Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0006119

Physical Location & Seq

Genomic Coordinates Reverse (-)

2118112 .. 2123097

Gene Structure 4986 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g02760.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2799 bp

ATGGGGAAGAGAAAAGAGCGTCGTCTTGCAGCTAAGACCAACGCTGGTCGCAGAGTCAAGCTCGATCTCTTCGCGGAACCCTCCGGAGATTTGGGTGGCTCTGCAGAACACAATGAACATGGAGAAGATACTAAATCCAAAGGCCATGCTGGGGTACCCAATTCACCATCTTCTTCAGGTCAGAATTTACAAAATCCACTGCTGTTACTTGGGCAATATAGTGATGACGATTTGGATGATGATTCAAATCATAGCGATGTTTCTGCAGAAAATTCCTCGCCTGACAAAAGCGATGAGGTTAAGAGTTCGCTTGGTGAATCTCGTCAGCATTTGGATGCCAATGCTTGTGAAGACATTGCTTCTCAGAAGGTTGAGAAACAGGGAGGTAATGCAAATTCTGCCCAGCAAGATTGTGAGCAGAACATGGACCACAGTGATAAAAGAGAGAATGATGATATCGTCTCTAGTGATTTACGTACAGAATTGGATTTGAAGCAACAGATCTCTGTTCCTGAAACCTCAAGCGTACAAGTCATTGGAGATGTTAGTTCAGGTTGGAAGATTGTGATGCATGAAGAGAGTAATAACTATTATTACTGGAATACTGAAACTGGGGAAACTTCATGGGAAGTCCCTGATGTTTTGGCCCAGGAAACGAAGTTAAGTGACCAGGAAATGCCTACTACTGTTGGAACAACAGATAATGCTACTGGTGGTGCAGAAGAGTCTAACTTAGCTTCTGATGTGAAGTTAGATGGTTTCTCTAATTCTGTCACAATTGAAGGGGATGCCAATATGATCCCTCATGGAATAGAATCACACGGACATGTGTCACAAATTGACAAGTGGAATCTAGAATTCAATAAAGGAGCCACTCACGATACAATGGCTAATGAAGATTATGAATCAGCGATTGCTCTCTCCTCTGGTCTTATCAAACATTGTGAAACATTATTAGGAAGATTGAAGTCACTGCAAGGGTCGAAGGACCTGCTGCCAGGTCTCAACTGGATCTCAAAGTACACTATGGAAGTTGAGATAAGGCTATTTGATATTAAGTCTCTTTTATCTCACGGTTCATCTCTGCTTCCATTTTGGATGCACTCTGAAAGACAACTTAAACAACTAGAGAGTGCTCTTGACGATGAAACGTCCAAGATTGTTAAATCTCTACAGTCGAATGATACTGAGGGAACTAATCCATCTTTCTCCGAGGCTAACAACAATTTTCAGGAAAAAGAGGGGTATAAAACTGAAGTAGATCAAGTTGGTACTCTGGATGATCATCATGTTACTCCTATTATTGATACATCAGCAATAGTTTCTAAAGATCAAGATGTTAAAAATTCTGGTGCAAATGCTGAGCATGTGTCTGCGTCTGGCTCTCCTACTAGACATATGGATAGTGGCGCAAGTGAACAAGTCAATGAGGTGGTAGTTCCCTATGAGTCGACTACCAAAAATGAGTTTTGTGGTGGGGAAGAGGTTGACATGGATGTGGACATGGAAGTTGAAGAGTCAAACTATGCAGGAGATACAACTATTGAATATGCATTGAATTCCAAGGAGTTTGCTCGACCGGAGCAGCCAATTCATCCAAGTCCACCTTCAATATACACATCTTTAGTGTCAGAGGATACGTTCGCCATTCCACCTCCCCCAGATGAGGAATGGATTCCCCCACCACCACCTGATAATGAAGAAATTCCTCCGCCCCCACCTGATGAGCCCCCATATTCTTCTCATCCATCTTACCCTGAGACAGTGCAACCTCCTTATGCAGAGCAATACAATTATTCATATCCAGCTTCCAGTTTTGGGTATTACGGACATACCGCCACTGAAGCTCCTAACACTAATTTTTATGGACATCCTGAAGGATCCCAACTAGTTATACCCCAGGCACCACTTTACTATGGTGCAGTTCCTAGCACCTACATGGAAACTGCTCAGGTTGCAGTTAACCCTGTCGAGTCTGTCACATATTATGGGCTTCAAGATGGCACAGGACCTGCTGCTCCTGTGGTCAGTAGTGTAGAGCCCTTGCAGTTTCACAGCGAGTCTGCTCCTCTAAGCTATGAAAACCTGGCATCTGATCAGACTGGATCCGTCAACTCCTATTCAGGAGCAGGCAGCAGCGCTTCAAACGTGAATACTGAGCATTTTTCTGTTGATAGTGGGAATGATGGGGGATCTATCGAGGTTCCTTCTACCACAGCCACGGTTCAAGCACCTGCAACTGTTTCTTTGCCATCAACTAATTCTGTTCCTACTGCCGCATCTATTTCTGCCACATCAGTGGCTACCAAGGTTCAATCTAAAGTTCCACGAACGAAAAAGCGAACAATTGCAGTTGCTTCCTCCTTGAGGTCTAATAAGAAAGTCTCCAGTTTAGTAGACAAGTGGAAAGCAGCAAAAGAGGAGTTGCTTGAAGACGAGGAGGAACCTGAAAATGCATATGAGTTGTTGGAGAGGAAGCGACAAAGGGGAATAGAGGAATGGTACGCACAACAAATTACTAGTGGAGAGGCCAAAGATAATGCCAATTTTCAGCCTCTGGGTGGCGATTGGCGTGAGAAAGTGAAGCGAAGAAAAGCTCAATTAGACCGTGAAGCTGCAAAAACCGCAGCAGCATCTACATCTGGGGCTCCTACCGATGGGAACCAGCAGCCTGATATGACCGAACAATCAAACGGTCTCCCACCCGGATGGCAGGCCTACTGGGACGAATCCTCAAAGAAGGTTTACTATGGAAATACCGGGACATCGGAAACTACATGGACGAAACCAACAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0016604 GO:0016607 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0070013

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

933

Amino Acids

101.35

Weight (kDa)

4.56

Isoelectric Point (pI)

48.04

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006119)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G13225 AT3G13225 AT3G13225
fragaria_vesca	FvH4_3g42241 FvH4_3g42241 FvH4_3g42241 FvH4_3g42241 FvH4_3g42241 FvH4_3g42241 FvH4_3g42241
malus_domestica	MD03G1035400.v1.1 MD11G1037100.v1.1
prunus_persica	Prupe.6G028400_v2.0.a1 Prupe.6G028400_v2.0.a1
pyrus_communis	pycom03g02760 pycom11g03080
rosa_chinensis	RchiOBHm_Chr5g0075571
rosa_laevigata	RLG00000036576
rosa_multiflora	Rmu_sc0003437.1_g000006
rosa_roxburghii	Rroxscaffold_1G00006000
rosa_rugosa	Rorug05G0440600 Rorug05G0440700
rosa_samantha	Rh5AG497800 Rh5BG518600 Rh5CG542300 Rh5DG530500
rosa_wichuraiana	Rw5G046140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2242
Acc36I	ACCTGC	3 cut(s)	999, 2020, 2242
Acc65I	GGTACC	1 cut(s)	154
AccB1I	GGYRCC	2 cut(s)	154, 1903
AccI	GTMKAC	2 cut(s)	1451, 2397
AccII	CGCG	1 cut(s)	74
AccIII	TCCGGA	1 cut(s)	83
AciI	CCGC	5 cut(s)	74, 1712, 1836, 2277, 2625
AclWI	GGATC	7 cut(s)	793, 1019, 1875, 1888, 2100, 2113, 2200
AcsI	RAATTY	7 cut(s)	184, 271, 394, 857, 1345, 1558, 1704
AcuI	CTGAAG	4 cut(s)	159, 1275, 1863, 1896
AfaI	GTAC	6 cut(s)	156, 478, 528, 1022, 1273, 2504
AfeI	AGCGCT	1 cut(s)	2140
AfiI	CCNNNNNNNGG	6 cut(s)	151, 1666, 1818, 2367, 2561, 2657
AflIII	ACRYGT	1 cut(s)	826
AhlI	ACTAGT	2 cut(s)	1888, 2519
AjnI	CCWGG	5 cut(s)	648, 669, 997, 1899, 2085
AjuI	GAANNNNNNNTTGG	2 cut(s)	1591, 1623
AleI	CACNNNNGTG	1 cut(s)	2297
AluBI	AGCT	8 cut(s)	32, 61, 737, 1808, 1847, 2076, 2597, 2615
AluI	AGCT	8 cut(s)	32, 61, 737, 1808, 1847, 2076, 2597, 2615
Alw21I	GWGCWC	1 cut(s)	1138
Alw26I	GTCTC	6 cut(s)	466, 1007, 1065, 1754, 2389, 2702
AlwI	GGATC	7 cut(s)	793, 1019, 1875, 1888, 2100, 2113, 2200
AlwNI	CAGNNNCTG	2 cut(s)	2012, 2557
Aor13HI	TCCGGA	1 cut(s)	83
Aor51HI	AGCGCT	1 cut(s)	2140
AoxI	GGCC	4 cut(s)	142, 645, 2529, 2715
ApoI	RAATTY	7 cut(s)	184, 271, 394, 857, 1345, 1558, 1704
Asp700I	GAANNNNTTC	2 cut(s)	1674, 1704
Asp718I	GGTACC	1 cut(s)	154
AspLEI	GCGC	2 cut(s)	1412, 2141
AspS9I	GGNCC	4 cut(s)	427, 646, 988, 2009
AsuC2I	CCSGG	2 cut(s)	2706, 2761
AsuHPI	GGTGA	2 cut(s)	156, 326
AvaII	GGWCC	3 cut(s)	427, 988, 2009
BamHI	GGATCC	2 cut(s)	1880, 2105
BanI	GGYRCC	2 cut(s)	154, 1903
BanII	GRGCYC	3 cut(s)	1731, 2043, 2650
BbsI	GAAGAC	2 cut(s)	357, 2439
Bbv12I	GWGCWC	1 cut(s)	1138
BccI	CCATC	9 cut(s)	175, 749, 1210, 1756, 1994, 2180, 2260, 2651, 2703
BcgI	CGANNNNNNTGC	4 cut(s)	245, 279, 973, 1007
BciT130I	CCWGG	5 cut(s)	650, 671, 999, 1901, 2087
BciVI	GTATCC	1 cut(s)	1630
BclI	TGATCA	2 cut(s)	1282, 2095
BcnI	CCSGG	2 cut(s)	2706, 2761
BcoDI	GTCTC	6 cut(s)	466, 1007, 1065, 1754, 2389, 2702
BcuI	ACTAGT	2 cut(s)	1888, 2519
BfaI	CTAG	7 cut(s)	465, 854, 1127, 1392, 1889, 1929, 2520
BfmI	CTRYAG	3 cut(s)	102, 264, 1172
BfoI	RGCGCY	1 cut(s)	2142
BfuAI	ACCTGC	3 cut(s)	999, 2020, 2242
BfuI	GTATCC	1 cut(s)	1630
BglII	AGATCT	1 cut(s)	501
BlpI	GCTNAGC	1 cut(s)	1362
Bme1390I	CCNGG	7 cut(s)	650, 671, 999, 1901, 2087, 2706, 2761
Bme18I	GGWCC	3 cut(s)	427, 988, 2009
BmgT120I	GGNCC	4 cut(s)	427, 646, 988, 2009
BmrFI	CCNGG	7 cut(s)	650, 671, 999, 1901, 2087, 2706, 2761
BmrI	ACTGGG	2 cut(s)	621, 2731
BmsI	GCATC	7 cut(s)	325, 558, 778, 1089, 2099, 2288, 2642
BmuI	ACTGGG	2 cut(s)	621, 2731
BoxI	GACNNNNGTC	1 cut(s)	829
BpiI	GAAGAC	2 cut(s)	357, 2439
BplI	GAGNNNNNCTC	2 cut(s)	45, 77
BpmI	CTGGAG	1 cut(s)	2371
Bpu10I	CCTNAGC	1 cut(s)	1950
Bpu1102I	GCTNAGC	1 cut(s)	1362
BpuEI	CTTGAG	2 cut(s)	505, 2386
BpuMI	CCSGG	2 cut(s)	2706, 2761
BsaAI	YACGTR	1 cut(s)	476
BsaBI	GATNNNNATC	2 cut(s)	246, 1284
BsaI	GGTCTC	2 cut(s)	1007, 2702
BsaJI	CCNNGG	6 cut(s)	648, 1212, 1563, 1899, 2220, 2307
BsaWI	WCCGGW	2 cut(s)	83, 1579
BsaXI	ACNNNNNCTCC	2 cut(s)	1831, 1861
Bsc4I	CCNNNNNNNGG	6 cut(s)	151, 1666, 1818, 2367, 2561, 2657
Bse1I	ACTGG	8 cut(s)	602, 616, 715, 1013, 1812, 2107, 2388, 2726
Bse3DI	GCAATG	1 cut(s)	354
Bse8I	GATNNNNATC	2 cut(s)	246, 1284
BseAI	TCCGGA	1 cut(s)	83
BseBI	CCWGG	5 cut(s)	650, 671, 999, 1901, 2087
BseDI	CCNNGG	6 cut(s)	648, 1212, 1563, 1899, 2220, 2307
BseJI	GATNNNNATC	2 cut(s)	246, 1284
BseLI	CCNNNNNNNGG	6 cut(s)	151, 1666, 1818, 2367, 2561, 2657
BseMI	GCAATG	1 cut(s)	354
BseMII	CTCAG	6 cut(s)	377, 1179, 1353, 1749, 1964, 2148
BseNI	ACTGG	8 cut(s)	602, 616, 715, 1013, 1812, 2107, 2388, 2726
BseRI	GAGGAG	4 cut(s)	913, 2058, 2435, 2453
BseYI	CCCAGC	2 cut(s)	149, 402
BsgI	GTGCAG	2 cut(s)	738, 1941
Bsh1236I	CGCG	1 cut(s)	74
Bsh1285I	CGRYCG	1 cut(s)	1580
BshFI	GGCC	4 cut(s)	144, 647, 2531, 2717
BshNI	GGYRCC	2 cut(s)	154, 1903
BsiEI	CGRYCG	1 cut(s)	1580
BsiHKAI	GWGCWC	1 cut(s)	1138
BsiSI	CCGG	4 cut(s)	84, 1580, 2706, 2760
BslFI	GGGAC	3 cut(s)	617, 2738, 2776
BslI	CCNNNNNNNGG	6 cut(s)	151, 1666, 1818, 2367, 2561, 2657
BsmAI	GTCTC	6 cut(s)	466, 1007, 1065, 1754, 2389, 2702
BsmBI	CGTCTC	1 cut(s)	466
BsmFI	GGGAC	3 cut(s)	617, 2738, 2776
BsnI	GGCC	4 cut(s)	144, 647, 2531, 2717
Bso31I	GGTCTC	2 cut(s)	1007, 2702
Bsp1286I	GDGCHC	4 cut(s)	1138, 1731, 2043, 2650
Bsp13I	TCCGGA	1 cut(s)	83
Bsp1720I	GCTNAGC	1 cut(s)	1362
BspACI	CCGC	5 cut(s)	74, 1712, 1836, 2277, 2625
BspANI	GGCC	4 cut(s)	144, 647, 2531, 2717
BspCNI	CTCAG	6 cut(s)	376, 1180, 1354, 1750, 1963, 2149
BspEI	TCCGGA	1 cut(s)	83
BspFNI	CGCG	1 cut(s)	74
BspMAI	CTGCAG	2 cut(s)	106, 268
BspMI	ACCTGC	3 cut(s)	999, 2020, 2242
BspPI	GGATC	7 cut(s)	793, 1019, 1875, 1888, 2100, 2113, 2200
BspT107I	GGYRCC	2 cut(s)	154, 1903
BspTNI	GGTCTC	2 cut(s)	1007, 2702
BsrDI	GCAATG	1 cut(s)	354
BsrI	ACTGG	8 cut(s)	602, 616, 715, 1013, 1812, 2107, 2388, 2726
BssECI	CCNNGG	6 cut(s)	648, 1212, 1563, 1899, 2220, 2307
BssT1I	CCWWGG	2 cut(s)	1563, 2307
Bst2UI	CCWGG	5 cut(s)	650, 671, 999, 1901, 2087
Bst4CI	ACNGT	9 cut(s)	434, 688, 1076, 1176, 1765, 2224, 2242, 2609, 2696
Bst6I	CTCTTC	6 cut(s)	2, 74, 570, 717, 1476, 1509
BstAPI	GCANNNNNTGC	1 cut(s)	398
BstBAI	YACGTR	1 cut(s)	476
BstC8I	GCNNGC	2 cut(s)	2131, 2715
BstDEI	CTNAG	9 cut(s)	33, 363, 733, 1188, 1362, 1758, 1950, 2072, 2157
BstDSI	CCRYGG	1 cut(s)	2220
BstENI	CCTNNNNNAGG	1 cut(s)	2365
BstFNI	CGCG	1 cut(s)	74
BstH2I	RGCGCY	1 cut(s)	2142
BstHHI	GCGC	2 cut(s)	1412, 2141
BstMAI	GTCTC	6 cut(s)	466, 1007, 1065, 1754, 2389, 2702
BstMCI	CGRYCG	1 cut(s)	1580
BstMWI	GCNNNNNNNGC	4 cut(s)	398, 1844, 1955, 2624
BstNI	CCWGG	5 cut(s)	650, 671, 999, 1901, 2087
BstNSI	RCATGY	2 cut(s)	830, 1370
BstPAI	GACNNNNGTC	1 cut(s)	829
BstSCI	CCNGG	7 cut(s)	648, 669, 997, 1899, 2085, 2704, 2759
BstSFI	CTRYAG	3 cut(s)	102, 264, 1172
BstSNI	TACGTA	1 cut(s)	476
BstUI	CGCG	1 cut(s)	74
BstV2I	GAAGAC	2 cut(s)	357, 2439
BstX2I	RGATCY	5 cut(s)	501, 1011, 1880, 2105, 2192
BstXI	CCANNNNNNTGG	2 cut(s)	2299, 2709
BstYI	RGATCY	5 cut(s)	501, 1011, 1880, 2105, 2192
BsuI	GTATCC	1 cut(s)	1630
BsuRI	GGCC	4 cut(s)	144, 647, 2531, 2717
BtgI	CCRYGG	1 cut(s)	2220
BtgZI	GCGATG	2 cut(s)	270, 306
BtsI	GCAGTG	2 cut(s)	197, 971
BtsIMutI	CAGTG	6 cut(s)	197, 439, 971, 1770, 1839, 2304
BveI	ACCTGC	3 cut(s)	999, 2020, 2242
Cac8I	GCNNGC	2 cut(s)	2131, 2715
CaiI	CAGNNNCTG	2 cut(s)	2012, 2557
CfoI	GCGC	2 cut(s)	1412, 2141
Cfr13I	GGNCC	4 cut(s)	427, 646, 988, 2009
CseI	GACGC	2 cut(s)	8, 1365
Csp6I	GTAC	6 cut(s)	155, 477, 527, 1021, 1272, 2503
CviQI	GTAC	6 cut(s)	155, 477, 527, 1021, 1272, 2503
DdeI	CTNAG	9 cut(s)	33, 363, 733, 1188, 1362, 1758, 1950, 2072, 2157
Eam1104I	CTCTTC	6 cut(s)	2, 74, 570, 717, 1476, 1509
EarI	CTCTTC	6 cut(s)	2, 74, 570, 717, 1476, 1509
EciI	GGCGGA	1 cut(s)	1701
Eco105I	TACGTA	1 cut(s)	476
Eco130I	CCWWGG	2 cut(s)	1563, 2307
Eco147I	AGGCCT	1 cut(s)	2717
Eco24I	GRGCYC	3 cut(s)	1731, 2043, 2650
Eco31I	GGTCTC	2 cut(s)	1007, 2702
Eco32I	GATATC	1 cut(s)	457
Eco47I	GGWCC	3 cut(s)	427, 988, 2009
Eco47III	AGCGCT	1 cut(s)	2140
Eco57I	CTGAAG	4 cut(s)	159, 1275, 1863, 1896
EcoNI	CCTNNNNNAGG	1 cut(s)	2365
EcoO109I	RGGNCCY	2 cut(s)	988, 2009
EcoRI	GAATTC	2 cut(s)	857, 1558
EcoRII	CCWGG	5 cut(s)	648, 669, 997, 1899, 2085
EcoRV	GATATC	1 cut(s)	457
EcoT14I	CCWWGG	2 cut(s)	1563, 2307
EcoT22I	ATGCAT	3 cut(s)	573, 1555, 2458
EcoT38I	GRGCYC	3 cut(s)	1731, 2043, 2650
ErhI	CCWWGG	2 cut(s)	1563, 2307
Esp3I	CGTCTC	1 cut(s)	466
FalI	AAGNNNNNCTT	2 cut(s)	1591, 1623
FaqI	GGGAC	3 cut(s)	617, 2738, 2776
FauNDI	CATATG	2 cut(s)	1398, 2458
FbaI	TGATCA	2 cut(s)	1282, 2095
FblI	GTMKAC	2 cut(s)	1451, 2397
FriOI	GRGCYC	3 cut(s)	1731, 2043, 2650
FspBI	CTAG	7 cut(s)	465, 854, 1127, 1392, 1889, 1929, 2520
GlaI	GCGC	2 cut(s)	1411, 2140
GsaI	CCCAGC	2 cut(s)	153, 406
GsuI	CTGGAG	1 cut(s)	2371
HaeII	RGCGCY	1 cut(s)	2142
HaeIII	GGCC	4 cut(s)	144, 647, 2531, 2717
HapII	CCGG	4 cut(s)	84, 1580, 2706, 2760
HgaI	GACGC	2 cut(s)	8, 1365
HhaI	GCGC	2 cut(s)	1412, 2141
Hin6I	GCGC	2 cut(s)	1410, 2139
HinP1I	GCGC	2 cut(s)	1410, 2139
HincII	GTYRAC	4 cut(s)	1452, 1489, 1963, 2113
HindII	GTYRAC	4 cut(s)	1452, 1489, 1963, 2113
HpaI	GTTAAC	1 cut(s)	1963
HpaII	CCGG	4 cut(s)	84, 1580, 2706, 2760
HphI	GGTGA	2 cut(s)	156, 326
Hpy188I	TCNGA	9 cut(s)	183, 366, 742, 1108, 1213, 1633, 2095, 2100, 2770
Hpy99I	CGWCG	1 cut(s)	24
HpyAV	CCTTC	7 cut(s)	361, 776, 979, 1617, 1871, 2217, 2734
HpyCH4III	ACNGT	9 cut(s)	434, 688, 1076, 1176, 1765, 2224, 2242, 2609, 2696
HpyCH4IV	ACGT	4 cut(s)	475, 1151, 1640, 2148
HpyF10VI	GCNNNNNNNGC	4 cut(s)	398, 1844, 1955, 2624
HpyF3I	CTNAG	9 cut(s)	33, 363, 733, 1188, 1362, 1758, 1950, 2072, 2157
HpySE526I	ACGT	4 cut(s)	475, 1151, 1640, 2148
HspAI	GCGC	2 cut(s)	1410, 2139
Kpn2I	TCCGGA	1 cut(s)	83
KpnI	GGTACC	1 cut(s)	158
Ksp22I	TGATCA	2 cut(s)	1282, 2095
KspAI	GTTAAC	1 cut(s)	1963
LmnI	GCTCC	7 cut(s)	869, 1582, 1852, 2023, 2071, 2126, 2653
LweI	GCATC	7 cut(s)	325, 558, 778, 1089, 2099, 2288, 2642
MaeI	CTAG	7 cut(s)	465, 854, 1127, 1392, 1889, 1929, 2520
MaeII	ACGT	4 cut(s)	475, 1151, 1640, 2148
MaeIII	GTNAC	7 cut(s)	204, 665, 772, 831, 969, 1291, 1978
MfeI	CAATTG	2 cut(s)	777, 2346
MflI	RGATCY	5 cut(s)	501, 1011, 1880, 2105, 2192
MhlI	GDGCHC	4 cut(s)	1138, 1731, 2043, 2650
MlyI	GAGTC	6 cut(s)	63, 734, 1457, 1526, 1982, 2069
MmeI	TCCRAC	3 cut(s)	536, 670, 2448
Mph1103I	ATGCAT	3 cut(s)	573, 1555, 2458
MroI	TCCGGA	1 cut(s)	83
MroXI	GAANNNNTTC	2 cut(s)	1674, 1704
MseI	TTAA	7 cut(s)	300, 662, 1056, 1119, 1164, 1341, 1962
MslI	CAYNNNNRTG	7 cut(s)	255, 333, 825, 1496, 1937, 2297, 2707
MspI	CCGG	4 cut(s)	84, 1580, 2706, 2760
MspR9I	CCNGG	7 cut(s)	650, 671, 999, 1901, 2087, 2706, 2761
MunI	CAATTG	2 cut(s)	777, 2346
MvaI	CCWGG	5 cut(s)	650, 671, 999, 1901, 2087
MvnI	CGCG	1 cut(s)	74
MwoI	GCNNNNNNNGC	4 cut(s)	398, 1844, 1955, 2624
NciI	CCSGG	2 cut(s)	2706, 2761
NdeI	CATATG	2 cut(s)	1398, 2458
NmuCI	GTSAC	5 cut(s)	665, 772, 831, 969, 1978
NsiI	ATGCAT	3 cut(s)	573, 1555, 2458
NspI	RCATGY	2 cut(s)	830, 1370
OliI	CACNNNNGTG	1 cut(s)	2297
PaqCI	CACCTGC	1 cut(s)	2242
PceI	AGGCCT	1 cut(s)	2717
PciI	ACATGT	1 cut(s)	826
PdmI	GAANNNNTTC	2 cut(s)	1674, 1704
PfeI	GAWTC	7 cut(s)	242, 317, 815, 850, 905, 1675, 2729
PleI	GAGTC	6 cut(s)	62, 733, 1456, 1525, 1981, 2068
PpsI	GAGTC	6 cut(s)	62, 733, 1456, 1525, 1981, 2068
Ppu21I	YACGTR	1 cut(s)	476
PpuMI	RGGWCCY	2 cut(s)	988, 2009
PscI	ACATGT	1 cut(s)	826
PshAI	GACNNNNGTC	1 cut(s)	829
Psp5II	RGGWCCY	2 cut(s)	988, 2009
Psp6I	CCWGG	5 cut(s)	648, 669, 997, 1899, 2085
PspFI	CCCAGC	2 cut(s)	149, 402
PspGI	CCWGG	5 cut(s)	648, 669, 997, 1899, 2085
PspPI	GGNCC	4 cut(s)	427, 646, 988, 2009
PspPPI	RGGWCCY	2 cut(s)	988, 2009
PstI	CTGCAG	2 cut(s)	106, 268
PstNI	CAGNNNCTG	2 cut(s)	2012, 2557
PsuI	RGATCY	5 cut(s)	501, 1011, 1880, 2105, 2192
RsaI	GTAC	6 cut(s)	156, 478, 528, 1022, 1273, 2504
RsaNI	GTAC	6 cut(s)	155, 477, 527, 1021, 1272, 2503
RseI	CAYNNNNRTG	7 cut(s)	255, 333, 825, 1496, 1937, 2297, 2707
SalI	GTCGAC	1 cut(s)	1450
SaqAI	TTAA	7 cut(s)	300, 662, 1056, 1119, 1164, 1341, 1962
Sau96I	GGNCC	4 cut(s)	427, 646, 988, 2009
SchI	GAGTC	6 cut(s)	63, 734, 1457, 1526, 1982, 2069
ScrFI	CCNGG	7 cut(s)	650, 671, 999, 1901, 2087, 2706, 2761
SduI	GDGCHC	4 cut(s)	1138, 1731, 2043, 2650
SfaNI	GCATC	7 cut(s)	325, 558, 778, 1089, 2099, 2288, 2642
SfcI	CTRYAG	3 cut(s)	102, 264, 1172
SinI	GGWCC	3 cut(s)	427, 988, 2009
SmiMI	CAYNNNNRTG	7 cut(s)	255, 333, 825, 1496, 1937, 2297, 2707
SmlI	CTYRAG	2 cut(s)	520, 2365
SmoI	CTYRAG	2 cut(s)	520, 2365
SnaBI	TACGTA	1 cut(s)	476
SpeI	ACTAGT	2 cut(s)	1888, 2519
SseBI	AGGCCT	1 cut(s)	2717
SsiI	CCGC	5 cut(s)	74, 1712, 1836, 2277, 2625
SspMI	CTAG	7 cut(s)	465, 854, 1127, 1392, 1889, 1929, 2520
StuI	AGGCCT	1 cut(s)	2717
StyD4I	CCNGG	7 cut(s)	648, 669, 997, 1899, 2085, 2704, 2759
StyI	CCWWGG	2 cut(s)	1563, 2307
TaaI	ACNGT	9 cut(s)	434, 688, 1076, 1176, 1765, 2224, 2242, 2609, 2696
TaiI	ACGT	4 cut(s)	478, 1154, 1643, 2151
TaqI	TCGA	7 cut(s)	63, 983, 1178, 1451, 1576, 1971, 2199
TaqII	GACCGA	1 cut(s)	2696
TatI	WGTACW	1 cut(s)	1020
TauI	GCSGC	1 cut(s)	2279
TfiI	GAWTC	7 cut(s)	242, 317, 815, 850, 905, 1675, 2729
Tru1I	TTAA	7 cut(s)	300, 662, 1056, 1119, 1164, 1341, 1962
Tru9I	TTAA	7 cut(s)	300, 662, 1056, 1119, 1164, 1341, 1962
TscAI	CASTG	6 cut(s)	204, 439, 978, 1770, 1846, 2304
TseFI	GTSAC	5 cut(s)	665, 772, 831, 969, 1978
Tsp45I	GTSAC	5 cut(s)	665, 772, 831, 969, 1978
TspGWI	ACGGA	3 cut(s)	837, 1842, 2098
TspRI	CASTG	6 cut(s)	204, 439, 978, 1770, 1846, 2304
VpaK11BI	GGWCC	3 cut(s)	427, 988, 2009
XagI	CCTNNNNNAGG	1 cut(s)	2365
XapI	RAATTY	7 cut(s)	184, 271, 394, 857, 1345, 1558, 1704
XbaI	TCTAGA	1 cut(s)	853
XceI	RCATGY	2 cut(s)	830, 1370
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1005, 1668
XmiI	GTMKAC	2 cut(s)	1451, 2397
XmnI	GAANNNNTTC	2 cut(s)	1674, 1704
XspI	CTAG	7 cut(s)	465, 854, 1127, 1392, 1889, 1929, 2520
Zsp2I	ATGCAT	3 cut(s)	573, 1555, 2458

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.