCGGG | 1 cut(s) | 375 |
| XmiI | GTMKAC | 1 cut(s) | 1665 |
| XspI | CTAG | 4 cut(s) | 1317, 2165, 2660, 2693 |
| ZrmI | AGTACT | 3 cut(s) | 275, 2478, 2555 |