Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0006119

Physical Location & Seq

Genomic Coordinates Reverse (-)

3191675 .. 3197248

Gene Structure 5574 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1037100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2808 bp

ATGGGGAAGAGGAAAGAGCGTCGTCTTGCAGCTAAGACCAGCGCTGGTCGCAGAGTCAAGCTCGATCTCTTCGCGGAACCCTCTGGAGATTTGGGTGGCTCTGCTGGACACGATGAACATGGAGACGAAACTAAATCCAAAGGCCATGCTGGGTTACCCAATTCACCATCTTCTTCAGGTCAGAAACCACAAAATCCGCTGCTATTACTTGGGCAATATAGTGATGACGAGTTGGATGATGATTCAAATCATAGCAATGCTTCTGTAGAAAATTCTTCGCCTGACAAAAATGATGAGGTTAAGAGTTCGCTTGGTGAATCTCATCAGCATTTGGATTCTGATGCTAGTGAAGACCTTGCTTCTCAGAAGGTTGAGAAACAGGGAGGTAGTACAAATTCTGCCCAGCAAGATTGTGACAAGAACATGGAGGACAGTGATAAAAGAGAAAATGATGATATCATCTCTAGTGATTTACTTACAGAATCTGATTTGATTGAACAAATCTCTGTTCCTGAAACCTCTAGTGTACAAGTCATTGGAGATGTTAGTTCAGGTTGGAAGATTGTAATGCATGAAGAGAGTAATAGCTATTATTACTGGAATACTGAAACTGGCGAAACTTCATGGGAAGTCCCTGATGTTTTAGCCCAGGAAACAAAGTTCGGTGACCAGGAAACGCCTACTACTGCCGGAACAACAGATAATGTTCCTGTTGGTACAGAAGGGGCTAACGCTTCTGATGTGAAGTTAGATGGTTTCTCTAATTCTGTCACAGTTGAAGGGGACGCCAATATAATCCATCATGGAATAGAATCGCATGGGCATGGGTCCCAAATGGACAAATGGAATCTAGAATTCAATGAAGGAGCCACTCACGATACAATGGCTAATGAAGATTCTGAATCAGCGATTGATCTCTCCTCTGGTCTCATCAAACATTGTGAGGTGTTGTTAGAAAGATTGAAGTCACTACAAGGGTCGAAGGACCCACTGCCAGGTCTCACATGGATCTCAAAGTACACTATGGAAGTTGAGATAAGGCTATTTGATATTAAGTCTCTTTTATCTCATGGTCCATCTCTGCTTCCATTTTGGATGCACTCTGAAAGACAACTTAAACAACTAGAGAGTGCTATTAAAGATGAAACGTCCAAGATTGTTAAATCTCTACGGTCAAATCAAGTTGAGACAACATCTCCATCTTTCTGCCAGGGAGAAAACAATTTTCAGGAAAGCATGGGGTATCAAACTGAAGTAGATCAAGTTGGAACTCTGAACGATCGTCATTTTGCTCCTATTGTTGATACATCAGCGATGGTTTCTAAAGATCAAGATGTTAACAGTTCTGGTGCAAATTCTGAGCATGTGTCTGCATCTGTCTCTCCTCCTAGACATACGAATAGTAGCGAAAGTGAACAAGTCAATGGGGTGGTAGTTCCCGATGACTCGACTACCAAAAATGAGATTTGTTTTGGGGAAGAGGTTGATATGGATGTAGACATGGAAGTTGAAGAGTCAAACTCTGCAGGAGATACAACTATAGAATATGCATTGAATTCCAAGGAGTTTGCTCCACCAGAGCAGCCAATTCATCCTAGTCCACCTTCTATATACACATCTTTAGTGTCAGAGGATACGTTCACTGTTCCACCTCCCCCTGATGAGGAATGGATTCCCCCACCACCACCAGATAATGAACAAATTCCTCCGCCCCCACCTGATGAGCCACCACCTGAGCCCCCATATCCTCCTCATCCATCTTACCATGAAACAGCTCAACCTCCTTATGTAGAGCAATATAATTATTCCTATCCAGCTTCCAGTTTTGGGTATTATGGACATACCGTCACTGAAGCTTCTAACACTAATTTTTTTGGACATCCTGAAGGATCGCAAGTAGTTATACCCCCGGCACCACTTTACTATGGTGCAGTTCCTAGCACCTACATGGATACTGCTCAGGTTGCGGTTAACCCTGTTGAGTCTGTCACATATTATGGGCTTCAAGATGGCATAGTACCTGCTGCTCCTGTAGTCGGTAGTGTAGAGCCGTTGCAGTTTCACAGCAAGTCTGCTCCTCTAAGCTATGGAAACCTGGCATCTGATCAGACTGGATCCATCAACTCCCATTCAGGAGCAGGCAGTAGCGCTTCAAATGTGAATATTAAGTGTTTTTCTGTTGATAGTGGGAATGGTGGGGGATGTATCAAGGTTTCTTCTACCACATCCACAATTCAAGCACCTGCAACTGTTTCTGTGCCATCAACTAATTCAGTCCCTACCGCTGCATCTATTACTGCTACATCAGTGGCTACCAAGGTTCAATCTAAAGTTCCAAGGACGAAAAAGCGGACAATTGCAGCTGCTTCCTCCTTGAGGTCTAATAAGAAAGTGTCTAGTTTAGTAGACAAGTGGAAAGCAGCAAAAGAGGAGTTGCTTGAAGACGAGGAGGAACCTGAAAATGCATATGAGTTGTTAGAGTGGAAGCGACAAAGGGGAATAGAGGAATGGTATGCACAACAAATTACCAGCGGAGAGGCCAAAGATAACGCTAATTTTCAGCGTCTGGGTGGCGACTGGCGTGAGAAAGTGAAGCGAAGAAAAGCTCAATTAGCCCGGGAAGCTGCAAAAACTGCAGCAGCATCTGCATCTGAGGCTCCTACTGATGGGAACAAGCACCCTGATCTGACCGAACAATCAAACGGTCTCCCACCCGGATGGCAGGCCTACTGGGACGAATCTTCAAAGCAGGTTTACTACGGAAATACCGTGACCTCGGAAACTACATGGACGAAACCAACAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0016604 GO:0016607 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0070013

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

936

Amino Acids

101.38

Weight (kDa)

4.62

Isoelectric Point (pI)

47.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WW	PF00397	184 - 212	4.4e-08	WW domain
WW	PF00397	903 - 933	5.4e-10	WW domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006119)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G13225 AT3G13225 AT3G13225
fragaria_vesca	FvH4_3g42241 FvH4_3g42241 FvH4_3g42241 FvH4_3g42241 FvH4_3g42241 FvH4_3g42241 FvH4_3g42241
malus_domestica	MD03G1035400.v1.1 MD11G1037100.v1.1
prunus_persica	Prupe.6G028400_v2.0.a1 Prupe.6G028400_v2.0.a1
pyrus_communis	pycom03g02760 pycom11g03080
rosa_chinensis	RchiOBHm_Chr5g0075571
rosa_laevigata	RLG00000036576
rosa_multiflora	Rmu_sc0003437.1_g000006
rosa_roxburghii	Rroxscaffold_1G00006000
rosa_rugosa	Rorug05G0440600 Rorug05G0440700
rosa_samantha	Rh5AG497800 Rh5BG518600 Rh5CG542300 Rh5DG530500
rosa_wichuraiana	Rw5G046140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2251
Acc36I	ACCTGC	3 cut(s)	2029, 2251, 2740
AccB1I	GGYRCC	1 cut(s)	1912
AccI	GTMKAC	2 cut(s)	1497, 2406
AccII	CGCG	1 cut(s)	74
AciI	CCGC	7 cut(s)	74, 197, 1709, 1967, 2283, 2350, 2532
AclWI	GGATC	4 cut(s)	1016, 1897, 2109, 2122
AcsI	RAATTY	6 cut(s)	271, 394, 854, 1354, 1555, 1701
AcuI	CTGAAG	4 cut(s)	159, 1272, 1872, 1905
AcyI	GRCGYC	1 cut(s)	786
AfaI	GTAC	5 cut(s)	391, 528, 718, 1019, 2019
AfeI	AGCGCT	2 cut(s)	43, 2149
AfiI	CCNNNNNNNGG	6 cut(s)	995, 1663, 1827, 2036, 2376, 2666
AhdI	GACNNNNNGTC	1 cut(s)	1844
AjnI	CCWGG	5 cut(s)	648, 669, 994, 1209, 2094
AloI	GAACNNNNNNTCC	2 cut(s)	644, 676
Alw26I	GTCTC	7 cut(s)	117, 932, 1004, 1062, 1181, 1384, 2711
AlwI	GGATC	4 cut(s)	1016, 1897, 2109, 2122
AlwNI	CAGNNNCTG	3 cut(s)	485, 2566, 2645
Ama87I	CYCGRG	1 cut(s)	2616
Aor51HI	AGCGCT	2 cut(s)	43, 2149
AoxI	GGCC	3 cut(s)	142, 2538, 2724
ApoI	RAATTY	6 cut(s)	271, 394, 854, 1354, 1555, 1701
Asp700I	GAANNNNTTC	2 cut(s)	1671, 1701
AspLEI	GCGC	2 cut(s)	44, 2150
AspS9I	GGNCC	3 cut(s)	828, 985, 1073
AsuC2I	CCSGG	4 cut(s)	1910, 2617, 2618, 2715
AsuHPI	GGTGA	3 cut(s)	156, 326, 677
AvaI	CYCGRG	1 cut(s)	2616
AvaII	GGWCC	3 cut(s)	828, 985, 1073
BamHI	GGATCC	1 cut(s)	2114
BanI	GGYRCC	1 cut(s)	1912
BanII	GRGCYC	1 cut(s)	1740
BbsI	GAAGAC	2 cut(s)	357, 2448
BceAI	ACGGC	1 cut(s)	2035
BciT130I	CCWGG	5 cut(s)	650, 671, 996, 1211, 2096
BciVI	GTATCC	2 cut(s)	1627, 1945
BclI	TGATCA	1 cut(s)	2104
BcnI	CCSGG	4 cut(s)	1910, 2617, 2618, 2715
BcoDI	GTCTC	7 cut(s)	117, 932, 1004, 1062, 1181, 1384, 2711
BfaI	CTAG	9 cut(s)	345, 465, 522, 851, 1124, 1389, 1596, 1938, 2397
BfmI	CTRYAG	5 cut(s)	264, 1524, 1539, 2031, 2634
BfoI	RGCGCY	2 cut(s)	45, 2151
BfuAI	ACCTGC	3 cut(s)	2029, 2251, 2740
BfuI	GTATCC	2 cut(s)	1627, 1945
Bme1390I	CCNGG	9 cut(s)	650, 671, 996, 1211, 1910, 2096, 2617, 2618, 2715
Bme18I	GGWCC	3 cut(s)	828, 985, 1073
BmeRI	GACNNNNNGTC	1 cut(s)	1844
BmeT110I	CYCGRG	1 cut(s)	2616
BmgT120I	GGNCC	3 cut(s)	828, 985, 1073
BmiI	GGNNCC	9 cut(s)	78, 829, 830, 868, 987, 1914, 2116, 2454, 2658
BmrFI	CCNGG	9 cut(s)	650, 671, 996, 1211, 1910, 2096, 2617, 2618, 2715
BmrI	ACTGGG	1 cut(s)	2740
BmsI	GCATC	7 cut(s)	331, 1086, 1382, 2108, 2297, 2651, 2657
BmuI	ACTGGG	1 cut(s)	2740
BpiI	GAAGAC	2 cut(s)	357, 2448
BplI	GAGNNNNNCTC	4 cut(s)	45, 77, 1505, 1537
BpmI	CTGGAG	1 cut(s)	105
Bpu10I	CCTNAGC	2 cut(s)	1734, 1959
BpuEI	CTTGAG	1 cut(s)	2395
BpuMI	CCSGG	4 cut(s)	1910, 2617, 2618, 2715
BsaBI	GATNNNNATC	1 cut(s)	246
BsaHI	GRCGYC	1 cut(s)	786
BsaI	GGTCTC	3 cut(s)	932, 1004, 2711
BsaJI	CCNNGG	8 cut(s)	648, 1210, 1560, 1908, 2316, 2336, 2616, 2775
BsaXI	ACNNNNNCTCC	2 cut(s)	1180, 1210
Bsc4I	CCNNNNNNNGG	6 cut(s)	995, 1663, 1827, 2036, 2376, 2666
Bse1I	ACTGG	6 cut(s)	602, 616, 1821, 2116, 2582, 2735
Bse3DI	GCAATG	1 cut(s)	262
Bse8I	GATNNNNATC	1 cut(s)	246
BseBI	CCWGG	5 cut(s)	650, 671, 996, 1211, 2096
BseDI	CCNNGG	8 cut(s)	648, 1210, 1560, 1908, 2316, 2336, 2616, 2775
BseGI	GGATG	9 cut(s)	241, 1101, 1498, 1591, 1753, 1879, 2207, 2225, 2723
BseJI	GATNNNNATC	1 cut(s)	246
BseLI	CCNNNNNNNGG	6 cut(s)	995, 1663, 1827, 2036, 2376, 2666
BseMI	GCAATG	1 cut(s)	262
BseMII	CTCAG	5 cut(s)	377, 1350, 1725, 1973, 2643
BseNI	ACTGG	6 cut(s)	602, 616, 1821, 2116, 2582, 2735
BseRI	GAGGAG	6 cut(s)	910, 1374, 1740, 2067, 2444, 2462
BseYI	CCCAGC	2 cut(s)	149, 402
BsgI	GTGCAG	1 cut(s)	1950
Bsh1236I	CGCG	1 cut(s)	74
Bsh1285I	CGRYCG	1 cut(s)	1282
BshFI	GGCC	3 cut(s)	144, 2540, 2726
BshNI	GGYRCC	1 cut(s)	1912
BsiEI	CGRYCG	1 cut(s)	1282
BsiHKCI	CYCGRG	1 cut(s)	2616
BsiSI	CCGG	4 cut(s)	690, 1910, 2617, 2715
BslFI	GGGAC	5 cut(s)	617, 797, 814, 2261, 2747
BslI	CCNNNNNNNGG	6 cut(s)	995, 1663, 1827, 2036, 2376, 2666
BsmAI	GTCTC	7 cut(s)	117, 932, 1004, 1062, 1181, 1384, 2711
BsmBI	CGTCTC	1 cut(s)	117
BsmFI	GGGAC	5 cut(s)	617, 797, 814, 2261, 2747
BsnI	GGCC	3 cut(s)	144, 2540, 2726
Bso31I	GGTCTC	3 cut(s)	932, 1004, 2711
BsoBI	CYCGRG	1 cut(s)	2616
Bsp1286I	GDGCHC	1 cut(s)	1740
Bsp1407I	TGTACA	1 cut(s)	526
BspACI	CCGC	7 cut(s)	74, 197, 1709, 1967, 2283, 2350, 2532
BspANI	GGCC	3 cut(s)	144, 2540, 2726
BspCNI	CTCAG	5 cut(s)	376, 1351, 1726, 1972, 2644
BspFNI	CGCG	1 cut(s)	74
BspLI	GGNNCC	9 cut(s)	78, 829, 830, 868, 987, 1914, 2116, 2454, 2658
BspMAI	CTGCAG	2 cut(s)	1528, 2638
BspMI	ACCTGC	3 cut(s)	2029, 2251, 2740
BspPI	GGATC	4 cut(s)	1016, 1897, 2109, 2122
BspT107I	GGYRCC	1 cut(s)	1912
BspTNI	GGTCTC	3 cut(s)	932, 1004, 2711
BsrDI	GCAATG	1 cut(s)	262
BsrGI	TGTACA	1 cut(s)	526
BsrI	ACTGG	6 cut(s)	602, 616, 1821, 2116, 2582, 2735
BssECI	CCNNGG	8 cut(s)	648, 1210, 1560, 1908, 2316, 2336, 2616, 2775
BssNI	GRCGYC	1 cut(s)	786
BssT1I	CCWWGG	3 cut(s)	1560, 2316, 2336
Bst2UI	CCWGG	5 cut(s)	650, 671, 996, 1211, 2096
Bst4CI	ACNGT	9 cut(s)	434, 775, 1173, 1343, 1645, 1846, 2251, 2705, 2770
Bst6I	CTCTTC	5 cut(s)	2, 74, 570, 1473, 1506
BstACI	GRCGYC	1 cut(s)	786
BstAPI	GCANNNNNTGC	2 cut(s)	2633, 2645
BstAUI	TGTACA	1 cut(s)	526
BstC8I	GCNNGC	2 cut(s)	2140, 2724
BstDEI	CTNAG	7 cut(s)	33, 363, 1359, 1734, 1959, 2081, 2652
BstEII	GGTNACC	2 cut(s)	153, 665
BstENI	CCTNNNNNAGG	1 cut(s)	2374
BstF5I	GGATG	9 cut(s)	241, 1101, 1498, 1591, 1753, 1879, 2207, 2225, 2723
BstFNI	CGCG	1 cut(s)	74
BstH2I	RGCGCY	2 cut(s)	45, 2151
BstHHI	GCGC	2 cut(s)	44, 2150
BstMAI	GTCTC	7 cut(s)	117, 932, 1004, 1062, 1181, 1384, 2711
BstMCI	CGRYCG	1 cut(s)	1282
BstMWI	GCNNNNNNNGC	7 cut(s)	48, 1964, 2612, 2621, 2633, 2645, 2654
BstNI	CCWGG	5 cut(s)	650, 671, 996, 1211, 2096
BstNSI	RCATGY	1 cut(s)	1367
BstPI	GGTNACC	2 cut(s)	153, 665
BstSCI	CCNGG	9 cut(s)	648, 669, 994, 1209, 1908, 2094, 2615, 2616, 2713
BstSFI	CTRYAG	5 cut(s)	264, 1524, 1539, 2031, 2634
BstUI	CGCG	1 cut(s)	74
BstV2I	GAAGAC	2 cut(s)	357, 2448
BstX2I	RGATCY	2 cut(s)	1008, 2114
BstXI	CCANNNNNNTGG	1 cut(s)	2718
BstYI	RGATCY	2 cut(s)	1008, 2114
BsuI	GTATCC	2 cut(s)	1627, 1945
BsuRI	GGCC	3 cut(s)	144, 2540, 2726
BtgZI	GCGATG	1 cut(s)	1328
BtsCI	GGATG	9 cut(s)	241, 1101, 1498, 1591, 1753, 1879, 2207, 2225, 2723
BtsI	GCAGTG	1 cut(s)	989
BtsIMutI	CAGTG	5 cut(s)	439, 989, 1641, 1848, 2313
BveI	ACCTGC	3 cut(s)	2029, 2251, 2740
Cac8I	GCNNGC	2 cut(s)	2140, 2724
CaiI	CAGNNNCTG	3 cut(s)	485, 2566, 2645
CfoI	GCGC	2 cut(s)	44, 2150
Cfr13I	GGNCC	3 cut(s)	828, 985, 1073
Cfr9I	CCCGGG	1 cut(s)	2616
CseI	GACGC	3 cut(s)	8, 794, 2552
Csp6I	GTAC	5 cut(s)	390, 527, 717, 1018, 2018
CviQI	GTAC	5 cut(s)	390, 527, 717, 1018, 2018
DdeI	CTNAG	7 cut(s)	33, 363, 1359, 1734, 1959, 2081, 2652
DriI	GACNNNNNGTC	1 cut(s)	1844
Eam1104I	CTCTTC	5 cut(s)	2, 74, 570, 1473, 1506
Eam1105I	GACNNNNNGTC	1 cut(s)	1844
EarI	CTCTTC	5 cut(s)	2, 74, 570, 1473, 1506
EciI	GGCGGA	1 cut(s)	1698
Eco130I	CCWWGG	3 cut(s)	1560, 2316, 2336
Eco147I	AGGCCT	1 cut(s)	2726
Eco24I	GRGCYC	1 cut(s)	1740
Eco31I	GGTCTC	3 cut(s)	932, 1004, 2711
Eco32I	GATATC	1 cut(s)	457
Eco47I	GGWCC	3 cut(s)	828, 985, 1073
Eco47III	AGCGCT	2 cut(s)	43, 2149
Eco57I	CTGAAG	4 cut(s)	159, 1272, 1872, 1905
Eco88I	CYCGRG	1 cut(s)	2616
Eco91I	GGTNACC	2 cut(s)	153, 665
EcoNI	CCTNNNNNAGG	1 cut(s)	2374
EcoO109I	RGGNCCY	2 cut(s)	828, 985
EcoO65I	GGTNACC	2 cut(s)	153, 665
EcoRI	GAATTC	2 cut(s)	854, 1555
EcoRII	CCWGG	5 cut(s)	648, 669, 994, 1209, 2094
EcoRV	GATATC	1 cut(s)	457
EcoT14I	CCWWGG	3 cut(s)	1560, 2316, 2336
EcoT22I	ATGCAT	3 cut(s)	573, 1552, 2467
EcoT38I	GRGCYC	1 cut(s)	1740
ErhI	CCWWGG	3 cut(s)	1560, 2316, 2336
Esp3I	CGTCTC	1 cut(s)	117
FaqI	GGGAC	5 cut(s)	617, 797, 814, 2261, 2747
FauNDI	CATATG	1 cut(s)	2467
FbaI	TGATCA	1 cut(s)	2104
FblI	GTMKAC	2 cut(s)	1497, 2406
FokI	GGATG	9 cut(s)	248, 1108, 1505, 1578, 1740, 1866, 2212, 2214, 2730
FriOI	GRGCYC	1 cut(s)	1740
FspBI	CTAG	9 cut(s)	345, 465, 522, 851, 1124, 1389, 1596, 1938, 2397
GlaI	GCGC	2 cut(s)	43, 2149
GsaI	CCCAGC	2 cut(s)	153, 406
GsuI	CTGGAG	1 cut(s)	105
HaeII	RGCGCY	2 cut(s)	45, 2151
HaeIII	GGCC	3 cut(s)	144, 2540, 2726
HapII	CCGG	4 cut(s)	690, 1910, 2617, 2715
HgaI	GACGC	3 cut(s)	8, 794, 2552
HhaI	GCGC	2 cut(s)	44, 2150
Hin1I	GRCGYC	1 cut(s)	786
Hin6I	GCGC	2 cut(s)	42, 2148
HinP1I	GCGC	2 cut(s)	42, 2148
HincII	GTYRAC	2 cut(s)	1339, 1972
HindII	GTYRAC	2 cut(s)	1339, 1972
HindIII	AAGCTT	1 cut(s)	1854
HpaI	GTTAAC	2 cut(s)	1339, 1972
HpaII	CCGG	4 cut(s)	690, 1910, 2617, 2715
HphI	GGTGA	3 cut(s)	156, 326, 677
Hpy99I	CGWCG	1 cut(s)	24
HpyAV	CCTTC	7 cut(s)	361, 716, 773, 857, 976, 1614, 1880
HpyCH4III	ACNGT	9 cut(s)	434, 775, 1173, 1343, 1645, 1846, 2251, 2705, 2770
HpyCH4IV	ACGT	2 cut(s)	1148, 1637
HpyF10VI	GCNNNNNNNGC	7 cut(s)	48, 1964, 2612, 2621, 2633, 2645, 2654
HpyF3I	CTNAG	7 cut(s)	33, 363, 1359, 1734, 1959, 2081, 2652
HpySE526I	ACGT	2 cut(s)	1148, 1637
Hsp92I	GRCGYC	1 cut(s)	786
HspAI	GCGC	2 cut(s)	42, 2148
KflI	GGGWCCC	1 cut(s)	828
Ksp22I	TGATCA	1 cut(s)	2104
KspAI	GTTAAC	2 cut(s)	1339, 1972
LmnI	GCTCC	7 cut(s)	866, 1297, 1576, 2032, 2080, 2135, 2662
LweI	GCATC	7 cut(s)	331, 1086, 1382, 2108, 2297, 2651, 2657
MaeI	CTAG	9 cut(s)	345, 465, 522, 851, 1124, 1389, 1596, 1938, 2397
MaeII	ACGT	2 cut(s)	1148, 1637
MaeIII	GTNAC	8 cut(s)	153, 413, 665, 769, 966, 1846, 1987, 2770
MfeI	CAATTG	1 cut(s)	2355
MflI	RGATCY	2 cut(s)	1008, 2114
MhlI	GDGCHC	1 cut(s)	1740
MlyI	GAGTC	4 cut(s)	63, 1439, 1523, 1991
MmeI	TCCRAC	3 cut(s)	213, 536, 1246
Mph1103I	ATGCAT	3 cut(s)	573, 1552, 2467
MroXI	GAANNNNTTC	2 cut(s)	1671, 1701
MseI	TTAA	8 cut(s)	300, 1053, 1116, 1137, 1161, 1338, 1971, 2166
MslI	CAYNNNNRTG	4 cut(s)	255, 822, 1946, 2716
MspA1I	CMGCKG	4 cut(s)	199, 2285, 2363, 2532
MspI	CCGG	4 cut(s)	690, 1910, 2617, 2715
MspR9I	CCNGG	9 cut(s)	650, 671, 996, 1211, 1910, 2096, 2617, 2618, 2715
MunI	CAATTG	1 cut(s)	2355
MvaI	CCWGG	5 cut(s)	650, 671, 996, 1211, 2096
MvnI	CGCG	1 cut(s)	74
MwoI	GCNNNNNNNGC	7 cut(s)	48, 1964, 2612, 2621, 2633, 2645, 2654
NciI	CCSGG	4 cut(s)	1910, 2617, 2618, 2715
NdeI	CATATG	1 cut(s)	2467
NlaIV	GGNNCC	9 cut(s)	78, 829, 830, 868, 987, 1914, 2116, 2454, 2658
NmuCI	GTSAC	7 cut(s)	413, 665, 769, 966, 1846, 1987, 2770
NsiI	ATGCAT	3 cut(s)	573, 1552, 2467
NspI	RCATGY	1 cut(s)	1367
PaqCI	CACCTGC	1 cut(s)	2251
PceI	AGGCCT	1 cut(s)	2726
PcsI	WCGNNNNNNNCGW	1 cut(s)	2766
PdmI	GAANNNNTTC	2 cut(s)	1671, 1701
Ple19I	CGATCG	1 cut(s)	1282
PleI	GAGTC	4 cut(s)	62, 1439, 1522, 1990
PpsI	GAGTC	4 cut(s)	62, 1439, 1522, 1990
PpuMI	RGGWCCY	2 cut(s)	828, 985
Psp5II	RGGWCCY	2 cut(s)	828, 985
Psp6I	CCWGG	5 cut(s)	648, 669, 994, 1209, 2094
PspEI	GGTNACC	2 cut(s)	153, 665
PspFI	CCCAGC	2 cut(s)	149, 402
PspGI	CCWGG	5 cut(s)	648, 669, 994, 1209, 2094
PspN4I	GGNNCC	9 cut(s)	78, 829, 830, 868, 987, 1914, 2116, 2454, 2658
PspPI	GGNCC	3 cut(s)	828, 985, 1073
PspPPI	RGGWCCY	2 cut(s)	828, 985
PstI	CTGCAG	2 cut(s)	1528, 2638
PstNI	CAGNNNCTG	3 cut(s)	485, 2566, 2645
PsuI	RGATCY	2 cut(s)	1008, 2114
PvuI	CGATCG	1 cut(s)	1282
PvuII	CAGCTG	1 cut(s)	2363
RsaI	GTAC	5 cut(s)	391, 528, 718, 1019, 2019
RsaNI	GTAC	5 cut(s)	390, 527, 717, 1018, 2018
RseI	CAYNNNNRTG	4 cut(s)	255, 822, 1946, 2716
SaqAI	TTAA	8 cut(s)	300, 1053, 1116, 1137, 1161, 1338, 1971, 2166
Sau96I	GGNCC	3 cut(s)	828, 985, 1073
SchI	GAGTC	4 cut(s)	63, 1439, 1523, 1991
ScrFI	CCNGG	9 cut(s)	650, 671, 996, 1211, 1910, 2096, 2617, 2618, 2715
SduI	GDGCHC	1 cut(s)	1740
SfaNI	GCATC	7 cut(s)	331, 1086, 1382, 2108, 2297, 2651, 2657
SfcI	CTRYAG	5 cut(s)	264, 1524, 1539, 2031, 2634
SinI	GGWCC	3 cut(s)	828, 985, 1073
SmaI	CCCGGG	1 cut(s)	2618
SmiMI	CAYNNNNRTG	4 cut(s)	255, 822, 1946, 2716
SmlI	CTYRAG	1 cut(s)	2374
SmoI	CTYRAG	1 cut(s)	2374
SseBI	AGGCCT	1 cut(s)	2726
SsiI	CCGC	7 cut(s)	74, 197, 1709, 1967, 2283, 2350, 2532
SspI	AATATT	1 cut(s)	2164
SspMI	CTAG	9 cut(s)	345, 465, 522, 851, 1124, 1389, 1596, 1938, 2397
StuI	AGGCCT	1 cut(s)	2726
StyD4I	CCNGG	9 cut(s)	648, 669, 994, 1209, 1908, 2094, 2615, 2616, 2713
StyI	CCWWGG	3 cut(s)	1560, 2316, 2336
TaaI	ACNGT	9 cut(s)	434, 775, 1173, 1343, 1645, 1846, 2251, 2705, 2770
TaiI	ACGT	2 cut(s)	1151, 1640
TaqI	TCGA	3 cut(s)	63, 980, 1448
TaqII	GACCGA	1 cut(s)	2705
TatI	WGTACW	3 cut(s)	389, 526, 1017
Tru1I	TTAA	8 cut(s)	300, 1053, 1116, 1137, 1161, 1338, 1971, 2166
Tru9I	TTAA	8 cut(s)	300, 1053, 1116, 1137, 1161, 1338, 1971, 2166
TscAI	CASTG	5 cut(s)	439, 996, 1648, 1855, 2313
TseFI	GTSAC	7 cut(s)	413, 665, 769, 966, 1846, 1987, 2770
Tsp45I	GTSAC	7 cut(s)	413, 665, 769, 966, 1846, 1987, 2770
TspDTI	ATGAA	9 cut(s)	129, 588, 612, 876, 906, 1158, 1580, 1710, 1782
TspGWI	ACGGA	1 cut(s)	2775
TspMI	CCCGGG	1 cut(s)	2616
TspRI	CASTG	5 cut(s)	439, 996, 1648, 1855, 2313
VpaK11BI	GGWCC	3 cut(s)	828, 985, 1073
XagI	CCTNNNNNAGG	1 cut(s)	2374
XapI	RAATTY	6 cut(s)	271, 394, 854, 1354, 1555, 1701
XbaI	TCTAGA	1 cut(s)	850
XceI	RCATGY	1 cut(s)	1367
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1002
XmaI	CCCGGG	1 cut(s)	2616
XmiI	GTMKAC	2 cut(s)	1497, 2406
XmnI	GAANNNNTTC	2 cut(s)	1671, 1701
XspI	CTAG	9 cut(s)	345, 465, 522, 851, 1124, 1389, 1596, 1938, 2397
Zsp2I	ATGCAT	3 cut(s)	573, 1552, 2467

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.