Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003437.1

Orthogroup ID

OG0006119

Physical Location & Seq

Genomic Coordinates Forward (+)

25252 .. 30475

Gene Structure 5224 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003437.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2886 bp

atggggaaccgaaaagaacgacgtcgtctcgccgccatgtccaactctggtcgcagagtcaagctcgatctcttcgccgaaccccctggaggagatttgggtggctctgctgaacatgagggagtaggaggagaagtacattcgaaaggcgagtctgggttacccaattcaccatcttcttcttcaggtcagcaaccagaaaatccactgcttttacttggccagtatagtgatgaggagttggatgatggctcaaataaaactcttagtgatgctgctgtagagaattcctcgcctcagaataatgatgaggttaagagtgcgcttaatgaattgggccagaatttggacatcataggcggcgatgagcctgcttctcagaaattcaatcaaaaggaagtggatacgaactctgatacactggatcgtgatcagagcatggaagacagtgataaaagagaaaatggtgatctggcccccagggatttccgtacagaagtggatttgacagagaaagtttctttgcctgaaagttctaatgtacaagtcattggtgataagaaattcaatcaaaaggaagtggatacgaactctgatacactggatcgtgatcagagcatggaagacagtgataaaagagaaaatggtgatctggtccccagggatttccgtacagaagtggatttgacagagaaagtttctttgcctgaaagttctaatgtacaagtcattggtgatgtcagttcaggttggaagattgtgatgcatgaagaaagtaaaagctattattactggaatactgaaactggggaaacttcatgggaagtgcctgatgttttggctcaagcaaccaagttaacctgtgaccagccttctgttgatgaaaagccagagaatgtacctgtaggtacacaagagcattctaattctgacgtgattgaagggtcttccaatatggttcctcagggcatatatggggatgggtcccagatgaatgactggaatctaggatgccataatggatcagagattgatccctcttctcatcttgtaaaatatacggaggctttgttagagagattgaagttgctacaacggtccaaggatcaagtgcaaggcgttgactggatcacaaagtacattttggaagttgaaattagactgtttgatttgaagtcacttttttcctatgggtcatctctgcttccattctggatgcattctgaaatacagcttaagcggcttgagagtggtattaatgatgaaatgtccaacattgttaagtctggagaatcaaatgaagttgaggcatctcatacatcattctcccagggagaaataaatgtcccggaaagcatggggtctaaaactgaagtagatcgagcagaaaataagcaacttatgtcctctctaaatgattatcagggttctcttagtgcggatacagtcaatgaagatcaagaagttaaagactccattgtaaaaaatgagcatgtttctgcaattggctccccaagtagacatatggaggttggtgcaagtgaacaagtccatgggatagtagttcctgatgagtcaactattaagaatgatgtttgtgctgtggaagatgttgacatggatgtggacatggaagttgaagattcaaatccagcaggaaatacagctatttcttatgcattgcatgcccaggagttcactgcaacagaacagccaaatcagtctagtccaccttccctatatacatcgctagtttcagaggatactttcgcggttcgacctcctccagatgaggaatggattcctccacccccacctgataatgaacaggttcctccgcctccacctgatgagccaccacctgaacctccatatcctccacttccgtcttactctgagacaggacaacctccctatgcagaacagtatagttactcctatccagttcccagttttgaatattatggacatgcagttactgaagcacctggtgctaattattatggacacactgaaggatgtcaagttgctataccccacgtaccagtttactatggtgcagttcctagcacctacactgaaaatgctcaggttgtggcaaatcctgttgcgcctgtcacatattatgggcttcaagatggaacagtacctgccgcacctgtagtcagtagtgtagactcacaatttcccagtggggctgttcctcttagctctgacaaccttgcatctgatcaccctagatctatcaactcatttgaagaagtaggcagcagtggttcaactgtgcaggctccatctacctcagccacagtccaagcatctgcaactattatggaaaaagatactattgttccattaactaattcggtctctactgctgcacctattccggctacatcagtggttgcgaaggttcaatcaaaagtagtacgtactaaaaagcggacaatcccagcttcttcttccttgaggtctaataagaaagtctccagtttggtagacaagtggaaagcagcgaaagaggagttgcttgaagatgaggaggaacctgagaatacatatgagttgctagagaggaagcgacaaagggaaatagaggaatggtattcacaacaaattacgagtggagaggccaaagataatgctaattttcaacctttgggcggcaattggcgtgagaaggtgaagcgaagaaaggctcagttagcccgtgaagctgcacagactgcacctgaagcacctagtaatgggaaccagcagcccaatctaacagaactttcaagggatctgccctctggatggcaggtttactgggatgaatcatcgaagcaggtttattacggaaatactgtaacctcagaaactacttggacgagaccaaaatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0016604 GO:0016607 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0070013

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

961

Amino Acids

105.45

Weight (kDa)

4.48

Isoelectric Point (pI)

52.67

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006119)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G13225 AT3G13225 AT3G13225
fragaria_vesca	FvH4_3g42241 FvH4_3g42241 FvH4_3g42241 FvH4_3g42241 FvH4_3g42241 FvH4_3g42241 FvH4_3g42241
malus_domestica	MD03G1035400.v1.1 MD11G1037100.v1.1
prunus_persica	Prupe.6G028400_v2.0.a1 Prupe.6G028400_v2.0.a1
pyrus_communis	pycom03g02760 pycom11g03080
rosa_chinensis	RchiOBHm_Chr5g0075571
rosa_laevigata	RLG00000036576
rosa_multiflora	Rmu_sc0003437.1_g000006
rosa_roxburghii	Rroxscaffold_1G00006000
rosa_rugosa	Rorug05G0440600 Rorug05G0440700
rosa_samantha	Rh5AG497800 Rh5BG518600 Rh5CG542300 Rh5DG530500
rosa_wichuraiana	Rw5G046140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	25
Acc36I	ACCTGC	3 cut(s)	2158, 2794, 2821
AccB7I	CCANNNNNTGG	1 cut(s)	346
AccI	GTMKAC	3 cut(s)	1519, 2175, 2499
AccII	CGCG	1 cut(s)	1772
AciI	CCGC	9 cut(s)	33, 360, 1240, 1439, 1772, 1838, 2154, 2443, 2664
AclWI	GGATC	7 cut(s)	432, 612, 1028, 1030, 1113, 1136, 2793
AcoI	YGGCCR	1 cut(s)	220
AcsI	RAATTY	4 cut(s)	286, 343, 383, 563
AcuI	CTGAAG	5 cut(s)	168, 1392, 2001, 2034, 2754
AcyI	GRCGYC	1 cut(s)	22
AdeI	CACNNNGTG	1 cut(s)	1991
AfiI	CCNNNNNNNGG	5 cut(s)	89, 346, 2663, 2747, 2799
AflII	CTTAAG	1 cut(s)	1235
AjiI	CACGTC	1 cut(s)	934
AjnI	CCWGG	6 cut(s)	85, 479, 659, 1329, 1689, 1987
AluBI	AGCT	7 cut(s)	64, 783, 1234, 1667, 2211, 2456, 2717
AluI	AGCT	7 cut(s)	64, 783, 1234, 1667, 2211, 2456, 2717
Alw26I	GTCTC	5 cut(s)	32, 1892, 2374, 2491, 2869
AlwI	GGATC	7 cut(s)	432, 612, 1028, 1030, 1113, 1136, 2793
AlwNI	CAGNNNCTG	2 cut(s)	1979, 2150
AoxI	GGCC	4 cut(s)	220, 337, 474, 2631
ApeKI	GCWGC	6 cut(s)	275, 2268, 2378, 2513, 2717, 2758
ApoI	RAATTY	4 cut(s)	286, 343, 383, 563
ArsI	GACNNNNNNTTYG	2 cut(s)	137, 169
AseI	ATTAAT	1 cut(s)	1257
Asp700I	GAANNNNTTC	2 cut(s)	1800, 1830
AspLEI	GCGC	2 cut(s)	325, 2113
AspS9I	GGNCC	5 cut(s)	337, 475, 655, 984, 1098
AsuC2I	CCSGG	1 cut(s)	1349
AsuHPI	GGTGA	7 cut(s)	162, 479, 566, 659, 746, 2225, 2695
AsuII	TTCGAA	1 cut(s)	143
AvaII	GGWCC	3 cut(s)	655, 984, 1098
AxyI	CCTNAGG	1 cut(s)	963
BaeI	ACNNNNGTAYC	2 cut(s)	2334, 2367
BalI	TGGCCA	1 cut(s)	222
BbsI	GAAGAC	3 cut(s)	450, 630, 939
BbvCI	CCTCAGC	1 cut(s)	2302
BbvI	GCAGC	6 cut(s)	262, 2280, 2365, 2525, 2704, 2770
BccI	CCATC	6 cut(s)	181, 242, 974, 2132, 2302, 2793
BcgI	CGANNNNNNTGC	2 cut(s)	353, 387
BciT130I	CCWGG	6 cut(s)	87, 481, 661, 1331, 1691, 1989
BciVI	GTATCC	4 cut(s)	397, 577, 1435, 1756
BclI	TGATCA	3 cut(s)	430, 610, 2230
BcnI	CCSGG	1 cut(s)	1349
BcoDI	GTCTC	5 cut(s)	32, 1892, 2374, 2491, 2869
BfaI	CTAG	7 cut(s)	1007, 1725, 1751, 2067, 2238, 2570, 2742
BfmI	CTRYAG	3 cut(s)	279, 903, 2160
BfrI	CTTAAG	1 cut(s)	1235
BfuAI	ACCTGC	3 cut(s)	2158, 2794, 2821
BfuI	GTATCC	4 cut(s)	397, 577, 1435, 1756
BglII	AGATCT	1 cut(s)	2240
Bme1390I	CCNGG	7 cut(s)	87, 481, 661, 1331, 1349, 1691, 1989
Bme18I	GGWCC	3 cut(s)	655, 984, 1098
BmgBI	CACGTC	1 cut(s)	934
BmgT120I	GGNCC	5 cut(s)	337, 475, 655, 984, 1098
BmrFI	CCNGG	7 cut(s)	87, 481, 661, 1331, 1349, 1691, 1989
BmrI	ACTGGG	4 cut(s)	816, 1944, 2184, 2821
BmsI	GCATC	7 cut(s)	262, 753, 1001, 1206, 1319, 2234, 2327
BmuI	ACTGGG	4 cut(s)	816, 1944, 2184, 2821
BpiI	GAAGAC	3 cut(s)	450, 630, 939
BplI	GAGNNNNNCTC	4 cut(s)	48, 80, 275, 307
BpmI	CTGGAG	4 cut(s)	108, 1308, 1770, 2473
Bpu10I	CCTNAGC	2 cut(s)	2088, 2302
Bpu14I	TTCGAA	1 cut(s)	143
BpuEI	CTTGAG	3 cut(s)	828, 1265, 2488
BpuMI	CCSGG	1 cut(s)	1349
BsaAI	YACGTR	2 cut(s)	2041, 2432
BsaBI	GATNNNNATC	3 cut(s)	429, 609, 1647
BsaHI	GRCGYC	1 cut(s)	22
BsaI	GGTCTC	2 cut(s)	2374, 2869
BsaXI	ACNNNNNCTCC	4 cut(s)	120, 150, 1055, 1085
Bsc4I	CCNNNNNNNGG	5 cut(s)	89, 346, 2663, 2747, 2799
Bse21I	CCTNAGG	1 cut(s)	963
Bse3DI	GCAATG	1 cut(s)	1679
Bse8I	GATNNNNATC	3 cut(s)	429, 609, 1647
BseBI	CCWGG	6 cut(s)	87, 481, 661, 1331, 1691, 1989
BseGI	GGATG	8 cut(s)	250, 985, 1016, 1221, 1627, 2024, 2804, 2821
BseJI	GATNNNNATC	3 cut(s)	429, 609, 1647
BseLI	CCNNNNNNNGG	5 cut(s)	89, 346, 2663, 2747, 2799
BseMI	GCAATG	1 cut(s)	1679
BseMII	CTCAG	9 cut(s)	311, 392, 977, 1887, 2102, 2316, 2541, 2714, 2871
BseRI	GAGGAG	6 cut(s)	105, 144, 251, 1773, 2537, 2555
BseXI	GCAGC	6 cut(s)	262, 2280, 2365, 2525, 2704, 2770
BseYI	CCCAGC	1 cut(s)	2452
BsgI	GTGCAG	5 cut(s)	2079, 2306, 2364, 2703, 2712
Bsh1236I	CGCG	1 cut(s)	1772
BshFI	GGCC	4 cut(s)	222, 339, 476, 2633
BsiSI	CCGG	2 cut(s)	1349, 2390
BslFI	GGGAC	3 cut(s)	641, 970, 1331
BslI	CCNNNNNNNGG	5 cut(s)	89, 346, 2663, 2747, 2799
BsmAI	GTCTC	5 cut(s)	32, 1892, 2374, 2491, 2869
BsmBI	CGTCTC	1 cut(s)	32
BsmFI	GGGAC	3 cut(s)	641, 970, 1331
BsmI	GAATGC	2 cut(s)	919, 1219
BsnI	GGCC	4 cut(s)	222, 339, 476, 2633
Bso31I	GGTCTC	2 cut(s)	2374, 2869
Bsp119I	TTCGAA	1 cut(s)	143
Bsp1407I	TGTACA	2 cut(s)	541, 721
Bsp19I	CCATGG	1 cut(s)	1552
BspACI	CCGC	9 cut(s)	33, 360, 1240, 1439, 1772, 1838, 2154, 2443, 2664
BspANI	GGCC	4 cut(s)	222, 339, 476, 2633
BspCNI	CTCAG	9 cut(s)	310, 391, 976, 1888, 2101, 2315, 2542, 2713, 2870
BspFNI	CGCG	1 cut(s)	1772
BspMI	ACCTGC	3 cut(s)	2158, 2794, 2821
BspPI	GGATC	7 cut(s)	432, 612, 1028, 1030, 1113, 1136, 2793
BspT104I	TTCGAA	1 cut(s)	143
BspTI	CTTAAG	1 cut(s)	1235
BspTNI	GGTCTC	2 cut(s)	2374, 2869
BsrDI	GCAATG	1 cut(s)	1679
BsrGI	TGTACA	2 cut(s)	541, 721
BssNI	GRCGYC	1 cut(s)	22
BssT1I	CCWWGG	2 cut(s)	1101, 1552
Bst2UI	CCWGG	6 cut(s)	87, 481, 661, 1331, 1691, 1989
Bst6I	CTCTTC	2 cut(s)	77, 1045
BstACI	GRCGYC	1 cut(s)	22
BstAFI	CTTAAG	1 cut(s)	1235
BstAPI	GCANNNNNTGC	3 cut(s)	1685, 1991, 2726
BstAUI	TGTACA	2 cut(s)	541, 721
BstBAI	YACGTR	2 cut(s)	2041, 2432
BstBI	TTCGAA	1 cut(s)	143
BstC8I	GCNNGC	3 cut(s)	372, 1686, 2289
BstDSI	CCRYGG	1 cut(s)	1552
BstEII	GGTNACC	1 cut(s)	159
BstF5I	GGATG	8 cut(s)	250, 985, 1016, 1221, 1627, 2024, 2804, 2821
BstFNI	CGCG	1 cut(s)	1772
BstHHI	GCGC	2 cut(s)	325, 2113
BstMAI	GTCTC	5 cut(s)	32, 1892, 2374, 2491, 2869
BstMWI	GCNNNNNNNGC	7 cut(s)	1240, 1685, 1991, 2705, 2714, 2726, 2735
BstNI	CCWGG	6 cut(s)	87, 481, 661, 1331, 1691, 1989
BstNSI	RCATGY	3 cut(s)	1496, 1688, 1973
BstPI	GGTNACC	1 cut(s)	159
BstSCI	CCNGG	7 cut(s)	85, 479, 659, 1329, 1347, 1689, 1987
BstSFI	CTRYAG	3 cut(s)	279, 903, 2160
BstSNI	TACGTA	1 cut(s)	2432
BstUI	CGCG	1 cut(s)	1772
BstV1I	GCAGC	6 cut(s)	262, 2280, 2365, 2525, 2704, 2770
BstV2I	GAAGAC	3 cut(s)	450, 630, 939
BstX2I	RGATCY	2 cut(s)	2240, 2785
BstYI	RGATCY	2 cut(s)	2240, 2785
Bsu36I	CCTNAGG	1 cut(s)	963
BsuI	GTATCC	4 cut(s)	397, 577, 1435, 1756
BsuRI	GGCC	4 cut(s)	222, 339, 476, 2633
BtgI	CCRYGG	1 cut(s)	1552
BtgZI	GCGATG	2 cut(s)	378, 1731
BtrI	CACGTC	1 cut(s)	934
BtsCI	GGATG	8 cut(s)	250, 985, 1016, 1221, 1627, 2024, 2804, 2821
BtsI	GCAGTG	3 cut(s)	206, 1698, 2278
BveI	ACCTGC	3 cut(s)	2158, 2794, 2821
Cac8I	GCNNGC	3 cut(s)	372, 1686, 2289
CaiI	CAGNNNCTG	2 cut(s)	1979, 2150
CfoI	GCGC	2 cut(s)	325, 2113
Cfr13I	GGNCC	5 cut(s)	337, 475, 655, 984, 1098
CsiI	ACCWGGT	1 cut(s)	1987
DraIII	CACNNNGTG	1 cut(s)	1991
EaeI	YGGCCR	1 cut(s)	220
Eam1104I	CTCTTC	2 cut(s)	77, 1045
EarI	CTCTTC	2 cut(s)	77, 1045
EciI	GGCGGA	1 cut(s)	1827
Eco105I	TACGTA	1 cut(s)	2432
Eco130I	CCWWGG	2 cut(s)	1101, 1552
Eco31I	GGTCTC	2 cut(s)	2374, 2869
Eco47I	GGWCC	3 cut(s)	655, 984, 1098
Eco57I	CTGAAG	5 cut(s)	168, 1392, 2001, 2034, 2754
Eco81I	CCTNAGG	1 cut(s)	963
Eco91I	GGTNACC	1 cut(s)	159
EcoO109I	RGGNCCY	1 cut(s)	984
EcoO65I	GGTNACC	1 cut(s)	159
EcoRI	GAATTC	1 cut(s)	286
EcoRII	CCWGG	6 cut(s)	85, 479, 659, 1329, 1689, 1987
EcoT14I	CCWWGG	2 cut(s)	1101, 1552
EcoT22I	ATGCAT	3 cut(s)	768, 1221, 1681
ErhI	CCWWGG	2 cut(s)	1101, 1552
Esp3I	CGTCTC	1 cut(s)	32
FaqI	GGGAC	3 cut(s)	641, 970, 1331
FauNDI	CATATG	2 cut(s)	1524, 2560
FbaI	TGATCA	3 cut(s)	430, 610, 2230
FblI	GTMKAC	3 cut(s)	1519, 2175, 2499
FokI	GGATG	8 cut(s)	257, 992, 1023, 1228, 1634, 2031, 2811, 2828
FspBI	CTAG	7 cut(s)	1007, 1725, 1751, 2067, 2238, 2570, 2742
GlaI	GCGC	2 cut(s)	324, 2112
GsaI	CCCAGC	1 cut(s)	2456
GsuI	CTGGAG	4 cut(s)	108, 1308, 1770, 2473
HaeIII	GGCC	4 cut(s)	222, 339, 476, 2633
HapII	CCGG	2 cut(s)	1349, 2390
HhaI	GCGC	2 cut(s)	325, 2113
Hin1I	GRCGYC	1 cut(s)	22
Hin6I	GCGC	2 cut(s)	323, 2111
HinP1I	GCGC	2 cut(s)	323, 2111
HincII	GTYRAC	4 cut(s)	858, 1123, 1578, 1615
HindII	GTYRAC	4 cut(s)	858, 1123, 1578, 1615
HpaI	GTTAAC	1 cut(s)	858
HpaII	CCGG	2 cut(s)	1349, 2390
HphI	GGTGA	7 cut(s)	162, 479, 566, 659, 746, 2225, 2695
Hpy188III	TCNNGA	9 cut(s)	428, 608, 1213, 1287, 1460, 1568, 1787, 2135, 2796
Hpy99I	CGWCG	2 cut(s)	24, 27
HpyAV	CCTTC	6 cut(s)	882, 935, 1743, 2009, 2404, 2674
HpyCH4IV	ACGT	4 cut(s)	22, 933, 2040, 2431
HpyF10VI	GCNNNNNNNGC	7 cut(s)	1240, 1685, 1991, 2705, 2714, 2726, 2735
HpySE526I	ACGT	4 cut(s)	22, 933, 2040, 2431
Hsp92I	GRCGYC	1 cut(s)	22
HspAI	GCGC	2 cut(s)	323, 2111
KflI	GGGWCCC	1 cut(s)	984
Ksp22I	TGATCA	3 cut(s)	430, 610, 2230
KspAI	GTTAAC	1 cut(s)	858
LmnI	GCTCC	2 cut(s)	1514, 2296
Lsp1109I	GCAGC	6 cut(s)	262, 2280, 2365, 2525, 2704, 2770
LweI	GCATC	7 cut(s)	262, 753, 1001, 1206, 1319, 2234, 2327
MabI	ACCWGGT	1 cut(s)	1987
MaeI	CTAG	7 cut(s)	1007, 1725, 1751, 2067, 2238, 2570, 2742
MaeII	ACGT	4 cut(s)	22, 933, 2040, 2431
MaeIII	GTNAC	7 cut(s)	159, 863, 1176, 1931, 1975, 2116, 2851
MfeI	CAATTG	2 cut(s)	1503, 2668
MflI	RGATCY	2 cut(s)	2240, 2785
MlsI	TGGCCA	1 cut(s)	222
MluNI	TGGCCA	1 cut(s)	222
MlyI	GAGTC	5 cut(s)	66, 161, 1466, 1583, 2171
MmeI	TCCRAC	4 cut(s)	66, 222, 731, 1296
Mox20I	TGGCCA	1 cut(s)	222
Mph1103I	ATGCAT	3 cut(s)	768, 1221, 1681
MroXI	GAANNNNTTC	2 cut(s)	1800, 1830
MscI	TGGCCA	1 cut(s)	222
MseI	TTAA	9 cut(s)	315, 327, 857, 1236, 1257, 1281, 1467, 1584, 2357
MslI	CAYNNNNRTG	1 cut(s)	1622
Msp20I	TGGCCA	1 cut(s)	222
MspCI	CTTAAG	1 cut(s)	1235
MspI	CCGG	2 cut(s)	1349, 2390
MspR9I	CCNGG	7 cut(s)	87, 481, 661, 1331, 1349, 1691, 1989
MunI	CAATTG	2 cut(s)	1503, 2668
Mva1269I	GAATGC	2 cut(s)	919, 1219
MvaI	CCWGG	6 cut(s)	87, 481, 661, 1331, 1691, 1989
MvnI	CGCG	1 cut(s)	1772
MwoI	GCNNNNNNNGC	7 cut(s)	1240, 1685, 1991, 2705, 2714, 2726, 2735
NciI	CCSGG	1 cut(s)	1349
NcoI	CCATGG	1 cut(s)	1552
NdeI	CATATG	2 cut(s)	1524, 2560
NmuCI	GTSAC	3 cut(s)	863, 1176, 2116
NsiI	ATGCAT	3 cut(s)	768, 1221, 1681
NspI	RCATGY	3 cut(s)	1496, 1688, 1973
NspV	TTCGAA	1 cut(s)	143
PaeI	GCATGC	1 cut(s)	1688
PasI	CCCWGGG	3 cut(s)	480, 660, 1330
PctI	GAATGC	2 cut(s)	919, 1219
PdmI	GAANNNNTTC	2 cut(s)	1800, 1830
PfeI	GAWTC	5 cut(s)	1003, 1292, 1643, 1801, 2819
PflFI	GACNNNGTC	1 cut(s)	24
PflMI	CCANNNNNTGG	1 cut(s)	346
PfoI	TCCNGGA	1 cut(s)	1347
PleI	GAGTC	5 cut(s)	65, 160, 1466, 1582, 2171
PpsI	GAGTC	5 cut(s)	65, 160, 1466, 1582, 2171
Ppu21I	YACGTR	2 cut(s)	2041, 2432
PpuMI	RGGWCCY	1 cut(s)	984
PshBI	ATTAAT	1 cut(s)	1257
Psp5II	RGGWCCY	1 cut(s)	984
Psp6I	CCWGG	6 cut(s)	85, 479, 659, 1329, 1689, 1987
PspEI	GGTNACC	1 cut(s)	159
PspFI	CCCAGC	1 cut(s)	2452
PspGI	CCWGG	6 cut(s)	85, 479, 659, 1329, 1689, 1987
PspPI	GGNCC	5 cut(s)	337, 475, 655, 984, 1098
PspPPI	RGGWCCY	1 cut(s)	984
PstNI	CAGNNNCTG	2 cut(s)	1979, 2150
PsuI	RGATCY	2 cut(s)	2240, 2785
PsyI	GACNNNGTC	1 cut(s)	24
RseI	CAYNNNNRTG	1 cut(s)	1622
SaqAI	TTAA	9 cut(s)	315, 327, 857, 1236, 1257, 1281, 1467, 1584, 2357
Sau96I	GGNCC	5 cut(s)	337, 475, 655, 984, 1098
SchI	GAGTC	5 cut(s)	66, 161, 1466, 1583, 2171
ScrFI	CCNGG	7 cut(s)	87, 481, 661, 1331, 1349, 1691, 1989
SexAI	ACCWGGT	1 cut(s)	1987
SfaNI	GCATC	7 cut(s)	262, 753, 1001, 1206, 1319, 2234, 2327
SfcI	CTRYAG	3 cut(s)	279, 903, 2160
SfuI	TTCGAA	1 cut(s)	143
SinI	GGWCC	3 cut(s)	655, 984, 1098
SmiMI	CAYNNNNRTG	1 cut(s)	1622
SmlI	CTYRAG	4 cut(s)	843, 1235, 1244, 2467
SmoI	CTYRAG	4 cut(s)	843, 1235, 1244, 2467
SnaBI	TACGTA	1 cut(s)	2432
SphI	GCATGC	1 cut(s)	1688
SsiI	CCGC	9 cut(s)	33, 360, 1240, 1439, 1772, 1838, 2154, 2443, 2664
SspI	AATATT	1 cut(s)	1961
SspMI	CTAG	7 cut(s)	1007, 1725, 1751, 2067, 2238, 2570, 2742
StyD4I	CCNGG	7 cut(s)	85, 479, 659, 1329, 1347, 1689, 1987
StyI	CCWWGG	2 cut(s)	1101, 1552
TaiI	ACGT	4 cut(s)	25, 936, 2043, 2434
TaqI	TCGA	5 cut(s)	66, 143, 1381, 1777, 2825
TaqII	GACCGA	1 cut(s)	2356
TatI	WGTACW	4 cut(s)	136, 541, 721, 1137
TauI	GCSGC	5 cut(s)	35, 363, 1243, 2156, 2667
TfiI	GAWTC	5 cut(s)	1003, 1292, 1643, 1801, 2819
Tru1I	TTAA	9 cut(s)	315, 327, 857, 1236, 1257, 1281, 1467, 1584, 2357
Tru9I	TTAA	9 cut(s)	315, 327, 857, 1236, 1257, 1281, 1467, 1584, 2357
TseFI	GTSAC	3 cut(s)	863, 1176, 2116
TseI	GCWGC	6 cut(s)	275, 2268, 2378, 2513, 2717, 2758
Tsp45I	GTSAC	3 cut(s)	863, 1176, 2116
TspGWI	ACGGA	5 cut(s)	479, 659, 1076, 1875, 2856
Tth111I	GACNNNGTC	1 cut(s)	24
Van91I	CCANNNNNTGG	1 cut(s)	346
Vha464I	CTTAAG	1 cut(s)	1235
VpaK11BI	GGWCC	3 cut(s)	655, 984, 1098
VspI	ATTAAT	1 cut(s)	1257
XapI	RAATTY	4 cut(s)	286, 343, 383, 563
XceI	RCATGY	3 cut(s)	1496, 1688, 1973
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1794
XmiI	GTMKAC	3 cut(s)	1519, 2175, 2499
XmnI	GAANNNNTTC	2 cut(s)	1800, 1830
XspI	CTAG	7 cut(s)	1007, 1725, 1751, 2067, 2238, 2570, 2742
ZraI	GACGTC	1 cut(s)	23
Zsp2I	ATGCAT	3 cut(s)	768, 1221, 1681

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.