Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0006119

Physical Location & Seq

Genomic Coordinates Reverse (-)

2838092 .. 2842098

Gene Structure 4007 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1035400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2634 bp

ATGTTCAATTTACAAAATCCACTGCTGTTACTTGGGCAATATAGTGATGACGATTTGGATGATGATTCAAATCATAGCGATGTTTCTGCAGAAAATTCCTCGCCTGACAAAAGCGATGAGGTTAAGAGTTTGCTTGGTGAATCTTGTCAGCATTTGGATGCCAAAGCTAGTGAAGACATTGCTTCTCAGAAGGTTGAGAAACAGGGAGGTAATGCAGATTCTGCCCAGCAAGATTGTGAGCAGAACATGGACCACAGTGATAAAAGAGAGAATGATAATATCGTCTCTAGTGATTTACGTACAGAATCGGATTTGAAGCAACAGATCTCTGTTCCTGAAACCTCAAGCGTACAAGTCATTGGAGATGTTAGTTCAGGTTGGAAGATTGTGATGCATGAAGAGAGTAATAGCTATTATTACTGGAATACTGAAACTGGGGAAACTTCATGGGACGTCCCTGATGTTTTGGCCCAGGAAACGAAGTTAAGTGACCAGGAAATGCCTACTACTGTTGGAACAACAGATAATGCTACTGGTGGTGCAGAAGAGTCTAACTTAGCTTCTGATGTGAAGTTAAATGGTTTCTCTAATTCTGTCACAATTGAAGGGGATGCCAATATGGTCCCTCATGGAATAGAATCGCACGGGCATGGGTCACAAATTGACAAGTGGAAATTAGAATTCAATAAAGGAGCCACTCACGATACAATAGCTAATGAAGATTGTGAATCAGCGATTGCTCTCTCCTCTGGTCTTATCAAACATTGTGAGGCATTATTAGGAAGATTGAAGTCACTGCAAGGGTCGAAGGACCCGCTGCCAGGTCTCAACTGGATCACAAAGTACACTATGGAAGTTGAGATAAGGCTATTTGATATTAAGTCTCTTTTATCTCATGGTTCATCTCTGCTTCCATTTTGGATGCACTCTGAAAGACAGCTTAAACAACTAGAGAGTGCTCTTAACGATGAAACGTCCAAGATTGTTAAATCTCTACAGTTGAATGATACTGAGGCAACCCATCCATCTTTCTCCCAGGCTAAAAACAATTTTCAGGAAAAAGAGGGGTATAAAACTGAAGTAGATCAAGTTGGTAATCTGGATGATCGTCATGTTACTCCTATTATTGATACATCAGCGATAGTTTCTAAAGTTCAAGATGTTAAAAATTCTGGTGCAAATGCTGAGCATGTGTCTCCGTCTGGCTCTCCTACTAGACATATGGATAGTGGCGCAAGTGAACAAGTCAATGAGGTGGTAGTTCCCTATGAGTCGACTACCAAAAATGAGTTTTGTGGTGGGGAAGAGGTTGACATGGATGTGGACATGGAAGTTGAAGAGTCAAACTATGCAGGAGATACAACTATTGAATATGCATTGAATTCCAAGGAGTTTGCTCTACCGGAGCAGCCAATTCATCCAAGTCCACCTTCAATATACACATCTTTAGTGTCAGAGGATACGTTCACCATTCCACCTCCCCCAGATGAGGAATGGATTCCCCCACCACCACCTGATAATGAAGAAATTCCTCCGCCCCCACCTGATGAGCCCCCACCTGAGCCCCCATATTCTTCTCATCCATCTTACCCTGAGACAACGCAACCTCCTTATGCAGAGCAATACAATTATTCATATCCAGCTTCCAGTTTTGGGTATTACGGGCATACCGCCACTGAAGCTCCTAACACTAATTTTTATGGACATCCTGAAGGATCCCAAGTAGTTATACCCCAGGCACCACTTTACTATGGTGCAGTTCCTATCACCTACATGGAAACTGCTCAGGTTGCAGTTAACCCTGTCGAGTCTGTCACATATTATGGGCTTCAGGATGGCACAGGACCTGCTGCTCCTGTAGTCAGTAGTGTAGAGCCCTTGCAATTTCACAGCGAATCTGCTCCTCTAAGCTATGAAAACCCGGCATCTGATCAGACTGGATCCGTCAACTCCTATTCAGGAGCAGGCAGCAGCGCTTCAAATGTGAATACTGAGCGTTTTTCTGTTGATAGTGGGAATGATGGGGGATCTATCGAGGTTCCTTCTACCACAGCCACAGTTCAAGCACCTGCAACTGTTTCCTTGCCATCAACTAATTCTGTTCCTATTGCCGCATCTATTTCTGCCACATCAGTGGCTACCAAGGTTCAATCTAAAGTTCCACGAACGAAAAAGCGAACAAGTGCAGTTGCTTCCTCTTTGAGGTCTAATAAGAAAGTCTCCAGTTTAGTAGACAAGTGGAAAGCAGCAAAAGAGGAGTTGCTTGAAGACGAGGAGGAACCTGAAAATGCATACGAGTCGTTAGAGAGGAAGCGACAAAGGGGAATAGAGGAATGGTACGCACAACAAATTACTAGTGGAGAGGCCAAAGATAATGCCAATTTTCAGCCTCTGGGTGGCGATTGGCGTGAGAAAGTGAAGCGAAGAAAAGCTCAATTAGACCGTGAAGCTGCAAAAACCGCAGCAGCATCTACATCTGCGGCTCCTACTGATGGGAACCAGCAGCCTGATATGACCGAACAATCAAACGGTCTCCCACCCGGATGGCACGCCTACTGGGACGAATCCTCAAAGAAGGTTTACTATGGAAATACCGTGACATCGGAAACTACATGGACGAAACCAACAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0016604 GO:0016607 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0070013

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

878

Amino Acids

95.55

Weight (kDa)

4.5

Isoelectric Point (pI)

49.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WW	PF00397	125 - 153	7.8e-08	WW domain
WW	PF00397	845 - 875	5.5e-10	WW domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006119)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G13225 AT3G13225 AT3G13225
fragaria_vesca	FvH4_3g42241 FvH4_3g42241 FvH4_3g42241 FvH4_3g42241 FvH4_3g42241 FvH4_3g42241 FvH4_3g42241
malus_domestica	MD03G1035400.v1.1 MD11G1037100.v1.1
prunus_persica	Prupe.6G028400_v2.0.a1 Prupe.6G028400_v2.0.a1
pyrus_communis	pycom03g02760 pycom11g03080
rosa_chinensis	RchiOBHm_Chr5g0075571
rosa_laevigata	RLG00000036576
rosa_multiflora	Rmu_sc0003437.1_g000006
rosa_roxburghii	Rroxscaffold_1G00006000
rosa_rugosa	Rorug05G0440600 Rorug05G0440700
rosa_samantha	Rh5AG497800 Rh5BG518600 Rh5CG542300 Rh5DG530500
rosa_wichuraiana	Rw5G046140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2077
AatII	GACGTC	1 cut(s)	456
Acc36I	ACCTGC	2 cut(s)	1855, 2077
AccB1I	GGYRCC	1 cut(s)	1738
AccI	GTMKAC	2 cut(s)	1274, 2232
AciI	CCGC	6 cut(s)	815, 1535, 1671, 2112, 2460, 2480
AclWI	GGATC	6 cut(s)	842, 1710, 1723, 1935, 1948, 2035
AcsI	RAATTY	5 cut(s)	94, 680, 1168, 1381, 1527
AcuI	CTGAAG	4 cut(s)	1098, 1698, 1731, 1814
AcyI	GRCGYC	1 cut(s)	453
AfaI	GTAC	4 cut(s)	301, 351, 845, 2339
AfeI	AGCGCT	1 cut(s)	1975
AfiI	CCNNNNNNNGG	6 cut(s)	821, 1489, 1653, 2202, 2396, 2492
AhlI	ACTAGT	1 cut(s)	2354
AjnI	CCWGG	5 cut(s)	471, 492, 820, 1035, 1734
AjuI	GAANNNNNNNTTGG	2 cut(s)	1414, 1446
AleI	CACNNNNGTG	1 cut(s)	2132
Alw21I	GWGCWC	1 cut(s)	961
Alw26I	GTCTC	7 cut(s)	289, 830, 888, 1200, 1589, 2224, 2537
AlwI	GGATC	6 cut(s)	842, 1710, 1723, 1935, 1948, 2035
AlwNI	CAGNNNCTG	3 cut(s)	221, 1847, 2392
Aor51HI	AGCGCT	1 cut(s)	1975
AoxI	GGCC	2 cut(s)	468, 2364
ApoI	RAATTY	5 cut(s)	94, 680, 1168, 1381, 1527
Asp700I	GAANNNNTTC	2 cut(s)	1497, 1527
AspLEI	GCGC	2 cut(s)	1235, 1976
AspS9I	GGNCC	5 cut(s)	250, 469, 622, 811, 1844
AsuC2I	CCSGG	2 cut(s)	1922, 2541
AsuHPI	GGTGA	3 cut(s)	149, 1459, 1759
AvaII	GGWCC	4 cut(s)	250, 622, 811, 1844
BamHI	GGATCC	2 cut(s)	1715, 1940
BanI	GGYRCC	1 cut(s)	1738
BanII	GRGCYC	3 cut(s)	1554, 1566, 1878
BbsI	GAAGAC	2 cut(s)	180, 2274
Bbv12I	GWGCWC	1 cut(s)	961
BccI	CCATC	8 cut(s)	1029, 1033, 1591, 1829, 2015, 2095, 2486, 2538
BcgI	CGANNNNNNTGC	4 cut(s)	68, 102, 2280, 2314
BciT130I	CCWGG	5 cut(s)	473, 494, 822, 1037, 1736
BciVI	GTATCC	1 cut(s)	1453
BclI	TGATCA	1 cut(s)	1930
BcnI	CCSGG	2 cut(s)	1922, 2541
BcoDI	GTCTC	7 cut(s)	289, 830, 888, 1200, 1589, 2224, 2537
BcuI	ACTAGT	1 cut(s)	2354
BfaI	CTAG	5 cut(s)	168, 288, 950, 1215, 2355
BfmI	CTRYAG	3 cut(s)	87, 995, 1857
BfoI	RGCGCY	1 cut(s)	1977
BfuAI	ACCTGC	2 cut(s)	1855, 2077
BfuI	GTATCC	1 cut(s)	1453
BglII	AGATCT	1 cut(s)	324
BlpI	GCTNAGC	1 cut(s)	1185
Bme1390I	CCNGG	7 cut(s)	473, 494, 822, 1037, 1736, 1922, 2541
Bme18I	GGWCC	4 cut(s)	250, 622, 811, 1844
BmgT120I	GGNCC	5 cut(s)	250, 469, 622, 811, 1844
BmrFI	CCNGG	7 cut(s)	473, 494, 822, 1037, 1736, 1922, 2541
BmrI	ACTGGG	2 cut(s)	444, 2566
BmsI	GCATC	7 cut(s)	148, 381, 601, 912, 1934, 2123, 2477
BmuI	ACTGGG	2 cut(s)	444, 2566
BpiI	GAAGAC	2 cut(s)	180, 2274
BpmI	CTGGAG	1 cut(s)	2206
Bpu10I	CCTNAGC	2 cut(s)	1560, 1785
Bpu1102I	GCTNAGC	1 cut(s)	1185
BpuEI	CTTGAG	1 cut(s)	328
BpuMI	CCSGG	2 cut(s)	1922, 2541
BsaAI	YACGTR	1 cut(s)	299
BsaBI	GATNNNNATC	1 cut(s)	69
BsaHI	GRCGYC	1 cut(s)	453
BsaI	GGTCTC	2 cut(s)	830, 2537
BsaJI	CCNNGG	5 cut(s)	471, 1035, 1386, 1734, 2142
BsaWI	WCCGGW	1 cut(s)	1402
BsaXI	ACNNNNNCTCC	4 cut(s)	1591, 1621, 1666, 1696
Bsc4I	CCNNNNNNNGG	6 cut(s)	821, 1489, 1653, 2202, 2396, 2492
Bse1I	ACTGG	8 cut(s)	425, 439, 538, 836, 1647, 1942, 2223, 2561
Bse3DI	GCAATG	1 cut(s)	177
Bse8I	GATNNNNATC	1 cut(s)	69
BseBI	CCWGG	5 cut(s)	473, 494, 822, 1037, 1736
BseDI	CCNNGG	5 cut(s)	471, 1035, 1386, 1734, 2142
BseJI	GATNNNNATC	1 cut(s)	69
BseLI	CCNNNNNNNGG	6 cut(s)	821, 1489, 1653, 2202, 2396, 2492
BseMI	GCAATG	1 cut(s)	177
BseMII	CTCAG	7 cut(s)	200, 1002, 1176, 1551, 1584, 1799, 1983
BseNI	ACTGG	8 cut(s)	425, 439, 538, 836, 1647, 1942, 2223, 2561
BseRI	GAGGAG	4 cut(s)	736, 1893, 2270, 2288
BseYI	CCCAGC	1 cut(s)	225
BsgI	GTGCAG	3 cut(s)	561, 1776, 2205
BshFI	GGCC	2 cut(s)	470, 2366
BshNI	GGYRCC	1 cut(s)	1738
BsiHKAI	GWGCWC	1 cut(s)	961
BsiSI	CCGG	3 cut(s)	1403, 1922, 2541
BslFI	GGGAC	4 cut(s)	440, 464, 608, 2573
BslI	CCNNNNNNNGG	6 cut(s)	821, 1489, 1653, 2202, 2396, 2492
BsmAI	GTCTC	7 cut(s)	289, 830, 888, 1200, 1589, 2224, 2537
BsmBI	CGTCTC	1 cut(s)	289
BsmFI	GGGAC	4 cut(s)	440, 464, 608, 2573
BsnI	GGCC	2 cut(s)	470, 2366
Bso31I	GGTCTC	2 cut(s)	830, 2537
Bsp1286I	GDGCHC	4 cut(s)	961, 1554, 1566, 1878
Bsp143I	GATC	8 cut(s)	324, 834, 1084, 1105, 1715, 1930, 1940, 2027
Bsp1720I	GCTNAGC	1 cut(s)	1185
BspACI	CCGC	6 cut(s)	815, 1535, 1671, 2112, 2460, 2480
BspANI	GGCC	2 cut(s)	470, 2366
BspCNI	CTCAG	7 cut(s)	199, 1003, 1177, 1552, 1585, 1798, 1984
BspMAI	CTGCAG	1 cut(s)	91
BspMI	ACCTGC	2 cut(s)	1855, 2077
BspPI	GGATC	6 cut(s)	842, 1710, 1723, 1935, 1948, 2035
BspT107I	GGYRCC	1 cut(s)	1738
BspTNI	GGTCTC	2 cut(s)	830, 2537
BsrDI	GCAATG	1 cut(s)	177
BsrI	ACTGG	8 cut(s)	425, 439, 538, 836, 1647, 1942, 2223, 2561
BssECI	CCNNGG	5 cut(s)	471, 1035, 1386, 1734, 2142
BssMI	GATC	8 cut(s)	324, 834, 1084, 1105, 1715, 1930, 1940, 2027
BssNI	GRCGYC	1 cut(s)	453
BssT1I	CCWWGG	2 cut(s)	1386, 2142
Bst2UI	CCWGG	5 cut(s)	473, 494, 822, 1037, 1736
Bst4CI	ACNGT	8 cut(s)	257, 511, 999, 2059, 2077, 2444, 2531, 2596
Bst6I	CTCTTC	4 cut(s)	393, 540, 1299, 1332
BstACI	GRCGYC	1 cut(s)	453
BstAPI	GCANNNNNTGC	1 cut(s)	221
BstBAI	YACGTR	1 cut(s)	299
BstC8I	GCNNGC	2 cut(s)	1966, 2550
BstDEI	CTNAG	9 cut(s)	186, 556, 1011, 1185, 1560, 1593, 1785, 1907, 1992
BstENI	CCTNNNNNAGG	1 cut(s)	2200
BstH2I	RGCGCY	1 cut(s)	1977
BstHHI	GCGC	2 cut(s)	1235, 1976
BstKTI	GATC	8 cut(s)	327, 837, 1087, 1108, 1718, 1933, 1943, 2030
BstMAI	GTCTC	7 cut(s)	289, 830, 888, 1200, 1589, 2224, 2537
BstMBI	GATC	8 cut(s)	324, 834, 1084, 1105, 1715, 1930, 1940, 2027
BstMWI	GCNNNNNNNGC	4 cut(s)	221, 1679, 1790, 2459
BstNI	CCWGG	5 cut(s)	473, 494, 822, 1037, 1736
BstNSI	RCATGY	1 cut(s)	1193
BstSCI	CCNGG	7 cut(s)	471, 492, 820, 1035, 1734, 1920, 2539
BstSFI	CTRYAG	3 cut(s)	87, 995, 1857
BstSNI	TACGTA	1 cut(s)	299
BstV2I	GAAGAC	2 cut(s)	180, 2274
BstX2I	RGATCY	4 cut(s)	324, 1715, 1940, 2027
BstXI	CCANNNNNNTGG	2 cut(s)	2134, 2544
BstYI	RGATCY	4 cut(s)	324, 1715, 1940, 2027
BsuI	GTATCC	1 cut(s)	1453
BsuRI	GGCC	2 cut(s)	470, 2366
BtgZI	GCGATG	2 cut(s)	93, 129
BtsI	GCAGTG	2 cut(s)	20, 794
BtsIMutI	CAGTG	5 cut(s)	20, 262, 794, 1674, 2139
BveI	ACCTGC	2 cut(s)	1855, 2077
Cac8I	GCNNGC	2 cut(s)	1966, 2550
CaiI	CAGNNNCTG	3 cut(s)	221, 1847, 2392
CfoI	GCGC	2 cut(s)	1235, 1976
Cfr13I	GGNCC	5 cut(s)	250, 469, 622, 811, 1844
Csp6I	GTAC	4 cut(s)	300, 350, 844, 2338
CviQI	GTAC	4 cut(s)	300, 350, 844, 2338
DdeI	CTNAG	9 cut(s)	186, 556, 1011, 1185, 1560, 1593, 1785, 1907, 1992
DpnI	GATC	8 cut(s)	326, 836, 1086, 1107, 1717, 1932, 1942, 2029
DpnII	GATC	8 cut(s)	324, 834, 1084, 1105, 1715, 1930, 1940, 2027
Eam1104I	CTCTTC	4 cut(s)	393, 540, 1299, 1332
EarI	CTCTTC	4 cut(s)	393, 540, 1299, 1332
EciI	GGCGGA	1 cut(s)	1524
Eco105I	TACGTA	1 cut(s)	299
Eco130I	CCWWGG	2 cut(s)	1386, 2142
Eco24I	GRGCYC	3 cut(s)	1554, 1566, 1878
Eco31I	GGTCTC	2 cut(s)	830, 2537
Eco47I	GGWCC	4 cut(s)	250, 622, 811, 1844
Eco47III	AGCGCT	1 cut(s)	1975
Eco57I	CTGAAG	4 cut(s)	1098, 1698, 1731, 1814
EcoNI	CCTNNNNNAGG	1 cut(s)	2200
EcoO109I	RGGNCCY	2 cut(s)	811, 1844
EcoRI	GAATTC	2 cut(s)	680, 1381
EcoRII	CCWGG	5 cut(s)	471, 492, 820, 1035, 1734
EcoT14I	CCWWGG	2 cut(s)	1386, 2142
EcoT22I	ATGCAT	3 cut(s)	396, 1378, 2293
EcoT38I	GRGCYC	3 cut(s)	1554, 1566, 1878
ErhI	CCWWGG	2 cut(s)	1386, 2142
Esp3I	CGTCTC	1 cut(s)	289
FalI	AAGNNNNNCTT	2 cut(s)	1414, 1446
FaqI	GGGAC	4 cut(s)	440, 464, 608, 2573
FauI	CCCGC	1 cut(s)	822
FauNDI	CATATG	1 cut(s)	1221
FbaI	TGATCA	1 cut(s)	1930
FblI	GTMKAC	2 cut(s)	1274, 2232
FriOI	GRGCYC	3 cut(s)	1554, 1566, 1878
FspBI	CTAG	5 cut(s)	168, 288, 950, 1215, 2355
GlaI	GCGC	2 cut(s)	1234, 1975
GsaI	CCCAGC	1 cut(s)	229
GsuI	CTGGAG	1 cut(s)	2206
HaeII	RGCGCY	1 cut(s)	1977
HaeIII	GGCC	2 cut(s)	470, 2366
HapII	CCGG	3 cut(s)	1403, 1922, 2541
HhaI	GCGC	2 cut(s)	1235, 1976
Hin1I	GRCGYC	1 cut(s)	453
Hin6I	GCGC	2 cut(s)	1233, 1974
HinP1I	GCGC	2 cut(s)	1233, 1974
HincII	GTYRAC	4 cut(s)	1275, 1312, 1798, 1948
HindII	GTYRAC	4 cut(s)	1275, 1312, 1798, 1948
HpaI	GTTAAC	1 cut(s)	1798
HpaII	CCGG	3 cut(s)	1403, 1922, 2541
HphI	GGTGA	3 cut(s)	149, 1459, 1759
Hpy188I	TCNGA	8 cut(s)	189, 310, 565, 931, 1456, 1930, 1935, 2605
Hpy188III	TCNNGA	8 cut(s)	335, 701, 1055, 1100, 1157, 1709, 1832, 1959
HpyAV	CCTTC	7 cut(s)	184, 599, 802, 1440, 1706, 2052, 2569
HpyCH4III	ACNGT	8 cut(s)	257, 511, 999, 2059, 2077, 2444, 2531, 2596
HpyCH4IV	ACGT	4 cut(s)	298, 453, 974, 1463
HpyF10VI	GCNNNNNNNGC	4 cut(s)	221, 1679, 1790, 2459
HpyF3I	CTNAG	9 cut(s)	186, 556, 1011, 1185, 1560, 1593, 1785, 1907, 1992
HpySE526I	ACGT	4 cut(s)	298, 453, 974, 1463
Hsp92I	GRCGYC	1 cut(s)	453
HspAI	GCGC	2 cut(s)	1233, 1974
Ksp22I	TGATCA	1 cut(s)	1930
KspAI	GTTAAC	1 cut(s)	1798
Kzo9I	GATC	8 cut(s)	324, 834, 1084, 1105, 1715, 1930, 1940, 2027
LmnI	GCTCC	7 cut(s)	692, 1405, 1687, 1858, 1906, 1961, 2488
LweI	GCATC	7 cut(s)	148, 381, 601, 912, 1934, 2123, 2477
MaeI	CTAG	5 cut(s)	168, 288, 950, 1215, 2355
MaeII	ACGT	4 cut(s)	298, 453, 974, 1463
MaeIII	GTNAC	8 cut(s)	27, 488, 595, 654, 792, 1114, 1813, 2596
MalI	GATC	8 cut(s)	326, 836, 1086, 1107, 1717, 1932, 1942, 2029
MboI	GATC	8 cut(s)	324, 834, 1084, 1105, 1715, 1930, 1940, 2027
MfeI	CAATTG	1 cut(s)	600
MflI	RGATCY	4 cut(s)	324, 1715, 1940, 2027
MhlI	GDGCHC	4 cut(s)	961, 1554, 1566, 1878
MlyI	GAGTC	5 cut(s)	557, 1280, 1349, 1817, 2306
MmeI	TCCRAC	2 cut(s)	359, 493
Mph1103I	ATGCAT	3 cut(s)	396, 1378, 2293
MroXI	GAANNNNTTC	2 cut(s)	1497, 1527
MseI	TTAA	9 cut(s)	123, 485, 575, 879, 942, 963, 987, 1164, 1797
MslI	CAYNNNNRTG	7 cut(s)	78, 156, 648, 1319, 1772, 2132, 2542
MspA1I	CMGCKG	1 cut(s)	817
MspI	CCGG	3 cut(s)	1403, 1922, 2541
MspR9I	CCNGG	7 cut(s)	473, 494, 822, 1037, 1736, 1922, 2541
MunI	CAATTG	1 cut(s)	600
MvaI	CCWGG	5 cut(s)	473, 494, 822, 1037, 1736
MwoI	GCNNNNNNNGC	4 cut(s)	221, 1679, 1790, 2459
NciI	CCSGG	2 cut(s)	1922, 2541
NdeI	CATATG	1 cut(s)	1221
NdeII	GATC	8 cut(s)	324, 834, 1084, 1105, 1715, 1930, 1940, 2027
NmuCI	GTSAC	6 cut(s)	488, 595, 654, 792, 1813, 2596
NsiI	ATGCAT	3 cut(s)	396, 1378, 2293
NspI	RCATGY	1 cut(s)	1193
OliI	CACNNNNGTG	1 cut(s)	2132
PaqCI	CACCTGC	1 cut(s)	2077
PdmI	GAANNNNTTC	2 cut(s)	1497, 1527
PfeI	GAWTC	9 cut(s)	65, 140, 218, 305, 638, 728, 1498, 1895, 2564
PleI	GAGTC	5 cut(s)	556, 1279, 1348, 1816, 2305
PpsI	GAGTC	5 cut(s)	556, 1279, 1348, 1816, 2305
Ppu21I	YACGTR	1 cut(s)	299
PpuMI	RGGWCCY	2 cut(s)	811, 1844
Psp5II	RGGWCCY	2 cut(s)	811, 1844
Psp6I	CCWGG	5 cut(s)	471, 492, 820, 1035, 1734
PspFI	CCCAGC	1 cut(s)	225
PspGI	CCWGG	5 cut(s)	471, 492, 820, 1035, 1734
PspPI	GGNCC	5 cut(s)	250, 469, 622, 811, 1844
PspPPI	RGGWCCY	2 cut(s)	811, 1844
PstI	CTGCAG	1 cut(s)	91
PstNI	CAGNNNCTG	3 cut(s)	221, 1847, 2392
PsuI	RGATCY	4 cut(s)	324, 1715, 1940, 2027
RsaI	GTAC	4 cut(s)	301, 351, 845, 2339
RsaNI	GTAC	4 cut(s)	300, 350, 844, 2338
RseI	CAYNNNNRTG	7 cut(s)	78, 156, 648, 1319, 1772, 2132, 2542
SalI	GTCGAC	1 cut(s)	1273
SaqAI	TTAA	9 cut(s)	123, 485, 575, 879, 942, 963, 987, 1164, 1797
Sau3AI	GATC	8 cut(s)	324, 834, 1084, 1105, 1715, 1930, 1940, 2027
Sau96I	GGNCC	5 cut(s)	250, 469, 622, 811, 1844
SchI	GAGTC	5 cut(s)	557, 1280, 1349, 1817, 2306
ScrFI	CCNGG	7 cut(s)	473, 494, 822, 1037, 1736, 1922, 2541
SduI	GDGCHC	4 cut(s)	961, 1554, 1566, 1878
SfaNI	GCATC	7 cut(s)	148, 381, 601, 912, 1934, 2123, 2477
SfcI	CTRYAG	3 cut(s)	87, 995, 1857
SinI	GGWCC	4 cut(s)	250, 622, 811, 1844
SmiMI	CAYNNNNRTG	7 cut(s)	78, 156, 648, 1319, 1772, 2132, 2542
SmlI	CTYRAG	1 cut(s)	343
SmoI	CTYRAG	1 cut(s)	343
SnaBI	TACGTA	1 cut(s)	299
SpeI	ACTAGT	1 cut(s)	2354
SsiI	CCGC	6 cut(s)	815, 1535, 1671, 2112, 2460, 2480
SspMI	CTAG	5 cut(s)	168, 288, 950, 1215, 2355
StyD4I	CCNGG	7 cut(s)	471, 492, 820, 1035, 1734, 1920, 2539
StyI	CCWWGG	2 cut(s)	1386, 2142
TaaI	ACNGT	8 cut(s)	257, 511, 999, 2059, 2077, 2444, 2531, 2596
TaiI	ACGT	4 cut(s)	301, 456, 977, 1466
TaqI	TCGA	4 cut(s)	806, 1274, 1806, 2034
TaqII	GACCGA	1 cut(s)	2531
TatI	WGTACW	1 cut(s)	843
TauI	GCSGC	2 cut(s)	2114, 2483
TfiI	GAWTC	9 cut(s)	65, 140, 218, 305, 638, 728, 1498, 1895, 2564
Tru1I	TTAA	9 cut(s)	123, 485, 575, 879, 942, 963, 987, 1164, 1797
Tru9I	TTAA	9 cut(s)	123, 485, 575, 879, 942, 963, 987, 1164, 1797
TscAI	CASTG	5 cut(s)	27, 262, 801, 1681, 2139
TseFI	GTSAC	6 cut(s)	488, 595, 654, 792, 1813, 2596
Tsp45I	GTSAC	6 cut(s)	488, 595, 654, 792, 1813, 2596
TspDTI	ATGAA	9 cut(s)	411, 435, 732, 891, 984, 1406, 1536, 1623, 1929
TspGWI	ACGGA	2 cut(s)	1188, 1933
TspRI	CASTG	5 cut(s)	27, 262, 801, 1681, 2139
VpaK11BI	GGWCC	4 cut(s)	250, 622, 811, 1844
XagI	CCTNNNNNAGG	1 cut(s)	2200
XapI	RAATTY	5 cut(s)	94, 680, 1168, 1381, 1527
XceI	RCATGY	1 cut(s)	1193
XcmI	CCANNNNNNNNNTGG	2 cut(s)	828, 1491
XmiI	GTMKAC	2 cut(s)	1274, 2232
XmnI	GAANNNNTTC	2 cut(s)	1497, 1527
XspI	CTAG	5 cut(s)	168, 288, 950, 1215, 2355
ZraI	GACGTC	1 cut(s)	454
Zsp2I	ATGCAT	3 cut(s)	396, 1378, 2293

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.