Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0006119

Physical Location & Seq

Genomic Coordinates Forward (+)

80224558 .. 80230090

Gene Structure 5533 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G046140.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2529 bp

ATGTCTGCAGGTCAGCAACCAGAAAATCCACTGCTTTTACTTGGCCAGTATAGTGATGAGGAGTTGGATGATGGCTCAAATAAAACTCTTAGTGATGCTGCTGTAGAGAATTCCTCGCCTCAGAATAATGATGAGGTTAAGAGTGCGCTTAATGAATTGGGCCAGAATTTGGACATCATAGGCGGCGATGAGCCTGCTTCTCAGAAATTCAATCAAAAGGAAGTGGATACGAACTCTGATACACTGGATCGTGATCAGAGCATGGAAGACACTGATAAAAGAGAAAATGGTGATCTGGCCCCCAGGGATTTCCGTACAGAAGTGGATTTGACAGAGAAAGTTTCTTTGCCTGAAAGTTCTAATGTACAAGTCATTGGTGATGTCAGTTCAGGTTGGAAGATTGTGATGCATGAAGAAAGTAAAAGCTATTATTACTGGAATACTGAAACTGGGGAAACTTCATGGGAAGTGCCTGATGTTTTGGCTCAAGCAACCAAGTTAACCTGTGACCAGCCTTCTGTTGATGAAAAGCCAGAGAATGTACCTGTAGGTACACAAGAGCATTCTAATTCTGACGTGATTGAAGGGTCTTCCAATATGGTTCCTCAGGGCATATATGGGGATGGGTCCCAGATGAATGACTGGAATCTAGGATGCCATAATGGATCAGAGATTGATCCCTCTTCTCATCTTGTAAAATATACGGAGGCTTTGTTAGAGAGATTGAAGTTGCTACAACGGTCCAAGGATCAAGTGCAAGGCGTTGACTGGATCACAAAGTACATTTTGGAAGTTGAAATTAGACTGTTTGATTTGAAGTCACTTTTTTCCTATGGGTCATCTCTGCTTCCATTCTGGATGCATTCTGAAATACAGCTTAAGCGGCTTGAGAGTGGTATTAATGATGAAATGTCCAACATTGTTAAGTCTGGAGAATCAAATGAAGTTGAGGCATCTCATACATCATTCTCCCAGGGAGAAATAAATGTCCCGGAAAGCATGGGGTCTAAAACTGAAGTAGATCGAGCAGAAAATAAGCAACTTATGTCCTCTCTAAATGATTATCAGGGTTCTCTTAGTGCGGATACAGTCAATGAAGATCAAGAAGTTAAAGACTCCATTGTAAAAAATGAGCATGTTTCTGCAATTGGCTCCCCAAGTATACATATGGAGGTTGGTGCAAGTGAACAAGTCCATGGGATGGTAGTTCCTGATGAGTCAACTATTAAGAATGATGTTTGTGCTGTGGAAGATGTTGACATGGATGTGGACATGGAAGTTGAAGATTCAAATCCAGCAGGAAATACAGCTATTTCTTATGCATTGCATGCCCAGGAGTTCACTGCAACAGAACAGCCAAATCAGTCTAGTCCACCTTCCCTATATACATCGCTAGTTTCAGAGGATACTTTCGCTGTTCGACCTCCTCCAGATGAGGAATGGATTCCTCCACCCCCACCTGATAATGAACAGGTTCCTCCGCCTCCACCTGATGAGCCACCACCTGAACCTCCATATCCTCCACTTCCGTCTTACTCTGAGACAGGACAACCTCCCTATGCAGAACAGTATAGTTACTCCTATCCAGTTCCCAGTTTTGAATATTATGGACATGCAGTTACTGAAGCACCTGGTGCTAATTATTATGGACACACTGAAGGATGTCAAGTTGCTATACCCCACGTACCAGTTTACTATGGTGCAGTTCCTAGCACCTACACTGAAAATGCTCAGGTTGTGGCAAATCCTGTTGCACCTGTCACATATTATGGGCTTCAAGATGGAACAGTACCTGCTGCACCTGTAGTCAGTAGTGTAGACTCACAATTTCCCAGTGGGGCTGTTCCTCTTAGCTCTGACAACCTTGCATCTGATCACCCTAGATCTATCAACTCCTTTGAAGAAGTAGGCAGCAGTGGTTCAACTGTGCAGGCTCCTTCTACCTCAGCCACAGTCCAAGCATCTGCAACTATTATGGAAAAAGATACTATTGTTCCATTAACTAATTCGGTCTCTACTGCTGCACCTATTCCGGCTACATCAGTGGTTGCGAAGGTTCAATCAAAAGTTGTACGTACTAAAAAGCGGACAATCCCAGCTTCTTCTTCCTTGAGGTCTAATAAGAAAGTCTCCAGTTTGGTAGACAAGTGGAAAGCAGCGAAAGAGGAGTTGCTTGAAGATGAGGAGGAACCTGAGAATACATATGAGTTGCTAGAGAGGAAGCGACAAAGGGAAATAGAGGAATGGTATTCACAACAAATTACGAGTGGAGAGGCCAAAGATAATGCTAATTTTCAACCTTTGGGCGGCAATTGGCGTGAGAAGGTGAAGCGAAGAAAGGCTCAGTTAGCCCGTGAAGCTGCACAGACTGCACCTGAAGCAGCTAGTAATGGGAACCAGCAGCCCAATCTAACAGAACTTTCAAGGGATCTGCCCTCTGGATGGCAGGTTTACTGGGATGAATCATCGAAGCAGGTTTATTACGGAAATACTGTAACCTCAGAAACTACTTGGACGAGACCAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0016604 GO:0016607 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0070013

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

842

Amino Acids

92.46

Weight (kDa)

4.4

Isoelectric Point (pI)

52.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WW	PF00397	130 - 158	5.9e-08	WW domain
WW	PF00397	811 - 841	2.1e-09	WW domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006119)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G13225 AT3G13225 AT3G13225
fragaria_vesca	FvH4_3g42241 FvH4_3g42241 FvH4_3g42241 FvH4_3g42241 FvH4_3g42241 FvH4_3g42241 FvH4_3g42241
malus_domestica	MD03G1035400.v1.1 MD11G1037100.v1.1
prunus_persica	Prupe.6G028400_v2.0.a1 Prupe.6G028400_v2.0.a1
pyrus_communis	pycom03g02760 pycom11g03080
rosa_chinensis	RchiOBHm_Chr5g0075571
rosa_laevigata	RLG00000036576
rosa_multiflora	Rmu_sc0003437.1_g000006
rosa_roxburghii	Rroxscaffold_1G00006000
rosa_rugosa	Rorug05G0440600 Rorug05G0440700
rosa_samantha	Rh5AG497800 Rh5BG518600 Rh5CG542300 Rh5DG530500
rosa_wichuraiana	Rw5G046140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	3 cut(s)	1801, 2437, 2464
AccB7I	CCANNNNNTGG	2 cut(s)	169, 1201
AccI	GTMKAC	3 cut(s)	1162, 1818, 2142
AciI	CCGC	6 cut(s)	183, 883, 1082, 1481, 2086, 2307
AclWI	GGATC	6 cut(s)	255, 671, 673, 756, 779, 2436
AcoI	YGGCCR	1 cut(s)	43
AcsI	RAATTY	3 cut(s)	109, 166, 206
AcuI	CTGAAG	4 cut(s)	1035, 1644, 1677, 2397
AdeI	CACNNNGTG	1 cut(s)	1634
AfaI	GTAC	9 cut(s)	316, 366, 543, 553, 782, 1686, 1791, 2073, 2077
AfiI	CCNNNNNNNGG	4 cut(s)	169, 1201, 2306, 2442
AflII	CTTAAG	1 cut(s)	878
AjiI	CACGTC	1 cut(s)	577
AjnI	CCWGG	4 cut(s)	302, 972, 1332, 1630
AluBI	AGCT	7 cut(s)	426, 877, 1310, 1854, 2099, 2360, 2384
AluI	AGCT	7 cut(s)	426, 877, 1310, 1854, 2099, 2360, 2384
Alw26I	GTCTC	4 cut(s)	1535, 2017, 2134, 2512
AlwI	GGATC	6 cut(s)	255, 671, 673, 756, 779, 2436
AlwNI	CAGNNNCTG	2 cut(s)	1622, 1793
AoxI	GGCC	4 cut(s)	43, 160, 297, 2274
ApeKI	GCWGC	8 cut(s)	98, 1796, 1911, 2021, 2156, 2360, 2381, 2401
ApoI	RAATTY	3 cut(s)	109, 166, 206
AseI	ATTAAT	1 cut(s)	900
Asp700I	GAANNNNTTC	2 cut(s)	1443, 1473
AspLEI	GCGC	1 cut(s)	148
AspS9I	GGNCC	4 cut(s)	160, 298, 627, 741
AsuC2I	CCSGG	1 cut(s)	992
AsuHPI	GGTGA	4 cut(s)	302, 389, 1868, 2338
AvaII	GGWCC	2 cut(s)	627, 741
AxyI	CCTNAGG	1 cut(s)	606
BaeI	ACNNNNGTAYC	2 cut(s)	1977, 2010
BalI	TGGCCA	1 cut(s)	45
BbsI	GAAGAC	2 cut(s)	273, 582
BbvCI	CCTCAGC	1 cut(s)	1945
BbvI	GCAGC	8 cut(s)	85, 1783, 1923, 2008, 2168, 2347, 2393, 2413
BccI	CCATC	5 cut(s)	65, 617, 1195, 1775, 2436
BcgI	CGANNNNNNTGC	2 cut(s)	176, 210
BciT130I	CCWGG	4 cut(s)	304, 974, 1334, 1632
BciVI	GTATCC	3 cut(s)	220, 1078, 1399
BclI	TGATCA	2 cut(s)	253, 1873
BcnI	CCSGG	1 cut(s)	992
BcoDI	GTCTC	4 cut(s)	1535, 2017, 2134, 2512
BfaI	CTAG	7 cut(s)	650, 1368, 1394, 1710, 1881, 2213, 2385
BfmI	CTRYAG	4 cut(s)	6, 102, 546, 1803
BfrI	CTTAAG	1 cut(s)	878
BfuAI	ACCTGC	3 cut(s)	1801, 2437, 2464
BfuI	GTATCC	3 cut(s)	220, 1078, 1399
BglII	AGATCT	1 cut(s)	1883
Bme1390I	CCNGG	5 cut(s)	304, 974, 992, 1334, 1632
Bme18I	GGWCC	2 cut(s)	627, 741
BmgBI	CACGTC	1 cut(s)	577
BmgT120I	GGNCC	4 cut(s)	160, 298, 627, 741
BmiI	GGNNCC	9 cut(s)	300, 603, 628, 629, 1153, 1476, 1935, 2190, 2396
BmrFI	CCNGG	5 cut(s)	304, 974, 992, 1334, 1632
BmrI	ACTGGG	4 cut(s)	459, 1587, 1827, 2464
BmsI	GCATC	7 cut(s)	85, 396, 644, 849, 962, 1877, 1970
BmuI	ACTGGG	4 cut(s)	459, 1587, 1827, 2464
BpiI	GAAGAC	2 cut(s)	273, 582
BplI	GAGNNNNNCTC	2 cut(s)	98, 130
BpmI	CTGGAG	3 cut(s)	951, 1413, 2116
Bpu10I	CCTNAGC	2 cut(s)	1731, 1945
BpuEI	CTTGAG	3 cut(s)	471, 908, 2131
BpuMI	CCSGG	1 cut(s)	992
BsaAI	YACGTR	2 cut(s)	1684, 2075
BsaBI	GATNNNNATC	2 cut(s)	252, 1290
BsaI	GGTCTC	2 cut(s)	2017, 2512
BsaJI	CCNNGG	7 cut(s)	302, 303, 744, 972, 973, 1195, 1332
BsaXI	ACNNNNNCTCC	2 cut(s)	698, 728
Bsc4I	CCNNNNNNNGG	4 cut(s)	169, 1201, 2306, 2442
Bse21I	CCTNAGG	1 cut(s)	606
Bse3DI	GCAATG	1 cut(s)	1322
Bse8I	GATNNNNATC	2 cut(s)	252, 1290
BseBI	CCWGG	4 cut(s)	304, 974, 1334, 1632
BseDI	CCNNGG	7 cut(s)	302, 303, 744, 972, 973, 1195, 1332
BseGI	GGATG	9 cut(s)	73, 628, 659, 864, 1206, 1270, 1667, 2447, 2464
BseJI	GATNNNNATC	2 cut(s)	252, 1290
BseLI	CCNNNNNNNGG	4 cut(s)	169, 1201, 2306, 2442
BseMI	GCAATG	1 cut(s)	1322
BseMII	CTCAG	9 cut(s)	134, 215, 620, 1530, 1745, 1959, 2184, 2357, 2514
BseRI	GAGGAG	4 cut(s)	74, 1416, 2180, 2198
BseXI	GCAGC	8 cut(s)	85, 1783, 1923, 2008, 2168, 2347, 2393, 2413
BseYI	CCCAGC	1 cut(s)	2095
BsgI	GTGCAG	6 cut(s)	1722, 1782, 1949, 2007, 2346, 2355
BshFI	GGCC	4 cut(s)	45, 162, 299, 2276
BsiSI	CCGG	2 cut(s)	992, 2033
BslFI	GGGAC	2 cut(s)	613, 974
BslI	CCNNNNNNNGG	4 cut(s)	169, 1201, 2306, 2442
BsmAI	GTCTC	4 cut(s)	1535, 2017, 2134, 2512
BsmFI	GGGAC	2 cut(s)	613, 974
BsmI	GAATGC	2 cut(s)	562, 862
BsnI	GGCC	4 cut(s)	45, 162, 299, 2276
Bso31I	GGTCTC	2 cut(s)	2017, 2512
Bsp1407I	TGTACA	1 cut(s)	364
Bsp19I	CCATGG	1 cut(s)	1195
BspACI	CCGC	6 cut(s)	183, 883, 1082, 1481, 2086, 2307
BspANI	GGCC	4 cut(s)	45, 162, 299, 2276
BspCNI	CTCAG	9 cut(s)	133, 214, 619, 1531, 1744, 1958, 2185, 2356, 2513
BspLI	GGNNCC	9 cut(s)	300, 603, 628, 629, 1153, 1476, 1935, 2190, 2396
BspMAI	CTGCAG	1 cut(s)	10
BspMI	ACCTGC	3 cut(s)	1801, 2437, 2464
BspPI	GGATC	6 cut(s)	255, 671, 673, 756, 779, 2436
BspTI	CTTAAG	1 cut(s)	878
BspTNI	GGTCTC	2 cut(s)	2017, 2512
BsrDI	GCAATG	1 cut(s)	1322
BsrGI	TGTACA	1 cut(s)	364
BssECI	CCNNGG	7 cut(s)	302, 303, 744, 972, 973, 1195, 1332
BssNAI	GTATAC	1 cut(s)	1163
BssT1I	CCWWGG	2 cut(s)	744, 1195
Bst1107I	GTATAC	1 cut(s)	1163
Bst2UI	CCWGG	4 cut(s)	304, 974, 1334, 1632
Bst4CI	ACNGT	8 cut(s)	741, 807, 1090, 1569, 1789, 1927, 1954, 2494
Bst6I	CTCTTC	1 cut(s)	688
BstAFI	CTTAAG	1 cut(s)	878
BstAPI	GCANNNNNTGC	3 cut(s)	1328, 1634, 2369
BstAUI	TGTACA	1 cut(s)	364
BstBAI	YACGTR	2 cut(s)	1684, 2075
BstC8I	GCNNGC	3 cut(s)	195, 1329, 1932
BstDSI	CCRYGG	1 cut(s)	1195
BstF5I	GGATG	9 cut(s)	73, 628, 659, 864, 1206, 1270, 1667, 2447, 2464
BstHHI	GCGC	1 cut(s)	148
BstMAI	GTCTC	4 cut(s)	1535, 2017, 2134, 2512
BstMWI	GCNNNNNNNGC	7 cut(s)	883, 1328, 1634, 2348, 2357, 2369, 2378
BstNI	CCWGG	4 cut(s)	304, 974, 1334, 1632
BstNSI	RCATGY	3 cut(s)	1139, 1331, 1616
BstSCI	CCNGG	5 cut(s)	302, 972, 990, 1332, 1630
BstSFI	CTRYAG	4 cut(s)	6, 102, 546, 1803
BstSNI	TACGTA	1 cut(s)	2075
BstV1I	GCAGC	8 cut(s)	85, 1783, 1923, 2008, 2168, 2347, 2393, 2413
BstV2I	GAAGAC	2 cut(s)	273, 582
BstX2I	RGATCY	2 cut(s)	1883, 2428
BstYI	RGATCY	2 cut(s)	1883, 2428
BstZ17I	GTATAC	1 cut(s)	1163
Bsu36I	CCTNAGG	1 cut(s)	606
BsuI	GTATCC	3 cut(s)	220, 1078, 1399
BsuRI	GGCC	4 cut(s)	45, 162, 299, 2276
BtgI	CCRYGG	1 cut(s)	1195
BtgZI	GCGATG	2 cut(s)	201, 1374
BtrI	CACGTC	1 cut(s)	577
BtsCI	GGATG	9 cut(s)	73, 628, 659, 864, 1206, 1270, 1667, 2447, 2464
BtsI	GCAGTG	3 cut(s)	29, 1341, 1921
BtsIMutI	CAGTG	9 cut(s)	29, 242, 270, 1341, 1653, 1719, 1840, 1921, 2049
BveI	ACCTGC	3 cut(s)	1801, 2437, 2464
Cac8I	GCNNGC	3 cut(s)	195, 1329, 1932
CaiI	CAGNNNCTG	2 cut(s)	1622, 1793
CfoI	GCGC	1 cut(s)	148
Cfr13I	GGNCC	4 cut(s)	160, 298, 627, 741
CsiI	ACCWGGT	1 cut(s)	1630
Csp6I	GTAC	9 cut(s)	315, 365, 542, 552, 781, 1685, 1790, 2072, 2076
CviQI	GTAC	9 cut(s)	315, 365, 542, 552, 781, 1685, 1790, 2072, 2076
DraIII	CACNNNGTG	1 cut(s)	1634
EaeI	YGGCCR	1 cut(s)	43
Eam1104I	CTCTTC	1 cut(s)	688
EarI	CTCTTC	1 cut(s)	688
EciI	GGCGGA	1 cut(s)	1470
Eco105I	TACGTA	1 cut(s)	2075
Eco130I	CCWWGG	2 cut(s)	744, 1195
Eco31I	GGTCTC	2 cut(s)	2017, 2512
Eco47I	GGWCC	2 cut(s)	627, 741
Eco57I	CTGAAG	4 cut(s)	1035, 1644, 1677, 2397
Eco81I	CCTNAGG	1 cut(s)	606
EcoO109I	RGGNCCY	1 cut(s)	627
EcoRI	GAATTC	1 cut(s)	109
EcoRII	CCWGG	4 cut(s)	302, 972, 1332, 1630
EcoT14I	CCWWGG	2 cut(s)	744, 1195
EcoT22I	ATGCAT	3 cut(s)	411, 864, 1324
ErhI	CCWWGG	2 cut(s)	744, 1195
FaqI	GGGAC	2 cut(s)	613, 974
FauNDI	CATATG	2 cut(s)	1167, 2203
FbaI	TGATCA	2 cut(s)	253, 1873
FblI	GTMKAC	3 cut(s)	1162, 1818, 2142
FokI	GGATG	9 cut(s)	80, 635, 666, 871, 1213, 1277, 1674, 2454, 2471
FspBI	CTAG	7 cut(s)	650, 1368, 1394, 1710, 1881, 2213, 2385
GlaI	GCGC	1 cut(s)	147
GsaI	CCCAGC	1 cut(s)	2099
GsuI	CTGGAG	3 cut(s)	951, 1413, 2116
HaeIII	GGCC	4 cut(s)	45, 162, 299, 2276
HapII	CCGG	2 cut(s)	992, 2033
HhaI	GCGC	1 cut(s)	148
Hin6I	GCGC	1 cut(s)	146
HinP1I	GCGC	1 cut(s)	146
HincII	GTYRAC	4 cut(s)	501, 766, 1221, 1258
HindII	GTYRAC	4 cut(s)	501, 766, 1221, 1258
HinfI	GANTC	8 cut(s)	646, 935, 1115, 1217, 1286, 1444, 1820, 2462
HpaI	GTTAAC	1 cut(s)	501
HpaII	CCGG	2 cut(s)	992, 2033
HphI	GGTGA	4 cut(s)	302, 389, 1868, 2338
Hpy188III	TCNNGA	8 cut(s)	251, 856, 930, 1103, 1211, 1430, 1778, 2439
HpyAV	CCTTC	7 cut(s)	525, 578, 1386, 1652, 1947, 2047, 2317
HpyCH4III	ACNGT	8 cut(s)	741, 807, 1090, 1569, 1789, 1927, 1954, 2494
HpyCH4IV	ACGT	3 cut(s)	576, 1683, 2074
HpyF10VI	GCNNNNNNNGC	7 cut(s)	883, 1328, 1634, 2348, 2357, 2369, 2378
HpySE526I	ACGT	3 cut(s)	576, 1683, 2074
HspAI	GCGC	1 cut(s)	146
KflI	GGGWCCC	1 cut(s)	627
Ksp22I	TGATCA	2 cut(s)	253, 1873
KspAI	GTTAAC	1 cut(s)	501
LmnI	GCTCC	2 cut(s)	1157, 1939
Lsp1109I	GCAGC	8 cut(s)	85, 1783, 1923, 2008, 2168, 2347, 2393, 2413
LweI	GCATC	7 cut(s)	85, 396, 644, 849, 962, 1877, 1970
MabI	ACCWGGT	1 cut(s)	1630
MaeI	CTAG	7 cut(s)	650, 1368, 1394, 1710, 1881, 2213, 2385
MaeII	ACGT	3 cut(s)	576, 1683, 2074
MaeIII	GTNAC	6 cut(s)	506, 819, 1574, 1618, 1759, 2494
MfeI	CAATTG	2 cut(s)	1146, 2311
MflI	RGATCY	2 cut(s)	1883, 2428
MlsI	TGGCCA	1 cut(s)	45
MluNI	TGGCCA	1 cut(s)	45
MlyI	GAGTC	3 cut(s)	1109, 1226, 1814
MmeI	TCCRAC	3 cut(s)	45, 374, 939
Mox20I	TGGCCA	1 cut(s)	45
Mph1103I	ATGCAT	3 cut(s)	411, 864, 1324
MroXI	GAANNNNTTC	2 cut(s)	1443, 1473
MscI	TGGCCA	1 cut(s)	45
MseI	TTAA	9 cut(s)	138, 150, 500, 879, 900, 924, 1110, 1227, 2000
MslI	CAYNNNNRTG	1 cut(s)	1265
Msp20I	TGGCCA	1 cut(s)	45
MspCI	CTTAAG	1 cut(s)	878
MspI	CCGG	2 cut(s)	992, 2033
MspR9I	CCNGG	5 cut(s)	304, 974, 992, 1334, 1632
MunI	CAATTG	2 cut(s)	1146, 2311
Mva1269I	GAATGC	2 cut(s)	562, 862
MvaI	CCWGG	4 cut(s)	304, 974, 1334, 1632
MwoI	GCNNNNNNNGC	7 cut(s)	883, 1328, 1634, 2348, 2357, 2369, 2378
NciI	CCSGG	1 cut(s)	992
NcoI	CCATGG	1 cut(s)	1195
NdeI	CATATG	2 cut(s)	1167, 2203
NlaIV	GGNNCC	9 cut(s)	300, 603, 628, 629, 1153, 1476, 1935, 2190, 2396
NmuCI	GTSAC	3 cut(s)	506, 819, 1759
NsiI	ATGCAT	3 cut(s)	411, 864, 1324
NspI	RCATGY	3 cut(s)	1139, 1331, 1616
PaeI	GCATGC	1 cut(s)	1331
PasI	CCCWGGG	2 cut(s)	303, 973
PctI	GAATGC	2 cut(s)	562, 862
PdmI	GAANNNNTTC	2 cut(s)	1443, 1473
PfeI	GAWTC	5 cut(s)	646, 935, 1286, 1444, 2462
PflMI	CCANNNNNTGG	2 cut(s)	169, 1201
PfoI	TCCNGGA	1 cut(s)	990
PleI	GAGTC	3 cut(s)	1109, 1225, 1814
PpsI	GAGTC	3 cut(s)	1109, 1225, 1814
Ppu21I	YACGTR	2 cut(s)	1684, 2075
PpuMI	RGGWCCY	1 cut(s)	627
PshBI	ATTAAT	1 cut(s)	900
Psp5II	RGGWCCY	1 cut(s)	627
Psp6I	CCWGG	4 cut(s)	302, 972, 1332, 1630
PspFI	CCCAGC	1 cut(s)	2095
PspGI	CCWGG	4 cut(s)	302, 972, 1332, 1630
PspN4I	GGNNCC	9 cut(s)	300, 603, 628, 629, 1153, 1476, 1935, 2190, 2396
PspPI	GGNCC	4 cut(s)	160, 298, 627, 741
PspPPI	RGGWCCY	1 cut(s)	627
PstI	CTGCAG	1 cut(s)	10
PstNI	CAGNNNCTG	2 cut(s)	1622, 1793
PsuI	RGATCY	2 cut(s)	1883, 2428
RsaI	GTAC	9 cut(s)	316, 366, 543, 553, 782, 1686, 1791, 2073, 2077
RsaNI	GTAC	9 cut(s)	315, 365, 542, 552, 781, 1685, 1790, 2072, 2076
RseI	CAYNNNNRTG	1 cut(s)	1265
SaqAI	TTAA	9 cut(s)	138, 150, 500, 879, 900, 924, 1110, 1227, 2000
Sau96I	GGNCC	4 cut(s)	160, 298, 627, 741
SchI	GAGTC	3 cut(s)	1109, 1226, 1814
ScrFI	CCNGG	5 cut(s)	304, 974, 992, 1334, 1632
SexAI	ACCWGGT	1 cut(s)	1630
SfaNI	GCATC	7 cut(s)	85, 396, 644, 849, 962, 1877, 1970
SfcI	CTRYAG	4 cut(s)	6, 102, 546, 1803
SinI	GGWCC	2 cut(s)	627, 741
SmiMI	CAYNNNNRTG	1 cut(s)	1265
SmlI	CTYRAG	4 cut(s)	486, 878, 887, 2110
SmoI	CTYRAG	4 cut(s)	486, 878, 887, 2110
SnaBI	TACGTA	1 cut(s)	2075
SphI	GCATGC	1 cut(s)	1331
SsiI	CCGC	6 cut(s)	183, 883, 1082, 1481, 2086, 2307
SspI	AATATT	1 cut(s)	1604
SspMI	CTAG	7 cut(s)	650, 1368, 1394, 1710, 1881, 2213, 2385
StyD4I	CCNGG	5 cut(s)	302, 972, 990, 1332, 1630
StyI	CCWWGG	2 cut(s)	744, 1195
TaaI	ACNGT	8 cut(s)	741, 807, 1090, 1569, 1789, 1927, 1954, 2494
TaiI	ACGT	3 cut(s)	579, 1686, 2077
TaqI	TCGA	3 cut(s)	1024, 1420, 2468
TaqII	GACCGA	1 cut(s)	1999
TatI	WGTACW	2 cut(s)	364, 780
TauI	GCSGC	3 cut(s)	186, 886, 2310
TfiI	GAWTC	5 cut(s)	646, 935, 1286, 1444, 2462
Tru1I	TTAA	9 cut(s)	138, 150, 500, 879, 900, 924, 1110, 1227, 2000
Tru9I	TTAA	9 cut(s)	138, 150, 500, 879, 900, 924, 1110, 1227, 2000
TscAI	CASTG	9 cut(s)	36, 249, 277, 1348, 1660, 1726, 1840, 1921, 2049
TseFI	GTSAC	3 cut(s)	506, 819, 1759
TseI	GCWGC	8 cut(s)	98, 1796, 1911, 2021, 2156, 2360, 2381, 2401
Tsp45I	GTSAC	3 cut(s)	506, 819, 1759
TspGWI	ACGGA	4 cut(s)	302, 719, 1518, 2499
TspRI	CASTG	9 cut(s)	36, 249, 277, 1348, 1660, 1726, 1840, 1921, 2049
Van91I	CCANNNNNTGG	2 cut(s)	169, 1201
Vha464I	CTTAAG	1 cut(s)	878
VpaK11BI	GGWCC	2 cut(s)	627, 741
VspI	ATTAAT	1 cut(s)	900
XapI	RAATTY	3 cut(s)	109, 166, 206
XceI	RCATGY	3 cut(s)	1139, 1331, 1616
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1437
XmiI	GTMKAC	3 cut(s)	1162, 1818, 2142
XmnI	GAANNNNTTC	2 cut(s)	1443, 1473
XspI	CTAG	7 cut(s)	650, 1368, 1394, 1710, 1881, 2213, 2385
Zsp2I	ATGCAT	3 cut(s)	411, 864, 1324

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.