Rh5CG503000
ERF Family

Belongs to the protein kinase superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0015235
Physical Location & Seq
Forward (+)
69876413 .. 69878460
2048 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG503000.1

Sequence Viewer

Length: 1395 bp
ATGGAGAATTCTCACTATAGTCAATCCCACACGGCTTCATGGATCAGAGGCGAGTGCGTAGGCAGAGGCGCGTTCGGCACGGTCAATATCGGAGTCCGCAAATCGGACGGTGAAGTGTTCGCCGTCAAGTCCGTGGATCTCGCCGCGTGTCTCCCCAGCCAGGCGGAGGCGCTCGAGAACGAAATCCGGATTCTCCGGTCGCTCTCCTCGCCTTACGTCGTGAAGTACCTGAACGACGATCACACGGCGTCGTTTCGGAACTTGCATATGGAGTACTTGCCGGGCGGCACCGCCGGGGACTCTGCTGACGTGGACGAGAGTGTCGTACAGTCGCGGACGTGGTGCGTGGTGTCGGCTCTCAAGTATGTACACTCCCGGGGGATTGTTCACTGCGACGTGAAAGGGAGAAATGTTCTGGTGGGGCCCGGTTCGGACCAGGCGAAGCTCGGGGATTTCGGTTCGGCCGTGGATTATATGTCGGCGGACTGGTGTAGGGGGAGAATCTCGCCACGTGGAAGCCCGCTGTGGATGGCGCCGGAGGTGATTAGCGGGGAGTATCAGGGGCCCGAGTCCGACGTGTGGTCGTTGGGTTGCACGGTGATCGAGATGGTCACGGGAAAACCGGCGTGGGAGGACGAGGGAATGGAGACGCTGAGCCGGATCGGGTTGTCGGGCGGGTTGCCGGAGTTTCCGACCCGGTTGTCCGAAACGGGTCGGGATTTTCTGGACAAGTGTCTGAGGAGAGACCCGGAGGAGAGGTGGAGCTGCGATCAGCTACTGCAGCACCCATTTCTGGCGTCAGTTTCGCCCAATGCGGCGGCGGATTCTTCGCCGCGGTGCGTGCTCGACTGGGTCAACTCGGAGTTCGAAGACGACGAGTACGAAAACGACGAAGAGAGTTGTTCTATTCACGAGGTTTCCGCTAAGGAGCGGATTGGTAAATTGGCCTCGAACTCAGGGGTAGATTGGGAATTTTCGGACGGGTGGACGGTGGTGCGGGGCGCAGTACAAGTAGTGGAATCCGGCGCGTTTTCGCGGGAAGAGATGAGTTCGGGATATTCAGATTGTGAAGGGGCATTTTCGGAAGGTGAAAGTTGCGGTGGCGGTGATTTAGTAGAGTGGGCACGTAATGAGTGTGGTACGGTTGGCTCAAGTGGTCGTTGGTATGGGCCGTCGGTGATGGAATATTCGGCGGTGGAGAGGAGCGTCGGCAAAGGAAGAAAGTCTTATAATTATTATAGCCGGTGTAGTAATTTGTGTAGAAGCAGATTTTTACTTGCATATTCTTTTGGGGTGAAAATGAATAAATTATTGATTTTTATGAGTCGTTATACTTGTATTATCTTTATTTGGAAATATAATAAAGTCAAAATATTACTTGATTTTTCTTGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000165 GO:0000186 GO:0000746 GO:0000747 GO:0000749 GO:0000750 GO:0000935 GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004709 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007186 GO:0008150 GO:0008152 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010514 GO:0010562 GO:0010564 GO:0010604 GO:0010646 GO:0010647 GO:0010941 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019236 GO:0019538 GO:0019953 GO:0022414 GO:0022603 GO:0023014 GO:0023051 GO:0023052 GO:0023056 GO:0030428 GO:0031098 GO:0031136 GO:0031137 GO:0031139 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032005 GO:0032147 GO:0032153 GO:0032155 GO:0032268 GO:0032270 GO:0033554 GO:0033674 GO:0034306 GO:0034307 GO:0035556 GO:0036211 GO:0042173 GO:0042221 GO:0042325 GO:0042327 GO:0042981 GO:0043067 GO:0043085 GO:0043170 GO:0043405 GO:0043406 GO:0043408 GO:0043410 GO:0043412 GO:0043549 GO:0043900 GO:0043902 GO:0043937 GO:0043940 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0044703 GO:0044764 GO:0045595 GO:0045859 GO:0045860 GO:0045937 GO:0046999 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051286 GO:0051338 GO:0051347 GO:0051445 GO:0051704 GO:0051716 GO:0051726 GO:0060255 GO:0060284 GO:0065007 GO:0065009 GO:0070887 GO:0071310 GO:0071444 GO:0071507 GO:0071704 GO:0071900 GO:0071902 GO:0071944 GO:0080090 GO:0140096 GO:1901564 GO:1902531 GO:1902533 GO:2000241 GO:2000243
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase

Protein Analysis

464

Amino Acids

51.28

Weight (kDa)

4.98

Isoelectric Point (pI)

50.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 17 - 265 4.3e-55 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 18 - 261 2.5e-27 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0015235)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07150 AT1G07150 AT2G30040
fragaria_vesca FvH4_3g39010
malus_domestica MD03G1065400.v1.1 MD11G1070200.v1.1
prunus_persica Prupe.6G054400_v2.0.a1
rosa_chinensis RchiOBHm_Chr5g0070321
rosa_laevigata RLG00000036124
rosa_multiflora Rmu_co8495105.1_g000001 Rmu_sc0009590.1_g000003
rosa_rugosa Rorug05G0404900
rosa_samantha Rh5AG460500 Rh5BG478800 Rh5CG503000
rosa_wichuraiana Rw5G042920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1230
AasI GACNNNNNNGTC 2 cut(s) 320, 700
AccB1I GGYRCC 2 cut(s) 287, 532
AccBSI CCGCTC 1 cut(s) 931
AccII CGCG 6 cut(s) 71, 146, 334, 835, 1028, 1036
AccIII TCCGGA 1 cut(s) 186
AclWI GGATC 3 cut(s) 50, 144, 668
AcoI YGGCCR 1 cut(s) 462
AcsI RAATTY 2 cut(s) 7, 971
AcvI CACGTG 1 cut(s) 512
AcyI GRCGYC 3 cut(s) 248, 533, 797
AfaI GTAC 7 cut(s) 227, 275, 327, 369, 881, 1008, 1141
AfiI CCNNNNNNNGG 5 cut(s) 103, 160, 166, 579, 793
AflIII ACRYGT 1 cut(s) 576
AhdI GACNNNNNGTC 1 cut(s) 580
AjiI CACGTC 4 cut(s) 310, 339, 397, 577
AjnI CCWGG 2 cut(s) 159, 435
AluBI AGCT 3 cut(s) 445, 765, 775
AluI AGCT 3 cut(s) 445, 765, 775
Alw21I GWGCWC 1 cut(s) 846
Alw26I GTCTC 3 cut(s) 155, 641, 738
AlwI GGATC 3 cut(s) 50, 144, 668
AlwNI CAGNNNCTG 1 cut(s) 778
Ama87I CYCGRG 4 cut(s) 173, 375, 446, 566
Aor13HI TCCGGA 1 cut(s) 186
AoxI GGCC 5 cut(s) 422, 462, 563, 945, 1169
ApaI GGGCCC 2 cut(s) 426, 567
ApeKI GCWGC 2 cut(s) 765, 781
ApoI RAATTY 2 cut(s) 7, 971
AspLEI GCGC 5 cut(s) 71, 172, 535, 1004, 1028
AspS9I GGNCC 6 cut(s) 422, 423, 433, 563, 564, 1169
AsuC2I CCSGG 7 cut(s) 282, 295, 376, 377, 426, 697, 749
AsuHPI GGTGA 7 cut(s) 122, 553, 610, 1100, 1118, 1189, 1306
AsuII TTCGAA 1 cut(s) 867
AvaI CYCGRG 4 cut(s) 173, 375, 446, 566
AvaII GGWCC 1 cut(s) 433
BaeGI GKGCMC 3 cut(s) 426, 567, 1126
BanI GGYRCC 2 cut(s) 287, 532
BanII GRGCYC 2 cut(s) 426, 567
BauI CACGAG 1 cut(s) 911
BbrPI CACGTG 1 cut(s) 512
BbsI GAAGAC 1 cut(s) 876
Bbv12I GWGCWC 1 cut(s) 846
BbvI GCAGC 2 cut(s) 752, 793
BccI CCATC 3 cut(s) 523, 601, 1174
BceAI ACGGC 5 cut(s) 48, 107, 261, 449, 1156
BcgI CGANNNNNNTGC 2 cut(s) 583, 617
BciT130I CCWGG 2 cut(s) 161, 437
BcnI CCSGG 7 cut(s) 282, 295, 376, 377, 426, 697, 749
BcoDI GTCTC 3 cut(s) 155, 641, 738
BfmI CTRYAG 2 cut(s) 16, 779
BfoI RGCGCY 2 cut(s) 173, 536
BisI GCNGC 7 cut(s) 144, 286, 766, 782, 816, 819, 833
BlpI GCTNAGC 1 cut(s) 653
BlsI GCNGC 7 cut(s) 145, 287, 767, 783, 817, 820, 834
BmcAI AGTACT 1 cut(s) 275
Bme1390I CCNGG 9 cut(s) 161, 282, 295, 376, 377, 426, 437, 697, 749
Bme18I GGWCC 1 cut(s) 433
BmeRI GACNNNNNGTC 1 cut(s) 580
BmeT110I CYCGRG 4 cut(s) 173, 375, 446, 566
BmgBI CACGTC 4 cut(s) 310, 339, 397, 577
BmgT120I GGNCC 6 cut(s) 422, 423, 433, 563, 564, 1169
BmiI GGNNCC 6 cut(s) 289, 423, 424, 534, 564, 565
BmrFI CCNGG 9 cut(s) 161, 282, 295, 376, 377, 426, 437, 697, 749
BmrI ACTGGG 1 cut(s) 859
BmuI ACTGGG 1 cut(s) 859
BoxI GACNNNNGTC 1 cut(s) 732
BpiI GAAGAC 1 cut(s) 876
Bpu10I CCTNAGC 1 cut(s) 924
Bpu1102I GCTNAGC 1 cut(s) 653
Bpu14I TTCGAA 1 cut(s) 867
BpuEI CTTGAG 2 cut(s) 344, 1135
BpuMI CCSGG 7 cut(s) 282, 295, 376, 377, 426, 697, 749
BsaAI YACGTR 2 cut(s) 512, 1127
BsaHI GRCGYC 3 cut(s) 248, 533, 797
BsaI GGTCTC 1 cut(s) 738
BsaJI CCNNGG 6 cut(s) 132, 294, 375, 376, 465, 833
BsaWI WCCGGW 2 cut(s) 186, 195
BsaXI ACNNNNNCTCC 2 cut(s) 743, 773
Bsc4I CCNNNNNNNGG 5 cut(s) 103, 160, 166, 579, 793
Bse118I RCCGGY 2 cut(s) 622, 1242
Bse1I ACTGG 2 cut(s) 491, 854
BseAI TCCGGA 1 cut(s) 186
BseBI CCWGG 2 cut(s) 161, 437
BseDI CCNNGG 6 cut(s) 132, 294, 375, 376, 465, 833
BseGI GGATG 1 cut(s) 534
BseLI CCNNNNNNNGG 5 cut(s) 103, 160, 166, 579, 793
BseMII CTCAG 3 cut(s) 644, 728, 969
BseNI ACTGG 2 cut(s) 491, 854
BseRI GAGGAG 4 cut(s) 196, 754, 767, 1216
BseSI GKGCMC 3 cut(s) 426, 567, 1126
BseX3I CGGCCG 1 cut(s) 462
BseXI GCAGC 2 cut(s) 752, 793
BseYI CCCAGC 1 cut(s) 155
Bsh1236I CGCG 6 cut(s) 71, 146, 334, 835, 1028, 1036
Bsh1285I CGRYCG 2 cut(s) 200, 465
BshFI GGCC 5 cut(s) 424, 464, 565, 947, 1171
BshNI GGYRCC 2 cut(s) 287, 532
BsiEI CGRYCG 2 cut(s) 200, 465
BsiHKAI GWGCWC 1 cut(s) 846
BsiHKCI CYCGRG 4 cut(s) 173, 375, 446, 566
BslFI GGGAC 1 cut(s) 311
BslI CCNNNNNNNGG 5 cut(s) 103, 160, 166, 579, 793
BsmAI GTCTC 3 cut(s) 155, 641, 738
BsmBI CGTCTC 1 cut(s) 641
BsmFI GGGAC 1 cut(s) 311
BsnI GGCC 5 cut(s) 424, 464, 565, 947, 1171
Bso31I GGTCTC 1 cut(s) 738
BsoBI CYCGRG 4 cut(s) 173, 375, 446, 566
Bsp119I TTCGAA 1 cut(s) 867
Bsp120I GGGCCC 2 cut(s) 422, 563
Bsp1286I GDGCHC 4 cut(s) 426, 567, 846, 1126
Bsp13I TCCGGA 1 cut(s) 186
Bsp1407I TGTACA 1 cut(s) 367
Bsp143I GATC 6 cut(s) 42, 136, 238, 600, 660, 769
Bsp1720I GCTNAGC 1 cut(s) 653
BspANI GGCC 5 cut(s) 424, 464, 565, 947, 1171
BspCNI CTCAG 3 cut(s) 645, 729, 968
BspEI TCCGGA 1 cut(s) 186
BspFNI CGCG 6 cut(s) 71, 146, 334, 835, 1028, 1036
BspLI GGNNCC 6 cut(s) 289, 423, 424, 534, 564, 565
BspMAI CTGCAG 1 cut(s) 783
BspPI GGATC 3 cut(s) 50, 144, 668
BspT104I TTCGAA 1 cut(s) 867
BspT107I GGYRCC 2 cut(s) 287, 532
BspTNI GGTCTC 1 cut(s) 738
BsrBI CCGCTC 1 cut(s) 931
BsrFI RCCGGY 2 cut(s) 622, 1242
BsrGI TGTACA 1 cut(s) 367
BsrI ACTGG 2 cut(s) 491, 854
BssAI RCCGGY 2 cut(s) 622, 1242
BssECI CCNNGG 6 cut(s) 132, 294, 375, 376, 465, 833
BssMI GATC 6 cut(s) 42, 136, 238, 600, 660, 769
BssNI GRCGYC 3 cut(s) 248, 533, 797
BssSI CACGAG 1 cut(s) 911
Bst2BI CACGAG 1 cut(s) 911
Bst2UI CCWGG 2 cut(s) 161, 437
Bst4CI ACNGT 6 cut(s) 82, 110, 330, 598, 991, 1144
Bst6I CTCTTC 2 cut(s) 888, 1035
BstACI GRCGYC 3 cut(s) 248, 533, 797
BstAUI TGTACA 1 cut(s) 367
BstBAI YACGTR 2 cut(s) 512, 1127
BstBI TTCGAA 1 cut(s) 867
BstC8I GCNNGC 2 cut(s) 521, 842
BstDEI CTNAG 4 cut(s) 653, 737, 924, 955
BstDSI CCRYGG 3 cut(s) 132, 465, 833
BstF5I GGATG 1 cut(s) 534
BstFNI CGCG 6 cut(s) 71, 146, 334, 835, 1028, 1036
BstH2I RGCGCY 2 cut(s) 173, 536
BstHHI GCGC 5 cut(s) 71, 172, 535, 1004, 1028
BstKTI GATC 6 cut(s) 45, 139, 241, 603, 663, 772
BstMAI GTCTC 3 cut(s) 155, 641, 738
BstMBI GATC 6 cut(s) 42, 136, 238, 600, 660, 769
BstMCI CGRYCG 2 cut(s) 200, 465
BstMWI GCNNNNNNNGC 4 cut(s) 75, 208, 781, 841
BstNI CCWGG 2 cut(s) 161, 437
BstPAI GACNNNNGTC 1 cut(s) 732
BstSCI CCNGG 9 cut(s) 159, 280, 293, 374, 375, 424, 435, 695, 747
BstSFI CTRYAG 2 cut(s) 16, 779
BstSLI GKGCMC 3 cut(s) 426, 567, 1126
BstUI CGCG 6 cut(s) 71, 146, 334, 835, 1028, 1036
BstV1I GCAGC 2 cut(s) 752, 793
BstV2I GAAGAC 1 cut(s) 876
BstX2I RGATCY 1 cut(s) 136
BstYI RGATCY 1 cut(s) 136
BstZI CGGCCG 1 cut(s) 462
BsuRI GGCC 5 cut(s) 424, 464, 565, 947, 1171
BtgI CCRYGG 3 cut(s) 132, 465, 833
BtrI CACGTC 4 cut(s) 310, 339, 397, 577
BtsCI GGATG 1 cut(s) 534
BtsI GCAGTG 1 cut(s) 388
BtsIMutI CAGTG 1 cut(s) 388
Cac8I GCNNGC 2 cut(s) 521, 842
CaiI CAGNNNCTG 1 cut(s) 778
CfoI GCGC 5 cut(s) 71, 172, 535, 1004, 1028
Cfr10I RCCGGY 2 cut(s) 622, 1242
Cfr13I GGNCC 6 cut(s) 422, 423, 433, 563, 564, 1169
Cfr42I CCGCGG 1 cut(s) 836
Cfr9I CCCGGG 1 cut(s) 375
CseI GACGC 4 cut(s) 237, 658, 786, 1195
Csp6I GTAC 7 cut(s) 226, 274, 326, 368, 880, 1007, 1140
CviAII CATG 1 cut(s) 39
CviQI GTAC 7 cut(s) 226, 274, 326, 368, 880, 1007, 1140
DdeI CTNAG 4 cut(s) 653, 737, 924, 955
DinI GGCGCC 1 cut(s) 534
DpnI GATC 6 cut(s) 44, 138, 240, 602, 662, 771
DpnII GATC 6 cut(s) 42, 136, 238, 600, 660, 769
DrdI GACNNNNNNGTC 2 cut(s) 320, 700
DriI GACNNNNNGTC 1 cut(s) 580
DseDI GACNNNNNNGTC 2 cut(s) 320, 700
EaeI YGGCCR 1 cut(s) 462
EagI CGGCCG 1 cut(s) 462
Eam1104I CTCTTC 2 cut(s) 888, 1035
Eam1105I GACNNNNNGTC 1 cut(s) 580
EarI CTCTTC 2 cut(s) 888, 1035
EciI GGCGGA 3 cut(s) 179, 497, 836
EclXI CGGCCG 1 cut(s) 462
Eco24I GRGCYC 2 cut(s) 426, 567
Eco31I GGTCTC 1 cut(s) 738
Eco47I GGWCC 1 cut(s) 433
Eco52I CGGCCG 1 cut(s) 462
Eco72I CACGTG 1 cut(s) 512
Eco88I CYCGRG 4 cut(s) 173, 375, 446, 566
EcoO109I RGGNCCY 2 cut(s) 422, 563
EcoRI GAATTC 1 cut(s) 7
EcoRII CCWGG 2 cut(s) 159, 435
EcoT38I GRGCYC 2 cut(s) 426, 567
EgeI GGCGCC 1 cut(s) 534
EheI GGCGCC 1 cut(s) 534
Esp3I CGTCTC 1 cut(s) 641
FaeI CATG 1 cut(s) 42
FalI AAGNNNNNCTT 2 cut(s) 1210, 1242
FaqI GGGAC 1 cut(s) 311
FatI CATG 1 cut(s) 38
FauI CCCGC 5 cut(s) 528, 542, 668, 990, 1029
FauNDI CATATG 1 cut(s) 267
Fnu4HI GCNGC 7 cut(s) 144, 286, 766, 782, 816, 819, 833
FokI GGATG 1 cut(s) 541
FriOI GRGCYC 2 cut(s) 426, 567
Fsp4HI GCNGC 7 cut(s) 144, 286, 766, 782, 816, 819, 833
GlaI GCGC 5 cut(s) 70, 171, 534, 1003, 1027
GluI GCNGC 7 cut(s) 144, 286, 766, 782, 816, 819, 833
GsaI CCCAGC 1 cut(s) 159
HaeII RGCGCY 2 cut(s) 173, 536
HaeIII GGCC 5 cut(s) 424, 464, 565, 947, 1171
HgaI GACGC 4 cut(s) 237, 658, 786, 1195
HhaI GCGC 5 cut(s) 71, 172, 535, 1004, 1028
Hin1I GRCGYC 3 cut(s) 248, 533, 797
Hin1II CATG 1 cut(s) 42
Hin6I GCGC 5 cut(s) 69, 170, 533, 1002, 1026
HinP1I GCGC 5 cut(s) 69, 170, 533, 1002, 1026
HincII GTYRAC 1 cut(s) 856
HindII GTYRAC 1 cut(s) 856
HinfI GANTC 8 cut(s) 93, 190, 299, 501, 569, 824, 1019, 1324
HphI GGTGA 7 cut(s) 122, 553, 610, 1100, 1118, 1189, 1306
Hpy166II GTNNAC 5 cut(s) 313, 370, 388, 856, 987
Hpy188III TCNNGA 8 cut(s) 175, 187, 220, 604, 716, 725, 911, 1053
Hpy8I GTNNAC 5 cut(s) 313, 370, 388, 856, 987
Hpy99I CGWCG 9 cut(s) 221, 239, 253, 398, 578, 878, 893, 1177, 1211
HpyAV CCTTC 2 cut(s) 1064, 1079
HpyCH4III ACNGT 6 cut(s) 82, 110, 330, 598, 991, 1144
HpyCH4IV ACGT 7 cut(s) 216, 309, 338, 396, 511, 576, 1126
HpyCH4V TGCA 4 cut(s) 265, 594, 781, 1280
HpyF10VI GCNNNNNNNGC 4 cut(s) 75, 208, 781, 841
HpyF3I CTNAG 4 cut(s) 653, 737, 924, 955
HpySE526I ACGT 7 cut(s) 216, 309, 338, 396, 511, 576, 1126
Hsp92I GRCGYC 3 cut(s) 248, 533, 797
Hsp92II CATG 1 cut(s) 42
HspAI GCGC 5 cut(s) 69, 170, 533, 1002, 1026
KasI GGCGCC 1 cut(s) 532
Kpn2I TCCGGA 1 cut(s) 186
KspI CCGCGG 1 cut(s) 836
Kzo9I GATC 6 cut(s) 42, 136, 238, 600, 660, 769
LmnI GCTCC 3 cut(s) 762, 928, 1203
Lsp1109I GCAGC 2 cut(s) 752, 793
MaeII ACGT 7 cut(s) 216, 309, 338, 396, 511, 576, 1126
MaeIII GTNAC 1 cut(s) 610
MalI GATC 6 cut(s) 44, 138, 240, 602, 662, 771
MbiI CCGCTC 1 cut(s) 931
MboI GATC 6 cut(s) 42, 136, 238, 600, 660, 769
MboII GAAGA 5 cut(s) 819, 881, 905, 1052, 1230
MflI RGATCY 1 cut(s) 136
MhlI GDGCHC 4 cut(s) 426, 567, 846, 1126
MluCI AATT 6 cut(s) 7, 941, 971, 1231, 1252, 1307
Mly113I GGCGCC 1 cut(s) 533
MlyI GAGTC 4 cut(s) 102, 293, 578, 1333
MmeI TCCRAC 2 cut(s) 597, 716
MroI TCCGGA 1 cut(s) 186
MspA1I CMGCKG 2 cut(s) 523, 835
MspR9I CCNGG 9 cut(s) 161, 282, 295, 376, 377, 426, 437, 697, 749
MvaI CCWGG 2 cut(s) 161, 437
MvnI CGCG 6 cut(s) 71, 146, 334, 835, 1028, 1036
MwoI GCNNNNNNNGC 4 cut(s) 75, 208, 781, 841
NarI GGCGCC 1 cut(s) 533
NciI CCSGG 7 cut(s) 282, 295, 376, 377, 426, 697, 749
NdeI CATATG 1 cut(s) 267
NdeII GATC 6 cut(s) 42, 136, 238, 600, 660, 769
NlaIII CATG 1 cut(s) 42
NlaIV GGNNCC 6 cut(s) 289, 423, 424, 534, 564, 565
NmuCI GTSAC 1 cut(s) 610
NspV TTCGAA 1 cut(s) 867
PaeR7I CTCGAG 1 cut(s) 173
PcsI WCGNNNNNNNCGW 6 cut(s) 321, 437, 462, 873, 879, 888
PfeI GAWTC 4 cut(s) 190, 501, 824, 1019
PflFI GACNNNGTC 1 cut(s) 851
PkrI GCNGC 7 cut(s) 145, 287, 767, 783, 817, 820, 834
PleI GAGTC 4 cut(s) 101, 293, 577, 1332
PluTI GGCGCC 1 cut(s) 536
PmaCI CACGTG 1 cut(s) 512
PmlI CACGTG 1 cut(s) 512
PpsI GAGTC 4 cut(s) 101, 293, 577, 1332
Ppu21I YACGTR 2 cut(s) 512, 1127
PshAI GACNNNNGTC 1 cut(s) 732
PsiI TTATAA 1 cut(s) 1230
Psp6I CCWGG 2 cut(s) 159, 435
PspCI CACGTG 1 cut(s) 512
PspFI CCCAGC 1 cut(s) 155
PspGI CCWGG 2 cut(s) 159, 435
PspN4I GGNNCC 6 cut(s) 289, 423, 424, 534, 564, 565
PspOMI GGGCCC 2 cut(s) 422, 563
PspPI GGNCC 6 cut(s) 422, 423, 433, 563, 564, 1169
PstI CTGCAG 1 cut(s) 783
PstNI CAGNNNCTG 1 cut(s) 778
PsuI RGATCY 1 cut(s) 136
PsyI GACNNNGTC 1 cut(s) 851
RsaI GTAC 7 cut(s) 227, 275, 327, 369, 881, 1008, 1141
RsaNI GTAC 7 cut(s) 226, 274, 326, 368, 880, 1007, 1140
SacII CCGCGG 1 cut(s) 836
SatI GCNGC 7 cut(s) 144, 286, 766, 782, 816, 819, 833
Sau3AI GATC 6 cut(s) 42, 136, 238, 600, 660, 769
Sau96I GGNCC 6 cut(s) 422, 423, 433, 563, 564, 1169
ScaI AGTACT 1 cut(s) 275
SchI GAGTC 4 cut(s) 102, 293, 578, 1333
ScrFI CCNGG 9 cut(s) 161, 282, 295, 376, 377, 426, 437, 697, 749
SduI GDGCHC 4 cut(s) 426, 567, 846, 1126
SfcI CTRYAG 2 cut(s) 16, 779
SfoI GGCGCC 1 cut(s) 534
Sfr274I CTCGAG 1 cut(s) 173
Sfr303I CCGCGG 1 cut(s) 836
SfuI TTCGAA 1 cut(s) 867
SgrBI CCGCGG 1 cut(s) 836
SinI GGWCC 1 cut(s) 433
SlaI CTCGAG 1 cut(s) 173
SmaI CCCGGG 1 cut(s) 377
SmlI CTYRAG 3 cut(s) 173, 359, 1150
SmoI CTYRAG 3 cut(s) 173, 359, 1150
Sse9I AATT 6 cut(s) 7, 941, 971, 1231, 1252, 1307
SspDI GGCGCC 1 cut(s) 532
SspI AATATT 2 cut(s) 1187, 1374
StyD4I CCNGG 9 cut(s) 159, 280, 293, 374, 375, 424, 435, 695, 747
TaaI ACNGT 6 cut(s) 82, 110, 330, 598, 991, 1144
TaiI ACGT 7 cut(s) 219, 312, 341, 399, 514, 579, 1129
TaqI TCGA 5 cut(s) 174, 603, 846, 867, 950
TasI AATT 6 cut(s) 7, 941, 971, 1231, 1252, 1307
TatI WGTACW 3 cut(s) 273, 367, 1006
TauI GCSGC 5 cut(s) 146, 288, 818, 821, 835
TfiI GAWTC 4 cut(s) 190, 501, 824, 1019
TscAI CASTG 1 cut(s) 395
TseFI GTSAC 1 cut(s) 610
TseI GCWGC 2 cut(s) 765, 781
Tsp45I GTSAC 1 cut(s) 610
TspDTI ATGAA 2 cut(s) 27, 1316
TspGWI ACGGA 1 cut(s) 121
TspMI CCCGGG 1 cut(s) 375
TspRI CASTG 1 cut(s) 395
Tth111I GACNNNGTC 1 cut(s) 851
VpaK11BI GGWCC 1 cut(s) 433
XapI RAATTY 2 cut(s) 7, 971
XhoI CTCGAG 1 cut(s) 173
XmaI CCCGGG 1 cut(s) 375
ZrmI AGTACT 1 cut(s) 275
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.