Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0006119

Physical Location & Seq

Genomic Coordinates Forward (+)

82081845 .. 82086847

Gene Structure 5003 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000036576

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2706 bp

ATGGGGAACCGAAAAGAACGACGTCGTCTTGCCGCCATGTCCAACTCTGGTCGCAGAGTCAAGCTCGATCTCTTCGCCGAACCCCCTGGAGGAGATTTGGGTGGCTCTGCTGAACATGAGGGAGTTGGAGGAGAAGTACATTCGAAAGGCGAGTCTGGGTTACCCAATTCACCATCTTCTTCAGGTCAGCAACCAGAAAATCCACTGCTTTTACTTGGCCAGTATAGTGATGAGGAGTTGGATGATGGCTCAAATAAAACTCTTAGTGATGCTGCTGTAGAGAATTCCTCGCCTCAGAATAATGATGAGGTTAAGAGTGCGCTTAATGAATTGGGCCAGAATTTGGATATCAAAGGCGGCGATGAGCCTGCTTCTCAGAAATTCAATCAAAAGGAAGTGGATACAAACTCTGATACACTGGGTCGTGATCAGAGCATGGAAGAAAGTGATAAAAGAGAAAATGGTGATCTGGCCCCCGGGGATTTTCGTACAGAAGTGGATTTGACGGAGAAAGTTTCTTTGCCTGAAAGTTCTAATGTACAAGTCATTGGTGATGTCAGTTCAGGTTGGAAGATTGTGATGCATGAAGAAAGTAAAAGCTATTATTACTGGAATACTGAAACTGGGGAAACTTCATGGGAAGTGCCTGATGTTTTGGCTCAAGCAACCAAGTTAACCTGTGACCAGCCTTCTGTTGATGAAAAAACAGAGAATGTACCTGTTGGTACACAAGAGTATTCTAATTCTGACGTGATTGAAGGGTCTTCCAATATGGTTCCTCAGGCCATATATGGGGATGGGTCCCAGATGAGTGACTGGAATGTAGGATGCCATAATGGATCAGAGATCGATCCCTCTTCTCATCTTGTAAAATATACAGAGGCTTTGTTAGAGAGATTGAAGTTGCTACAACGGTCCAAGGATCAAGTGCAAGGCGTTGACTGGATCACAAAGTACATTTTGGAAGTTGAAATTAGACTGTTTGATTTGAAGTCACTTTTTTCCTATGGGTCATCTCTGCTTCCATTCTGGATGCATTCTGAAATACAGCTTAAGCGGCTTGAGAGTGGTATTAATGATGAAATGTCCAAGATTGGTAAGTCTGGAGAATCAAATGAAGTTGAGGCATCTCATGCATCATTCTCCCAGGGAGAAATAAATGTCCCGGAAAGCATGGGGTCTAAAACTGAAGTAGATCGAGCAGAAAATAAGCAACTTATTTCTTCTCTAAATGATTATCAGGGTTCTCTTAGTGCGGATACAGTCAATGAAGATCGAGAAGTTAAAGACTCCATTGTAAAAAATGAGCATGTTTCTGCATTTGGCTCCCCAAGTAGACATATGGAGGTTGGTGCAAGTGAACAAGTCCATGGGATAGTAGTTCCTGATGAGTCAACTATTAAGAATGAGGTTTGTGCTGAGGAAGATGTTGACATGGATGTGGACATGGAAGTTGAAGATTCAAATCCAGCAGGAAATACAGCTGTTTCTTATGCATTGCATGCCCAGGAGTTCACTGCAACAGAACAGCCAAATCAGTCTAGTCCACCTTCCCTATATACATCGCTAGTTTCAGAGGATACTTTCACGGTTCGACCTCCTCCAGATGAGGAATGGATTCCTCCACCCCCACCTGATAATGAACAGGTTCCTCCGCCTCCACCTGATGAGCCACCACCTGAACCTCCATATCCTCCACTGCCGTCTTACTCTGAGACAGGTCAACCTCCCTATGCAGAACAGTATAGTTACTCCTATCCAGTTTCCAGTTTTGAATATTATGGACATGCAGTTGCTGAAGCACCTGGTGGTAATTATTATGGACACACTGAAGGATGTCAAGTTGCTATACCCCACGTACCAGTTTACTATGGTGCAGTTCCTAGCACCTACACTGAAAATGCTCAGGTTGTGGCAAATCCTGTTGCGCCTGTCACATATTATGGGCTTCAAGATGGAACAGTACCTGCCGCACCTGTAGTCAGTAGTGTAGACTCACAATTTCACAGCGGGGCTGCTCCTCTTAGCTCTGACAACCTTCCATCTGATCACCCTAGATCTATCAACTCCTTTGAAGGAGCAGGCAGCAGTGGTTCAACTGTGCAGGCTCCATCTACCTCAGCCACAGTCCAAGCACCTGCAACTATTATGGAAAAAGATACTATTGTTCCATTAACTAATTCGGTCTCTACTGCTGCACCTATTCCGGCTACATCAGTGGTTGCGAAGGTTCAATCAAAAGTTGTACGTACTAAAAAGCGGACAATCCCAGCTTCTTCTTCCTTGAGGTCTAATAAGAAAGTCTCCAGTTTGGTAGACAAGTGGAAAGCAGCAAAAGAGGAGTTGCTTGAAGATGAGGAGGAACCTGAGAATACATATGAGTTGCTAGAGAGGAAGCGACAAAGGGAAATAGAGGAATGGTATTCGCAACAAATTACGAGTGGAGAGGCCAAAGATAATGCTAATTTTCAACCTTTAGGTGGCAATTGGCGTGAGAAGGTGAAGCGAAGAAAGGCTCAGTTAGCCCGTGAAGCTGCAGAGACTGCACCTGAAGCACCTAGTAACGGGAACCAGCAGCCCGATCTAACAGAACTTTCAAGGGATCTGCCCTCTGGATGGCAGGTTTACTGGGATGAATCCTCGAAGCAGGTTTATTATGGAAATACTGTTACCTCAGAAACTAGTTGGACGAGACCAACAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0016604 GO:0016607 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0070013

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

902

Amino Acids

98.41

Weight (kDa)

4.52

Isoelectric Point (pI)

54.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WW	PF00397	188 - 216	6.4e-08	WW domain
WW	PF00397	869 - 899	2.9e-09	WW domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006119)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G13225 AT3G13225 AT3G13225
fragaria_vesca	FvH4_3g42241 FvH4_3g42241 FvH4_3g42241 FvH4_3g42241 FvH4_3g42241 FvH4_3g42241 FvH4_3g42241
malus_domestica	MD03G1035400.v1.1 MD11G1037100.v1.1
prunus_persica	Prupe.6G028400_v2.0.a1 Prupe.6G028400_v2.0.a1
pyrus_communis	pycom03g02760 pycom11g03080
rosa_chinensis	RchiOBHm_Chr5g0075571
rosa_laevigata	RLG00000036576
rosa_multiflora	Rmu_sc0003437.1_g000006
rosa_roxburghii	Rroxscaffold_1G00006000
rosa_rugosa	Rorug05G0440600 Rorug05G0440700
rosa_samantha	Rh5AG497800 Rh5BG518600 Rh5CG542300 Rh5DG530500
rosa_wichuraiana	Rw5G046140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2146
AatII	GACGTC	1 cut(s)	25
Acc36I	ACCTGC	4 cut(s)	1975, 2146, 2611, 2638
AccB7I	CCANNNNNTGG	1 cut(s)	343
AccI	GTMKAC	3 cut(s)	1336, 1992, 2316
AciI	CCGC	8 cut(s)	33, 357, 1057, 1256, 1655, 1971, 2010, 2260
AclWI	GGATC	5 cut(s)	845, 847, 930, 953, 2610
AcoI	YGGCCR	1 cut(s)	217
AcsI	RAATTY	3 cut(s)	283, 340, 380
AcuI	CTGAAG	5 cut(s)	165, 1209, 1818, 1851, 2571
AcyI	GRCGYC	1 cut(s)	22
AdeI	CACNNNGTG	1 cut(s)	1808
AfiI	CCNNNNNNNGG	6 cut(s)	89, 343, 792, 2480, 2564, 2616
AflII	CTTAAG	1 cut(s)	1052
AhlI	ACTAGT	1 cut(s)	2681
AjiI	CACGTC	1 cut(s)	751
AjnI	CCWGG	4 cut(s)	85, 1146, 1506, 1804
AluBI	AGCT	7 cut(s)	64, 600, 1051, 1484, 2028, 2273, 2534
AluI	AGCT	7 cut(s)	64, 600, 1051, 1484, 2028, 2273, 2534
Alw26I	GTCTC	5 cut(s)	1709, 2191, 2308, 2534, 2686
AlwI	GGATC	5 cut(s)	845, 847, 930, 953, 2610
AlwNI	CAGNNNCTG	3 cut(s)	1796, 1967, 2543
Ama87I	CYCGRG	1 cut(s)	476
AoxI	GGCC	5 cut(s)	217, 334, 471, 783, 2448
ApeKI	GCWGC	7 cut(s)	272, 2015, 2085, 2195, 2330, 2534, 2575
ApoI	RAATTY	3 cut(s)	283, 340, 380
ArsI	GACNNNNNNTTYG	2 cut(s)	137, 169
AseI	ATTAAT	1 cut(s)	1074
Asp700I	GAANNNNTTC	2 cut(s)	1617, 1647
AspLEI	GCGC	2 cut(s)	322, 1930
AspS9I	GGNCC	4 cut(s)	334, 472, 801, 915
AsuC2I	CCSGG	3 cut(s)	477, 478, 1166
AsuHPI	GGTGA	5 cut(s)	162, 476, 563, 2042, 2512
AsuII	TTCGAA	1 cut(s)	143
AvaI	CYCGRG	1 cut(s)	476
AvaII	GGWCC	2 cut(s)	801, 915
AxyI	CCTNAGG	1 cut(s)	780
BaeI	ACNNNNGTAYC	2 cut(s)	2151, 2184
BalI	TGGCCA	1 cut(s)	219
BbsI	GAAGAC	1 cut(s)	756
BbvCI	CCTCAGC	2 cut(s)	1419, 2119
BbvI	GCAGC	7 cut(s)	259, 2002, 2097, 2182, 2342, 2521, 2587
BccI	CCATC	7 cut(s)	181, 239, 791, 1949, 2050, 2119, 2610
BceAI	ACGGC	1 cut(s)	1687
BcgI	CGANNNNNNTGC	2 cut(s)	350, 384
BciT130I	CCWGG	4 cut(s)	87, 1148, 1508, 1806
BciVI	GTATCC	3 cut(s)	394, 1252, 1573
BclI	TGATCA	2 cut(s)	427, 2047
BcnI	CCSGG	3 cut(s)	477, 478, 1166
BcoDI	GTCTC	5 cut(s)	1709, 2191, 2308, 2534, 2686
BcuI	ACTAGT	1 cut(s)	2681
BfaI	CTAG	7 cut(s)	1542, 1568, 1884, 2055, 2387, 2559, 2682
BfmI	CTRYAG	3 cut(s)	276, 1977, 2535
BfrI	CTTAAG	1 cut(s)	1052
BfuAI	ACCTGC	4 cut(s)	1975, 2146, 2611, 2638
BfuI	GTATCC	3 cut(s)	394, 1252, 1573
BglII	AGATCT	1 cut(s)	2057
Bme1390I	CCNGG	7 cut(s)	87, 477, 478, 1148, 1166, 1508, 1806
Bme18I	GGWCC	2 cut(s)	801, 915
BmeT110I	CYCGRG	1 cut(s)	476
BmgBI	CACGTC	1 cut(s)	751
BmgT120I	GGNCC	4 cut(s)	334, 472, 801, 915
BmrFI	CCNGG	7 cut(s)	87, 477, 478, 1148, 1166, 1508, 1806
BmrI	ACTGGG	3 cut(s)	428, 633, 2638
BmsI	GCATC	6 cut(s)	259, 570, 818, 1023, 1136, 1145
BmuI	ACTGGG	3 cut(s)	428, 633, 2638
BpiI	GAAGAC	1 cut(s)	756
BplI	GAGNNNNNCTC	4 cut(s)	48, 80, 272, 304
BpmI	CTGGAG	4 cut(s)	108, 1125, 1587, 2290
Bpu10I	CCTNAGC	3 cut(s)	1419, 1905, 2119
Bpu14I	TTCGAA	1 cut(s)	143
BpuEI	CTTGAG	3 cut(s)	645, 1082, 2305
BpuMI	CCSGG	3 cut(s)	477, 478, 1166
Bsa29I	ATCGAT	1 cut(s)	849
BsaAI	YACGTR	2 cut(s)	1858, 2249
BsaBI	GATNNNNATC	1 cut(s)	1464
BsaHI	GRCGYC	1 cut(s)	22
BsaI	GGTCTC	2 cut(s)	2191, 2686
BsaJI	CCNNGG	9 cut(s)	85, 475, 476, 477, 918, 1146, 1147, 1369, 1506
BsaXI	ACNNNNNCTCC	2 cut(s)	120, 150
Bsc4I	CCNNNNNNNGG	6 cut(s)	89, 343, 792, 2480, 2564, 2616
Bse21I	CCTNAGG	1 cut(s)	780
Bse3DI	GCAATG	1 cut(s)	1496
Bse8I	GATNNNNATC	1 cut(s)	1464
BseBI	CCWGG	4 cut(s)	87, 1148, 1508, 1806
BseCI	ATCGAT	1 cut(s)	849
BseDI	CCNNGG	9 cut(s)	85, 475, 476, 477, 918, 1146, 1147, 1369, 1506
BseGI	GGATG	8 cut(s)	247, 802, 833, 1038, 1444, 1841, 2621, 2638
BseJI	GATNNNNATC	1 cut(s)	1464
BseLI	CCNNNNNNNGG	6 cut(s)	89, 343, 792, 2480, 2564, 2616
BseMI	GCAATG	1 cut(s)	1496
BseRI	GAGGAG	7 cut(s)	105, 144, 248, 1590, 2010, 2354, 2372
BseXI	GCAGC	7 cut(s)	259, 2002, 2097, 2182, 2342, 2521, 2587
BseYI	CCCAGC	1 cut(s)	2269
BsgI	GTGCAG	4 cut(s)	1896, 2123, 2181, 2529
BshFI	GGCC	5 cut(s)	219, 336, 473, 785, 2450
BshVI	ATCGAT	1 cut(s)	849
BsiHKCI	CYCGRG	1 cut(s)	476
BsiSI	CCGG	3 cut(s)	477, 1166, 2207
BslFI	GGGAC	2 cut(s)	787, 1148
BslI	CCNNNNNNNGG	6 cut(s)	89, 343, 792, 2480, 2564, 2616
BsmAI	GTCTC	5 cut(s)	1709, 2191, 2308, 2534, 2686
BsmFI	GGGAC	2 cut(s)	787, 1148
BsmI	GAATGC	1 cut(s)	1036
BsnI	GGCC	5 cut(s)	219, 336, 473, 785, 2450
Bso31I	GGTCTC	2 cut(s)	2191, 2686
BsoBI	CYCGRG	1 cut(s)	476
Bsp119I	TTCGAA	1 cut(s)	143
Bsp1407I	TGTACA	1 cut(s)	538
Bsp19I	CCATGG	1 cut(s)	1369
BspACI	CCGC	8 cut(s)	33, 357, 1057, 1256, 1655, 1971, 2010, 2260
BspANI	GGCC	5 cut(s)	219, 336, 473, 785, 2450
BspDI	ATCGAT	1 cut(s)	849
BspMAI	CTGCAG	1 cut(s)	2539
BspMI	ACCTGC	4 cut(s)	1975, 2146, 2611, 2638
BspPI	GGATC	5 cut(s)	845, 847, 930, 953, 2610
BspT104I	TTCGAA	1 cut(s)	143
BspTI	CTTAAG	1 cut(s)	1052
BspTNI	GGTCTC	2 cut(s)	2191, 2686
BsrDI	GCAATG	1 cut(s)	1496
BsrGI	TGTACA	1 cut(s)	538
BssECI	CCNNGG	9 cut(s)	85, 475, 476, 477, 918, 1146, 1147, 1369, 1506
BssNI	GRCGYC	1 cut(s)	22
BssT1I	CCWWGG	2 cut(s)	918, 1369
Bst2UI	CCWGG	4 cut(s)	87, 1148, 1508, 1806
Bst4CI	ACNGT	9 cut(s)	915, 981, 1264, 1591, 1743, 1963, 2101, 2128, 2668
Bst6I	CTCTTC	2 cut(s)	77, 862
BstACI	GRCGYC	1 cut(s)	22
BstAFI	CTTAAG	1 cut(s)	1052
BstAPI	GCANNNNNTGC	3 cut(s)	1133, 1502, 2543
BstAUI	TGTACA	1 cut(s)	538
BstBAI	YACGTR	2 cut(s)	1858, 2249
BstBI	TTCGAA	1 cut(s)	143
BstC8I	GCNNGC	4 cut(s)	369, 1503, 2083, 2106
BstDSI	CCRYGG	1 cut(s)	1369
BstEII	GGTNACC	1 cut(s)	159
BstF5I	GGATG	8 cut(s)	247, 802, 833, 1038, 1444, 1841, 2621, 2638
BstHHI	GCGC	2 cut(s)	322, 1930
BstMAI	GTCTC	5 cut(s)	1709, 2191, 2308, 2534, 2686
BstMWI	GCNNNNNNNGC	7 cut(s)	1057, 1133, 1502, 2522, 2531, 2543, 2552
BstNI	CCWGG	4 cut(s)	87, 1148, 1508, 1806
BstNSI	RCATGY	3 cut(s)	1313, 1505, 1790
BstPI	GGTNACC	1 cut(s)	159
BstSCI	CCNGG	7 cut(s)	85, 475, 476, 1146, 1164, 1506, 1804
BstSFI	CTRYAG	3 cut(s)	276, 1977, 2535
BstSNI	TACGTA	1 cut(s)	2249
BstV1I	GCAGC	7 cut(s)	259, 2002, 2097, 2182, 2342, 2521, 2587
BstV2I	GAAGAC	1 cut(s)	756
BstX2I	RGATCY	2 cut(s)	2057, 2602
BstYI	RGATCY	2 cut(s)	2057, 2602
Bsu15I	ATCGAT	1 cut(s)	849
Bsu36I	CCTNAGG	1 cut(s)	780
BsuI	GTATCC	3 cut(s)	394, 1252, 1573
BsuRI	GGCC	5 cut(s)	219, 336, 473, 785, 2450
BsuTUI	ATCGAT	1 cut(s)	849
BtgI	CCRYGG	1 cut(s)	1369
BtgZI	GCGATG	2 cut(s)	375, 1548
BtrI	CACGTC	1 cut(s)	751
BtsCI	GGATG	8 cut(s)	247, 802, 833, 1038, 1444, 1841, 2621, 2638
BtsI	GCAGTG	4 cut(s)	203, 1515, 1697, 2095
BtsIMutI	CAGTG	8 cut(s)	203, 416, 1515, 1697, 1827, 1893, 2095, 2223
BveI	ACCTGC	4 cut(s)	1975, 2146, 2611, 2638
Cac8I	GCNNGC	4 cut(s)	369, 1503, 2083, 2106
CaiI	CAGNNNCTG	3 cut(s)	1796, 1967, 2543
CfoI	GCGC	2 cut(s)	322, 1930
Cfr13I	GGNCC	4 cut(s)	334, 472, 801, 915
Cfr9I	CCCGGG	1 cut(s)	476
ClaI	ATCGAT	1 cut(s)	849
CsiI	ACCWGGT	1 cut(s)	1804
DraIII	CACNNNGTG	1 cut(s)	1808
EaeI	YGGCCR	1 cut(s)	217
Eam1104I	CTCTTC	2 cut(s)	77, 862
EarI	CTCTTC	2 cut(s)	77, 862
EciI	GGCGGA	1 cut(s)	1644
Eco105I	TACGTA	1 cut(s)	2249
Eco130I	CCWWGG	2 cut(s)	918, 1369
Eco31I	GGTCTC	2 cut(s)	2191, 2686
Eco32I	GATATC	1 cut(s)	349
Eco47I	GGWCC	2 cut(s)	801, 915
Eco57I	CTGAAG	5 cut(s)	165, 1209, 1818, 1851, 2571
Eco81I	CCTNAGG	1 cut(s)	780
Eco88I	CYCGRG	1 cut(s)	476
Eco91I	GGTNACC	1 cut(s)	159
EcoO109I	RGGNCCY	1 cut(s)	801
EcoO65I	GGTNACC	1 cut(s)	159
EcoRI	GAATTC	1 cut(s)	283
EcoRII	CCWGG	4 cut(s)	85, 1146, 1506, 1804
EcoRV	GATATC	1 cut(s)	349
EcoT14I	CCWWGG	2 cut(s)	918, 1369
EcoT22I	ATGCAT	4 cut(s)	585, 1038, 1138, 1498
ErhI	CCWWGG	2 cut(s)	918, 1369
FaqI	GGGAC	2 cut(s)	787, 1148
FauI	CCCGC	1 cut(s)	2003
FauNDI	CATATG	2 cut(s)	1341, 2377
FbaI	TGATCA	2 cut(s)	427, 2047
FblI	GTMKAC	3 cut(s)	1336, 1992, 2316
FokI	GGATG	8 cut(s)	254, 809, 840, 1045, 1451, 1848, 2628, 2645
FspBI	CTAG	7 cut(s)	1542, 1568, 1884, 2055, 2387, 2559, 2682
GlaI	GCGC	2 cut(s)	321, 1929
GsaI	CCCAGC	1 cut(s)	2273
GsuI	CTGGAG	4 cut(s)	108, 1125, 1587, 2290
HaeIII	GGCC	5 cut(s)	219, 336, 473, 785, 2450
HapII	CCGG	3 cut(s)	477, 1166, 2207
HhaI	GCGC	2 cut(s)	322, 1930
Hin1I	GRCGYC	1 cut(s)	22
Hin6I	GCGC	2 cut(s)	320, 1928
HinP1I	GCGC	2 cut(s)	320, 1928
HincII	GTYRAC	5 cut(s)	675, 940, 1395, 1432, 1724
HindII	GTYRAC	5 cut(s)	675, 940, 1395, 1432, 1724
HinfI	GANTC	9 cut(s)	57, 152, 1109, 1289, 1391, 1460, 1618, 1994, 2636
HpaI	GTTAAC	1 cut(s)	675
HpaII	CCGG	3 cut(s)	477, 1166, 2207
HphI	GGTGA	5 cut(s)	162, 476, 563, 2042, 2512
Hpy188III	TCNNGA	8 cut(s)	425, 1030, 1104, 1277, 1385, 1604, 1952, 2613
Hpy99I	CGWCG	2 cut(s)	24, 27
HpyAV	CCTTC	8 cut(s)	699, 752, 1560, 1826, 2048, 2069, 2221, 2491
HpyCH4III	ACNGT	9 cut(s)	915, 981, 1264, 1591, 1743, 1963, 2101, 2128, 2668
HpyCH4IV	ACGT	4 cut(s)	22, 750, 1857, 2248
HpyF10VI	GCNNNNNNNGC	7 cut(s)	1057, 1133, 1502, 2522, 2531, 2543, 2552
HpySE526I	ACGT	4 cut(s)	22, 750, 1857, 2248
Hsp92I	GRCGYC	1 cut(s)	22
HspAI	GCGC	2 cut(s)	320, 1928
KflI	GGGWCCC	1 cut(s)	801
Ksp22I	TGATCA	2 cut(s)	427, 2047
KspAI	GTTAAC	1 cut(s)	675
LmnI	GCTCC	4 cut(s)	1331, 2023, 2078, 2113
Lsp1109I	GCAGC	7 cut(s)	259, 2002, 2097, 2182, 2342, 2521, 2587
LweI	GCATC	6 cut(s)	259, 570, 818, 1023, 1136, 1145
MabI	ACCWGGT	1 cut(s)	1804
MaeI	CTAG	7 cut(s)	1542, 1568, 1884, 2055, 2387, 2559, 2682
MaeII	ACGT	4 cut(s)	22, 750, 1857, 2248
MaeIII	GTNAC	8 cut(s)	159, 680, 812, 993, 1748, 1933, 2561, 2668
MfeI	CAATTG	1 cut(s)	2485
MflI	RGATCY	2 cut(s)	2057, 2602
MlsI	TGGCCA	1 cut(s)	219
MluNI	TGGCCA	1 cut(s)	219
MlyI	GAGTC	5 cut(s)	66, 161, 1283, 1400, 1988
MmeI	TCCRAC	5 cut(s)	66, 106, 219, 548, 2666
Mox20I	TGGCCA	1 cut(s)	219
Mph1103I	ATGCAT	4 cut(s)	585, 1038, 1138, 1498
MroXI	GAANNNNTTC	2 cut(s)	1617, 1647
MscI	TGGCCA	1 cut(s)	219
MseI	TTAA	8 cut(s)	312, 324, 674, 1053, 1074, 1284, 1401, 2174
MslI	CAYNNNNRTG	1 cut(s)	1439
Msp20I	TGGCCA	1 cut(s)	219
MspA1I	CMGCKG	2 cut(s)	1484, 2010
MspCI	CTTAAG	1 cut(s)	1052
MspI	CCGG	3 cut(s)	477, 1166, 2207
MspR9I	CCNGG	7 cut(s)	87, 477, 478, 1148, 1166, 1508, 1806
MunI	CAATTG	1 cut(s)	2485
Mva1269I	GAATGC	1 cut(s)	1036
MvaI	CCWGG	4 cut(s)	87, 1148, 1508, 1806
MwoI	GCNNNNNNNGC	7 cut(s)	1057, 1133, 1502, 2522, 2531, 2543, 2552
NciI	CCSGG	3 cut(s)	477, 478, 1166
NcoI	CCATGG	1 cut(s)	1369
NdeI	CATATG	2 cut(s)	1341, 2377
NmuCI	GTSAC	4 cut(s)	680, 812, 993, 1933
NsiI	ATGCAT	4 cut(s)	585, 1038, 1138, 1498
NspI	RCATGY	3 cut(s)	1313, 1505, 1790
NspV	TTCGAA	1 cut(s)	143
PaeI	GCATGC	1 cut(s)	1505
PaqCI	CACCTGC	1 cut(s)	2146
PasI	CCCWGGG	1 cut(s)	1147
PctI	GAATGC	1 cut(s)	1036
PdmI	GAANNNNTTC	2 cut(s)	1617, 1647
PfeI	GAWTC	4 cut(s)	1109, 1460, 1618, 2636
PflFI	GACNNNGTC	1 cut(s)	24
PflMI	CCANNNNNTGG	1 cut(s)	343
PfoI	TCCNGGA	1 cut(s)	1164
PleI	GAGTC	5 cut(s)	65, 160, 1283, 1399, 1988
PpsI	GAGTC	5 cut(s)	65, 160, 1283, 1399, 1988
Ppu21I	YACGTR	2 cut(s)	1858, 2249
PpuMI	RGGWCCY	1 cut(s)	801
PshBI	ATTAAT	1 cut(s)	1074
Psp5II	RGGWCCY	1 cut(s)	801
Psp6I	CCWGG	4 cut(s)	85, 1146, 1506, 1804
PspEI	GGTNACC	1 cut(s)	159
PspFI	CCCAGC	1 cut(s)	2269
PspGI	CCWGG	4 cut(s)	85, 1146, 1506, 1804
PspPI	GGNCC	4 cut(s)	334, 472, 801, 915
PspPPI	RGGWCCY	1 cut(s)	801
PstI	CTGCAG	1 cut(s)	2539
PstNI	CAGNNNCTG	3 cut(s)	1796, 1967, 2543
PsuI	RGATCY	2 cut(s)	2057, 2602
PsyI	GACNNNGTC	1 cut(s)	24
PvuII	CAGCTG	1 cut(s)	1484
RseI	CAYNNNNRTG	1 cut(s)	1439
SaqAI	TTAA	8 cut(s)	312, 324, 674, 1053, 1074, 1284, 1401, 2174
Sau96I	GGNCC	4 cut(s)	334, 472, 801, 915
SchI	GAGTC	5 cut(s)	66, 161, 1283, 1400, 1988
ScrFI	CCNGG	7 cut(s)	87, 477, 478, 1148, 1166, 1508, 1806
SexAI	ACCWGGT	1 cut(s)	1804
SfaNI	GCATC	6 cut(s)	259, 570, 818, 1023, 1136, 1145
SfcI	CTRYAG	3 cut(s)	276, 1977, 2535
SfuI	TTCGAA	1 cut(s)	143
SinI	GGWCC	2 cut(s)	801, 915
SmaI	CCCGGG	1 cut(s)	478
SmiMI	CAYNNNNRTG	1 cut(s)	1439
SmlI	CTYRAG	4 cut(s)	660, 1052, 1061, 2284
SmoI	CTYRAG	4 cut(s)	660, 1052, 1061, 2284
SnaBI	TACGTA	1 cut(s)	2249
SpeI	ACTAGT	1 cut(s)	2681
SphI	GCATGC	1 cut(s)	1505
SsiI	CCGC	8 cut(s)	33, 357, 1057, 1256, 1655, 1971, 2010, 2260
SspI	AATATT	1 cut(s)	1778
SspMI	CTAG	7 cut(s)	1542, 1568, 1884, 2055, 2387, 2559, 2682
StyD4I	CCNGG	7 cut(s)	85, 475, 476, 1146, 1164, 1506, 1804
StyI	CCWWGG	2 cut(s)	918, 1369
TaaI	ACNGT	9 cut(s)	915, 981, 1264, 1591, 1743, 1963, 2101, 2128, 2668
TaiI	ACGT	4 cut(s)	25, 753, 1860, 2251
TaqI	TCGA	7 cut(s)	66, 143, 849, 1198, 1276, 1594, 2642
TaqII	GACCGA	1 cut(s)	2173
TatI	WGTACW	3 cut(s)	136, 538, 954
TauI	GCSGC	4 cut(s)	35, 360, 1060, 1973
TfiI	GAWTC	4 cut(s)	1109, 1460, 1618, 2636
Tru1I	TTAA	8 cut(s)	312, 324, 674, 1053, 1074, 1284, 1401, 2174
Tru9I	TTAA	8 cut(s)	312, 324, 674, 1053, 1074, 1284, 1401, 2174
TscAI	CASTG	8 cut(s)	210, 423, 1522, 1704, 1834, 1900, 2095, 2223
TseFI	GTSAC	4 cut(s)	680, 812, 993, 1933
TseI	GCWGC	7 cut(s)	272, 2015, 2085, 2195, 2330, 2534, 2575
Tsp45I	GTSAC	4 cut(s)	680, 812, 993, 1933
TspDTI	ATGAA	9 cut(s)	342, 600, 624, 714, 1095, 1131, 1284, 1656, 2649
TspGWI	ACGGA	1 cut(s)	521
TspMI	CCCGGG	1 cut(s)	476
TspRI	CASTG	8 cut(s)	210, 423, 1522, 1704, 1834, 1900, 2095, 2223
Tth111I	GACNNNGTC	1 cut(s)	24
Van91I	CCANNNNNTGG	1 cut(s)	343
Vha464I	CTTAAG	1 cut(s)	1052
VpaK11BI	GGWCC	2 cut(s)	801, 915
VspI	ATTAAT	1 cut(s)	1074
XapI	RAATTY	3 cut(s)	283, 340, 380
XceI	RCATGY	3 cut(s)	1313, 1505, 1790
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1611
XmaI	CCCGGG	1 cut(s)	476
XmiI	GTMKAC	3 cut(s)	1336, 1992, 2316
XmnI	GAANNNNTTC	2 cut(s)	1617, 1647
XspI	CTAG	7 cut(s)	1542, 1568, 1884, 2055, 2387, 2559, 2682
ZraI	GACGTC	1 cut(s)	23
Zsp2I	ATGCAT	4 cut(s)	585, 1038, 1138, 1498

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.