Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0006119

Physical Location & Seq

Genomic Coordinates Forward (+)

81340738 .. 81345435

Gene Structure 4698 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ35028

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2532 bp

ATGTCTGCAGGTCAGCAACCAGAAAATCCGCTGCTTTTACTTGGCCAGTATAGTGATGAGGAGTTGGATGATGGCTCAAATAAAACTCTTAGTGATGCTGCTGTAGAGAATTCCTCGCCTCAGAATAATGATGAGGTTAAGAGTGCGCTTAATGAATTGGGCCAGAATTTGGACATCAAAGGCGGCGATGAGCCTGCTTCTCAGAAATTCAATCAAAAGGAAGTGGATACGAACTCTGATTCACTGGATCGTGATCAGAGCATGGAAGACAGTGATAAAAGAGAAAATGGTGATCTGGCCCCCAGGGATTTCCGTACAGAAGTGGATTTGACAGAGAAAGTTTCTTTGCCTGAAAGTTCTAATGTACAAGTCATTGGTGATGTCAGTTCAGGTTGGAAGATTGTGATGCATGAAGAAAGTAAAAGCTATTATTACTGGAATACTGAAACTGGGGAAACTTCATGGGAAGTGCCTGATGTTTTGGCTCAAGCAACCAAGTTAACCTGTGACCAGCCTTCTGTTGATGAAAAGCCAGAGAATCTACCTGTAGGTACACAAGAGCATTCTAATTCTGACGTGATTGAAGGGTCTTCCAATATGGTTCCTCAGGGCATATATGGGGATGGGTCCCAGATGAATGACTGGAATCTAGGATGCCATAATGGATCAGAGATTGATCCCTCTTCTCATCTTGTAAAATATACGGAGGCTTTGTTAGAGAGATTGAAGTTGCTACAACGGTCCAAGGATCAAGTGCAAGGCGTTGACTGGATCACAAAGTACATTTTGGAAGTTGAAATTAGACTGTTTGATTTGAAGTCACTTTTTTCCTATGGGTCATCTCTGCTTCCATTCTGGATGCATTCTGAAATACAGCTTAAGCGGCTTGAGAGTGGTATTAATGATGAAATGTCCAACATTGTTAAGTCTGGAGAATCAAATGAAGTTGAGGCATCTCATACATCATTCTCCCAGGGAGAAATAAATGTCCCGGAAAGCATGGGGTCTAAAACTGAAGTAGATCGAGCAGAAAATAAGCAACTTATGTCCTCTCTAAATGATTATCAGGGTTCTCTTAGTGCGGATACAGTCAATGAAGATCAAGAAGTTAAAGACTCCATTGTAAAAGATGAGCATGTTTCTGCAATTGGCTCCCCAAGTAGACATGTGGAGGTTGGTGCAAGTGAACAAGTCCATGGGATAGTAGTTCCTGATGAGTCAACTATTAAGAATGAGGTTTGTGCTGTGGAAGATGTTGACATGGATGTGGACATGGAAGTTGAAGATTCAAATCCAGCAGGAAATACAGCTATTTCTTATGCATTGCATGCCCGGGAGTTCACTGCAACAGAACAGCCAAATCAGTCTAGTCCACCTTCCCTATATACATCGCTAGTTTCAGAGGATACTTTCGCGGTTCGACCTCCTCCAGATGAGGAATGGATTCCTCCACCCCCACCTGATAATGAACAGGTTCCTCCGCCTCCACCTGATGAGCCACCACCTGAACCTCCATATCCTCCACTTCCGTCTTACTCTGAGACAGGACAACCTCCCTATGCAGAACAGTATAGTTACTCCTATACGGTTCCCAGTTTTGAATATTATGGACATGCAGTTGCTGAAGCACCTGGTGCTAATTATTATGGACACACTGAAGGATGTCAAGTTGCTATACCCCACGTACCAGTTTACTATGGTGCAGTTCCTAGCACCTACACTGAAAATGCTCAGGTTGTGGCAAATCCTGTTGCGCCTGTCACATATTATGGGCTTCAAGATGGAACAGCACCTGCCGCACCTGTAGTCAGTAGTGTAGACTCACAATTTCACAGTGGGGCTGCTCCTCTTAGCTCTGACAACCTTGCATCTGATCACCCTAGATCTATCAACTCCTTTGAAGAAGTAGGCAGCAGTGGTTCAACTGTGCAGGCTCCATCTACCTCAGCCACAGTCCAAGCATCTGCAACTATTATGGAAAAAGATAATATTGTTCCATTAACTAATTCGGTCTCTACTGCTGCACCTATTCCGGCTACATCAGTGGTTGCGAAGGTTCAATCAAAAGTTGTACGTACTAAAAAGCGGACAATCCCAGCTTCTTCTTCCTTGAGGTCTAATAAGAAAGTCTCCAGTTTGGTAGACAAGTGGAAAGCAGCAAAAGAGGAGTTGCTTGAAGATGAGGAGGAACCTGAGAATACATATGAGTTGCTAGAGAGGAAGCGACAAAGGGAAATAGAGGAATGGTATTCACAACAAATTACGAGTGGAGAGGCCAAAGATAATGCTAATTTTCAACCTTTGGGCGGCAATTGGCGTGAGAAGGTGAAGCGGAGAAAGGCTCAGTTAGCCCGTGAAGCTGCACAGACTGCACCTGAAGCACCTAGTAATGGGAACCAGCAGCCCGATCTAACAGAACATTCAAGGGATCTGCCCTCTGGATGGCAGGTTTACTGGGATGAATCATCGAAGCAGGTTTATTACGGAAATACTGTAACCTCAGAAACTACTTGGACGAGACCAACAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0016604 GO:0016607 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0070013

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

843

Amino Acids

92.62

Weight (kDa)

4.45

Isoelectric Point (pI)

52.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WW	PF00397	130 - 158	5.9e-08	WW domain
WW	PF00397	811 - 841	2.1e-09	WW domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006119)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G13225 AT3G13225 AT3G13225
fragaria_vesca	FvH4_3g42241 FvH4_3g42241 FvH4_3g42241 FvH4_3g42241 FvH4_3g42241 FvH4_3g42241 FvH4_3g42241
malus_domestica	MD03G1035400.v1.1 MD11G1037100.v1.1
prunus_persica	Prupe.6G028400_v2.0.a1 Prupe.6G028400_v2.0.a1
pyrus_communis	pycom03g02760 pycom11g03080
rosa_chinensis	RchiOBHm_Chr5g0075571
rosa_laevigata	RLG00000036576
rosa_multiflora	Rmu_sc0003437.1_g000006
rosa_roxburghii	Rroxscaffold_1G00006000
rosa_rugosa	Rorug05G0440600 Rorug05G0440700
rosa_samantha	Rh5AG497800 Rh5BG518600 Rh5CG542300 Rh5DG530500
rosa_wichuraiana	Rw5G046140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1801
Acc36I	ACCTGC	3 cut(s)	1801, 2437, 2464
AccB7I	CCANNNNNTGG	1 cut(s)	169
AccI	GTMKAC	3 cut(s)	1162, 1818, 2142
AccII	CGCG	1 cut(s)	1415
AclWI	GGATC	6 cut(s)	255, 671, 673, 756, 779, 2436
AcoI	YGGCCR	1 cut(s)	43
AcsI	RAATTY	3 cut(s)	109, 166, 206
AcuI	CTGAAG	4 cut(s)	1035, 1644, 1677, 2397
AdeI	CACNNNGTG	1 cut(s)	1634
AfaI	GTAC	7 cut(s)	316, 366, 553, 782, 1686, 2073, 2077
AfiI	CCNNNNNNNGG	4 cut(s)	169, 2306, 2390, 2442
AflII	CTTAAG	1 cut(s)	878
AflIII	ACRYGT	1 cut(s)	1165
AjiI	CACGTC	1 cut(s)	577
AjnI	CCWGG	3 cut(s)	302, 972, 1630
AluBI	AGCT	6 cut(s)	426, 877, 1310, 1854, 2099, 2360
AluI	AGCT	6 cut(s)	426, 877, 1310, 1854, 2099, 2360
Alw26I	GTCTC	4 cut(s)	1535, 2017, 2134, 2512
AlwI	GGATC	6 cut(s)	255, 671, 673, 756, 779, 2436
AlwNI	CAGNNNCTG	2 cut(s)	1622, 1793
Ama87I	CYCGRG	1 cut(s)	1332
AoxI	GGCC	4 cut(s)	43, 160, 297, 2274
ApeKI	GCWGC	8 cut(s)	31, 98, 1841, 1911, 2021, 2156, 2360, 2401
ApoI	RAATTY	3 cut(s)	109, 166, 206
AseI	ATTAAT	1 cut(s)	900
Asp700I	GAANNNNTTC	2 cut(s)	1443, 1473
AspLEI	GCGC	2 cut(s)	148, 1756
AspS9I	GGNCC	4 cut(s)	160, 298, 627, 741
AsuC2I	CCSGG	3 cut(s)	992, 1333, 1334
AsuHPI	GGTGA	4 cut(s)	302, 389, 1868, 2338
AvaI	CYCGRG	1 cut(s)	1332
AvaII	GGWCC	2 cut(s)	627, 741
AxyI	CCTNAGG	1 cut(s)	606
BalI	TGGCCA	1 cut(s)	45
BbsI	GAAGAC	2 cut(s)	273, 582
BbvCI	CCTCAGC	1 cut(s)	1945
BbvI	GCAGC	8 cut(s)	18, 85, 1828, 1923, 2008, 2168, 2347, 2413
BccI	CCATC	5 cut(s)	65, 617, 1775, 1945, 2436
BcgI	CGANNNNNNTGC	2 cut(s)	176, 210
BciT130I	CCWGG	3 cut(s)	304, 974, 1632
BciVI	GTATCC	3 cut(s)	220, 1078, 1399
BclI	TGATCA	2 cut(s)	253, 1873
BcnI	CCSGG	3 cut(s)	992, 1333, 1334
BcoDI	GTCTC	4 cut(s)	1535, 2017, 2134, 2512
BfaI	CTAG	7 cut(s)	650, 1368, 1394, 1710, 1881, 2213, 2385
BfmI	CTRYAG	4 cut(s)	6, 102, 546, 1803
BfrI	CTTAAG	1 cut(s)	878
BfuAI	ACCTGC	3 cut(s)	1801, 2437, 2464
BfuI	GTATCC	3 cut(s)	220, 1078, 1399
BglII	AGATCT	1 cut(s)	1883
Bme1390I	CCNGG	6 cut(s)	304, 974, 992, 1333, 1334, 1632
Bme18I	GGWCC	2 cut(s)	627, 741
BmeT110I	CYCGRG	1 cut(s)	1332
BmgBI	CACGTC	1 cut(s)	577
BmgT120I	GGNCC	4 cut(s)	160, 298, 627, 741
BmrFI	CCNGG	6 cut(s)	304, 974, 992, 1333, 1334, 1632
BmrI	ACTGGG	3 cut(s)	459, 1587, 2464
BmsI	GCATC	7 cut(s)	85, 396, 644, 849, 962, 1877, 1970
BmuI	ACTGGG	3 cut(s)	459, 1587, 2464
BpiI	GAAGAC	2 cut(s)	273, 582
BplI	GAGNNNNNCTC	4 cut(s)	98, 130, 2326, 2358
BpmI	CTGGAG	3 cut(s)	951, 1413, 2116
Bpu10I	CCTNAGC	2 cut(s)	1731, 1945
BpuEI	CTTGAG	3 cut(s)	471, 908, 2131
BpuMI	CCSGG	3 cut(s)	992, 1333, 1334
BsaAI	YACGTR	2 cut(s)	1684, 2075
BsaBI	GATNNNNATC	2 cut(s)	252, 1290
BsaI	GGTCTC	2 cut(s)	2017, 2512
BsaJI	CCNNGG	7 cut(s)	302, 303, 744, 972, 973, 1195, 1332
BsaXI	ACNNNNNCTCC	2 cut(s)	698, 728
Bsc4I	CCNNNNNNNGG	4 cut(s)	169, 2306, 2390, 2442
Bse21I	CCTNAGG	1 cut(s)	606
Bse3DI	GCAATG	1 cut(s)	1322
Bse8I	GATNNNNATC	2 cut(s)	252, 1290
BseBI	CCWGG	3 cut(s)	304, 974, 1632
BseDI	CCNNGG	7 cut(s)	302, 303, 744, 972, 973, 1195, 1332
BseGI	GGATG	8 cut(s)	73, 628, 659, 864, 1270, 1667, 2447, 2464
BseJI	GATNNNNATC	2 cut(s)	252, 1290
BseLI	CCNNNNNNNGG	4 cut(s)	169, 2306, 2390, 2442
BseMI	GCAATG	1 cut(s)	1322
BseMII	CTCAG	9 cut(s)	134, 215, 620, 1530, 1745, 1959, 2184, 2357, 2514
BseRI	GAGGAG	5 cut(s)	74, 1416, 1836, 2180, 2198
BseXI	GCAGC	8 cut(s)	18, 85, 1828, 1923, 2008, 2168, 2347, 2413
BseYI	CCCAGC	1 cut(s)	2095
BsgI	GTGCAG	5 cut(s)	1722, 1949, 2007, 2346, 2355
Bsh1236I	CGCG	1 cut(s)	1415
BshFI	GGCC	4 cut(s)	45, 162, 299, 2276
BsiHKCI	CYCGRG	1 cut(s)	1332
BsiSI	CCGG	3 cut(s)	992, 1333, 2033
BslFI	GGGAC	2 cut(s)	613, 974
BslI	CCNNNNNNNGG	4 cut(s)	169, 2306, 2390, 2442
BsmAI	GTCTC	4 cut(s)	1535, 2017, 2134, 2512
BsmFI	GGGAC	2 cut(s)	613, 974
BsmI	GAATGC	2 cut(s)	562, 862
BsnI	GGCC	4 cut(s)	45, 162, 299, 2276
Bso31I	GGTCTC	2 cut(s)	2017, 2512
BsoBI	CYCGRG	1 cut(s)	1332
Bsp1407I	TGTACA	1 cut(s)	364
Bsp19I	CCATGG	1 cut(s)	1195
BspANI	GGCC	4 cut(s)	45, 162, 299, 2276
BspCNI	CTCAG	9 cut(s)	133, 214, 619, 1531, 1744, 1958, 2185, 2356, 2513
BspFNI	CGCG	1 cut(s)	1415
BspMAI	CTGCAG	1 cut(s)	10
BspMI	ACCTGC	3 cut(s)	1801, 2437, 2464
BspPI	GGATC	6 cut(s)	255, 671, 673, 756, 779, 2436
BspTI	CTTAAG	1 cut(s)	878
BspTNI	GGTCTC	2 cut(s)	2017, 2512
BsrDI	GCAATG	1 cut(s)	1322
BsrGI	TGTACA	1 cut(s)	364
BssECI	CCNNGG	7 cut(s)	302, 303, 744, 972, 973, 1195, 1332
BssT1I	CCWWGG	2 cut(s)	744, 1195
Bst2UI	CCWGG	3 cut(s)	304, 974, 1632
Bst6I	CTCTTC	1 cut(s)	688
BstAFI	CTTAAG	1 cut(s)	878
BstAPI	GCANNNNNTGC	3 cut(s)	1328, 1634, 2369
BstAUI	TGTACA	1 cut(s)	364
BstBAI	YACGTR	2 cut(s)	1684, 2075
BstC8I	GCNNGC	3 cut(s)	195, 1329, 1932
BstDSI	CCRYGG	1 cut(s)	1195
BstF5I	GGATG	8 cut(s)	73, 628, 659, 864, 1270, 1667, 2447, 2464
BstFNI	CGCG	1 cut(s)	1415
BstHHI	GCGC	2 cut(s)	148, 1756
BstMAI	GTCTC	4 cut(s)	1535, 2017, 2134, 2512
BstMWI	GCNNNNNNNGC	8 cut(s)	883, 1328, 1634, 1796, 2348, 2357, 2369, 2378
BstNI	CCWGG	3 cut(s)	304, 974, 1632
BstNSI	RCATGY	4 cut(s)	1139, 1169, 1331, 1616
BstSCI	CCNGG	6 cut(s)	302, 972, 990, 1331, 1332, 1630
BstSFI	CTRYAG	4 cut(s)	6, 102, 546, 1803
BstSNI	TACGTA	1 cut(s)	2075
BstUI	CGCG	1 cut(s)	1415
BstV1I	GCAGC	8 cut(s)	18, 85, 1828, 1923, 2008, 2168, 2347, 2413
BstV2I	GAAGAC	2 cut(s)	273, 582
BstX2I	RGATCY	2 cut(s)	1883, 2428
BstYI	RGATCY	2 cut(s)	1883, 2428
Bsu36I	CCTNAGG	1 cut(s)	606
BsuI	GTATCC	3 cut(s)	220, 1078, 1399
BsuRI	GGCC	4 cut(s)	45, 162, 299, 2276
BtgI	CCRYGG	1 cut(s)	1195
BtgZI	GCGATG	2 cut(s)	201, 1374
BtrI	CACGTC	1 cut(s)	577
BtsCI	GGATG	8 cut(s)	73, 628, 659, 864, 1270, 1667, 2447, 2464
BtsI	GCAGTG	2 cut(s)	1341, 1921
BtsIMutI	CAGTG	8 cut(s)	242, 277, 1341, 1653, 1719, 1840, 1921, 2049
BveI	ACCTGC	3 cut(s)	1801, 2437, 2464
Cac8I	GCNNGC	3 cut(s)	195, 1329, 1932
CaiI	CAGNNNCTG	2 cut(s)	1622, 1793
CfoI	GCGC	2 cut(s)	148, 1756
Cfr13I	GGNCC	4 cut(s)	160, 298, 627, 741
Cfr9I	CCCGGG	1 cut(s)	1332
CsiI	ACCWGGT	1 cut(s)	1630
Csp6I	GTAC	7 cut(s)	315, 365, 552, 781, 1685, 2072, 2076
CviQI	GTAC	7 cut(s)	315, 365, 552, 781, 1685, 2072, 2076
DraIII	CACNNNGTG	1 cut(s)	1634
EaeI	YGGCCR	1 cut(s)	43
Eam1104I	CTCTTC	1 cut(s)	688
EarI	CTCTTC	1 cut(s)	688
EciI	GGCGGA	1 cut(s)	1470
Eco105I	TACGTA	1 cut(s)	2075
Eco130I	CCWWGG	2 cut(s)	744, 1195
Eco31I	GGTCTC	2 cut(s)	2017, 2512
Eco47I	GGWCC	2 cut(s)	627, 741
Eco57I	CTGAAG	4 cut(s)	1035, 1644, 1677, 2397
Eco81I	CCTNAGG	1 cut(s)	606
Eco88I	CYCGRG	1 cut(s)	1332
EcoO109I	RGGNCCY	1 cut(s)	627
EcoRI	GAATTC	1 cut(s)	109
EcoRII	CCWGG	3 cut(s)	302, 972, 1630
EcoT14I	CCWWGG	2 cut(s)	744, 1195
EcoT22I	ATGCAT	3 cut(s)	411, 864, 1324
ErhI	CCWWGG	2 cut(s)	744, 1195
FaqI	GGGAC	2 cut(s)	613, 974
FauNDI	CATATG	1 cut(s)	2203
FbaI	TGATCA	2 cut(s)	253, 1873
FblI	GTMKAC	3 cut(s)	1162, 1818, 2142
FokI	GGATG	8 cut(s)	80, 635, 666, 871, 1277, 1674, 2454, 2471
FspBI	CTAG	7 cut(s)	650, 1368, 1394, 1710, 1881, 2213, 2385
GlaI	GCGC	2 cut(s)	147, 1755
GsaI	CCCAGC	1 cut(s)	2099
GsuI	CTGGAG	3 cut(s)	951, 1413, 2116
HaeIII	GGCC	4 cut(s)	45, 162, 299, 2276
HapII	CCGG	3 cut(s)	992, 1333, 2033
HhaI	GCGC	2 cut(s)	148, 1756
Hin6I	GCGC	2 cut(s)	146, 1754
HinP1I	GCGC	2 cut(s)	146, 1754
HincII	GTYRAC	4 cut(s)	501, 766, 1221, 1258
HindII	GTYRAC	4 cut(s)	501, 766, 1221, 1258
HpaI	GTTAAC	1 cut(s)	501
HpaII	CCGG	3 cut(s)	992, 1333, 2033
HphI	GGTGA	4 cut(s)	302, 389, 1868, 2338
Hpy188III	TCNNGA	8 cut(s)	251, 856, 930, 1103, 1211, 1430, 1778, 2439
HpyAV	CCTTC	6 cut(s)	525, 578, 1386, 1652, 2047, 2317
HpyCH4IV	ACGT	3 cut(s)	576, 1683, 2074
HpyF10VI	GCNNNNNNNGC	8 cut(s)	883, 1328, 1634, 1796, 2348, 2357, 2369, 2378
HpySE526I	ACGT	3 cut(s)	576, 1683, 2074
HspAI	GCGC	2 cut(s)	146, 1754
KflI	GGGWCCC	1 cut(s)	627
Ksp22I	TGATCA	2 cut(s)	253, 1873
KspAI	GTTAAC	1 cut(s)	501
LmnI	GCTCC	3 cut(s)	1157, 1849, 1939
Lsp1109I	GCAGC	8 cut(s)	18, 85, 1828, 1923, 2008, 2168, 2347, 2413
LweI	GCATC	7 cut(s)	85, 396, 644, 849, 962, 1877, 1970
MabI	ACCWGGT	1 cut(s)	1630
MaeI	CTAG	7 cut(s)	650, 1368, 1394, 1710, 1881, 2213, 2385
MaeII	ACGT	3 cut(s)	576, 1683, 2074
MaeIII	GTNAC	5 cut(s)	506, 819, 1574, 1759, 2494
MfeI	CAATTG	2 cut(s)	1146, 2311
MflI	RGATCY	2 cut(s)	1883, 2428
MlsI	TGGCCA	1 cut(s)	45
MluNI	TGGCCA	1 cut(s)	45
MlyI	GAGTC	3 cut(s)	1109, 1226, 1814
MmeI	TCCRAC	3 cut(s)	45, 374, 939
Mox20I	TGGCCA	1 cut(s)	45
Mph1103I	ATGCAT	3 cut(s)	411, 864, 1324
MroXI	GAANNNNTTC	2 cut(s)	1443, 1473
MscI	TGGCCA	1 cut(s)	45
MseI	TTAA	9 cut(s)	138, 150, 500, 879, 900, 924, 1110, 1227, 2000
MslI	CAYNNNNRTG	1 cut(s)	1265
Msp20I	TGGCCA	1 cut(s)	45
MspA1I	CMGCKG	1 cut(s)	31
MspCI	CTTAAG	1 cut(s)	878
MspI	CCGG	3 cut(s)	992, 1333, 2033
MspR9I	CCNGG	6 cut(s)	304, 974, 992, 1333, 1334, 1632
MunI	CAATTG	2 cut(s)	1146, 2311
Mva1269I	GAATGC	2 cut(s)	562, 862
MvaI	CCWGG	3 cut(s)	304, 974, 1632
MvnI	CGCG	1 cut(s)	1415
MwoI	GCNNNNNNNGC	8 cut(s)	883, 1328, 1634, 1796, 2348, 2357, 2369, 2378
NciI	CCSGG	3 cut(s)	992, 1333, 1334
NcoI	CCATGG	1 cut(s)	1195
NdeI	CATATG	1 cut(s)	2203
NmuCI	GTSAC	3 cut(s)	506, 819, 1759
NsiI	ATGCAT	3 cut(s)	411, 864, 1324
NspI	RCATGY	4 cut(s)	1139, 1169, 1331, 1616
PaeI	GCATGC	1 cut(s)	1331
PaqCI	CACCTGC	1 cut(s)	1801
PasI	CCCWGGG	2 cut(s)	303, 973
PciI	ACATGT	1 cut(s)	1165
PctI	GAATGC	2 cut(s)	562, 862
PdmI	GAANNNNTTC	2 cut(s)	1443, 1473
PfeI	GAWTC	7 cut(s)	239, 538, 646, 935, 1286, 1444, 2462
PflMI	CCANNNNNTGG	1 cut(s)	169
PfoI	TCCNGGA	1 cut(s)	990
PleI	GAGTC	3 cut(s)	1109, 1225, 1814
PpsI	GAGTC	3 cut(s)	1109, 1225, 1814
Ppu21I	YACGTR	2 cut(s)	1684, 2075
PpuMI	RGGWCCY	1 cut(s)	627
PscI	ACATGT	1 cut(s)	1165
PshBI	ATTAAT	1 cut(s)	900
Psp5II	RGGWCCY	1 cut(s)	627
Psp6I	CCWGG	3 cut(s)	302, 972, 1630
PspFI	CCCAGC	1 cut(s)	2095
PspGI	CCWGG	3 cut(s)	302, 972, 1630
PspPI	GGNCC	4 cut(s)	160, 298, 627, 741
PspPPI	RGGWCCY	1 cut(s)	627
PstI	CTGCAG	1 cut(s)	10
PstNI	CAGNNNCTG	2 cut(s)	1622, 1793
PsuI	RGATCY	2 cut(s)	1883, 2428
RsaI	GTAC	7 cut(s)	316, 366, 553, 782, 1686, 2073, 2077
RsaNI	GTAC	7 cut(s)	315, 365, 552, 781, 1685, 2072, 2076
RseI	CAYNNNNRTG	1 cut(s)	1265
SaqAI	TTAA	9 cut(s)	138, 150, 500, 879, 900, 924, 1110, 1227, 2000
Sau96I	GGNCC	4 cut(s)	160, 298, 627, 741
SchI	GAGTC	3 cut(s)	1109, 1226, 1814
ScrFI	CCNGG	6 cut(s)	304, 974, 992, 1333, 1334, 1632
SexAI	ACCWGGT	1 cut(s)	1630
SfaNI	GCATC	7 cut(s)	85, 396, 644, 849, 962, 1877, 1970
SfcI	CTRYAG	4 cut(s)	6, 102, 546, 1803
SinI	GGWCC	2 cut(s)	627, 741
SmaI	CCCGGG	1 cut(s)	1334
SmiMI	CAYNNNNRTG	1 cut(s)	1265
SmlI	CTYRAG	4 cut(s)	486, 878, 887, 2110
SmoI	CTYRAG	4 cut(s)	486, 878, 887, 2110
SnaBI	TACGTA	1 cut(s)	2075
SphI	GCATGC	1 cut(s)	1331
SspI	AATATT	2 cut(s)	1604, 1990
SspMI	CTAG	7 cut(s)	650, 1368, 1394, 1710, 1881, 2213, 2385
StyD4I	CCNGG	6 cut(s)	302, 972, 990, 1331, 1332, 1630
StyI	CCWWGG	2 cut(s)	744, 1195
TaiI	ACGT	3 cut(s)	579, 1686, 2077
TaqI	TCGA	3 cut(s)	1024, 1420, 2468
TaqII	GACCGA	1 cut(s)	1999
TatI	WGTACW	2 cut(s)	364, 780
TauI	GCSGC	4 cut(s)	186, 886, 1799, 2310
TfiI	GAWTC	7 cut(s)	239, 538, 646, 935, 1286, 1444, 2462
Tru1I	TTAA	9 cut(s)	138, 150, 500, 879, 900, 924, 1110, 1227, 2000
Tru9I	TTAA	9 cut(s)	138, 150, 500, 879, 900, 924, 1110, 1227, 2000
TscAI	CASTG	8 cut(s)	249, 277, 1348, 1660, 1726, 1840, 1921, 2049
TseFI	GTSAC	3 cut(s)	506, 819, 1759
TseI	GCWGC	8 cut(s)	31, 98, 1841, 1911, 2021, 2156, 2360, 2401
Tsp45I	GTSAC	3 cut(s)	506, 819, 1759
TspGWI	ACGGA	4 cut(s)	302, 719, 1518, 2499
TspMI	CCCGGG	1 cut(s)	1332
TspRI	CASTG	8 cut(s)	249, 277, 1348, 1660, 1726, 1840, 1921, 2049
Van91I	CCANNNNNTGG	1 cut(s)	169
Vha464I	CTTAAG	1 cut(s)	878
VpaK11BI	GGWCC	2 cut(s)	627, 741
VspI	ATTAAT	1 cut(s)	900
XapI	RAATTY	3 cut(s)	109, 166, 206
XceI	RCATGY	4 cut(s)	1139, 1169, 1331, 1616
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1437
XmaI	CCCGGG	1 cut(s)	1332
XmiI	GTMKAC	3 cut(s)	1162, 1818, 2142
XmnI	GAANNNNTTC	2 cut(s)	1443, 1473
XspI	CTAG	7 cut(s)	650, 1368, 1394, 1710, 1881, 2213, 2385
Zsp2I	ATGCAT	3 cut(s)	411, 864, 1324

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.