Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0006119

Physical Location & Seq

Genomic Coordinates Forward (+)

35273839 .. 35279116

Gene Structure 5278 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g42241.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2691 bp

ATGGGGAACCGAAAAGAACGACGTCGTCTTGCCGCCATGTCCAGCTCTGGTCGCAGAGTCAAGCTCGACCTCTTCGCCGAACCCTCTGGAGGAGATTTGGGTGGCTCTGCTGAACATGAGGGAGTTGGAGGAGAAGTACATTCGAAAGCCGAGTCTGGGTTACCCAATTCACCATCTTCTTCAGGTCAGCGACCAGAAAATCCGCTGCTTTTACTTGGCCAGTATAGTGACGAGGAATTGGATGATGTCTCAAATAAAGCTCATAGTGATGCTGCTGTAGAGAATTCCTCGCCTCAGAATAACGATGAGGTTAAGAGCGTGCTTGATGAATCGGGACAAAATTTGGATATCAAAGGTGGCAATGAGCCTGCCTCTCAGGATTTCAATCAAAAGGGAGTGGACACAAACTCTGATACACTGGATCGTGATCAGAACATGGAAGATAGTGATAGAAGAGAAAATGGTGATCCGACACCTGGAATTTCATGTACAGAAGTTGATTCGGAGGAGAAAGTTTCTTTGCCAGAAACTTCTAGTGTACAGGTTATTGGTGATGTCAGTTCAGGTTGGAAGATTGTGATGCATGAAGACAGTAAAAGCTATTATTACTGGAATACTGAAACTGGGGAAACTTCATGGGAAGTGCCTGATGTTTTGGCTCAAGCTGCCAAGTCAACATGTGACCCGAAAATGCCTTCTATTGATGAAAAAACAGAGAATATTCCTGTTGGTATGCAAGAGTCTAATCGTTATTCTAATTCTGACGTCATTGAAGGGTCTTCCAATATGGTTCCTCAGGCCATTTATGGGGATGGGTCCCAGATGAATGACTGGAATATAGGATGCTATAATGGATCAGAGATTGATCCCTCCTCTCATCTTGTAAAATATACTGAGGCTTTGTTAGAGAGATTGAAGTCGCTACAAGGGTTCAAGGATCAACTGCAAGGTGTTGACCAGATCACAAAGTACATTTTGGAAGTTGAAATTAGACTGTTTGATTTGAAGTCACTTTATTCCTATGGATCATCTCTGCTTCCATTTTGGATGCATTCTGAAGGACAGCTTAAGCGGCTTGAGAGTGCAATCAATGATGAAATGTCCAAGATTGTTAAGCCTGGAGAAGCTGAGGCATCTCATCCATTATTCTCCCAGGGACAAATGAATATCCACAAAACCACAGGGTCTAAAACTGAAGTAGATCGAGTTGAAAATAAGCAACATATATCTTCTCTAAATAATTGTGAGGGTTCTCTTAGTGCGGATGCAGTCAATGAAGATCAAGAAGTTAAACACTCCACTGCAAAGAATGAGCATGTGGAGGTTGGTGCGAGTGAACAAGTCCACAGGATAGTAGTTCCTGATGAGTTAACTACCAAGAATGAGGTTTATGTCGAGGAAGATGTTGACATGGATGTGGACATGGAAGTTGAAGATTCAAACTCGGCTGGAAATACAGCTATTTATTATGGGGTGCATGCCGAGGAGTTCTCTGCAACAGAGCAGCCAAATAAACCTAGTTCAACTTCCTTACCCACATCGCTAGTTTCAGAGGATAATTTTGCGGTTCCACCTCCTCCTGATGAGGAATGGATTCCTCCACCCCCACCTGATAATGAACAGGTTCCTCCGCCTCCACCTGATGAGCCACCACCTGAACCTCCGTACCCTCCACTGCCATCTTACTCTGAGACCGGGCAACCTCCCTATGTAGAACAGTACAGTTTCTCCTATCCAGTTTCCAGTTTTGAATATTACGGACATACAGTTACTGAAGCACCTGGTAGTAATTATTATGGACACGCACACGCTGACGGATGCCAAGTTGCTGTACCCCACGTACCAGTTTACTATGGTACAGTTCCTAGCCCCTACACTGAAAATGCTCAGGTTGTGGCAAATCCTGTCGCGCCTGTAGCATATTATGGGCTTCATGATGGTGCAGTGCCTACCCCTCCTGTAGTCAGTAGTGTAGATTCCTTGCAATTTCACAGCGGGTCTGCTCCTCTTAGCTCTGACAACCTTGCATCTGATCAACCCAGATCTATCAACTCTTCTGAAGGAGCAGACAAGGGTTCAACTGTGCAGGTTCCCACTACCTCGGCCACAGTCGAAGCACCTGCAACTATAATGGAAAAAGATATTGTTCCTGTTCCACTAAATAATCCGGTCTCTACTGCTGCACCTATTCCTGCTACATCAGTGGTGGCTAAGGTTCAATCAAAAGTTCAAAGTACTAAAAAGAGGAAAACACCAGCTTCTTCTTCCTTGAGGTCTAATAAGAAAGTCTCCAGTTTGGTAGACAAGTGGAAAGCAGCTAAAGAGGAGTTGCTTGAAGATGAGGAGGAATCTGAGGATACATATGAGTCGCTAGAGAGGAAGAGGCAAAGGGAAATAGAGGAATGGTATTCGCAACAAATTACAAGTGGAGATGCCAAAGACAATGCTAATTTTCAACCATTAGGTGGCAATTGGCGTGAGAAGGTGAAGCGAAGAAAGGCTCAGTTAGCCCGTGAGGCTGCACAGACCGCACCCGAAGCACCTAGTAATGGGAACCAACAACCCGATCTTACCGAACTCTCAAGGGATCTCCCATCTGGATGGCAGGTTTACTGGGATGAATCCTCAAAGCAGGTTTATTACGGAAATACTGTAACCTCAGAAACTACTTGGACAAGACCAACAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0016604 GO:0016607 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0070013

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

897

Amino Acids

98.05

Weight (kDa)

4.56

Isoelectric Point (pI)

55.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WW	PF00397	135 - 163	3.5e-08	WW domain
WW	PF00397	811 - 841	2.1e-09	WW domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006119)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G13225 AT3G13225 AT3G13225
fragaria_vesca	FvH4_3g42241 FvH4_3g42241 FvH4_3g42241 FvH4_3g42241 FvH4_3g42241 FvH4_3g42241 FvH4_3g42241
malus_domestica	MD03G1035400.v1.1 MD11G1037100.v1.1
prunus_persica	Prupe.6G028400_v2.0.a1 Prupe.6G028400_v2.0.a1
pyrus_communis	pycom03g02760 pycom11g03080
rosa_chinensis	RchiOBHm_Chr5g0075571
rosa_laevigata	RLG00000036576
rosa_multiflora	Rmu_sc0003437.1_g000006
rosa_roxburghii	Rroxscaffold_1G00006000
rosa_rugosa	Rorug05G0440600 Rorug05G0440700
rosa_samantha	Rh5AG497800 Rh5BG518600 Rh5CG542300 Rh5DG530500
rosa_wichuraiana	Rw5G046140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2128
AatII	GACGTC	2 cut(s)	25, 768
Acc36I	ACCTGC	4 cut(s)	2077, 2128, 2596, 2623
AccB7I	CCANNNNNTGG	1 cut(s)	2465
AccI	GTMKAC	1 cut(s)	2301
AccII	CGCG	1 cut(s)	1910
AciI	CCGC	8 cut(s)	33, 203, 1072, 1262, 1565, 1631, 1995, 2529
AclWI	GGATC	7 cut(s)	429, 461, 860, 862, 945, 1033, 2595
AcoI	YGGCCR	2 cut(s)	217, 2103
AcsI	RAATTY	3 cut(s)	283, 340, 480
AcuI	CTGAAG	5 cut(s)	165, 1077, 1215, 1794, 2079
AcyI	GRCGYC	2 cut(s)	22, 765
AfiI	CCNNNNNNNGG	6 cut(s)	89, 156, 476, 807, 2465, 2549
AflII	CTTAAG	1 cut(s)	1067
AflIII	ACRYGT	1 cut(s)	677
AjnI	CCWGG	4 cut(s)	475, 1117, 1152, 1780
Alw26I	GTCTC	4 cut(s)	253, 1685, 2176, 2293
AlwI	GGATC	7 cut(s)	429, 461, 860, 862, 945, 1033, 2595
AlwNI	CAGNNNCTG	1 cut(s)	1772
AoxI	GGCC	3 cut(s)	217, 798, 2103
ApeKI	GCWGC	7 cut(s)	205, 272, 665, 1504, 2180, 2315, 2519
ApoI	RAATTY	3 cut(s)	283, 340, 480
ArsI	GACNNNNNNTTYG	2 cut(s)	137, 169
Asp700I	GAANNNNTTC	2 cut(s)	1593, 1623
AspLEI	GCGC	1 cut(s)	1912
AspS9I	GGNCC	1 cut(s)	816
AsuC2I	CCSGG	1 cut(s)	1696
AsuHPI	GGTGA	4 cut(s)	162, 476, 563, 2497
AsuII	TTCGAA	1 cut(s)	143
AvaII	GGWCC	1 cut(s)	816
AxyI	CCTNAGG	1 cut(s)	795
BaeI	ACNNNNGTAYC	2 cut(s)	1649, 1682
BalI	TGGCCA	1 cut(s)	219
BbsI	GAAGAC	2 cut(s)	594, 771
BbvCI	CCTCAGC	1 cut(s)	1128
BbvI	GCAGC	7 cut(s)	192, 259, 652, 1516, 2167, 2327, 2506
BccI	CCATC	6 cut(s)	181, 806, 1687, 1931, 2595, 2602
BcgI	CGANNNNNNTGC	2 cut(s)	2102, 2136
BciT130I	CCWGG	4 cut(s)	477, 1119, 1154, 1782
BciVI	GTATCC	1 cut(s)	2350
BclI	TGATCA	2 cut(s)	427, 2032
BcnI	CCSGG	1 cut(s)	1696
BcoDI	GTCTC	4 cut(s)	253, 1685, 2176, 2293
BfaI	CTAG	6 cut(s)	534, 1518, 1544, 1866, 2372, 2544
BfmI	CTRYAG	3 cut(s)	276, 1914, 1959
BfrI	CTTAAG	1 cut(s)	1067
BfuAI	ACCTGC	4 cut(s)	2077, 2128, 2596, 2623
BfuI	GTATCC	1 cut(s)	2350
BglI	GCCNNNNNGGC	1 cut(s)	2516
BglII	AGATCT	1 cut(s)	2042
BisI	GCNGC	9 cut(s)	33, 206, 273, 666, 1073, 1505, 2181, 2316, 2520
BlsI	GCNGC	9 cut(s)	34, 207, 274, 667, 1074, 1506, 2182, 2317, 2521
BmcAI	AGTACT	1 cut(s)	2236
Bme1390I	CCNGG	5 cut(s)	477, 1119, 1154, 1696, 1782
Bme18I	GGWCC	1 cut(s)	816
BmgT120I	GGNCC	1 cut(s)	816
BmiI	GGNNCC	8 cut(s)	8, 792, 817, 818, 1569, 1626, 2091, 2555
BmrFI	CCNGG	5 cut(s)	477, 1119, 1154, 1696, 1782
BmrI	ACTGGG	2 cut(s)	633, 2623
BmsI	GCATC	9 cut(s)	259, 570, 833, 1038, 1142, 1255, 1808, 2036, 2422
BmuI	ACTGGG	2 cut(s)	633, 2623
BpiI	GAAGAC	2 cut(s)	594, 771
BplI	GAGNNNNNCTC	8 cut(s)	48, 80, 272, 304, 356, 388, 1475, 1507
BpmI	CTGGAG	3 cut(s)	108, 1140, 2275
Bpu10I	CCTNAGC	3 cut(s)	1128, 1887, 2211
Bpu14I	TTCGAA	1 cut(s)	143
BpuEI	CTTGAG	4 cut(s)	645, 1097, 2290, 2566
BpuMI	CCSGG	1 cut(s)	1696
BsaAI	YACGTR	1 cut(s)	1840
BsaBI	GATNNNNATC	2 cut(s)	384, 426
BsaHI	GRCGYC	2 cut(s)	22, 765
BsaI	GGTCTC	2 cut(s)	1685, 2176
BsaJI	CCNNGG	4 cut(s)	1152, 1153, 1482, 2100
BsaWI	WCCGGW	1 cut(s)	2167
BsaXI	ACNNNNNCTCC	4 cut(s)	120, 150, 1712, 1742
Bsc4I	CCNNNNNNNGG	6 cut(s)	89, 156, 476, 807, 2465, 2549
Bse21I	CCTNAGG	1 cut(s)	795
Bse3DI	GCAATG	1 cut(s)	367
Bse8I	GATNNNNATC	2 cut(s)	384, 426
BseBI	CCWGG	4 cut(s)	477, 1119, 1154, 1782
BseDI	CCNNGG	4 cut(s)	1152, 1153, 1482, 2100
BseJI	GATNNNNATC	2 cut(s)	384, 426
BseLI	CCNNNNNNNGG	6 cut(s)	89, 156, 476, 807, 2465, 2549
BseMI	GCAATG	1 cut(s)	367
BseRI	GAGGAG	9 cut(s)	105, 144, 521, 862, 1499, 1566, 1995, 2339, 2357
BseXI	GCAGC	7 cut(s)	192, 259, 652, 1516, 2167, 2327, 2506
BsgI	GTGCAG	4 cut(s)	1962, 2105, 2166, 2505
Bsh1236I	CGCG	1 cut(s)	1910
BshFI	GGCC	3 cut(s)	219, 800, 2105
BsiSI	CCGG	2 cut(s)	1695, 2168
BslFI	GGGAC	3 cut(s)	348, 802, 1170
BslI	CCNNNNNNNGG	6 cut(s)	89, 156, 476, 807, 2465, 2549
BsmAI	GTCTC	4 cut(s)	253, 1685, 2176, 2293
BsmFI	GGGAC	3 cut(s)	348, 802, 1170
BsmI	GAATGC	1 cut(s)	1051
BsnI	GGCC	3 cut(s)	219, 800, 2105
Bso31I	GGTCTC	2 cut(s)	1685, 2176
Bsp119I	TTCGAA	1 cut(s)	143
Bsp1407I	TGTACA	2 cut(s)	488, 538
BspACI	CCGC	8 cut(s)	33, 203, 1072, 1262, 1565, 1631, 1995, 2529
BspANI	GGCC	3 cut(s)	219, 800, 2105
BspFNI	CGCG	1 cut(s)	1910
BspHI	TCATGA	1 cut(s)	1933
BspLI	GGNNCC	8 cut(s)	8, 792, 817, 818, 1569, 1626, 2091, 2555
BspMI	ACCTGC	4 cut(s)	2077, 2128, 2596, 2623
BspPI	GGATC	7 cut(s)	429, 461, 860, 862, 945, 1033, 2595
BspT104I	TTCGAA	1 cut(s)	143
BspTI	CTTAAG	1 cut(s)	1067
BspTNI	GGTCTC	2 cut(s)	1685, 2176
BsrDI	GCAATG	1 cut(s)	367
BsrGI	TGTACA	2 cut(s)	488, 538
BssECI	CCNNGG	4 cut(s)	1152, 1153, 1482, 2100
BssNI	GRCGYC	2 cut(s)	22, 765
Bst2UI	CCWGG	4 cut(s)	477, 1119, 1154, 1782
Bst4CI	ACNGT	9 cut(s)	593, 996, 1719, 1724, 1768, 1861, 2083, 2110, 2653
Bst6I	CTCTTC	4 cut(s)	77, 448, 2059, 2375
BstACI	GRCGYC	2 cut(s)	22, 765
BstAFI	CTTAAG	1 cut(s)	1067
BstAUI	TGTACA	2 cut(s)	488, 538
BstBAI	YACGTR	1 cut(s)	1840
BstBI	TTCGAA	1 cut(s)	143
BstC8I	GCNNGC	3 cut(s)	320, 369, 1479
BstEII	GGTNACC	1 cut(s)	159
BstFNI	CGCG	1 cut(s)	1910
BstHHI	GCGC	1 cut(s)	1912
BstMAI	GTCTC	4 cut(s)	253, 1685, 2176, 2293
BstMWI	GCNNNNNNNGC	8 cut(s)	51, 665, 1072, 1916, 2507, 2516, 2528, 2537
BstNI	CCWGG	4 cut(s)	477, 1119, 1154, 1782
BstNSI	RCATGY	3 cut(s)	681, 1319, 1481
BstPI	GGTNACC	1 cut(s)	159
BstSCI	CCNGG	5 cut(s)	475, 1117, 1152, 1694, 1780
BstSFI	CTRYAG	3 cut(s)	276, 1914, 1959
BstUI	CGCG	1 cut(s)	1910
BstV1I	GCAGC	7 cut(s)	192, 259, 652, 1516, 2167, 2327, 2506
BstV2I	GAAGAC	2 cut(s)	594, 771
BstX2I	RGATCY	2 cut(s)	2042, 2587
BstXI	CCANNNNNNTGG	1 cut(s)	2601
BstYI	RGATCY	2 cut(s)	2042, 2587
Bsu36I	CCTNAGG	1 cut(s)	795
BsuI	GTATCC	1 cut(s)	2350
BsuRI	GGCC	3 cut(s)	219, 800, 2105
BtgZI	GCGATG	1 cut(s)	1524
BtsI	GCAGTG	3 cut(s)	1299, 1673, 1950
BtsIMutI	CAGTG	6 cut(s)	416, 1299, 1673, 1875, 1950, 2208
BveI	ACCTGC	4 cut(s)	2077, 2128, 2596, 2623
Cac8I	GCNNGC	3 cut(s)	320, 369, 1479
CaiI	CAGNNNCTG	1 cut(s)	1772
CciI	TCATGA	1 cut(s)	1933
CfoI	GCGC	1 cut(s)	1912
Cfr13I	GGNCC	1 cut(s)	816
CsiI	ACCWGGT	1 cut(s)	1780
EaeI	YGGCCR	2 cut(s)	217, 2103
Eam1104I	CTCTTC	4 cut(s)	77, 448, 2059, 2375
EarI	CTCTTC	4 cut(s)	77, 448, 2059, 2375
EciI	GGCGGA	1 cut(s)	1620
Eco31I	GGTCTC	2 cut(s)	1685, 2176
Eco32I	GATATC	1 cut(s)	349
Eco47I	GGWCC	1 cut(s)	816
Eco57I	CTGAAG	5 cut(s)	165, 1077, 1215, 1794, 2079
Eco81I	CCTNAGG	1 cut(s)	795
Eco91I	GGTNACC	1 cut(s)	159
EcoO109I	RGGNCCY	1 cut(s)	816
EcoO65I	GGTNACC	1 cut(s)	159
EcoRI	GAATTC	1 cut(s)	283
EcoRII	CCWGG	4 cut(s)	475, 1117, 1152, 1780
EcoRV	GATATC	1 cut(s)	349
EcoT22I	ATGCAT	2 cut(s)	585, 1053
FalI	AAGNNNNNCTT	2 cut(s)	1050, 1082
FaqI	GGGAC	3 cut(s)	348, 802, 1170
FauI	CCCGC	1 cut(s)	1988
FauNDI	CATATG	1 cut(s)	2362
FbaI	TGATCA	2 cut(s)	427, 2032
FblI	GTMKAC	1 cut(s)	2301
Fnu4HI	GCNGC	9 cut(s)	33, 206, 273, 666, 1073, 1505, 2181, 2316, 2520
Fsp4HI	GCNGC	9 cut(s)	33, 206, 273, 666, 1073, 1505, 2181, 2316, 2520
FspBI	CTAG	6 cut(s)	534, 1518, 1544, 1866, 2372, 2544
GlaI	GCGC	1 cut(s)	1911
GluI	GCNGC	9 cut(s)	33, 206, 273, 666, 1073, 1505, 2181, 2316, 2520
GsuI	CTGGAG	3 cut(s)	108, 1140, 2275
HaeIII	GGCC	3 cut(s)	219, 800, 2105
HapII	CCGG	2 cut(s)	1695, 2168
HhaI	GCGC	1 cut(s)	1912
Hin1I	GRCGYC	2 cut(s)	22, 765
Hin6I	GCGC	1 cut(s)	1910
HinP1I	GCGC	1 cut(s)	1910
HincII	GTYRAC	4 cut(s)	675, 955, 1371, 1408
HindII	GTYRAC	4 cut(s)	675, 955, 1371, 1408
HpaI	GTTAAC	1 cut(s)	1371
HpaII	CCGG	2 cut(s)	1695, 2168
HphI	GGTGA	4 cut(s)	162, 476, 563, 2497
Hpy188III	TCNNGA	9 cut(s)	87, 333, 377, 425, 1283, 1361, 1580, 1934, 2598
Hpy99I	CGWCG	2 cut(s)	24, 27
HpyAV	CCTTC	5 cut(s)	705, 767, 1052, 2054, 2476
HpyCH4III	ACNGT	9 cut(s)	593, 996, 1719, 1724, 1768, 1861, 2083, 2110, 2653
HpyCH4IV	ACGT	3 cut(s)	22, 765, 1839
HpyF10VI	GCNNNNNNNGC	8 cut(s)	51, 665, 1072, 1916, 2507, 2516, 2528, 2537
HpySE526I	ACGT	3 cut(s)	22, 765, 1839
Hsp92I	GRCGYC	2 cut(s)	22, 765
HspAI	GCGC	1 cut(s)	1910
KflI	GGGWCCC	1 cut(s)	816
Ksp22I	TGATCA	2 cut(s)	427, 2032
KspAI	GTTAAC	1 cut(s)	1371
LmnI	GCTCC	2 cut(s)	2008, 2063
Lsp1109I	GCAGC	7 cut(s)	192, 259, 652, 1516, 2167, 2327, 2506
LweI	GCATC	9 cut(s)	259, 570, 833, 1038, 1142, 1255, 1808, 2036, 2422
MabI	ACCWGGT	1 cut(s)	1780
MaeI	CTAG	6 cut(s)	534, 1518, 1544, 1866, 2372, 2544
MaeII	ACGT	3 cut(s)	22, 765, 1839
MaeIII	GTNAC	6 cut(s)	159, 227, 680, 1008, 1768, 2653
MfeI	CAATTG	1 cut(s)	2470
MflI	RGATCY	2 cut(s)	2042, 2587
MlsI	TGGCCA	1 cut(s)	219
MluNI	TGGCCA	1 cut(s)	219
MlyI	GAGTC	4 cut(s)	66, 161, 749, 2375
MmeI	TCCRAC	3 cut(s)	106, 494, 548
Mox20I	TGGCCA	1 cut(s)	219
Mph1103I	ATGCAT	2 cut(s)	585, 1053
MroXI	GAANNNNTTC	2 cut(s)	1593, 1623
MscI	TGGCCA	1 cut(s)	219
MseI	TTAA	5 cut(s)	312, 1068, 1113, 1290, 1370
MslI	CAYNNNNRTG	4 cut(s)	267, 1415, 1938, 2599
Msp20I	TGGCCA	1 cut(s)	219
MspA1I	CMGCKG	2 cut(s)	205, 1995
MspCI	CTTAAG	1 cut(s)	1067
MspI	CCGG	2 cut(s)	1695, 2168
MspR9I	CCNGG	5 cut(s)	477, 1119, 1154, 1696, 1782
MunI	CAATTG	1 cut(s)	2470
Mva1269I	GAATGC	1 cut(s)	1051
MvaI	CCWGG	4 cut(s)	477, 1119, 1154, 1782
MvnI	CGCG	1 cut(s)	1910
MwoI	GCNNNNNNNGC	8 cut(s)	51, 665, 1072, 1916, 2507, 2516, 2528, 2537
NciI	CCSGG	1 cut(s)	1696
NdeI	CATATG	1 cut(s)	2362
NlaIV	GGNNCC	8 cut(s)	8, 792, 817, 818, 1569, 1626, 2091, 2555
NmeAIII	GCCGAG	4 cut(s)	175, 1424, 1507, 2081
NmuCI	GTSAC	3 cut(s)	227, 680, 1008
NsiI	ATGCAT	2 cut(s)	585, 1053
NspI	RCATGY	3 cut(s)	681, 1319, 1481
NspV	TTCGAA	1 cut(s)	143
PaeI	GCATGC	1 cut(s)	1481
PagI	TCATGA	1 cut(s)	1933
PaqCI	CACCTGC	1 cut(s)	2128
PasI	CCCWGGG	1 cut(s)	1153
PciI	ACATGT	1 cut(s)	677
PctI	GAATGC	1 cut(s)	1051
PdmI	GAANNNNTTC	2 cut(s)	1593, 1623
PfeI	GAWTC	7 cut(s)	329, 500, 1436, 1594, 1976, 2348, 2621
PflFI	GACNNNGTC	1 cut(s)	24
PflMI	CCANNNNNTGG	1 cut(s)	2465
PkrI	GCNGC	9 cut(s)	34, 207, 274, 667, 1074, 1506, 2182, 2317, 2521
PleI	GAGTC	4 cut(s)	65, 160, 748, 2374
PpsI	GAGTC	4 cut(s)	65, 160, 748, 2374
Ppu21I	YACGTR	1 cut(s)	1840
PpuMI	RGGWCCY	1 cut(s)	816
PscI	ACATGT	1 cut(s)	677
Psp5II	RGGWCCY	1 cut(s)	816
Psp6I	CCWGG	4 cut(s)	475, 1117, 1152, 1780
PspEI	GGTNACC	1 cut(s)	159
PspGI	CCWGG	4 cut(s)	475, 1117, 1152, 1780
PspN4I	GGNNCC	8 cut(s)	8, 792, 817, 818, 1569, 1626, 2091, 2555
PspPI	GGNCC	1 cut(s)	816
PspPPI	RGGWCCY	1 cut(s)	816
PstNI	CAGNNNCTG	1 cut(s)	1772
PsuI	RGATCY	2 cut(s)	2042, 2587
PsyI	GACNNNGTC	1 cut(s)	24
RseI	CAYNNNNRTG	4 cut(s)	267, 1415, 1938, 2599
SaqAI	TTAA	5 cut(s)	312, 1068, 1113, 1290, 1370
SatI	GCNGC	9 cut(s)	33, 206, 273, 666, 1073, 1505, 2181, 2316, 2520
Sau96I	GGNCC	1 cut(s)	816
ScaI	AGTACT	1 cut(s)	2236
SchI	GAGTC	4 cut(s)	66, 161, 749, 2375
ScrFI	CCNGG	5 cut(s)	477, 1119, 1154, 1696, 1782
SexAI	ACCWGGT	1 cut(s)	1780
SfaNI	GCATC	9 cut(s)	259, 570, 833, 1038, 1142, 1255, 1808, 2036, 2422
SfcI	CTRYAG	3 cut(s)	276, 1914, 1959
SfuI	TTCGAA	1 cut(s)	143
SinI	GGWCC	1 cut(s)	816
SmiMI	CAYNNNNRTG	4 cut(s)	267, 1415, 1938, 2599
SmlI	CTYRAG	5 cut(s)	660, 1067, 1076, 2269, 2581
SmoI	CTYRAG	5 cut(s)	660, 1067, 1076, 2269, 2581
SphI	GCATGC	1 cut(s)	1481
SsiI	CCGC	8 cut(s)	33, 203, 1072, 1262, 1565, 1631, 1995, 2529
SspI	AATATT	2 cut(s)	721, 1754
SspMI	CTAG	6 cut(s)	534, 1518, 1544, 1866, 2372, 2544
StyD4I	CCNGG	5 cut(s)	475, 1117, 1152, 1694, 1780
TaaI	ACNGT	9 cut(s)	593, 996, 1719, 1724, 1768, 1861, 2083, 2110, 2653
TaiI	ACGT	3 cut(s)	25, 768, 1842
TaqI	TCGA	5 cut(s)	66, 143, 1204, 1395, 2112
TatI	WGTACW	6 cut(s)	136, 488, 538, 969, 1719, 2234
TauI	GCSGC	2 cut(s)	35, 1075
TfiI	GAWTC	7 cut(s)	329, 500, 1436, 1594, 1976, 2348, 2621
Tru1I	TTAA	5 cut(s)	312, 1068, 1113, 1290, 1370
Tru9I	TTAA	5 cut(s)	312, 1068, 1113, 1290, 1370
TscAI	CASTG	6 cut(s)	423, 1306, 1680, 1882, 1950, 2208
TseFI	GTSAC	3 cut(s)	227, 680, 1008
TseI	GCWGC	7 cut(s)	205, 272, 665, 1504, 2180, 2315, 2519
Tsp45I	GTSAC	3 cut(s)	227, 680, 1008
TspGWI	ACGGA	4 cut(s)	1653, 1773, 1830, 2658
TspRI	CASTG	6 cut(s)	423, 1306, 1680, 1882, 1950, 2208
Tth111I	GACNNNGTC	1 cut(s)	24
Van91I	CCANNNNNTGG	1 cut(s)	2465
Vha464I	CTTAAG	1 cut(s)	1067
VpaK11BI	GGWCC	1 cut(s)	816
XapI	RAATTY	3 cut(s)	283, 340, 480
XceI	RCATGY	3 cut(s)	681, 1319, 1481
XmiI	GTMKAC	1 cut(s)	2301
XmnI	GAANNNNTTC	2 cut(s)	1593, 1623
XspI	CTAG	6 cut(s)	534, 1518, 1544, 1866, 2372, 2544
ZraI	GACGTC	2 cut(s)	23, 766
ZrmI	AGTACT	1 cut(s)	2236
Zsp2I	ATGCAT	2 cut(s)	585, 1053

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.